BLASTX nr result

ID: Alisma22_contig00017437 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00017437
         (373 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ONK79327.1 uncharacterized protein A4U43_C01F5240 [Asparagus off...    56   9e-07
NP_001168550.1 F-box/FBD/LRR-repeat protein [Zea mays] XP_008648...    56   1e-06
XP_008220745.1 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570...    55   3e-06
XP_008220744.1 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570...    55   3e-06

>ONK79327.1 uncharacterized protein A4U43_C01F5240 [Asparagus officinalis]
          Length = 415

 Score = 56.2 bits (134), Expect = 9e-07
 Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
 Frame = -2

Query: 372 LKELDIYINFKIPSDAHGALCLFRSSPALMRLRVWTTGRGITIPASDSEEAT----DIWN 205
           +K L I INF+   +   A C+FRSSPA+ +L       GIT   SD + AT      W 
Sbjct: 287 VKYLIIDINFEATQEMLAAFCMFRSSPAVQKL-------GITA-ISDKKIATISSDGFWE 338

Query: 204 TAAAENCCFPRLKHLVINTMRGSDSEVAFLRFVFQQAPVLAELNIE 67
              + NC F +LK + +    G  SE+  + FV   +PVL  L+I+
Sbjct: 339 GEESFNCTFSQLKVVEVTDFSGITSELKLIEFVLANSPVLERLHIK 384


>NP_001168550.1 F-box/FBD/LRR-repeat protein [Zea mays] XP_008648083.1 PREDICTED:
           uncharacterized protein LOC100382330 isoform X1 [Zea
           mays] ACN28634.1 unknown [Zea mays] AQK86011.1
           F-box/FBD/LRR-repeat protein [Zea mays] AQK86012.1
           F-box/FBD/LRR-repeat protein [Zea mays] AQK86013.1
           F-box/FBD/LRR-repeat protein [Zea mays]
          Length = 424

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 32/106 (30%), Positives = 53/106 (50%)
 Frame = -2

Query: 372 LKELDIYINFKIPSDAHGALCLFRSSPALMRLRVWTTGRGITIPASDSEEATDIWNTAAA 193
           L E+ + ++     +A+ A CLF+ +P L R+ +    RG + P S        W++   
Sbjct: 301 LTEITLELDLGNLKEANAAHCLFQIAPNLRRMELQLMHRGYSAPTSS------FWDSVDR 354

Query: 192 ENCCFPRLKHLVINTMRGSDSEVAFLRFVFQQAPVLAELNIEGCSK 55
           ++C F  L  +V+N   GS +E  FL+ +   APVL    IE  +K
Sbjct: 355 QDCLFKNLYTVVMNNFTGSCAESGFLKLLLDDAPVLRSARIEDNNK 400


>XP_008220745.1 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X2
           [Prunus mume]
          Length = 421

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
 Frame = -2

Query: 372 LKELDIYINFKIPSDAHGALCLFRSSPALMRLRVWTTGRGITIPASDSEEATDIWNTAAA 193
           L  L I I+F    +   A+CL RSSPAL  L +       T   + + +  D WN   A
Sbjct: 295 LNYLSIRISFTDSDEISTAVCLLRSSPALQELEILVRPEDTTCAGTVNFQLDDDWNGPIA 354

Query: 192 ENCCFPRLKHLVINTMRGSDSEVAFLRFVFQQAPVLAELNIE----GCSKEIIK 43
                 RL+H+ IN + G+  E+ F+R +   +P L ++ ++     C  EI+K
Sbjct: 355 ------RLRHVKINGIAGTKPELEFIRLLLLGSPALEKMTVKPASVTCGWEIVK 402


>XP_008220744.1 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X1
           [Prunus mume]
          Length = 422

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 4/114 (3%)
 Frame = -2

Query: 372 LKELDIYINFKIPSDAHGALCLFRSSPALMRLRVWTTGRGITIPASDSEEATDIWNTAAA 193
           L  L I I+F    +   A+CL RSSPAL  L +       T   + + +  D WN   A
Sbjct: 296 LNYLSIRISFTDSDEISTAVCLLRSSPALQELEILVRPEDTTCAGTVNFQLDDDWNGPIA 355

Query: 192 ENCCFPRLKHLVINTMRGSDSEVAFLRFVFQQAPVLAELNIE----GCSKEIIK 43
                 RL+H+ IN + G+  E+ F+R +   +P L ++ ++     C  EI+K
Sbjct: 356 ------RLRHVKINGIAGTKPELEFIRLLLLGSPALEKMTVKPASVTCGWEIVK 403


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