BLASTX nr result

ID: Alisma22_contig00016339 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00016339
         (956 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006857398.1 PREDICTED: pre-mRNA-splicing factor SLU7 [Amborel...    59   5e-06
XP_010675980.1 PREDICTED: pre-mRNA-splicing factor SLU7-like [Be...    58   8e-06
XP_014517022.1 PREDICTED: pre-mRNA-splicing factor SLU7-A-like [...    58   8e-06
XP_008235683.1 PREDICTED: pre-mRNA-splicing factor SLU7-A-like [...    58   8e-06
XP_011083314.1 PREDICTED: pre-mRNA-splicing factor SLU7-A-like [...    58   1e-05

>XP_006857398.1 PREDICTED: pre-mRNA-splicing factor SLU7 [Amborella trichopoda]
           ERN18865.1 hypothetical protein AMTR_s00067p00141610
           [Amborella trichopoda]
          Length = 535

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 48/135 (35%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
 Frame = -2

Query: 358 GPWWKEFQWGYKCRSLTTRNSYCKGVC*TCC*SD*GQFGP*RGCRM*SCGEG--R*EPRN 185
           G WWK+ QWGYKC   T +NSYC G+                  R  +  E   + E +N
Sbjct: 403 GSWWKDHQWGYKCCKQTIKNSYCIGLVGIEAAEGANDLMKENMARKEALEEKPVQTEEKN 462

Query: 184 LGELG--ACDDLVIDQK*LEGG---TEKRRMIEEPESGMVRSLHKTW---------EAYR 47
           L   G  A  DLV+DQK L       E+RR  E+ E    R  +  W         EAYR
Sbjct: 463 LATWGSDAPSDLVLDQKRLSESLKKEEERRREEKDE--RKRKYNVKWNDEVTAEDMEAYR 520

Query: 46  MKRIRRDDPI*YLFH 2
           MK+I  DDP+    H
Sbjct: 521 MKKIHHDDPMKDFLH 535


>XP_010675980.1 PREDICTED: pre-mRNA-splicing factor SLU7-like [Beta vulgaris subsp.
           vulgaris]
          Length = 531

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 43/126 (34%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
 Frame = -2

Query: 358 GPWWKEFQWGYKCRSLTTRNSYCKGVC*TCC*SD*GQFGP*RGCRM*SCGEGR*EPRNLG 179
           G WW +FQWGY C   T RNSYC G          G        R       R E + L 
Sbjct: 404 GSWWSDFQWGYICCKQTIRNSYCTGAAGIQAAEASGDLMKTNIAR--KQNPARTEEKKLA 461

Query: 178 ELGA--CDDLVIDQK*L-EGGTEKRRMIEEPESGMVRSLHKTW---------EAYRMKRI 35
             GA   +DLV+D+K L E   ++    +E +    R  + ++         EAYRMKR+
Sbjct: 462 TWGAEVPEDLVLDEKKLAEAFNKENSRKKEDKDDRKRKYNVSYDDNVTQEEMEAYRMKRV 521

Query: 34  RRDDPI 17
             DDPI
Sbjct: 522 HHDDPI 527


>XP_014517022.1 PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Vigna radiata var.
           radiata]
          Length = 536

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 44/133 (33%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
 Frame = -2

Query: 358 GPWWKEFQWGYKCRSLTTRNSYCKGVC*TCC*SD*GQFGP*RGCRM*SCGE--GR*EPRN 185
           G WWK+ QWGYKC   T RNSYC G                   R  +  E     E + 
Sbjct: 402 GSWWKDHQWGYKCCKQTIRNSYCTGAAGIEAAEAASDLMKANIARKEAATEDPAPVEEKK 461

Query: 184 LGELGA--CDDLVIDQK*LEGGTEKRRMIE-EPESGMVRSLHKTW---------EAYRMK 41
           L   GA   D LV+D+K L    +K  + + E +    R  + TW         EAYRMK
Sbjct: 462 LATWGADVPDGLVLDEKLLADALKKEDLRKREEKDERKRKYNVTWNDEVTEEDMEAYRMK 521

Query: 40  RIRRDDPI*YLFH 2
           ++  DDP+    H
Sbjct: 522 KVHHDDPMKDFLH 534


>XP_008235683.1 PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Prunus mume]
          Length = 538

 Score = 58.2 bits (139), Expect = 8e-06
 Identities = 42/128 (32%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
 Frame = -2

Query: 358 GPWWKEFQWGYKCRSLTTRNSYCKGVC*TCC*SD*GQFGP*RGCRM*SCGE--GR*EPRN 185
           G WWK+ QWGY+C    TRNSYC G          G+       R  + G+     E + 
Sbjct: 406 GSWWKDHQWGYRCCKQLTRNSYCTGAAGIEAAEAAGELMKANIARKEAIGDMPAPAEEKR 465

Query: 184 LGELGA--CDDLVIDQK*LEGGTEKR-RMIEEPESGMVRSLHKTW---------EAYRMK 41
           L   G    DDLV+D+K L    +K      E      R  +  W         EAYRMK
Sbjct: 466 LATWGTDIPDDLVLDEKLLADALKKEDARKREVRDERKRKYNVKWNDEVTAEDMEAYRMK 525

Query: 40  RIRRDDPI 17
           ++  DDP+
Sbjct: 526 KVHHDDPM 533


>XP_011083314.1 PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Sesamum indicum]
          Length = 432

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 47/135 (34%), Positives = 57/135 (42%), Gaps = 16/135 (11%)
 Frame = -2

Query: 358 GPWWKEFQWGYKCRSLTTRNSYCKGVC*TCC*SD*GQFGP*RGCRM*SCGE--GR*EPRN 185
           G WWK+ QWGYKC   T RNSYC G                   R  +  E     E + 
Sbjct: 300 GSWWKDHQWGYKCCKQTVRNSYCTGAAGIEAAEAAADLMKANIARKEATEEAPAAAEEKR 359

Query: 184 LGELGA--CDDLVIDQK*LEGGTEK---RRMIEEPESGMVRSLHKTW---------EAYR 47
           L   G+   DDLV+DQ+ L    +K   RR  E  E    R  +  W         EAYR
Sbjct: 360 LATWGSEVPDDLVLDQEKLAEALKKEDERRREERDE--RKRKYNVKWNDEVTAEDMEAYR 417

Query: 46  MKRIRRDDPI*YLFH 2
           MKR+  DDP+    H
Sbjct: 418 MKRVHHDDPMKDFLH 432


Top