BLASTX nr result

ID: Alisma22_contig00015357 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00015357
         (570 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAY67736.1 putative ribonuclease H protein [Ananas comosus]            60   2e-07
OAY78804.1 putative ribonuclease H protein [Ananas comosus]            59   2e-07
OAY69027.1 LINE-1 retrotransposable element ORF2 protein [Ananas...    60   3e-07
XP_008650991.1 PREDICTED: uncharacterized protein LOC100217019 i...    56   6e-06
XP_020086093.1 uncharacterized protein LOC109708688 [Ananas como...    56   9e-06

>OAY67736.1 putative ribonuclease H protein [Ananas comosus]
          Length = 326

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
 Frame = +1

Query: 7   EYSVKCAYKFPSYRGITPSS-SKLWKQKWPHKYKTFXXXXXXXXXXTGEIIIKKGFHGPF 183
           ++SVK AY   +  G+  +  SK+W+ K P K+K F          T +I++K+G     
Sbjct: 212 QFSVKSAYSALTDGGVRDACVSKIWELKIPLKFKVFGWLVLKKRTLTRDILVKRGISNDP 271

Query: 184 RCVLCEQNEDSTSHIFFKCPFSQIII 261
            CVLC  +E++  H+F +C FS+ II
Sbjct: 272 TCVLCGTHEETVDHLFCRCVFSKFII 297


>OAY78804.1 putative ribonuclease H protein [Ananas comosus]
          Length = 244

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
 Frame = +1

Query: 10  YSVKCAYKFPSYRGITPSS-SKLWKQKWPHKYKTFXXXXXXXXXXTGEIIIKKGFHGPFR 186
           +SV+ AY F S+ GIT S  + LWK K P + K F          T   + K+G+ GP  
Sbjct: 125 FSVRSAYAFLSFDGITNSKIAFLWKLKIPLRIKIFLWLAARNKLLTTCFLAKRGWQGPSI 184

Query: 187 CVLCEQNEDSTSHIFFKCPFSQIIISHFLRYSL 285
           CVLC  + ++  H+ F CPF++   +  L  S+
Sbjct: 185 CVLCYFDAETIDHLLFLCPFARDFWNFLLEPSM 217


>OAY69027.1 LINE-1 retrotransposable element ORF2 protein [Ananas comosus]
          Length = 753

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/93 (30%), Positives = 48/93 (51%)
 Frame = +1

Query: 10  YSVKCAYKFPSYRGITPSSSKLWKQKWPHKYKTFXXXXXXXXXXTGEIIIKKGFHGPFRC 189
           ++VK  Y   +  G+    SK+W  + P K K F          T + ++K+G+ G   C
Sbjct: 629 FTVKSVYSMLNDGGLRDDRSKIWSFRVPLKVKVFTWIVLKKRPLTADNLLKRGWTGNTVC 688

Query: 190 VLCEQNEDSTSHIFFKCPFSQIIISHFLRYSLP 288
           VLCE  E++  H+F +C FS+ ++   +  +LP
Sbjct: 689 VLCESEEETVDHLFAQCVFSRFLMVMSMENALP 721


>XP_008650991.1 PREDICTED: uncharacterized protein LOC100217019 isoform X1 [Zea
           mays]
          Length = 523

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
 Frame = +1

Query: 7   EYSVKCAY-KFPSYRGITPSSSKLWKQKWPHKYKTFXXXXXXXXXXTGEIIIKKGFHGPF 183
           EYS K AY +F +         ++WK   P K K F          T + + ++G   P 
Sbjct: 344 EYSAKTAYQRFLAGSMEFEPGKRIWKSWAPPKCKFFIWLASLNRCWTADRLARRGLDHPV 403

Query: 184 RCVLCEQNEDSTSHIFFKCPFS-----QIIISHFLRYSLPDLQDSIF 309
           +CVLC+Q E++  HI   C FS     QI+    L+   P L+ SIF
Sbjct: 404 KCVLCDQQEETIQHILVSCVFSRNLWWQILCKVGLQLVAPGLETSIF 450


>XP_020086093.1 uncharacterized protein LOC109708688 [Ananas comosus]
          Length = 1589

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +1

Query: 10   YSVKCAYKFPSYRGITPSSSK-LWKQKWPHKYKTFXXXXXXXXXXTGEIIIKKGFHGPFR 186
            + V+ AY F  Y G+  +    LW  K P + K F          T + + K+G+ GP  
Sbjct: 1417 FQVRRAYNFLIYDGVNTNYIPCLWTIKIPLRVKIFMWLAARNKILTADTLAKRGWVGPSI 1476

Query: 187  CVLCEQNEDSTSHIFFKCPFSQIIISHFLRYSL 285
            C LC ++ +S  HIFF C +S  + ++ L++ L
Sbjct: 1477 CTLCSRSGESLQHIFFYCSYSTTVWTNLLQHHL 1509


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