BLASTX nr result
ID: Alisma22_contig00017330
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00017330
(649 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA96779.1 retrotransposon protein, putative, Ty1-copia subclass... 127 4e-30
EEC80481.1 hypothetical protein OsI_22711 [Oryza sativa Indica G... 122 9e-30
ABA98555.1 retrotransposon protein, putative, Ty1-copia subclass... 125 2e-29
CAE04541.2 OSJNBa0040D17.9 [Oryza sativa Japonica Group] 124 4e-29
AAT39267.1 putative polyprotein [Oryza sativa Japonica Group] AA... 123 7e-29
CAE02325.2 OSJNBb0112E13.7 [Oryza sativa Japonica Group] 123 7e-29
CAE05795.1 OSJNBb0046K02.5 [Oryza sativa Japonica Group] 123 7e-29
ABA99751.1 retrotransposon protein, putative, Ty1-copia subclass... 123 7e-29
AAT93940.1 putative polyprotein [Oryza sativa Japonica Group] 123 7e-29
ABA95768.1 retrotransposon protein, putative, Ty1-copia subclass... 123 9e-29
ABA99473.2 retrotransposon protein, putative, Ty1-copia subclass... 123 9e-29
ABA99836.1 retrotransposon protein, putative, Ty1-copia subclass... 123 9e-29
CAD40198.2 OSJNBb0043H09.7 [Oryza sativa Japonica Group] 123 9e-29
AAR01682.1 putative gag and pol protein [Oryza sativa Japonica G... 123 9e-29
AAR01716.1 putative Gag and Pol polyprotein [Oryza sativa Japoni... 123 9e-29
AAK84454.1 putative polyprotein [Oryza sativa Japonica Group] 123 9e-29
AAK71544.1 putative polyprotein [Oryza sativa Japonica Group] 123 9e-29
ABA97938.1 retrotransposon protein, putative, Ty1-copia subclass... 123 9e-29
ABA91250.1 retrotransposon protein, putative, Ty1-copia subclass... 123 9e-29
CAE03086.1 OSJNBa0017B10.1 [Oryza sativa Japonica Group] CAD4141... 123 9e-29
>ABA96779.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1468
Score = 127 bits (318), Expect = 4e-30
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 11/221 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 237 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 296
Query: 473 GDKSKPSFKGRKHHXXXXXXNSD----QGEKCVCFVCDKPGHLANVCRFCKGQRKQNVQA 306
+KSK +K ++ ++ Q E+ CFVC + GHLA C CKG + Q
Sbjct: 297 QNKSKGKYKAQQTTNFKKQKKNNINPNQDER-TCFVCGQVGHLARKCLQCKGMKAPAGQT 355
Query: 305 PKNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAES 126
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ
Sbjct: 356 SKSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVAR 411
Query: 125 GKVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
G + G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 412 GSTVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 451
>EEC80481.1 hypothetical protein OsI_22711 [Oryza sativa Indica Group]
Length = 360
Score = 122 bits (306), Expect = 9e-30
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 9/219 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KL SW+ F L+H + S+ L+ SL +E++ RE+D S P+ N+V
Sbjct: 21 IIAKLTLSWRGFGTALKHNRQEYSVEGLIASLDVEEKAREKDAASKGDGGQPTANVVHKT 80
Query: 473 GDKSKPSFKGRK--HHXXXXXXNSDQGEKCVCFVCDKPGHLANVCRFCKGQRKQNVQAPK 300
+KSK +K ++ + N+ ++ CFVC +PGHLA C KG + Q K
Sbjct: 81 QNKSKGKYKAQQTPNFKKKNNNNNPNQDERTCFVCGQPGHLARKCPQRKGMKAPAGQTSK 140
Query: 299 NSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESGK 120
++ V + G S L P+I + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 141 SANVTIGNTG--DGSGYGNL--PTIFSVNQSTNWWVDTGANIHVCADISLFSSYQVARGS 196
Query: 119 VIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + + G VD+K TSG +++L +VQHVPS
Sbjct: 197 TVLMG-NGSHLYVHGVGTVDLKFTSGKIVQLKNVQHVPS 234
>ABA98555.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1361
Score = 125 bits (313), Expect = 2e-29
Identities = 75/220 (34%), Positives = 119/220 (54%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 235 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 294
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 295 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 354
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K+++V + +G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 355 KSADVTIGNIG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 410
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 411 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 449
>CAE04541.2 OSJNBa0040D17.9 [Oryza sativa Japonica Group]
Length = 1319
Score = 124 bits (311), Expect = 4e-29
Identities = 76/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L PS+ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PSVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>AAT39267.1 putative polyprotein [Oryza sativa Japonica Group] AAT85181.1
putative polyprotein [Oryza sativa Japonica Group]
Length = 1297
Score = 123 bits (309), Expect = 7e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKEKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQHKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>CAE02325.2 OSJNBb0112E13.7 [Oryza sativa Japonica Group]
Length = 1342
Score = 123 bits (309), Expect = 7e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSNP-----SVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKSDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGLGTVDLKFTSGKIVQLKNVQHVPS 364
>CAE05795.1 OSJNBb0046K02.5 [Oryza sativa Japonica Group]
Length = 1356
Score = 123 bits (309), Expect = 7e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSNP-----SVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKSDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGLGTVDLKFTSGKIVQLKNVQHVPS 364
>ABA99751.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 123 bits (309), Expect = 7e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 635 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 694
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 695 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCSQVGHLARKCPQRKGMKAPAGQTS 754
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 755 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 810
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 811 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 849
>AAT93940.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1861
Score = 123 bits (309), Expect = 7e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 564 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 623
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 624 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 683
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 684 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWIDTGANIHVCADISLFSSYQVARG 739
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 740 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 778
>ABA95768.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1151
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 21 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 80
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 81 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 140
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 141 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 196
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 197 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 235
>ABA99473.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1287
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 111 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 170
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 171 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 230
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 231 KSANVTIGNTG--DGSGYGNL--PAVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 286
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 287 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 325
>ABA99836.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1302
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGAALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>CAD40198.2 OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>AAR01682.1 putative gag and pol protein [Oryza sativa Japonica Group]
Length = 1302
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>AAR01716.1 putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>AAK84454.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>AAK71544.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1308
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>ABA97938.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>ABA91250.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364
>CAE03086.1 OSJNBa0017B10.1 [Oryza sativa Japonica Group] CAD41412.2
OSJNBb0078D11.12 [Oryza sativa Japonica Group]
Length = 1320
Score = 123 bits (308), Expect = 9e-29
Identities = 75/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Frame = -3
Query: 632 LIEKLPPSWKDFARTLRHIQGNMSMASLVKSLQIEDRHREQDRKSN-----PSVNMV--I 474
+I KLPPSW+ F L+H + S+ L+ SL +E++ RE+D S S N+V
Sbjct: 150 IIAKLPPSWRSFGTALKHKRQEYSVEGLIASLDVEEKAREKDAASKGDGGQSSANVVHKA 209
Query: 473 GDKSKPSFKGRKHHXXXXXXNSDQG---EKCVCFVCDKPGHLANVCRFCKGQRKQNVQAP 303
+KSK +K ++ ++ ++ CFVC + GHLA C KG + Q
Sbjct: 210 QNKSKGKYKAQQTTNFKKQKKNNNNPNQDERTCFVCGQVGHLARKCPQRKGMKAPAGQTS 269
Query: 302 KNSEVNMITVGAVPSSSIERLENPSILFADLSSDWYLDSGATCHICFDQSLFSTYQAESG 123
K++ V + G S L P++ + S++W++D+GA H+C D SLFS+YQ G
Sbjct: 270 KSANVTIGNTG--DGSGYGNL--PTVFSVNQSTNWWVDTGANVHVCADISLFSSYQVARG 325
Query: 122 KVIKWGDHSSTIPIAGFRRVDIKLTSGNVLRLHDVQHVPS 3
+ G + S + G VD+K TSG +++L +VQHVPS
Sbjct: 326 STVLMG-NGSHASVHGVGTVDLKFTSGKIVQLKNVQHVPS 364