BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00017338
         (1407 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABD28426.2 RNA-directed DNA polymerase (Reverse transcriptase) [...    56   4e-09
JAT45180.1 Putative ribonuclease H protein At1g65750, partial [A...    59   8e-06

>ABD28426.2 RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 55.8 bits (133), Expect(3) = 4e-09
 Identities = 66/250 (26%), Positives = 108/250 (43%), Gaps = 25/250 (10%)
 Frame = +1

Query: 235 PINA*KFIGDKG--FLVNIFLE*DFVNRKMV*D*GNSTVVPTHKNKQDIQNCTIHKNIKF 408
           PI   K +GD+G  +L N+F E     +KM  +   ST++P  KNK DIQNC  ++ IK 
Sbjct: 166 PIEVWKSLGDRGTVWLANLFNE-IIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGIKL 224

Query: 409 MLH*N------LGRGLLKWTEIYNTRVS-----SPVDQVWRLKEVLLI*NRSSYGFHW-- 549
           M H        + R L K T + + +       S ++ ++ L+ V+          H   
Sbjct: 225 MSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHLVF 284

Query: 550 --SEMSCNPAPRRTTLMNFGEKRDSVEFIKVMKDIYDSDLLV*GVQDESQ*DFYITSRET 723
              E   +  PR        +KR  + +I+ +KD+Y+        QD +  DF IT    
Sbjct: 285 FDLEKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIGLH 344

Query: 724 EGQL*VSISCFSFGWDDNIF---IGDFIGPCHL-----LLILYNKS*VNYMLELWRNTLE 879
           +G    +++ + F    ++    I +    C L     +L+  ++  VN  LE WR  LE
Sbjct: 345 QGS---TLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGRLETWRQALE 401

Query: 880 PKYLTLVNTK 909
                L  +K
Sbjct: 402 AYGFRLSRSK 411



 Score = 29.6 bits (65), Expect(3) = 4e-09
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 1095 PLRLEGMLYKN-ICPATLYGSEC*AVVIMSNN 1187
            PL+L G  Y+  + PA LYG+EC AV     N
Sbjct: 484  PLKLTGKFYRTAVRPALLYGTECWAVKSQHEN 515



 Score = 24.6 bits (52), Expect(3) = 4e-09
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 974  IKSFCYLGLFIYTGGEVQDDASQGI 1048
            +  F YLG F+   GE++ D S  I
Sbjct: 440  VTRFKYLGSFVQNDGEIEADVSHRI 464


>JAT45180.1 Putative ribonuclease H protein At1g65750, partial [Anthurium
            amnicola]
          Length = 502

 Score = 59.3 bits (142), Expect = 8e-06
 Identities = 26/65 (40%), Positives = 36/65 (55%)
 Frame = +2

Query: 1181 EQQSIHVISWEFICRPNKEGCLGICRIRDLLMLVSHRTIWKLATQKDS*WIQWVHRRYFV 1360
            E +S H+ISW+ IC+P  EG LGI RI D         +W +  ++ S W+ WV+  Y  
Sbjct: 289  EDKSFHMISWKTICKPKDEGGLGIRRIGDWHKACVLAQLWDILQKRKSLWVDWVYASYLA 348

Query: 1361 YTSTW 1375
             TS W
Sbjct: 349  KTSIW 353