BLASTX nr result

ID: Alisma22_contig00016091 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00016091
         (338 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDY16797.1 BnaA09g05850D [Brassica napus]                              65   3e-10
XP_009112006.1 PREDICTED: probable mediator of RNA polymerase II...    65   5e-10
XP_013661106.1 PREDICTED: probable mediator of RNA polymerase II...    65   5e-10
CDY16177.1 BnaA09g29110D [Brassica napus]                              60   8e-10
CDX85040.1 BnaC05g20150D [Brassica napus]                              60   9e-10
CDY53146.1 BnaAnng12050D [Brassica napus]                              60   1e-09
CDY36721.1 BnaC02g31420D [Brassica napus]                              59   3e-09
XP_013669234.1 PREDICTED: probable mediator of RNA polymerase II...    60   3e-09
CDY31803.1 BnaC01g27590D [Brassica napus]                              58   4e-09
CDY07820.1 BnaC03g48020D [Brassica napus]                              59   5e-09
EMS50129.1 Heat shock cognate 70 kDa protein 1 [Triticum urartu]       62   7e-09
XP_018451023.1 PREDICTED: probable mediator of RNA polymerase II...    62   9e-09
CDX89756.1 BnaC03g46700D [Brassica napus]                              57   2e-08
CDY02232.1 BnaA03g39350D [Brassica napus]                              57   2e-08
CDY15422.1 BnaC04g42010D [Brassica napus] CDY10446.1 BnaCnng0347...    60   3e-08
CDY40360.1 BnaA10g27080D [Brassica napus]                              60   3e-08
XP_013655628.1 PREDICTED: probable mediator of RNA polymerase II...    60   3e-08
XP_013586681.1 PREDICTED: probable mediator of RNA polymerase II...    60   3e-08
XP_009115390.1 PREDICTED: probable mediator of RNA polymerase II...    60   3e-08
XP_013665543.1 PREDICTED: probable mediator of RNA polymerase II...    60   4e-08

>CDY16797.1 BnaA09g05850D [Brassica napus]
          Length = 264

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G D+DD PPA+GGAGPKIEEVD
Sbjct: 230 IAKMYQGAGGEAAGMDDDDAPPASGGAGPKIEEVD 264


>XP_009112006.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 37e [Brassica rapa]
          Length = 517

 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G D+DD PPA+GGAGPKIEEVD
Sbjct: 483 IAKMYQGAGGEAAGMDDDDAPPASGGAGPKIEEVD 517


>XP_013661106.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 37e [Brassica napus]
          Length = 647

 Score = 65.1 bits (157), Expect = 5e-10
 Identities = 29/35 (82%), Positives = 31/35 (88%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G D+DD PPA+GGAGPKIEEVD
Sbjct: 613 IAKMYQGAGGEAAGMDDDDAPPASGGAGPKIEEVD 647


>CDY16177.1 BnaA09g29110D [Brassica napus]
          Length = 72

 Score = 60.1 bits (144), Expect = 8e-10
 Identities = 29/36 (80%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPG-ADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G AD+D+ PPA GGAGPKIEEVD
Sbjct: 37  IAKMYQGAGGEAGGPADDDEAPPAAGGAGPKIEEVD 72


>CDX85040.1 BnaC05g20150D [Brassica napus]
          Length = 76

 Score = 60.1 bits (144), Expect = 9e-10
 Identities = 29/36 (80%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPG-ADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G AD+D+ PPA GGAGPKIEEVD
Sbjct: 41  IAKMYQGAGGEAGGPADDDEAPPAAGGAGPKIEEVD 76


>CDY53146.1 BnaAnng12050D [Brassica napus]
          Length = 71

 Score = 59.7 bits (143), Expect = 1e-09
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G  +D+ PPA GGAGPKIEEVD
Sbjct: 37  IAKMYQGAGGEAGGPADDEAPPAAGGAGPKIEEVD 71


>CDY36721.1 BnaC02g31420D [Brassica napus]
          Length = 78

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%), Gaps = 3/38 (7%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGA---DEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G+   D+D+ PP+TGGAGPKIEEVD
Sbjct: 41  IAKMYQGAGGEAGGSAGMDDDEAPPSTGGAGPKIEEVD 78


>XP_013669234.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 37e [Brassica napus]
          Length = 109

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G  +D+ PPA GGAGPKIEEVD
Sbjct: 75  IAKMYQGAGGEAGGPADDEAPPAAGGAGPKIEEVD 109


>CDY31803.1 BnaC01g27590D [Brassica napus]
          Length = 71

 Score = 58.2 bits (139), Expect = 4e-09
 Identities = 27/35 (77%), Positives = 28/35 (80%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G   D+ PPA GGAGPKIEEVD
Sbjct: 37  IAKMYQGAGGEAGGPAVDEAPPAAGGAGPKIEEVD 71


>CDY07820.1 BnaC03g48020D [Brassica napus]
          Length = 93

 Score = 58.5 bits (140), Expect = 5e-09
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G  +D+ PP  GGAGPKIEEVD
Sbjct: 59  IAKMYQGAGGESSGPADDEAPPTAGGAGPKIEEVD 93


>EMS50129.1 Heat shock cognate 70 kDa protein 1 [Triticum urartu]
          Length = 736

 Score = 62.0 bits (149), Expect = 7e-09
 Identities = 30/36 (83%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGA-DEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAG +M GA DEDD PPA GGAGPKIEEVD
Sbjct: 701 IAKMYQGAGADMAGAMDEDDAPPAAGGAGPKIEEVD 736


>XP_018451023.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 37e [Raphanus sativus]
          Length = 647

 Score = 61.6 bits (148), Expect = 9e-09
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G D+D+ PP+ GGAGPKIEEVD
Sbjct: 613 IAKMYQGAGGEAGGMDDDEAPPSAGGAGPKIEEVD 647


>CDX89756.1 BnaC03g46700D [Brassica napus]
          Length = 73

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = +1

Query: 1   IAKMYQGAGGEM---PGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE     G D+D+ PP+ GGAGPKIEEVD
Sbjct: 36  IAKMYQGAGGEAGGPAGMDDDEAPPSAGGAGPKIEEVD 73


>CDY02232.1 BnaA03g39350D [Brassica napus]
          Length = 73

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = +1

Query: 1   IAKMYQGAGGEM---PGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE     G D+D+ PP+ GGAGPKIEEVD
Sbjct: 36  IAKMYQGAGGEAGGPSGMDDDEAPPSAGGAGPKIEEVD 73


>CDY15422.1 BnaC04g42010D [Brassica napus] CDY10446.1 BnaCnng03470D [Brassica
           napus]
          Length = 260

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G D DD PPA+GGAGPKIEEVD
Sbjct: 227 IAKMYQGAGGEAAGMD-DDAPPASGGAGPKIEEVD 260


>CDY40360.1 BnaA10g27080D [Brassica napus]
          Length = 260

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G D DD PPA+GGAGPKIEEVD
Sbjct: 227 IAKMYQGAGGEAAGMD-DDAPPASGGAGPKIEEVD 260


>XP_013655628.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 37e [Brassica napus] XP_013655629.1 PREDICTED:
           probable mediator of RNA polymerase II transcription
           subunit 37e [Brassica napus]
          Length = 649

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 29/36 (80%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPG-ADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G AD+D+ PPA GGAGPKIEEVD
Sbjct: 614 IAKMYQGAGGEAGGPADDDEAPPAAGGAGPKIEEVD 649


>XP_013586681.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 37e [Brassica oleracea var. oleracea]
          Length = 649

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 29/36 (80%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPG-ADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G AD+D+ PPA GGAGPKIEEVD
Sbjct: 614 IAKMYQGAGGEAGGPADDDEAPPAAGGAGPKIEEVD 649


>XP_009115390.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 37e [Brassica rapa]
          Length = 649

 Score = 60.1 bits (144), Expect = 3e-08
 Identities = 29/36 (80%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPG-ADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G AD+D+ PPA GGAGPKIEEVD
Sbjct: 614 IAKMYQGAGGEAGGPADDDEAPPAAGGAGPKIEEVD 649


>XP_013665543.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 37e [Brassica napus]
          Length = 377

 Score = 59.7 bits (143), Expect = 4e-08
 Identities = 29/35 (82%), Positives = 30/35 (85%)
 Frame = +1

Query: 1   IAKMYQGAGGEMPGADEDDVPPATGGAGPKIEEVD 105
           IAKMYQGAGGE  G D DD PPA+GGAGPKIEEVD
Sbjct: 344 IAKMYQGAGGEAAGMD-DDAPPASGGAGPKIEEVD 377


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