BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00014305
         (765 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010916569.2 PREDICTED: RNA polymerase II transcription factor...   343   e-113
XP_008802071.1 PREDICTED: RNA polymerase II transcription factor...   335   e-111
XP_008802068.1 PREDICTED: RNA polymerase II transcription factor...   335   e-110
XP_009409177.1 PREDICTED: RNA polymerase II transcription factor...   318   e-106
XP_015583167.1 PREDICTED: general transcription factor IIH subun...   316   e-105
KMZ74119.1 putative RNA polymerase II transcription factor B sub...   316   e-105
XP_010999370.1 PREDICTED: general transcription factor IIH subun...   315   e-105
XP_002307429.2 basal transcription factor complex subunit-relate...   315   e-105
XP_008802070.1 PREDICTED: RNA polymerase II transcription factor...   319   e-104
OAY58252.1 hypothetical protein MANES_02G162200 [Manihot esculenta]   313   e-104
CBI19033.3 unnamed protein product, partial [Vitis vinifera]          310   e-103
XP_002284465.2 PREDICTED: RNA polymerase II transcription factor...   310   e-103
XP_012078222.1 PREDICTED: general transcription factor IIH subun...   309   e-103
JAT63230.1 General transcription factor IIH subunit 3, partial [...   308   e-102
XP_010273663.1 PREDICTED: RNA polymerase II transcription factor...   308   e-102
XP_012078217.1 PREDICTED: general transcription factor IIH subun...   305   e-101
XP_018683985.1 PREDICTED: RNA polymerase II transcription factor...   302   e-100
XP_009363173.1 PREDICTED: RNA polymerase II transcription factor...   301   e-100
XP_019104226.1 PREDICTED: RNA polymerase II transcription factor...   300   2e-99
XP_010999372.1 PREDICTED: general transcription factor IIH subun...   301   2e-99

>XP_010916569.2 PREDICTED: RNA polymerase II transcription factor B subunit 4
           [Elaeis guineensis]
          Length = 486

 Score =  343 bits (879), Expect = e-113
 Identities = 173/246 (70%), Positives = 198/246 (80%), Gaps = 2/246 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVV+IA+G+NSCGY+Y                PA+ SE+ RK+ EFV KDRRLGK  
Sbjct: 63  QLNQVVLIATGVNSCGYIYDSAGGGSHGGNV----PAVCSEILRKVEEFVAKDRRLGKGP 118

Query: 585 EQT-AGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFS 409
           ++  AG V           LCYIQRVFRSG +HPQPRILCLQGSPDGPEQYVAVMN+IFS
Sbjct: 119 DRVVAGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQGSPDGPEQYVAVMNAIFS 178

Query: 408 AQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQ 232
           AQRS+VPIDSC+IG Q SAFLQQAS+ITGG+YLKPQH++GLFQ LAAVFATDLQSRNFLQ
Sbjct: 179 AQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQHLDGLFQYLAAVFATDLQSRNFLQ 238

Query: 231 LSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIK 52
           L KP GVDFRASCFCHKKTI MGY+CSVCLSIFCK HKKCSTCGSEFN+ P +++++S +
Sbjct: 239 LPKPAGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDANATSDR 298

Query: 51  KRKASE 34
           KRK SE
Sbjct: 299 KRKVSE 304


>XP_008802071.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X3 [Phoenix dactylifera] XP_008802073.1
           PREDICTED: RNA polymerase II transcription factor B
           subunit 4 isoform X3 [Phoenix dactylifera]
          Length = 459

 Score =  335 bits (860), Expect = e-111
 Identities = 170/246 (69%), Positives = 194/246 (78%), Gaps = 2/246 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVV+IA+G+NSCGY+Y                PA+ SE+ R+L EFV KDRRLGK  
Sbjct: 66  QLNQVVLIATGVNSCGYIYDSAGGGSHGGNV----PAVCSEILRRLEEFVAKDRRLGKGP 121

Query: 585 EQTA-GTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFS 409
           ++   G V           LCYIQRVFRSG +HPQPRILCLQ SPDGPEQYVAVMN+IFS
Sbjct: 122 DRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQASPDGPEQYVAVMNAIFS 181

Query: 408 AQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQ 232
           AQRS+VPIDSC+IG Q SAFLQQAS+ITGG+YLKPQ ++GLFQ LAAVFATDLQSRNFLQ
Sbjct: 182 AQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLAAVFATDLQSRNFLQ 241

Query: 231 LSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIK 52
           L KP GVDFRASCFCHKKTI MGY+CSVCLSIFCK HKKCSTCGSEFN+ P ++ ++S +
Sbjct: 242 LPKPAGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDASATSDR 301

Query: 51  KRKASE 34
           KRK SE
Sbjct: 302 KRKVSE 307


>XP_008802068.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X1 [Phoenix dactylifera] XP_008802069.1
           PREDICTED: RNA polymerase II transcription factor B
           subunit 4 isoform X1 [Phoenix dactylifera]
          Length = 475

 Score =  335 bits (860), Expect = e-110
 Identities = 170/246 (69%), Positives = 194/246 (78%), Gaps = 2/246 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVV+IA+G+NSCGY+Y                PA+ SE+ R+L EFV KDRRLGK  
Sbjct: 66  QLNQVVLIATGVNSCGYIYDSAGGGSHGGNV----PAVCSEILRRLEEFVAKDRRLGKGP 121

Query: 585 EQTA-GTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFS 409
           ++   G V           LCYIQRVFRSG +HPQPRILCLQ SPDGPEQYVAVMN+IFS
Sbjct: 122 DRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPRILCLQASPDGPEQYVAVMNAIFS 181

Query: 408 AQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQ 232
           AQRS+VPIDSC+IG Q SAFLQQAS+ITGG+YLKPQ ++GLFQ LAAVFATDLQSRNFLQ
Sbjct: 182 AQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLAAVFATDLQSRNFLQ 241

Query: 231 LSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIK 52
           L KP GVDFRASCFCHKKTI MGY+CSVCLSIFCK HKKCSTCGSEFN+ P ++ ++S +
Sbjct: 242 LPKPAGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDASATSDR 301

Query: 51  KRKASE 34
           KRK SE
Sbjct: 302 KRKVSE 307


>XP_009409177.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X1 [Musa acuminata subsp. malaccensis]
           XP_009409178.1 PREDICTED: RNA polymerase II
           transcription factor B subunit 4 isoform X1 [Musa
           acuminata subsp. malaccensis] XP_018683984.1 PREDICTED:
           RNA polymerase II transcription factor B subunit 4
           isoform X1 [Musa acuminata subsp. malaccensis]
          Length = 314

 Score =  318 bits (816), Expect = e-106
 Identities = 162/246 (65%), Positives = 191/246 (77%), Gaps = 2/246 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVV++A+G+NSCGY+Y                PA+ SE+ R+L EFV KDR  GK  
Sbjct: 70  QLNQVVLVATGVNSCGYIYDSGDGGGGSACGSV--PAICSEILRRLEEFVVKDRLQGKSP 127

Query: 585 EQTAGT-VXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFS 409
           ++   T V           LCYIQRVFRS   HPQPRILCLQGSPDGPEQYVAVMN+IFS
Sbjct: 128 DKVVATGVSSLLSGSLSLALCYIQRVFRSRARHPQPRILCLQGSPDGPEQYVAVMNAIFS 187

Query: 408 AQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQ 232
           AQRS++PIDSC++G Q SAFLQQAS+ITGG+YLKPQ ++GLFQ L+AVFATDLQSRNFLQ
Sbjct: 188 AQRSMIPIDSCVMGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLSAVFATDLQSRNFLQ 247

Query: 231 LSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIK 52
           L KP GVDFRASCFCHKKTI MGY+CSVCLSIFCK HKKCSTCGS+F++  G +D+++ +
Sbjct: 248 LPKPAGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSDFSQ--GPTDANADR 305

Query: 51  KRKASE 34
           KRK SE
Sbjct: 306 KRKTSE 311


>XP_015583167.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Ricinus communis]
          Length = 297

 Score =  316 bits (809), Expect = e-105
 Identities = 158/246 (64%), Positives = 184/246 (74%), Gaps = 1/246 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIA+G NSC Y+Y                PAL+S++ +KL +F+ +D +LGK E
Sbjct: 53  QLNQVVVIANGYNSCDYIYDSSLVMNHSSDEGRI-PALYSDLLQKLEDFMIRDEKLGKGE 111

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
           E                 LCYIQR+FRSGP+HPQPRILCLQGSPDGPEQYVAVMNSIFSA
Sbjct: 112 ESKRKIASSLLSGSLSMALCYIQRIFRSGPLHPQPRILCLQGSPDGPEQYVAVMNSIFSA 171

Query: 405 QRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC +G   SAFLQQAS+ITGG+Y+KPQH++GLFQ L  VFATDL SR+FLQL
Sbjct: 172 QRSMVPIDSCYVGGHNSAFLQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHSRSFLQL 231

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKK 49
            +P GVDFRASCFCHK TI MG+ICSVCLSIFCK HKKCSTCGS F +   ++ SS  +K
Sbjct: 232 PRPAGVDFRASCFCHKTTIDMGFICSVCLSIFCKHHKKCSTCGSVFGQSQSDNSSSLDRK 291

Query: 48  RKASEA 31
           RKA EA
Sbjct: 292 RKAPEA 297


>KMZ74119.1 putative RNA polymerase II transcription factor B subunit [Zostera
           marina]
          Length = 303

 Score =  316 bits (809), Expect = e-105
 Identities = 158/241 (65%), Positives = 181/241 (75%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLN++V+IA GINSCGY+Y                PA F+EV  KL EF+E D    K  
Sbjct: 60  QLNEIVLIAHGINSCGYIYNSSMENRRGGKRG---PAFFAEVSEKLKEFMEADCLHRKGA 116

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
           + T+  V           LCYIQRVFRS PI+P+PRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 117 KSTSTIVPSLLSGSLSLALCYIQRVFRSRPIYPRPRILCLQGSPDGPEQYVAVMNAIFSA 176

Query: 405 QRSLVPIDSCIIGQTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQLS 226
           QRS V IDSC++G  SAFLQQASHITGG+Y+KPQ ++GLFQCL+ VFATD+QSR+FLQL 
Sbjct: 177 QRSSVLIDSCVLGLNSAFLQQASHITGGVYIKPQQLDGLFQCLSMVFATDVQSRSFLQLP 236

Query: 225 KPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKKR 46
           KP GVDFRASCFCHK TI MGYICSVCLSIFCKRHKKCSTCGS+FNR    S SS ++K 
Sbjct: 237 KPAGVDFRASCFCHKTTISMGYICSVCLSIFCKRHKKCSTCGSDFNRPNSNSKSSPVQKS 296

Query: 45  K 43
           K
Sbjct: 297 K 297


>XP_010999370.1 PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Populus euphratica] XP_010999371.1 PREDICTED: general
           transcription factor IIH subunit 3 isoform X2 [Populus
           euphratica]
          Length = 298

 Score =  315 bits (806), Expect = e-105
 Identities = 157/245 (64%), Positives = 183/245 (74%), Gaps = 1/245 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIASG N+C Y+Y                P+L+S + +KL EF+ KD +LGK++
Sbjct: 54  QLNQVVVIASGYNTCDYIYDSSSDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQ 113

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
            Q A              LCYIQRVFRSGP+HPQPRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 114 SQRA-IKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 172

Query: 405 QRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC +G   SAFLQQAS+ITGG+Y+KPQH++GLFQ L  VFATDL SR+F+QL
Sbjct: 173 QRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQL 232

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKK 49
            +P GVDFRASCFCHK TI MGYICSVCLSIFC  HKKCSTCGS F +   ++ S+S  K
Sbjct: 233 PRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTSDLK 292

Query: 48  RKASE 34
           RKA E
Sbjct: 293 RKAPE 297


>XP_002307429.2 basal transcription factor complex subunit-related family protein
           [Populus trichocarpa] EEE94425.2 basal transcription
           factor complex subunit-related family protein [Populus
           trichocarpa]
          Length = 298

 Score =  315 bits (806), Expect = e-105
 Identities = 157/245 (64%), Positives = 183/245 (74%), Gaps = 1/245 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIASG N+C Y+Y                P+L+S + +KL EF+ KD +LGK++
Sbjct: 54  QLNQVVVIASGYNTCDYIYDSSSDASQLGSEDGRMPSLYSNLLQKLEEFMIKDEKLGKEQ 113

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
            Q A              LCYIQRVFRSGP+HPQPRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 114 SQRA-IKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 172

Query: 405 QRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC +G   SAFLQQAS+ITGG+Y+KPQH++GLFQ L  VFATDL SR+F+QL
Sbjct: 173 QRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQL 232

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKK 49
            +P GVDFRASCFCHK TI MGYICSVCLSIFC  HKKCSTCGS F +   ++ S+S  K
Sbjct: 233 PRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGSVFGQAQSDTSSTSDLK 292

Query: 48  RKASE 34
           RKA E
Sbjct: 293 RKAPE 297


>XP_008802070.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X2 [Phoenix dactylifera]
          Length = 470

 Score =  319 bits (818), Expect = e-104
 Identities = 165/246 (67%), Positives = 189/246 (76%), Gaps = 2/246 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVV+IA+G+NSCGY+Y                PA+ SE+ R+L EFV KDRRLGK  
Sbjct: 66  QLNQVVLIATGVNSCGYIYDSAGGGSHGGNV----PAVCSEILRRLEEFVAKDRRLGKGP 121

Query: 585 EQTA-GTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFS 409
           ++   G V           LCYIQRVFRSG +HPQPR      SPDGPEQYVAVMN+IFS
Sbjct: 122 DRVVVGGVSSLLSGSLSLALCYIQRVFRSGALHPQPR-----ASPDGPEQYVAVMNAIFS 176

Query: 408 AQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQ 232
           AQRS+VPIDSC+IG Q SAFLQQAS+ITGG+YLKPQ ++GLFQ LAAVFATDLQSRNFLQ
Sbjct: 177 AQRSMVPIDSCVIGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLAAVFATDLQSRNFLQ 236

Query: 231 LSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIK 52
           L KP GVDFRASCFCHKKTI MGY+CSVCLSIFCK HKKCSTCGSEFN+ P ++ ++S +
Sbjct: 237 LPKPAGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSEFNQSPPDASATSDR 296

Query: 51  KRKASE 34
           KRK SE
Sbjct: 297 KRKVSE 302


>OAY58252.1 hypothetical protein MANES_02G162200 [Manihot esculenta]
          Length = 296

 Score =  313 bits (801), Expect = e-104
 Identities = 159/245 (64%), Positives = 183/245 (74%), Gaps = 1/245 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIA+G NSC Y+Y                PAL+S + +KL EF+ +D +LGK E
Sbjct: 53  QLNQVVVIATGYNSCDYIYDSSSAPNHSSEDARL-PALYSNLLQKLEEFMIRDEKLGK-E 110

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
           E                 LCYIQRVFRSGP+HPQPRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 111 EPRGKLASSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 170

Query: 405 QRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC +G   SAFLQQAS+ITGG+Y+KPQH++GLFQ L  VFATDL SR+FLQL
Sbjct: 171 QRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHSRSFLQL 230

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKK 49
            +P GVDFRASCFCHK TI MGYICSVCLSIFCK HKKCSTCGS F +   ++ S+S +K
Sbjct: 231 PRPAGVDFRASCFCHKMTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDNTSASDRK 290

Query: 48  RKASE 34
           RKA E
Sbjct: 291 RKAPE 295


>CBI19033.3 unnamed protein product, partial [Vitis vinifera]
          Length = 297

 Score =  310 bits (795), Expect = e-103
 Identities = 158/245 (64%), Positives = 181/245 (73%), Gaps = 1/245 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIA+G NSC +++                PAL S + +KL EFV  D +L K E
Sbjct: 53  QLNQVVVIATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKLSK-E 111

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
              AG             LCYIQRVFR+GP+HPQPRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 112 VLAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 171

Query: 405 QRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC+IG Q SAFLQQAS+ITGG+YLKPQ ++GLFQ L+ VFATDL SR FLQL
Sbjct: 172 QRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQL 231

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKK 49
            KP GVDFRASCFCHK TI MGYICSVCLSIFCK HKKCSTCGS F +   + +S++ +K
Sbjct: 232 PKPAGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRK 291

Query: 48  RKASE 34
           RK  E
Sbjct: 292 RKTPE 296


>XP_002284465.2 PREDICTED: RNA polymerase II transcription factor B subunit 4
           [Vitis vinifera]
          Length = 303

 Score =  310 bits (795), Expect = e-103
 Identities = 158/245 (64%), Positives = 181/245 (73%), Gaps = 1/245 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIA+G NSC +++                PAL S + +KL EFV  D +L K E
Sbjct: 59  QLNQVVVIATGCNSCNFIFDSSSVPANPNLENGRMPALCSNLLQKLEEFVTGDEKLSK-E 117

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
              AG             LCYIQRVFR+GP+HPQPRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 118 VLAAGIGSSLLSGSLSMALCYIQRVFRTGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 177

Query: 405 QRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC+IG Q SAFLQQAS+ITGG+YLKPQ ++GLFQ L+ VFATDL SR FLQL
Sbjct: 178 QRSMVPIDSCVIGAQHSAFLQQASYITGGVYLKPQQLDGLFQYLSTVFATDLHSRRFLQL 237

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKK 49
            KP GVDFRASCFCHK TI MGYICSVCLSIFCK HKKCSTCGS F +   + +S++ +K
Sbjct: 238 PKPAGVDFRASCFCHKNTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQSDGNSATDRK 297

Query: 48  RKASE 34
           RK  E
Sbjct: 298 RKTPE 302


>XP_012078222.1 PREDICTED: general transcription factor IIH subunit 3 isoform X2
           [Jatropha curcas] KDP32789.1 hypothetical protein
           JCGZ_12081 [Jatropha curcas]
          Length = 296

 Score =  309 bits (792), Expect = e-103
 Identities = 158/245 (64%), Positives = 183/245 (74%), Gaps = 1/245 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIA+G NSC YVY                PAL+S + + L EF+ KD +LGK+E
Sbjct: 53  QLNQVVVIATGYNSCNYVYDSSLAANQSSEDGRM-PALYSNLLQALEEFMIKDEKLGKEE 111

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
            Q                LCYIQRVFRSGP++PQPRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 112 SQ-GKIASSLLSGSLSMALCYIQRVFRSGPLNPQPRILCLQGSPDGPEQYVAVMNAIFSA 170

Query: 405 QRSLVPIDSCIIGQ-TSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC +G   SAFLQQAS+ITGG+Y+KPQH++GLFQ L  VFATDL  R+FLQL
Sbjct: 171 QRSMVPIDSCYVGSHNSAFLQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRSFLQL 230

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKK 49
            +P GVDFRASCFCHK TI MGYICSVCLSIFCK+HKKCSTCGS F +   ++ S+S +K
Sbjct: 231 PRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQSQSDNSSASDRK 290

Query: 48  RKASE 34
           RKA E
Sbjct: 291 RKAPE 295


>JAT63230.1 General transcription factor IIH subunit 3, partial [Anthurium
           amnicola]
          Length = 279

 Score =  308 bits (788), Expect = e-102
 Identities = 159/248 (64%), Positives = 183/248 (73%), Gaps = 3/248 (1%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLN VVVIA+G+ SCGY+Y                P L + V R L EFVE DR+L K  
Sbjct: 37  QLNHVVVIAAGVRSCGYIYDSGGGGDGAKV-----PDLSAGVMRGLEEFVEADRQLSKGG 91

Query: 585 EQT--AGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIF 412
           E+   + ++           LCYIQRVFRSG IHP PRILCLQGSPDGPEQYVAVMN+IF
Sbjct: 92  ERATESSSLASLLSGSLSLALCYIQRVFRSGTIHPHPRILCLQGSPDGPEQYVAVMNAIF 151

Query: 411 SAQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFL 235
           SAQRS+VPIDSC++G Q SAFLQQASHITGG+YLKPQ  +GL Q L+ VFATDLQSR+FL
Sbjct: 152 SAQRSMVPIDSCVVGIQHSAFLQQASHITGGVYLKPQQHDGLLQYLSMVFATDLQSRSFL 211

Query: 234 QLSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSI 55
           QL KP GVDFRASCFCHKKTI  GY+CSVCLSIFCK HKKCSTCGS+F + P +S+S + 
Sbjct: 212 QLPKPAGVDFRASCFCHKKTIDRGYVCSVCLSIFCKPHKKCSTCGSDFKQSPADSNSKAD 271

Query: 54  KKRKASEA 31
            KRK  +A
Sbjct: 272 GKRKTPDA 279


>XP_010273663.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X1 [Nelumbo nucifera]
          Length = 303

 Score =  308 bits (789), Expect = e-102
 Identities = 156/247 (63%), Positives = 186/247 (75%), Gaps = 2/247 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXG-PALFSEVPRKLAEFVEKDRRLGKD 589
           QLNQVVVIA+G+NSC Y+Y                 PAL S++ + L EF+ +D+ L KD
Sbjct: 58  QLNQVVVIATGLNSCDYIYDSSSSPTTVESLENGRMPALCSKLLQNLEEFLARDQELNKD 117

Query: 588 EEQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFS 409
           E    G             LCYIQ+VFRSGP+HPQPRILCLQGS DGPEQYVA+MN+IFS
Sbjct: 118 ESPP-GIASSLLSGSLSLALCYIQKVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNAIFS 176

Query: 408 AQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQ 232
           AQRS+VPID+C+IG Q SAFLQQAS+ITGG+YLKP  ++GLFQ L+ VF+TDLQSR+FLQ
Sbjct: 177 AQRSMVPIDACVIGAQHSAFLQQASYITGGVYLKPPQLDGLFQYLSTVFSTDLQSRSFLQ 236

Query: 231 LSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIK 52
           L KPVGVDFRASCFCHKKTI MGYICSVCLSIFCK HKKCSTCGS F +    + ++S +
Sbjct: 237 LPKPVGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAHSSATTTSDR 296

Query: 51  KRKASEA 31
           KRK +E+
Sbjct: 297 KRKTTES 303


>XP_012078217.1 PREDICTED: general transcription factor IIH subunit 3 isoform X1
           [Jatropha curcas] XP_012078218.1 PREDICTED: general
           transcription factor IIH subunit 3 isoform X1 [Jatropha
           curcas] XP_012078219.1 PREDICTED: general transcription
           factor IIH subunit 3 isoform X1 [Jatropha curcas]
           XP_012078220.1 PREDICTED: general transcription factor
           IIH subunit 3 isoform X1 [Jatropha curcas]
          Length = 297

 Score =  305 bits (780), Expect = e-101
 Identities = 158/246 (64%), Positives = 183/246 (74%), Gaps = 2/246 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIA+G NSC YVY                PAL+S + + L EF+ KD +LGK+E
Sbjct: 53  QLNQVVVIATGYNSCNYVYDSSLAANQSSEDGRM-PALYSNLLQALEEFMIKDEKLGKEE 111

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
            Q                LCYIQRVFRSGP++PQPRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 112 SQ-GKIASSLLSGSLSMALCYIQRVFRSGPLNPQPRILCLQGSPDGPEQYVAVMNAIFSA 170

Query: 405 QRSLVPIDSCIIGQ-TSAFLQQ-ASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQ 232
           QRS+VPIDSC +G   SAFLQQ AS+ITGG+Y+KPQH++GLFQ L  VFATDL  R+FLQ
Sbjct: 171 QRSMVPIDSCYVGSHNSAFLQQQASYITGGVYVKPQHLDGLFQYLVTVFATDLHCRSFLQ 230

Query: 231 LSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIK 52
           L +P GVDFRASCFCHK TI MGYICSVCLSIFCK+HKKCSTCGS F +   ++ S+S +
Sbjct: 231 LPRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCKQHKKCSTCGSVFGQSQSDNSSASDR 290

Query: 51  KRKASE 34
           KRKA E
Sbjct: 291 KRKAPE 296


>XP_018683985.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X2 [Musa acuminata subsp. malaccensis]
          Length = 309

 Score =  302 bits (774), Expect = e-100
 Identities = 157/246 (63%), Positives = 186/246 (75%), Gaps = 2/246 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVV++A+G+NSCGY+Y                PA+ SE+ R+L EFV KDR  GK  
Sbjct: 70  QLNQVVLVATGVNSCGYIYDSGDGGGGSACGSV--PAICSEILRRLEEFVVKDRLQGKSP 127

Query: 585 EQTAGT-VXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFS 409
           ++   T V           LCYIQRVFRS   HPQPR     GSPDGPEQYVAVMN+IFS
Sbjct: 128 DKVVATGVSSLLSGSLSLALCYIQRVFRSRARHPQPR-----GSPDGPEQYVAVMNAIFS 182

Query: 408 AQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQ 232
           AQRS++PIDSC++G Q SAFLQQAS+ITGG+YLKPQ ++GLFQ L+AVFATDLQSRNFLQ
Sbjct: 183 AQRSMIPIDSCVMGVQHSAFLQQASYITGGVYLKPQQLDGLFQYLSAVFATDLQSRNFLQ 242

Query: 231 LSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIK 52
           L KP GVDFRASCFCHKKTI MGY+CSVCLSIFCK HKKCSTCGS+F++  G +D+++ +
Sbjct: 243 LPKPAGVDFRASCFCHKKTIDMGYVCSVCLSIFCKHHKKCSTCGSDFSQ--GPTDANADR 300

Query: 51  KRKASE 34
           KRK SE
Sbjct: 301 KRKTSE 306


>XP_009363173.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           [Pyrus x bretschneideri] XP_009363174.1 PREDICTED: RNA
           polymerase II transcription factor B subunit 4 [Pyrus x
           bretschneideri] XP_009363175.1 PREDICTED: RNA polymerase
           II transcription factor B subunit 4 [Pyrus x
           bretschneideri]
          Length = 297

 Score =  301 bits (772), Expect = e-100
 Identities = 158/245 (64%), Positives = 177/245 (72%), Gaps = 1/245 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIA+G NSC Y+Y                PA  S + +KL EFV KD +L K E
Sbjct: 53  QLNQVVVIATGYNSCSYIYDSSSDSNQGSDHGRIMPARCSNLLQKLEEFVIKDEQLFK-E 111

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
               G             LCYIQRVFRSGP+HPQPRILCLQGS DGPEQYVA+MNSIFSA
Sbjct: 112 GSREGISSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSSDGPEQYVAIMNSIFSA 171

Query: 405 QRSLVPIDSCIIGQT-SAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC +G + SAFLQQAS+ITGG+YLKPQ   GLFQ L+ VFATDL SR FLQL
Sbjct: 172 QRSMVPIDSCYMGSSNSAFLQQASYITGGVYLKPQQPNGLFQYLSTVFATDLHSRAFLQL 231

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESDSSSIKK 49
            K +GVDFRASCFCHKKTI MGYICSVCLSIFCK HKKCSTCGS F +   ++ S+S +K
Sbjct: 232 PKSLGVDFRASCFCHKKTIDMGYICSVCLSIFCKHHKKCSTCGSVFGQAQLDASSTSNRK 291

Query: 48  RKASE 34
           RK  E
Sbjct: 292 RKTPE 296


>XP_019104226.1 PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X3 [Beta vulgaris subsp. vulgaris]
          Length = 274

 Score =  300 bits (768), Expect = 2e-99
 Identities = 155/248 (62%), Positives = 178/248 (71%), Gaps = 7/248 (2%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXG------PALFSEVPRKLAEFVEKDR 604
           QLNQVV+IA+G N+CGY++                      P+  S+V + L EFV KD 
Sbjct: 25  QLNQVVIIATGHNTCGYIFDSSLSSVSSSISSNQSSDNATMPSFCSDVMKNLEEFVTKDE 84

Query: 603 RLGKDEEQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVM 424
            L    +   G             LCYIQRVFRSGP+HPQPRILCL GSPDGPEQYVAVM
Sbjct: 85  SLSS-VDVVHGVDSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLHGSPDGPEQYVAVM 143

Query: 423 NSIFSAQRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQS 247
           N+IFSAQRS+VPIDSC+IG Q SAFLQQAS+ITGG+YLKPQ +EGLFQ L+ VFATDL S
Sbjct: 144 NAIFSAQRSMVPIDSCVIGGQHSAFLQQASYITGGVYLKPQQLEGLFQYLSTVFATDLHS 203

Query: 246 RNFLQLSKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSEFNRVPGESD 67
           RNF+QL KPVGVDFRASCFCHK TI MGYICSVCLSIFC  HKKCSTCGS + R   ++ 
Sbjct: 204 RNFIQLPKPVGVDFRASCFCHKNTIDMGYICSVCLSIFCMHHKKCSTCGSLYGRAQSDAS 263

Query: 66  SSSIKKRK 43
           S+S +KRK
Sbjct: 264 STSGQKRK 271


>XP_010999372.1 PREDICTED: general transcription factor IIH subunit 3 isoform X3
           [Populus euphratica]
          Length = 295

 Score =  301 bits (770), Expect = 2e-99
 Identities = 148/225 (65%), Positives = 171/225 (76%), Gaps = 1/225 (0%)
 Frame = -1

Query: 765 QLNQVVVIASGINSCGYVYXXXXXXXXXXXXXXXGPALFSEVPRKLAEFVEKDRRLGKDE 586
           QLNQVVVIASG N+C Y+Y                P+L+S + +KL EF+ KD +LGK++
Sbjct: 54  QLNQVVVIASGYNTCDYIYDSSSDASQLGSENGRIPSLYSNLLQKLEEFMIKDEKLGKEQ 113

Query: 585 EQTAGTVXXXXXXXXXXXLCYIQRVFRSGPIHPQPRILCLQGSPDGPEQYVAVMNSIFSA 406
            Q A              LCYIQRVFRSGP+HPQPRILCLQGSPDGPEQYVAVMN+IFSA
Sbjct: 114 SQRA-IKSSLLSGSLSMALCYIQRVFRSGPLHPQPRILCLQGSPDGPEQYVAVMNAIFSA 172

Query: 405 QRSLVPIDSCIIG-QTSAFLQQASHITGGIYLKPQHMEGLFQCLAAVFATDLQSRNFLQL 229
           QRS+VPIDSC +G   SAFLQQAS+ITGG+Y+KPQH++GLFQ L  VFATDL SR+F+QL
Sbjct: 173 QRSMVPIDSCYVGAHNSAFLQQASYITGGVYVKPQHLDGLFQYLTTVFATDLHSRSFIQL 232

Query: 228 SKPVGVDFRASCFCHKKTIQMGYICSVCLSIFCKRHKKCSTCGSE 94
            +P GVDFRASCFCHK TI MGYICSVCLSIFC  HKKCSTCG +
Sbjct: 233 PRPAGVDFRASCFCHKTTIDMGYICSVCLSIFCNHHKKCSTCGDD 277