BLASTX nr result
ID: Alisma22_contig00015468
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00015468
(1035 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KMZ68176.1 DNA-directed RNA polymerase [Zostera marina] 446 e-144
XP_020112440.1 DNA-directed RNA polymerases IV and V subunit 2-l... 424 e-135
OAY64687.1 DNA-directed RNA polymerases IV and V subunit 2, part... 424 e-135
XP_008784482.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 420 e-134
XP_009413518.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 419 e-134
XP_010937061.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 419 e-134
XP_012703111.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 416 e-132
OEL29148.1 DNA-directed RNA polymerases IV and V subunit 2 [Dich... 412 e-131
XP_009787512.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 410 e-130
XP_009787511.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 410 e-130
XP_019252729.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 409 e-130
XP_016481856.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 409 e-130
XP_009605686.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 409 e-130
XP_016433825.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 410 e-130
AQK46533.1 DNA-directed RNA polymerases IV and V subunit 2 [Zea ... 397 e-130
ONM13139.1 nuclear RNA polymerase D2/E2 [Zea mays] 397 e-129
EMS61833.1 DNA-directed RNA polymerase D subunit 2a [Triticum ur... 406 e-128
JAT57709.1 DNA-directed RNA polymerase D subunit 2a [Anthurium a... 405 e-128
KQJ88133.1 hypothetical protein BRADI_4g15740 [Brachypodium dist... 400 e-128
XP_006652896.1 PREDICTED: DNA-directed RNA polymerases IV and V ... 405 e-128
>KMZ68176.1 DNA-directed RNA polymerase [Zostera marina]
Length = 1188
Score = 446 bits (1148), Expect = e-144
Identities = 222/345 (64%), Positives = 269/345 (77%), Gaps = 1/345 (0%)
Frame = +3
Query: 3 LCEEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRL 182
L E+ E+IMGRIPVMVKS LCWL+ + +DC FD GGYF+IKGAEK FIAQEKLC+TRL
Sbjct: 155 LSEDTHEVIMGRIPVMVKSNLCWLNILDKTDCHFDYGGYFVIKGAEKVFIAQEKLCSTRL 214
Query: 183 WVNKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALG 359
WV+ +P W V YW KR RVFV + E D VG L+V+FLYTS+ IW++FFALG
Sbjct: 215 WVSNNPSWKVAYWSRLKRQRVFVMI-EDHLSFDGHVGSPNLSVNFLYTSIPIWVLFFALG 273
Query: 360 ASSDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYP 539
ASSDKE+F+ I+ A+V+N L A+I AE C+GFR G+AL +++ I+ T++P
Sbjct: 274 ASSDKEIFDFIEFQEFDADANVLNTLLASISNAEEVCEGFRQEGKALEYIDKAIKGTKFP 333
Query: 540 PSENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGD 719
PSE+++ECI+ YLFS I G ++KA FLG+MV +LLLA GKRKC+NKDD RNKR LAG+
Sbjct: 334 PSEDVDECISTYLFSTINGLKEKACFLGYMVNTLLLAHSGKRKCDNKDDIRNKRFDLAGE 393
Query: 720 LLTQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPS 899
LL +ELRMHIRHAERRM R MQRDL+GD D+ IERY+DASIITNGL KAFSTG+W HP
Sbjct: 394 LLARELRMHIRHAERRMVRAMQRDLHGDNDLKLIERYMDASIITNGLIKAFSTGVWTHPL 453
Query: 900 KIYEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
KI EKCSGVVA L+R NPLQ IS+LRKTRQQV+YAGK GDARYPN
Sbjct: 454 KITEKCSGVVATLRRTNPLQMISDLRKTRQQVAYAGKSGDARYPN 498
>XP_020112440.1 DNA-directed RNA polymerases IV and V subunit 2-like [Ananas comosus]
XP_020112441.1 DNA-directed RNA polymerases IV and V
subunit 2-like [Ananas comosus]
Length = 1201
Score = 424 bits (1090), Expect = e-135
Identities = 209/343 (60%), Positives = 264/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
+E+KEI +GR+PVMV+S LCWL+ SDCLFD GGYF+IKG EK FIAQE+ C TRLWV
Sbjct: 193 DEKKEITIGRLPVMVRSNLCWLNTLGKSDCLFDSGGYFLIKGMEKTFIAQEQRCLTRLWV 252
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
P W+V Y KR R+++KL E K ++ G +V+++ FLY + IW++FFALGAS
Sbjct: 253 TDRPVWTVSYISEIKRKRIYIKLLESPK-AEGSNGRRVISLYFLYATAPIWLMFFALGAS 311
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPS 545
SDKE+FEMIDL+ A +VN+L ATI+ + Q +GFR +A ++N I+ ++PPS
Sbjct: 312 SDKEIFEMIDLE--DCSASIVNILLATIKETDEQFEGFRKEDKAREYINEQIKNAKFPPS 369
Query: 546 ENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLL 725
E+ +E ++KYLF + GHRQKAL LG+MVK LLLAF GKRKC+NKDDFRNKRL LAG+LL
Sbjct: 370 ESFDEYVSKYLFPGVSGHRQKALSLGYMVKCLLLAFSGKRKCDNKDDFRNKRLDLAGELL 429
Query: 726 TQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKI 905
+ELR HIRHAE+RM + MQRDL GDRD+ IERY DASIITNG+++AFSTG WCHP K
Sbjct: 430 ARELRAHIRHAEKRMVKTMQRDLYGDRDLQLIERYWDASIITNGINRAFSTGAWCHPYKR 489
Query: 906 YEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SG+VA L+R NPLQ +S+LRKTRQQV+YAGK GDARYPN
Sbjct: 490 TERISGIVATLRRTNPLQMMSDLRKTRQQVAYAGKAGDARYPN 532
>OAY64687.1 DNA-directed RNA polymerases IV and V subunit 2, partial [Ananas
comosus]
Length = 1228
Score = 424 bits (1090), Expect = e-135
Identities = 209/343 (60%), Positives = 264/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
+E+KEI +GR+PVMV+S LCWL+ SDCLFD GGYF+IKG EK FIAQE+ C TRLWV
Sbjct: 201 DEKKEITIGRLPVMVRSNLCWLNTLGKSDCLFDSGGYFLIKGMEKTFIAQEQRCLTRLWV 260
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
P W+V Y KR R+++KL E K ++ G +V+++ FLY + IW++FFALGAS
Sbjct: 261 TDRPVWTVSYISEIKRKRIYIKLLESPK-AEGSNGRRVISLYFLYATAPIWLMFFALGAS 319
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPS 545
SDKE+FEMIDL+ A +VN+L ATI+ + Q +GFR +A ++N I+ ++PPS
Sbjct: 320 SDKEIFEMIDLE--DCSASIVNILLATIKETDEQFEGFRKEDKAREYINEQIKNAKFPPS 377
Query: 546 ENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLL 725
E+ +E ++KYLF + GHRQKAL LG+MVK LLLAF GKRKC+NKDDFRNKRL LAG+LL
Sbjct: 378 ESFDEYVSKYLFPGVSGHRQKALSLGYMVKCLLLAFSGKRKCDNKDDFRNKRLDLAGELL 437
Query: 726 TQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKI 905
+ELR HIRHAE+RM + MQRDL GDRD+ IERY DASIITNG+++AFSTG WCHP K
Sbjct: 438 ARELRAHIRHAEKRMVKTMQRDLYGDRDLQLIERYWDASIITNGINRAFSTGAWCHPYKR 497
Query: 906 YEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SG+VA L+R NPLQ +S+LRKTRQQV+YAGK GDARYPN
Sbjct: 498 TERISGIVATLRRTNPLQMMSDLRKTRQQVAYAGKAGDARYPN 540
>XP_008784482.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Phoenix dactylifera]
Length = 1189
Score = 420 bits (1079), Expect = e-134
Identities = 211/354 (59%), Positives = 268/354 (75%), Gaps = 12/354 (3%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
+++KEI +GRIPVM++SKLCWL + SDCLFD GGYF+IKG EK FIAQE+ R+WV
Sbjct: 170 DKKKEIAIGRIPVMIRSKLCWLHTLDKSDCLFDSGGYFLIKGMEKTFIAQEQRHLARVWV 229
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
P W+V Y KR R+++KL E K ++ F GGKV+ FLY ++ +WI+FFALGAS
Sbjct: 230 TDKPSWTVSYLSEMKRKRIYIKLVEAPK-AEGFSGGKVVNFFFLYATIPVWIMFFALGAS 288
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGG-----------RALNHVN 512
SDKEVFEMIDL + AD++N++ AT++ A+ + FR +A ++VN
Sbjct: 289 SDKEVFEMIDLG--ESSADLINIILATVKNADEHYKKFREDADEHDKNFRRVDKAQDYVN 346
Query: 513 NMIQKTRYPPSENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFR 692
+ ++ +++PPSE+ +E + K+LF I GHRQKALFLG+MVK LLLA GKRKC+NKDDFR
Sbjct: 347 SQVKVSKFPPSESFDEYVDKFLFPNISGHRQKALFLGYMVKCLLLACFGKRKCDNKDDFR 406
Query: 693 NKRLALAGDLLTQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAF 872
NKRL LAG+LL +ELR HIRHAERRM + MQRDL GDRD+ IERYLDASIITNGL++AF
Sbjct: 407 NKRLDLAGELLARELRAHIRHAERRMVKAMQRDLYGDRDLQLIERYLDASIITNGLNRAF 466
Query: 873 STGIWCHPSKIYEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
STG WCHP K E+CSG+VA L+R NPLQ +S+LRKTRQQV+YAGK GDARYPN
Sbjct: 467 STGAWCHPYKRTERCSGIVATLRRTNPLQMMSDLRKTRQQVAYAGKAGDARYPN 520
>XP_009413518.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Musa
acuminata subsp. malaccensis] XP_009413519.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 2-like
[Musa acuminata subsp. malaccensis]
Length = 1198
Score = 419 bits (1077), Expect = e-134
Identities = 215/344 (62%), Positives = 264/344 (76%), Gaps = 2/344 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
++E EI +GR+PVMV+S LCWL SDCLFD GGYF+IKG EK FI QE+ C TRLWV
Sbjct: 190 DDEGEITIGRLPVMVQSNLCWLSALGKSDCLFDSGGYFLIKGMEKTFIGQEQRCLTRLWV 249
Query: 189 -NKDPWSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
+K +V Y KR R++VKL E K ++ F GGKV++V FLY +M IWI+FFALGAS
Sbjct: 250 IDKPVATVSYLSEIKRKRIYVKLVEAPK-AEGFHGGKVISVYFLYATMPIWIMFFALGAS 308
Query: 366 SDKEVFEMIDL-DLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPP 542
SDKEV EMIDL D D A ++N++ ATI+ A+ Q +GFR +A HVN +I+ ++PP
Sbjct: 309 SDKEVLEMIDLKDCD---AGMINIILATIKDADEQFEGFRSLDKAREHVNALIKNAKFPP 365
Query: 543 SENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDL 722
SE+ +E + KYLF I GHR KA FLG+MVK LLL+ GKRKC+NKDDFRNKRL LAG+L
Sbjct: 366 SESFDEYVAKYLFPNIIGHRTKAHFLGYMVKCLLLSSFGKRKCDNKDDFRNKRLDLAGEL 425
Query: 723 LTQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSK 902
L +ELR HIRHAE+RM R MQRDL+GDRD+ IERYLDASIITNGL++AFSTG W HP K
Sbjct: 426 LARELRAHIRHAEKRMVRAMQRDLSGDRDLQPIERYLDASIITNGLNRAFSTGAWTHPYK 485
Query: 903 IYEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SG+VA L+R NPLQ +S++RKTRQQV+YAGK GDARYPN
Sbjct: 486 KTERLSGIVATLRRTNPLQMMSDMRKTRQQVAYAGKAGDARYPN 529
>XP_010937061.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Elaeis
guineensis]
Length = 1189
Score = 419 bits (1076), Expect = e-134
Identities = 211/354 (59%), Positives = 267/354 (75%), Gaps = 12/354 (3%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
+++KEI +GRIPVM++SKLCWL + SDCLFD GGYF+IKG EK FIAQE+ R+WV
Sbjct: 170 DKKKEIAIGRIPVMIRSKLCWLHTLDKSDCLFDSGGYFLIKGMEKTFIAQEQRHLARVWV 229
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
P W+V Y KR R+++KL E K ++ F GGKV+ FLY ++ +WI+FFALGAS
Sbjct: 230 TDKPSWAVSYLSEIKRKRIYIKLVEAPK-AEGFSGGKVVNFFFLYATIPVWIMFFALGAS 288
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGG-----------RALNHVN 512
SDKEVFEMIDL + AD++N++ AT++ A+ + FR +A ++VN
Sbjct: 289 SDKEVFEMIDLG--ESSADLINIILATVKNADEHYKKFREDADEHDKNFRRIDKAQDYVN 346
Query: 513 NMIQKTRYPPSENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFR 692
++ +++PPSE+ +E + K+LF I GHRQKALFLG+MVK LLLA GKRKC+NKDDFR
Sbjct: 347 GQVKVSKFPPSESFDEYVDKFLFPNIYGHRQKALFLGYMVKCLLLACFGKRKCDNKDDFR 406
Query: 693 NKRLALAGDLLTQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAF 872
NKRL LAG+LL +ELR HIRHAERRM + MQRDL GDRD+ IERYLDASIITNGL++AF
Sbjct: 407 NKRLDLAGELLARELRAHIRHAERRMVKAMQRDLYGDRDLQLIERYLDASIITNGLNRAF 466
Query: 873 STGIWCHPSKIYEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
STG WCHP K E+CSG+VA L+R NPLQ +S+LRKTRQQV+YAGK GDARYPN
Sbjct: 467 STGAWCHPYKRTERCSGIVATLRRTNPLQMMSDLRKTRQQVAYAGKAGDARYPN 520
>XP_012703111.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Setaria italica] KQK99160.1 hypothetical protein
SETIT_009201mg [Setaria italica]
Length = 1234
Score = 416 bits (1068), Expect = e-132
Identities = 198/338 (58%), Positives = 261/338 (77%), Gaps = 1/338 (0%)
Frame = +3
Query: 24 IIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWVNKDP- 200
I +GR+PVMVKS LC L SDCLFD GGYF++KG EK FIAQE+ C +RLW++ P
Sbjct: 233 IYIGRLPVMVKSNLCLLHNLKESDCLFDAGGYFLVKGMEKVFIAQEQRCLSRLWISDRPC 292
Query: 201 WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGASSDKEV 380
W+V + KR R+++KL E TK SD F G K++++ FLY +M IW++FFALG SSDKEV
Sbjct: 293 WTVSFMSEIKRRRIYIKLVESTK-SDDFSGSKIISISFLYATMPIWLMFFALGISSDKEV 351
Query: 381 FEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPSENIEE 560
F++ID+ A V+N + ATI+ ++ C+GFR +A +V+ +++ +R+PP+E+ ++
Sbjct: 352 FDVIDMQ--DGDASVINTISATIKESDELCEGFRKSDKARQYVDELVKNSRFPPAESFDD 409
Query: 561 CITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLLTQELR 740
+ ++LF I GHR KALFLG+MVK LL+AF GKRKC+NKDDFRNKRL LAG+LL +ELR
Sbjct: 410 YVDRFLFPDISGHRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLARELR 469
Query: 741 MHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKIYEKCS 920
HIR AERRM + +QRDLN DR++ +ERYLDASI+TNGL++AFSTG WCHP K E+CS
Sbjct: 470 AHIRLAERRMVKAIQRDLNSDRELQDLERYLDASIVTNGLNRAFSTGSWCHPYKKTERCS 529
Query: 921 GVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
G+VA L+R NPLQ IS+LRKTRQ+V+YAGK GDARYPN
Sbjct: 530 GIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPN 567
>OEL29148.1 DNA-directed RNA polymerases IV and V subunit 2 [Dichanthelium
oligosanthes]
Length = 1201
Score = 412 bits (1058), Expect = e-131
Identities = 195/339 (57%), Positives = 262/339 (77%), Gaps = 2/339 (0%)
Frame = +3
Query: 24 IIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWVNKDP- 200
I +GR+PVMVKS LC L N SDCLFD GGYF++KG EK FIAQE+ C +RLW+ P
Sbjct: 225 IYIGRLPVMVKSNLCLLHSLNKSDCLFDAGGYFLVKGMEKIFIAQEQRCLSRLWIADRPC 284
Query: 201 WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGASSDKEV 380
W+V + KR R+++KL EPTK D F G K++++ FLY +M IW++FFALG SSDKE
Sbjct: 285 WTVSFMSEIKRRRIYIKLVEPTKSED-FSGSKIISISFLYATMPIWLMFFALGISSDKEA 343
Query: 381 FEMIDL-DLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPSENIE 557
F++ID+ D D A V+N + ATI+ ++ C+GFR +A +V+ +++ +R+PP+E+ +
Sbjct: 344 FDVIDMQDCD---ASVINTISATIKESDELCEGFRKSDKARQYVDKLVKSSRFPPAESFD 400
Query: 558 ECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLLTQEL 737
+ + ++LF I G++ KALFLG+MVK LL+AF GKRKC+NKDDFRNKRL LAG+LL +EL
Sbjct: 401 DYVARFLFPDISGNKNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGREL 460
Query: 738 RMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKIYEKC 917
R +IRHAERRM + +QRDLN DR++ +ERY DASI+TNGL++AFSTG WCHP + E+C
Sbjct: 461 RANIRHAERRMVKAIQRDLNSDRELQDLERYFDASIVTNGLNRAFSTGSWCHPYRKTERC 520
Query: 918 SGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
SG+VA L+R NPLQ +S+LRKTRQ+V+YAGK GDARYPN
Sbjct: 521 SGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPN 559
>XP_009787512.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X2
[Nicotiana sylvestris]
Length = 1216
Score = 410 bits (1053), Expect = e-130
Identities = 200/343 (58%), Positives = 261/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
E+++++++GRIPVMV S+LCW++ + DC FD GGYFI+KGAEK FIAQE++C RLWV
Sbjct: 207 EDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWV 266
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
+ P W+V Y PV KR+RV++KL E K K LTV F M IWI+FFALG S
Sbjct: 267 SNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVS 326
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPS 545
SD+EV +ID+D++ ++VN+L A+I A+ +C+ FR G +AL +V+ +I+ R+PP
Sbjct: 327 SDREVVNLIDVDIED--TNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQ 384
Query: 546 ENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLL 725
E++EECI +YLF + G +QKA FLG+MVKSLL AF G+RK +N+DDFRNKRL LAG+LL
Sbjct: 385 ESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELL 444
Query: 726 TQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKI 905
+ELR HI+HAERRM + MQRDL GDR + IE YLDASIITNGLS+AFSTG WCHP K
Sbjct: 445 ERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKR 504
Query: 906 YEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SGVVA ++R NPLQ +++RKTRQQV+Y GKVGDARYP+
Sbjct: 505 MERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPH 547
>XP_009787511.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform X1
[Nicotiana sylvestris]
Length = 1226
Score = 410 bits (1053), Expect = e-130
Identities = 200/343 (58%), Positives = 261/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
E+++++++GRIPVMV S+LCW++ + DC FD GGYFI+KGAEK FIAQE++C RLWV
Sbjct: 217 EDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWV 276
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
+ P W+V Y PV KR+RV++KL E K K LTV F M IWI+FFALG S
Sbjct: 277 SNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVS 336
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPS 545
SD+EV +ID+D++ ++VN+L A+I A+ +C+ FR G +AL +V+ +I+ R+PP
Sbjct: 337 SDREVVNLIDVDIED--TNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQ 394
Query: 546 ENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLL 725
E++EECI +YLF + G +QKA FLG+MVKSLL AF G+RK +N+DDFRNKRL LAG+LL
Sbjct: 395 ESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELL 454
Query: 726 TQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKI 905
+ELR HI+HAERRM + MQRDL GDR + IE YLDASIITNGLS+AFSTG WCHP K
Sbjct: 455 ERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKR 514
Query: 906 YEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SGVVA ++R NPLQ +++RKTRQQV+Y GKVGDARYP+
Sbjct: 515 MERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPH 557
>XP_019252729.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana attenuata] XP_019252735.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana attenuata] XP_019252739.1 PREDICTED:
DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana attenuata] OIT08688.1 dna-directed rna
polymerases iv and v subunit 2 [Nicotiana attenuata]
Length = 1218
Score = 409 bits (1052), Expect = e-130
Identities = 200/343 (58%), Positives = 261/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
E+++++++GRIPVMV S+LCW+++ + DC FD GGYFI+KGAEK FIAQE++C RLWV
Sbjct: 209 EDKRDVLIGRIPVMVNSELCWMNRVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWV 268
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
+ P W+V Y PV KR+RV++KL E K K LTV F M IWI+FFALG S
Sbjct: 269 SNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGVEKALTVYFSVAEMPIWILFFALGVS 328
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPS 545
SD+EV +ID+D++ ++VN+L A+I A+ +C+ FR G +AL +V+ +I+ R+PP
Sbjct: 329 SDREVVNLIDVDIED--TNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQ 386
Query: 546 ENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLL 725
E++EECI YLF + G +QKA FLG+MVKSLL AF G+RK +N+DDFRNKRL LAG+LL
Sbjct: 387 ESVEECIQHYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELL 446
Query: 726 TQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKI 905
+ELR HI+HAERRM + MQRDL GDR + IE YLDASIITNGLS+AFSTG WCHP K
Sbjct: 447 ERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKR 506
Query: 906 YEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SGVVA ++R NPLQ +++RKTRQQV+Y GKVGDARYP+
Sbjct: 507 MERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPH 549
>XP_016481856.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana tabacum]
Length = 1220
Score = 409 bits (1052), Expect = e-130
Identities = 200/343 (58%), Positives = 262/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
E+++++++GRIPVMV S+LCW++ + DC FD GGYFI+KGAEK FIAQE++C RLWV
Sbjct: 211 EDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWV 270
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
+ P W+V Y PV KR+RV++KL E K K LTV F M IWI+FFALG S
Sbjct: 271 SNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGVEKALTVYFSVAEMPIWILFFALGVS 330
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPS 545
SD+EV ++ID+D++ ++VN+L A+I A+ +C+ FR G +AL +V+ +I+ R+PP
Sbjct: 331 SDREVVDLIDVDIED--TNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQ 388
Query: 546 ENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLL 725
E++EECI +YLF + G +QKA FLG+MVKSLL AF G+RK +N+DDFRNKRL LAG+LL
Sbjct: 389 ESVEECIKQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELL 448
Query: 726 TQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKI 905
+ELR HI+HAERRM + MQRDL GDR + IE YLDASIITNGLS+AFSTG WCHP K
Sbjct: 449 ERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKR 508
Query: 906 YEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SGVVA ++R NPLQ +++RKTRQQV+Y GKVGDARYP+
Sbjct: 509 MERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPH 551
>XP_009605686.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Nicotiana
tomentosiformis]
Length = 1220
Score = 409 bits (1052), Expect = e-130
Identities = 200/343 (58%), Positives = 262/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
E+++++++GRIPVMV S+LCW++ + DC FD GGYFI+KGAEK FIAQE++C RLWV
Sbjct: 211 EDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWV 270
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
+ P W+V Y PV KR+RV++KL E K K LTV F M IWI+FFALG S
Sbjct: 271 SNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGVEKALTVYFSVAEMPIWILFFALGVS 330
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPS 545
SD+EV ++ID+D++ ++VN+L A+I A+ +C+ FR G +AL +V+ +I+ R+PP
Sbjct: 331 SDREVVDLIDVDIED--TNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQ 388
Query: 546 ENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLL 725
E++EECI +YLF + G +QKA FLG+MVKSLL AF G+RK +N+DDFRNKRL LAG+LL
Sbjct: 389 ESVEECIKQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELL 448
Query: 726 TQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKI 905
+ELR HI+HAERRM + MQRDL GDR + IE YLDASIITNGLS+AFSTG WCHP K
Sbjct: 449 ERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKR 508
Query: 906 YEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SGVVA ++R NPLQ +++RKTRQQV+Y GKVGDARYP+
Sbjct: 509 MERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPH 551
>XP_016433825.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Nicotiana tabacum]
Length = 1243
Score = 410 bits (1053), Expect = e-130
Identities = 200/343 (58%), Positives = 261/343 (76%), Gaps = 1/343 (0%)
Frame = +3
Query: 9 EEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWV 188
E+++++++GRIPVMV S+LCW++ + DC FD GGYFI+KGAEK FIAQE++C RLWV
Sbjct: 207 EDKRDVLIGRIPVMVNSELCWMNGVDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWV 266
Query: 189 NKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGAS 365
+ P W+V Y PV KR+RV++KL E K K LTV F M IWI+FFALG S
Sbjct: 267 SNSPTWTVAYRPVAKRNRVYIKLAETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVS 326
Query: 366 SDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPS 545
SD+EV +ID+D++ ++VN+L A+I A+ +C+ FR G +AL +V+ +I+ R+PP
Sbjct: 327 SDREVVNLIDVDIED--TNIVNILVASIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQ 384
Query: 546 ENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLL 725
E++EECI +YLF + G +QKA FLG+MVKSLL AF G+RK +N+DDFRNKRL LAG+LL
Sbjct: 385 ESVEECIQQYLFPNLSGLKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELL 444
Query: 726 TQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKI 905
+ELR HI+HAERRM + MQRDL GDR + IE YLDASIITNGLS+AFSTG WCHP K
Sbjct: 445 ERELRAHIKHAERRMLKAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKR 504
Query: 906 YEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+ SGVVA ++R NPLQ +++RKTRQQV+Y GKVGDARYP+
Sbjct: 505 MERVSGVVATIRRTNPLQMTADMRKTRQQVTYTGKVGDARYPH 547
>AQK46533.1 DNA-directed RNA polymerases IV and V subunit 2 [Zea mays]
Length = 753
Score = 397 bits (1021), Expect = e-130
Identities = 189/339 (55%), Positives = 255/339 (75%), Gaps = 2/339 (0%)
Frame = +3
Query: 24 IIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWVNKDP- 200
I +G +PVMVKS LC L S+CLFD GGYF++KG EK FIAQE C RLW++ P
Sbjct: 7 IFIGLLPVMVKSNLCLLHSLKESECLFDAGGYFLVKGMEKVFIAQELRCLRRLWISDRPC 66
Query: 201 WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGASSDKEV 380
W++ + KR R+++KL E T+ D F G K++++ FLY +M +W++FFALG SSDKE
Sbjct: 67 WTISFMSEMKRRRIYIKLVESTRSED-FSGSKIISISFLYATMPVWLLFFALGISSDKEA 125
Query: 381 FEMIDL-DLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPSENIE 557
F++ID+ D D A V+N + ATI+ ++ C GFR +A +V+ +++ +++PP E+ +
Sbjct: 126 FDVIDMQDCD---ASVINTISATIKESDELCGGFRKSDKARQYVDELVKSSKFPPVESFD 182
Query: 558 ECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLLTQEL 737
+ I K+LF I G+R KALFLG+MVK LL+AF GKRKC+NKDDFRNKRL L G+LL +EL
Sbjct: 183 DYIAKFLFPGISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGREL 242
Query: 738 RMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKIYEKC 917
R H+R AERRM + +QRDLN DR++ +ERY+DASI+TNGL++AFSTG WCHP K E+C
Sbjct: 243 RAHLRQAERRMVKAIQRDLNSDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERC 302
Query: 918 SGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
SG+VA L+R NPLQ +S+LRKTRQ+V+YAGK GDARYPN
Sbjct: 303 SGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPN 341
>ONM13139.1 nuclear RNA polymerase D2/E2 [Zea mays]
Length = 773
Score = 397 bits (1021), Expect = e-129
Identities = 189/339 (55%), Positives = 257/339 (75%), Gaps = 2/339 (0%)
Frame = +3
Query: 24 IIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRLWVNKDP- 200
I +G +PVMVKS LC L N S+CLFD GGYF++KG EK FIAQE+ C RLW++ P
Sbjct: 7 IFIGLLPVMVKSNLCLLHSLNESECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRPC 66
Query: 201 WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALGASSDKEV 380
W++ + KR R+++KL E T+ D F K++T+ FLY +M +W++FFALG SSDKEV
Sbjct: 67 WTISFMSEIKRRRIYIKLVESTRSED-FSESKIITISFLYATMPVWLLFFALGISSDKEV 125
Query: 381 FEMIDL-DLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYPPSENIE 557
F+MID+ D D A V+N + ATI+ ++ C+ FR +A +V+ +++ +R+PP+E+ +
Sbjct: 126 FDMIDMQDCD---ASVINTISATIKESDKLCEDFRKSDKARQYVDELVKSSRFPPAESFD 182
Query: 558 ECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGDLLTQEL 737
+ I ++LF I G+R KALFLG+MVK LL+AF GKRKC+NKDDFRNKRL L G+LL +EL
Sbjct: 183 DYIARFLFPDISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLPGELLGREL 242
Query: 738 RMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPSKIYEKC 917
R +R AE+RM + +QRDLN DR++ +ERY+DASI+TNGL++AFSTG WCHP K E+C
Sbjct: 243 RAQLRLAEKRMVKAIQRDLNSDRELQDLERYIDASIVTNGLNRAFSTGSWCHPYKRAERC 302
Query: 918 SGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
SG+VA L+R NPLQ +S+LRKTRQ+V+YAGK GDARYPN
Sbjct: 303 SGIVATLRRTNPLQMMSDLRKTRQRVAYAGKAGDARYPN 341
>EMS61833.1 DNA-directed RNA polymerase D subunit 2a [Triticum urartu]
Length = 1269
Score = 406 bits (1044), Expect = e-128
Identities = 197/346 (56%), Positives = 260/346 (75%), Gaps = 2/346 (0%)
Frame = +3
Query: 3 LCEEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRL 182
L +E + +GR+PVMV S LCWL + SDCL+D GGYF+I+G EK FIAQE+ C TR+
Sbjct: 224 LMDETHVVNIGRLPVMVNSNLCWLRELRESDCLYDSGGYFLIRGMEKIFIAQEQRCLTRI 283
Query: 183 WVNKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALG 359
W+ P W+V Y KR R++VKL + TK +D F G K++++ FLY +M IW++FFALG
Sbjct: 284 WIADRPVWTVSYLSEIKRRRIYVKLIDSTKNND-FSGSKIISISFLYANMPIWLMFFALG 342
Query: 360 ASSDKEVFEMIDL-DLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRY 536
SSDKE F+MID+ D D A V+N + ATI ++ C+GFR +A V+++++ +++
Sbjct: 343 VSSDKEAFDMIDMGDCD---ASVINAISATISESDELCEGFRKSDKARQCVDDLVKSSKF 399
Query: 537 PPSENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAG 716
PP E+ ++ I KYLF I+G+R KALFLG+MVK LL+AF GKR+C+NKDDFRNKRL L G
Sbjct: 400 PPGESFDDYIAKYLFPGIKGNRNKALFLGYMVKCLLMAFTGKRRCDNKDDFRNKRLELPG 459
Query: 717 DLLTQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHP 896
LL +ELR H+RHAER M + MQRDLN DRD+ RYLDASIITNG+++AF+TG WCHP
Sbjct: 460 QLLGRELRAHLRHAERLMVKAMQRDLNSDRDLEFPTRYLDASIITNGINRAFATGSWCHP 519
Query: 897 SKIYEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
K E+CSG+VA L+R NPLQ +S+LRK+RQQV+YAGK GDARYPN
Sbjct: 520 YKRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKAGDARYPN 565
>JAT57709.1 DNA-directed RNA polymerase D subunit 2a [Anthurium amnicola]
Length = 1216
Score = 405 bits (1041), Expect = e-128
Identities = 208/345 (60%), Positives = 254/345 (73%), Gaps = 1/345 (0%)
Frame = +3
Query: 3 LCEEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRL 182
L E+ +EI+MG IPVMVKS LCWL K SDC FD GGYF+IKG EK FIAQE+ C++RL
Sbjct: 210 LIEDTREILMGSIPVMVKSNLCWLHKLGKSDCPFDVGGYFLIKGMEKVFIAQERRCSSRL 269
Query: 183 WVNKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALG 359
WV+ P W V Y K+ RV+V L E +K D F G K +T+ FLY +M IWI+FFALG
Sbjct: 270 WVSDKPSWKVQYQSQFKKKRVYVGLEEASKSCD-FSGKKTITICFLYATMPIWIMFFALG 328
Query: 360 ASSDKEVFEMIDLDLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRYP 539
ASSDKE+ +MI++D A +VN+L +TIR A+ Q F AL V+ ++ T++P
Sbjct: 329 ASSDKEILQMINID--DSDARLVNILLSTIRNADEQPGDFLNTQAALQFVDKEVKSTKFP 386
Query: 540 PSENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAGD 719
P+E IEECI YLF I+GHR KA FLG+MVKSLLLA+ GKRKC+N DFRNKRL LAGD
Sbjct: 387 PTETIEECIDNYLFPNIDGHRNKACFLGYMVKSLLLAWSGKRKCDNLHDFRNKRLELAGD 446
Query: 720 LLTQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHPS 899
LL++EL + I+HAERRM R MQ+DL GDRD+ IE YLDASIITNGL +AFSTG W HP
Sbjct: 447 LLSRELSIQIKHAERRMVRAMQKDLYGDRDLQVIEHYLDASIITNGLGRAFSTGAWSHPY 506
Query: 900 KIYEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
K E +G+VA L+R+N +Q IS+LRKTRQQV Y GK GDARYPN
Sbjct: 507 KRMETSTGIVANLRRLNAVQMISDLRKTRQQVQYPGKSGDARYPN 551
>KQJ88133.1 hypothetical protein BRADI_4g15740 [Brachypodium distachyon]
Length = 1026
Score = 400 bits (1028), Expect = e-128
Identities = 197/346 (56%), Positives = 256/346 (73%), Gaps = 2/346 (0%)
Frame = +3
Query: 3 LCEEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRL 182
+ E + +GR+PVMV S LCWL K SDCLFD GGYF+IKG EK FIAQE+ C TR+
Sbjct: 181 IINETHWVTIGRLPVMVNSDLCWLHKLGESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRI 240
Query: 183 WVNKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALG 359
WV P W+V Y KR RV++KL + T +D G K++++ FLY +M IW++FFALG
Sbjct: 241 WVADQPCWNVSYLSEMKRRRVYIKLIDSTTNND-LNGAKIISISFLYANMPIWLLFFALG 299
Query: 360 ASSDKEVFEMIDL-DLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRY 536
SSDKEVF+MID+ D D A V+N + ATIR ++ C+GFR +A +V+++++ +++
Sbjct: 300 VSSDKEVFDMIDMKDCD---ASVINAIYATIRESDELCEGFRQSDKARKYVDDLVKSSKF 356
Query: 537 PPSENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAG 716
PP+E + + KYLF I G+R K+ FLG+MVK LL+AF GKRKC+NKDDFRNKRL L G
Sbjct: 357 PPAEPFTDYVAKYLFPGISGNRNKSFFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLELPG 416
Query: 717 DLLTQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHP 896
LL +ELR H+RHAER M + MQRDLN DRD+ RYLDASIITNG+++AF+TG W HP
Sbjct: 417 QLLGRELRAHLRHAERLMVKAMQRDLNSDRDLQFPLRYLDASIITNGINRAFATGSWSHP 476
Query: 897 SKIYEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
E+CSG+VA L+R NPLQ +S+LRK+RQQV+YAGKVGDARYPN
Sbjct: 477 YIRNERCSGIVATLRRTNPLQMMSDLRKSRQQVAYAGKVGDARYPN 522
>XP_006652896.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Oryza brachyantha]
Length = 1250
Score = 405 bits (1040), Expect = e-128
Identities = 196/346 (56%), Positives = 259/346 (74%), Gaps = 2/346 (0%)
Frame = +3
Query: 3 LCEEEKEIIMGRIPVMVKSKLCWLDKHNASDCLFDCGGYFIIKGAEKAFIAQEKLCATRL 182
+ E I GR+PVMV S LCWL K SDC FD GGYF+IKG EK FIAQE+ C TR+
Sbjct: 219 IINETHYINFGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRI 278
Query: 183 WVNKDP-WSVWYWPVTKRDRVFVKLGEPTKQSDAFVGGKVLTVDFLYTSMSIWIVFFALG 359
WV + P W+V + +R R+++KL + TK D K++++ FLY +M IW++FFALG
Sbjct: 279 WVEERPCWTVSFLSAIRRRRIYIKLIDSTKNEDR----KIISISFLYANMPIWLMFFALG 334
Query: 360 ASSDKEVFEMIDL-DLDKYGADVVNMLQATIRYAESQCQGFRGGGRALNHVNNMIQKTRY 536
+SDK+VF++ID+ D D A V+N + ATI+ ++ C+GFR RA +V+ +I+ +++
Sbjct: 335 ITSDKDVFDVIDMQDCD---ACVINTISATIKESDELCEGFRKSDRARQYVDELIKDSKF 391
Query: 537 PPSENIEECITKYLFSPIEGHRQKALFLGHMVKSLLLAFCGKRKCENKDDFRNKRLALAG 716
PP E ++ + +YLF I G+R KALFLG+MVK LL+AF GKRKC+NKDDFRNKRL LAG
Sbjct: 392 PPGEPFDDYVARYLFPGISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAG 451
Query: 717 DLLTQELRMHIRHAERRMARLMQRDLNGDRDIHSIERYLDASIITNGLSKAFSTGIWCHP 896
+LL +ELR HIRHAER M + +QRDLN DR++ ++RYLDASIITNGL++AFSTG WCHP
Sbjct: 452 ELLGRELRAHIRHAERLMVKALQRDLNSDRELQELDRYLDASIITNGLNRAFSTGSWCHP 511
Query: 897 SKIYEKCSGVVAPLKRINPLQFISELRKTRQQVSYAGKVGDARYPN 1034
K E+C+G+VA L+R NPLQ IS+LRKTRQ+V+YAGK GDARYPN
Sbjct: 512 YKKNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPN 557