BLASTX nr result
ID: Alisma22_contig00016393
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00016393
(1048 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT44858.1 DNA mismatch repair protein Msh3 [Anthurium amnicola] 76 3e-12
XP_010255451.1 PREDICTED: DNA mismatch repair protein MSH3 [Nelu... 77 1e-11
KMZ71178.1 DNA mismatch repair protein mutS [Zostera marina] 76 2e-11
OAY30385.1 hypothetical protein MANES_14G026600 [Manihot esculenta] 76 2e-11
OAY30383.1 hypothetical protein MANES_14G026600 [Manihot esculenta] 76 2e-11
OAY30384.1 hypothetical protein MANES_14G026600 [Manihot esculenta] 76 2e-11
XP_009385995.1 PREDICTED: DNA mismatch repair protein MSH3 [Musa... 75 3e-11
XP_008806883.1 PREDICTED: DNA mismatch repair protein MSH3 [Phoe... 74 8e-11
XP_002510803.1 PREDICTED: DNA mismatch repair protein MSH3 [Rici... 74 8e-11
EAY96093.1 hypothetical protein OsI_17969 [Oryza sativa Indica G... 72 8e-11
XP_010934727.2 PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repa... 74 1e-10
ONK79683.1 uncharacterized protein A4U43_C01F8980 [Asparagus off... 72 3e-10
XP_015633466.1 PREDICTED: DNA mismatch repair protein MSH3 isofo... 72 6e-10
CAE03438.1 OSJNBa0032F06.21 [Oryza sativa Japonica Group] 72 6e-10
XP_012090271.1 PREDICTED: DNA mismatch repair protein MSH3 isofo... 72 6e-10
XP_018506240.1 PREDICTED: DNA mismatch repair protein MSH3 isofo... 72 6e-10
XP_008376561.1 PREDICTED: DNA mismatch repair protein MSH3 isofo... 72 6e-10
XP_008376559.1 PREDICTED: DNA mismatch repair protein MSH3 isofo... 72 6e-10
EEE61928.1 hypothetical protein OsJ_16670 [Oryza sativa Japonica... 72 7e-10
EEC78276.1 hypothetical protein OsI_17972 [Oryza sativa Indica G... 72 7e-10
>JAT44858.1 DNA mismatch repair protein Msh3 [Anthurium amnicola]
Length = 247
Score = 75.9 bits (185), Expect = 3e-12
Identities = 41/74 (55%), Positives = 51/74 (68%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCA 868
SYLT E + E S S + D DITFLYK++PG SDKSFG+NVA++AQLP+SCI+ A
Sbjct: 93 SYLTSENAVENIISDS-SASEWDQFDITFLYKVIPGASDKSFGLNVARLAQLPSSCINRA 151
Query: 867 TEMAEKMERGLKMR 826
MA K+E L R
Sbjct: 152 AAMAAKLELYLNKR 165
>XP_010255451.1 PREDICTED: DNA mismatch repair protein MSH3 [Nelumbo nucifera]
Length = 1119
Score = 77.0 bits (188), Expect = 1e-11
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCA 868
SYL +K++ + S D DITFLYK++PG+SDKSFG+NVA++AQLP SCIS A
Sbjct: 953 SYLASQKTSVSDFKSDQSVGNVDHGDITFLYKVIPGLSDKSFGLNVAQLAQLPPSCISRA 1012
Query: 867 TEMAEKMERGLKMRTRGSLIQ 805
MA K+E + +R L Q
Sbjct: 1013 AVMAAKLEAVVSVRVETRLAQ 1033
>KMZ71178.1 DNA mismatch repair protein mutS [Zostera marina]
Length = 1095
Score = 76.3 bits (186), Expect = 2e-11
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = -2
Query: 1047 SYLTVEKSTE-ESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISC 871
SYLT + S + D+ +ITFLYK+VPGVSDKSFGINVA++AQLP SCI+
Sbjct: 952 SYLTSKNSLSLVGSEYDTCAESLDESNITFLYKVVPGVSDKSFGINVARLAQLPTSCIAR 1011
Query: 870 ATEMAEKMERGLKMRTRGSLIQ 805
A MA KME + +R + L Q
Sbjct: 1012 AIFMATKMEEEVNIREQTKLSQ 1033
>OAY30385.1 hypothetical protein MANES_14G026600 [Manihot esculenta]
Length = 1101
Score = 76.3 bits (186), Expect = 2e-11
Identities = 47/113 (41%), Positives = 65/113 (57%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCA 868
SYLT EK+T+ K D ++T+LYKLVPGVS++SFG VA++AQLP+SCI A
Sbjct: 950 SYLTSEKNTDAMDS------KFCDENVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRA 1003
Query: 867 TEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENLQT 709
T MA K+E + R L + + L +D+E D I ES ++ T
Sbjct: 1004 TIMAAKLELAVSRRMGSKL----DKRQLLEVLRSDLEHETRDCISESSDSFPT 1052
>OAY30383.1 hypothetical protein MANES_14G026600 [Manihot esculenta]
Length = 1103
Score = 76.3 bits (186), Expect = 2e-11
Identities = 47/113 (41%), Positives = 65/113 (57%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCA 868
SYLT EK+T+ K D ++T+LYKLVPGVS++SFG VA++AQLP+SCI A
Sbjct: 950 SYLTSEKNTDAMDS------KFCDENVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRA 1003
Query: 867 TEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENLQT 709
T MA K+E + R L + + L +D+E D I ES ++ T
Sbjct: 1004 TIMAAKLELAVSRRMGSKL----DKRQLLEVLRSDLEHETRDCISESSDSFPT 1052
>OAY30384.1 hypothetical protein MANES_14G026600 [Manihot esculenta]
Length = 1127
Score = 76.3 bits (186), Expect = 2e-11
Identities = 47/113 (41%), Positives = 65/113 (57%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCA 868
SYLT EK+T+ K D ++T+LYKLVPGVS++SFG VA++AQLP+SCI A
Sbjct: 950 SYLTSEKNTDAMDS------KFCDENVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRA 1003
Query: 867 TEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENLQT 709
T MA K+E + R L + + L +D+E D I ES ++ T
Sbjct: 1004 TIMAAKLELAVSRRMGSKL----DKRQLLEVLRSDLEHETRDCISESSDSFPT 1052
>XP_009385995.1 PREDICTED: DNA mismatch repair protein MSH3 [Musa acuminata subsp.
malaccensis]
Length = 1077
Score = 75.5 bits (184), Expect = 3e-11
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKV-KTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISC 871
SYLT +K E ++ SIS K ++TFLYKLV G SDKSFG+NVAK+AQLPASCI+
Sbjct: 910 SYLTSQKPLEITESESISSADKLCHKEVTFLYKLVTGASDKSFGLNVAKLAQLPASCIAR 969
Query: 870 ATEMAEKME 844
A MA K+E
Sbjct: 970 AAVMAAKLE 978
>XP_008806883.1 PREDICTED: DNA mismatch repair protein MSH3 [Phoenix dactylifera]
Length = 1033
Score = 74.3 bits (181), Expect = 8e-11
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Frame = -2
Query: 1047 SYLTVEKS---TEESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCI 877
SYLT +K T+ + S+ + +D ++TFLYK+V G SDKSFG+NVA++AQLP+SCI
Sbjct: 881 SYLTSQKPFKLTDSKSKFSVGE--SDQREVTFLYKVVLGASDKSFGLNVARLAQLPSSCI 938
Query: 876 SCATEMAEKMERGLK-------MRTRGSLIQCTNAKPLSNFWDTDMEDY-QADTIKESCE 721
+ A MA K+E + + + Q + SN ++ + + + E C
Sbjct: 939 ARAAIMAAKLEAEVSEWVGNGARNPKETPTQNEVGRNYSNSTGFSFREHDRYEKLGEVCH 998
Query: 720 NLQTFXXXXXXXXXXXXXLEDMDSYSVLQILKDGREMALDML 595
NL + L+D + ++L LKD RE+AL M+
Sbjct: 999 NLLS---------CIKSALDDAEPTNILHTLKDARELALKMI 1031
>XP_002510803.1 PREDICTED: DNA mismatch repair protein MSH3 [Ricinus communis]
EEF51405.1 DNA mismatch repair protein MSH3, putative
[Ricinus communis]
Length = 1100
Score = 74.3 bits (181), Expect = 8e-11
Identities = 45/116 (38%), Positives = 62/116 (53%), Gaps = 16/116 (13%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCA 868
SYL EK+ + + K D+ D+T+LYKLVPGVS++SFG VA++AQLP SCI A
Sbjct: 950 SYLMAEKNNDATDS------KFDNEDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCIERA 1003
Query: 867 TEMAEKMERGLKMRTRGSLIQCTNAKPL----------------SNFWDTDMEDYQ 748
T MA ++E + R R L + K L NF D +E+Y+
Sbjct: 1004 TVMAARLEEAISCRIRNRLDKSQLLKALQIDQLQEIQEKIPESPGNFHDKRIENYE 1059
>EAY96093.1 hypothetical protein OsI_17969 [Oryza sativa Indica Group]
Length = 237
Score = 71.6 bits (174), Expect = 8e-11
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHS-ISKVKTDDC-DITFLYKLVPGVSDKSFGINVAKIAQLPASCIS 874
SYL K E + R I+ +T D +ITFLYKLV G SD+SFG+NVA +AQLP+SCI
Sbjct: 93 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 152
Query: 873 CATEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENL 715
A+ MA K+++ L R + + + S+ + + YQ + E+C +
Sbjct: 153 RASVMAAKLQQELSEREKNKFCRLMDVPRESSPKELCAQPYQG--LAEACHRI 203
>XP_010934727.2 PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3
[Elaeis guineensis]
Length = 1115
Score = 73.9 bits (180), Expect = 1e-10
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKV-KTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISC 871
SYLT +K + + S V + D ++TFLYK+V G SDKSFG+NVA++AQLP+SCI+
Sbjct: 952 SYLTSQKPFKITDSKSEFSVGEPDQGEVTFLYKVVCGASDKSFGLNVARLAQLPSSCIAR 1011
Query: 870 ATEMAEKMERGLKMRTRGSL------IQCTNAKPLSNFWDTDMEDY-QADTIKESCENLQ 712
A +A K+E L R Q + S +Y + + E C NL
Sbjct: 1012 AAIVAAKLEAELSERVGNGAQNIEMPAQNERGRNYSKSTGFSYSEYDRFENFGEVCHNLL 1071
Query: 711 TFXXXXXXXXXXXXXLEDMDSYSVLQILKDGREMALDMLRKQKISES 571
+ L+D + ++L LKD RE+AL + Q S++
Sbjct: 1072 S---------CIKSALDDAEPMNILYALKDARELALKTVSGQPSSDT 1109
>ONK79683.1 uncharacterized protein A4U43_C01F8980 [Asparagus officinalis]
Length = 1047
Score = 72.4 bits (176), Expect = 3e-10
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKVKTDD-CDITFLYKLVPGVSDKSFGINVAKIAQLPASCISC 871
SYLT E+ E ++ V++ D ++TFLYK+ PG SDKSFG+NVA++AQLP+SCI+
Sbjct: 939 SYLTSERPLEITELELEVPVRSQDQAEVTFLYKIAPGASDKSFGLNVARLAQLPSSCIAR 998
Query: 870 ATEMAEKME 844
A MA K+E
Sbjct: 999 AAAMAAKLE 1007
>XP_015633466.1 PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Oryza sativa
Japonica Group]
Length = 1085
Score = 71.6 bits (174), Expect = 6e-10
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHS-ISKVKTDDC-DITFLYKLVPGVSDKSFGINVAKIAQLPASCIS 874
SYL K E + R I+ +T D +ITFLYKLV G SD+SFG+NVA +AQLP+SCI
Sbjct: 941 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 1000
Query: 873 CATEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENL 715
A+ MA K+++ L R + + + S+ + + YQ + E+C +
Sbjct: 1001 RASVMAAKLQQELSEREKNKFCRLMDVPRESSPKELCAQPYQG--LAEACHRI 1051
>CAE03438.1 OSJNBa0032F06.21 [Oryza sativa Japonica Group]
Length = 1085
Score = 71.6 bits (174), Expect = 6e-10
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHS-ISKVKTDDC-DITFLYKLVPGVSDKSFGINVAKIAQLPASCIS 874
SYL K E + R I+ +T D +ITFLYKLV G SD+SFG+NVA +AQLP+SCI
Sbjct: 941 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 1000
Query: 873 CATEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENL 715
A+ MA K+++ L R + + + S+ + + YQ + E+C +
Sbjct: 1001 RASVMAAKLQQELSEREKNKFCRLMDVPRESSPKELCAQPYQG--LAEACHRI 1051
>XP_012090271.1 PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Jatropha
curcas] KDP22293.1 hypothetical protein JCGZ_26124
[Jatropha curcas]
Length = 1105
Score = 71.6 bits (174), Expect = 6e-10
Identities = 43/114 (37%), Positives = 65/114 (57%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHSISKVKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCA 868
SYLT EK+ ++ K D+ D+T+LYKLVPGVS +SFG VA++AQLP+SCI A
Sbjct: 954 SYLTSEKNL------GVTGSKFDNEDVTYLYKLVPGVSGRSFGFKVAQLAQLPSSCIRRA 1007
Query: 867 TEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENLQTF 706
+ MA ++E + R L++ +T D Q +T +++ E+ F
Sbjct: 1008 SVMAARLEMVVSHRMEDKLVR-------RQLLETPTSDQQQETWEKTSESPDCF 1054
>XP_018506240.1 PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Pyrus x
bretschneideri] XP_009371322.2 PREDICTED: DNA mismatch
repair protein MSH3 isoform X2 [Pyrus x bretschneideri]
Length = 1122
Score = 71.6 bits (174), Expect = 6e-10
Identities = 39/93 (41%), Positives = 60/93 (64%)
Frame = -2
Query: 990 VKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCATEMAEKMERGLKMRTRGSL 811
+++++ D+T+LYKLVPGVS++SFG VA++AQLP+SCI AT MA +++ + RTR
Sbjct: 982 IQSENQDVTYLYKLVPGVSERSFGFKVAELAQLPSSCIRRATVMAARLDAVVSSRTRNR- 1040
Query: 810 IQCTNAKPLSNFWDTDMEDYQADTIKESCENLQ 712
+ K L TD + + D + ES E L+
Sbjct: 1041 ---DDKKWLLKSLPTDQKQEEQDVMLESPECLR 1070
>XP_008376561.1 PREDICTED: DNA mismatch repair protein MSH3 isoform X2 [Malus
domestica]
Length = 1122
Score = 71.6 bits (174), Expect = 6e-10
Identities = 39/93 (41%), Positives = 60/93 (64%)
Frame = -2
Query: 990 VKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCATEMAEKMERGLKMRTRGSL 811
+++++ D+T+LYKLVPGVS++SFG VA++AQLP+SCI AT MA ++E + RTR
Sbjct: 982 IQSENQDVTYLYKLVPGVSERSFGFKVAELAQLPSSCIRRATVMAARLEAVVSSRTRNK- 1040
Query: 810 IQCTNAKPLSNFWDTDMEDYQADTIKESCENLQ 712
+ K L T+ + + D + ES E L+
Sbjct: 1041 ---DDKKWLLKSLPTEQKQEEQDVMLESPECLR 1070
>XP_008376559.1 PREDICTED: DNA mismatch repair protein MSH3 isoform X1 [Malus
domestica]
Length = 1142
Score = 71.6 bits (174), Expect = 6e-10
Identities = 39/93 (41%), Positives = 60/93 (64%)
Frame = -2
Query: 990 VKTDDCDITFLYKLVPGVSDKSFGINVAKIAQLPASCISCATEMAEKMERGLKMRTRGSL 811
+++++ D+T+LYKLVPGVS++SFG VA++AQLP+SCI AT MA ++E + RTR
Sbjct: 982 IQSENQDVTYLYKLVPGVSERSFGFKVAELAQLPSSCIRRATVMAARLEAVVSSRTRNK- 1040
Query: 810 IQCTNAKPLSNFWDTDMEDYQADTIKESCENLQ 712
+ K L T+ + + D + ES E L+
Sbjct: 1041 ---DDKKWLLKSLPTEQKQEEQDVMLESPECLR 1070
>EEE61928.1 hypothetical protein OsJ_16670 [Oryza sativa Japonica Group]
Length = 2115
Score = 71.6 bits (174), Expect = 7e-10
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHS-ISKVKTDDC-DITFLYKLVPGVSDKSFGINVAKIAQLPASCIS 874
SYL K E + R I+ +T D +ITFLYKLV G SD+SFG+NVA +AQLP+SCI
Sbjct: 793 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 852
Query: 873 CATEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENL 715
A+ MA K+++ L R + + + S+ + + YQ + E+C +
Sbjct: 853 RASVMAAKLQQELSEREKNKFCRLMDVPRESSPKELCAQPYQG--LAEACHRI 903
>EEC78276.1 hypothetical protein OsI_17972 [Oryza sativa Indica Group]
Length = 2246
Score = 71.6 bits (174), Expect = 7e-10
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Frame = -2
Query: 1047 SYLTVEKSTEESQRHS-ISKVKTDDC-DITFLYKLVPGVSDKSFGINVAKIAQLPASCIS 874
SYL K E + R I+ +T D +ITFLYKLV G SD+SFG+NVA +AQLP+SCI
Sbjct: 944 SYLATRKLLEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIE 1003
Query: 873 CATEMAEKMERGLKMRTRGSLIQCTNAKPLSNFWDTDMEDYQADTIKESCENL 715
A+ MA K+++ L R + + + S+ + + YQ + E+C +
Sbjct: 1004 RASVMAAKLQQELSEREKNKFCRLMDVPRESSPKELCAQPYQG--LAEACHRI 1054