BLASTX nr result
ID: Alisma22_contig00014174
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00014174
(1567 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM ... 160 e-114
ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass... 171 e-110
KYP31134.1 Retrovirus-related Pol polyprotein from transposon TN... 151 e-101
BAA22288.1 polyprotein [Oryza australiensis] 226 2e-97
KZV22848.1 hypothetical protein F511_19440 [Dorcoceras hygrometr... 138 3e-95
KYP42262.1 Retrovirus-related Pol polyprotein from transposon TN... 213 2e-93
AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-clas... 217 6e-93
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group] 210 8e-92
XP_017233167.1 PREDICTED: uncharacterized protein LOC108207215, ... 141 6e-91
ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass... 211 1e-90
KYP68472.1 Retrovirus-related Pol polyprotein from transposon TN... 157 2e-90
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass... 210 9e-90
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 219 9e-88
CAE03845.1 OSJNBb0089K06.4 [Oryza sativa Japonica Group] 183 3e-84
CAN81793.1 hypothetical protein VITISV_020571 [Vitis vinifera] 137 1e-81
CAN64073.1 hypothetical protein VITISV_038270 [Vitis vinifera] 133 2e-79
KZV20448.1 retrovirus-related Pol polyprotein from transposon TN... 148 5e-78
AMY96445.1 gag/pol protein [Momordica dioica] 171 9e-76
ABG22008.1 retrotransposon protein, putative, Ty1-copia subclass... 137 8e-72
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 221 4e-69
>EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 160 bits (405), Expect(4) = e-114
Identities = 87/189 (46%), Positives = 116/189 (61%), Gaps = 5/189 (2%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINN--GMISISKDEIFCENAPMSYGMYLLELETSIYNINTKRL 1392
RNII + GF F +N G IS+ K+ I A G+Y E + N+
Sbjct: 344 RNIISFHALFRQGFHFSFDNNIGSISVFKNGILNFTAYPCDGVY--ETVECVDNLGHSVN 401
Query: 1391 KLDNSN---KTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFT 1221
+D+++ K LWH LGHI++K I++L KDG L+ FD +S + CE+CLLGKMTK PF
Sbjct: 402 YIDSTSGVEKACLWHSRLGHISKKRIAQLQKDGVLESFDLKSDDVCESCLLGKMTKSPFK 461
Query: 1220 GHSERASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKT 1041
G ER L +IH D+CGPF+S + G + ++TFTDD SRY Y+Y +KHKS+T E FK
Sbjct: 462 GSFERGEGLLDIIHTDVCGPFRSTTKDGTRFYVTFTDDFSRYGYIYLIKHKSDTFEKFKE 521
Query: 1040 FMNEVEKQL 1014
F NEVE QL
Sbjct: 522 FKNEVENQL 530
Score = 141 bits (356), Expect(4) = e-114
Identities = 71/113 (62%), Positives = 83/113 (73%)
Frame = -2
Query: 1005 IKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSSV 826
IK + SDRGGEYLS EF D L++ GIVS TPP TPQ NGV+ERRN TLLDMV SMMS
Sbjct: 534 IKMLRSDRGGEYLSIEFLDYLKECGIVSQLTPPRTPQLNGVAERRNRTLLDMVRSMMSRA 593
Query: 825 KLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYV 667
LPI WGYALETA LN VP K + KT +E+W P+L+ +K+WGCEA+V
Sbjct: 594 SLPIHFWGYALETAAHILNLVPTKKVAKTPHEMWTGKVPSLAHIKVWGCEAFV 646
Score = 102 bits (253), Expect(4) = e-114
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
+GCKW+FKKKTDM+GKV T AR VAKGF + VDYDETFSPVA +KSIRI+LAI A+
Sbjct: 822 VGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFH 881
Query: 42 DYEIW 28
DYEIW
Sbjct: 882 DYEIW 886
Score = 82.8 bits (203), Expect(4) = e-114
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL +S++C+F+GYPK++ GY Y P + +FV VF E++ I E SG +DL+E+
Sbjct: 653 KLAERSERCFFLGYPKQSFGYLFYRPSEDVVFVARRAVFRERELIFKEDSGSTIDLEEIQ 712
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNVIKEP-HRPSRT*LDPKRFEFLMTRDSD---- 305
+ + E ++E+ + P + P R R + P+ + F +T D D
Sbjct: 713 ESSDDATLGETSNQHEEEVPV----GPTDVSLPLRRSGRVSMPPEFYGFHITSDGDTFVS 768
Query: 304 --ELGIADEPISYLEATKEPESEKWFEAI 224
L DEP +Y EA PES KW EA+
Sbjct: 769 DRTLINLDEPANYQEAVAGPESAKWKEAM 797
>ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 810
Score = 171 bits (432), Expect(4) = e-110
Identities = 85/167 (50%), Positives = 109/167 (65%)
Frame = -3
Query: 1514 INNGMISISKDEIFCENAPMSYGMYLLELETSIYNINTKRLKLDNSNKTYLWHYFLGHIN 1335
I G+ ++ +D+ E S ++ L +YNIN KR + ++ N T+ WH LGHIN
Sbjct: 99 IITGLRNMFEDQARAERFNTSKSLFACRL-AEVYNINAKRQRPNDLNPTFSWHCRLGHIN 157
Query: 1334 EKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSERASDFLGLIHIDICGPFK 1155
EK + +L++DG L FDFES ETCE+CLLGKMTK PFT SE AS+ L L++ D+CG
Sbjct: 158 EKRMEKLYRDGLLHSFDFESFETCESCLLGKMTKAPFTSQSEWASELLALVYTDVCGLMS 217
Query: 1154 SKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNEVEKQL 1014
S ARG + FITFT D SRY YVY M+ KSET E FK F NEV+ L
Sbjct: 218 STARGDFGYFITFTGDFSRYGYVYLMRQKSETFEKFKEFQNEVQNHL 264
Score = 110 bits (274), Expect(4) = e-110
Identities = 59/114 (51%), Positives = 70/114 (61%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
+IK + SDRGG+YLS EF + L++ IV T PGTPQ NGVSERRN TLLDM
Sbjct: 267 TIKYLRSDRGGKYLSLEFGNHLKECRIVPQLTLPGTPQWNGVSERRNRTLLDM------- 319
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYV 667
+ G FT+N+VP K + K YEIW RP+LS LKIWGCE YV
Sbjct: 320 ------LLGLRSRDTAFTINKVPSKSVDKIPYEIWTGKRPSLSFLKIWGCEVYV 367
Score = 97.4 bits (241), Expect(4) = e-110
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
I CKWVFKK TD++G V AR VAKGF+++Q VDYDETFSPVA++KSIRIVL I AY
Sbjct: 545 IKCKWVFKKNTDVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLTIAAYF 604
Query: 42 DYEIW 28
DYEIW
Sbjct: 605 DYEIW 609
Score = 93.6 bits (231), Expect(4) = e-110
Identities = 63/150 (42%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL PKSDKC+FVGY KET+GYY Y K+FV VFLEK+FIS + SG V L+E+
Sbjct: 374 KLTPKSDKCFFVGYHKETKGYYFYNREEGKVFVARHGVFLEKEFISRKDSGSMVRLEEIQ 433
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNVIKEP-------HRPSRT*LDPKRFEFLMTRD 311
+ E+ ++ E Q +V+ V V+ EP R R P R+ L T
Sbjct: 434 ETPENASTSTQPQQAE--QDVVQ-QVEQVVVEPVVEALASRRSKRIRRTPARYALLTTGQ 490
Query: 310 SDELGI-ADEPISYLEATKEPESEKWFEAI 224
D L + DEP Y EA P+SEKW A+
Sbjct: 491 RDILLLDNDEPTIYEEAMVGPDSEKWLGAM 520
>KYP31134.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 830
Score = 151 bits (381), Expect(4) = e-101
Identities = 69/115 (60%), Positives = 86/115 (74%)
Frame = -2
Query: 1017 TCNSIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SM 838
T ++K + SDRGGEYLS +F D L+++GI+S W PPGTPQHNGVSERRN TLLDMV SM
Sbjct: 328 TGKNVKVLRSDRGGEYLSNDFLDHLKENGILSQWKPPGTPQHNGVSERRNRTLLDMVKSM 387
Query: 837 MSSVKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEA 673
M LPI +WGYALE++ + LN+VP K + T YEIW +PNL +K+WGC A
Sbjct: 388 MGFTDLPINLWGYALESSAYLLNKVPTKSLSTTPYEIWKGRKPNLKHIKVWGCHA 442
Score = 121 bits (303), Expect(4) = e-101
Identities = 61/120 (50%), Positives = 73/120 (60%)
Frame = -3
Query: 1376 NKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSERASD 1197
NKTYLWH LGHI EK I++LHK+GYLD +D+ES T
Sbjct: 238 NKTYLWHCRLGHIGEKRINKLHKEGYLDQYDYESYTTY---------------------- 275
Query: 1196 FLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNEVEKQ 1017
+CGP K +A+GGY FITFTDD+SRY +VY MKHKSE+ EMFK F +EVEKQ
Sbjct: 276 --------VCGPMKIQAKGGYSYFITFTDDMSRYGFVYLMKHKSESFEMFKRFRSEVEKQ 327
Score = 95.9 bits (237), Expect(4) = e-101
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
IGCKWV+KKK +GKV+T AR VAKG+++ + +DYDETFSP+A++KSIRI+LAI AY
Sbjct: 653 IGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPMAMLKSIRILLAIAAYY 712
Query: 42 DYEIW 28
DYEIW
Sbjct: 713 DYEIW 717
Score = 73.9 bits (180), Expect(4) = e-101
Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 40/189 (21%)
Frame = -1
Query: 670 CYIKFPKKLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRN 491
C+ KL +S KC F+GYPKET GYY + P ++K+FV FLE++F++ G+
Sbjct: 440 CHALLRNKLEARSQKCRFIGYPKETMGYYFFHPSDHKVFVARGATFLEREFLAEGCHGKE 499
Query: 490 VDLKEV*DQ*ESREPKEVHKEYE------------------------------------- 422
+DL E+ + E+ +E E E
Sbjct: 500 IDLDEIQEASETTNAQEHEMENEQPFFDVLKLTQRLPSSTNLVEEPTIVQEQVNEPTLEQ 559
Query: 421 DSQTIVEFHVPNVIKEP-HRPSRT*LDPKRFEFLMTRDS--DELGIADEPISYLEATKEP 251
D Q + E I+ P R SR P R L+ D+ + D+P SY EA +
Sbjct: 560 DQQPLNEVQRDCTIQVPLRRSSREHRAPNRLNLLVHDDTTYEVDHNDDDPNSYEEAIRSL 619
Query: 250 ESEKWFEAI 224
+ EKW EA+
Sbjct: 620 DHEKWREAM 628
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 226 bits (576), Expect(2) = 2e-97
Identities = 108/185 (58%), Positives = 133/185 (71%), Gaps = 1/185 (0%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELETS-IYNINTKRLK 1389
+N+I SC+ G+ F N SI ++F +AP+ G+Y+L LE S IYNINT+R
Sbjct: 371 QNVISASCLQAEGYDFRSMNNGCSIYLRDMFYFHAPLVNGLYVLNLEASPIYNINTERQL 430
Query: 1388 LDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSE 1209
++ N T++WH LGHIN+K + +LHKDG L FDFES ETCE+CLLGKMTK PFTGHSE
Sbjct: 431 SNDINPTFIWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHSE 490
Query: 1208 RASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNE 1029
RASD L L+H D+CGP S ARGGYQ FITFTDD SRY Y+Y M+HKSE+ E FK F NE
Sbjct: 491 RASDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNE 550
Query: 1028 VEKQL 1014
V+ L
Sbjct: 551 VQNHL 555
Score = 160 bits (405), Expect(2) = 2e-97
Identities = 86/171 (50%), Positives = 105/171 (61%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
+IK + SDRGGEY+SQEF + L+D GIV TPPGTPQ NGVSERRN TLLDMV SMMS
Sbjct: 558 TIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQ 617
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYVI*NFLK 649
LP+ WGYALETA TLNRVP K ++KT YEIW P+LS LKIWGCEAYV
Sbjct: 618 SDLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCEAYVKRLQSD 677
Query: 648 SLDPNLTNAILLDTPRKLGDITYTHQLTTKCXXXXXLYFLKSNLFH*KLVG 496
L P ++ P++ + ++ K FL+ ++ G
Sbjct: 678 KLTPKSDKCFVVGYPKETKGYYFYNREQAKVFVARHGVFLEKEFLSRRVSG 728
Score = 100 bits (248), Expect(2) = 3e-37
Identities = 47/65 (72%), Positives = 54/65 (83%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
I CKW+FKKK DM+G V AR VAKGFK++Q VDYDETFSPVA++KSIRI+LAI AY
Sbjct: 839 IECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYF 898
Query: 42 DYEIW 28
DYEIW
Sbjct: 899 DYEIW 903
Score = 85.9 bits (211), Expect(2) = 3e-37
Identities = 59/143 (41%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL PKSDKC+ VGYPKET+GYY Y K+FV VFLEK+F+S +SG V L+EV
Sbjct: 678 KLTPKSDKCFVVGYPKETKGYYFYNREQAKVFVARHGVFLEKEFLSRRVSGIRVHLEEV- 736
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNV-IKEPHRPSRT*LDPKRFEFLMTRDSDELGI 293
P+ V E Q P V P R R+ P R+ RD L
Sbjct: 737 ----QETPETVSATTEPQQEDQSVAPPVVDTPAPRRSERSRRAPDRYTGAEQRDILLLD- 791
Query: 292 ADEPISYLEATKEPESEKWFEAI 224
DEP +Y EA +S KW A+
Sbjct: 792 NDEPKTYEEAMVGHDSNKWLGAM 814
>KZV22848.1 hypothetical protein F511_19440 [Dorcoceras hygrometricum]
Length = 672
Score = 138 bits (347), Expect(4) = 3e-95
Identities = 66/114 (57%), Positives = 80/114 (70%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
SIK++ SDRGGEYLS EF L+++GI++ WT P TPQ NGV+E RN TL+DMV SMMS
Sbjct: 107 SIKALRSDRGGEYLSAEFQHYLKENGILAQWTLPATPQLNGVAEHRNRTLMDMVRSMMSF 166
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYV 667
+LP WGYALETA LN V K + KT YE+W P S ++IWGC AYV
Sbjct: 167 TELPTSFWGYALETAVMLLNNVHTKAVDKTPYEMWMGKPPKYSYMRIWGCPAYV 220
Score = 118 bits (295), Expect(4) = 3e-95
Identities = 57/104 (54%), Positives = 67/104 (64%)
Frame = -3
Query: 1325 ISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSERASDFLGLIHIDICGPFKSKA 1146
+ ++ + D D SL TCE+CL GKMTK PF G ERA L LIH D+CGPF
Sbjct: 1 MKKIVRSDMFDLSDINSLPTCESCLKGKMTKQPFKGKGERAQSLLDLIHTDVCGPFSIGT 60
Query: 1145 RGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNEVEKQL 1014
+ G+ FITFTDD SRY Y+Y MKHKSE+ E FK F EVE QL
Sbjct: 61 KYGHTYFITFTDDYSRYGYLYLMKHKSESFERFKEFKAEVENQL 104
Score = 86.7 bits (213), Expect(4) = 3e-95
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = -2
Query: 219 GCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQD 40
GCKWV+ +K +GKV T AR VAKG+ + Q VDY+ETFSPVA+ KSIRI+LAI A+ D
Sbjct: 382 GCKWVYNRKLGPDGKVMTYKARLVAKGYAQRQGVDYNETFSPVAMFKSIRILLAIAAWYD 441
Query: 39 YEIW 28
YEIW
Sbjct: 442 YEIW 445
Score = 79.0 bits (193), Expect(4) = 3e-95
Identities = 52/142 (36%), Positives = 75/142 (52%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL +S CYFVGYPK + GY Y P K+FV F+E +F+ L+ G+ V+L+EV
Sbjct: 227 KLDTRSILCYFVGYPKNSIGYCFYYPSETKVFVSRNATFMEMEFL-LDRKGKIVELEEV- 284
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNVIKEPHRPSRT*LDPKRFEFLMTRDSDELGIA 290
REP EV E S E VP ++ P R R P+R+ FL+ D + +
Sbjct: 285 -----REPTEVPSE---SLAPTE-PVPEMV-APRRSERVPRAPERYGFLLEDDQGDQVVG 334
Query: 289 DEPISYLEATKEPESEKWFEAI 224
+P ++ EA + +S W EA+
Sbjct: 335 SDPRTFKEAISDADSNLWLEAM 356
>KYP42262.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 656
Score = 213 bits (542), Expect(2) = 2e-93
Identities = 104/185 (56%), Positives = 131/185 (70%), Gaps = 3/185 (1%)
Frame = -3
Query: 1562 NIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLL---ELETSIYNINTKRL 1392
NII +S +D +GF NN + SI + + N + +G+Y+L L ++ N KR
Sbjct: 296 NIISISMLDKHGFLTIFNNNICSIYRGDDLYVNGYLQHGIYVLPDVNLNPVMHVSNVKRK 355
Query: 1391 KLDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHS 1212
+ D NKTYLWH LGHI EK I++LHK+GYLD +D+ES TCE+CL GKMTK PFTG
Sbjct: 356 RDDQVNKTYLWHCRLGHIGEKRINKLHKEGYLDQYDYESYTTCESCLKGKMTKSPFTGKG 415
Query: 1211 ERASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMN 1032
ERAS+ LGLIH D+CGP K +A+GGY FITFTDD+SRY +VY MKHKSE+ EMFK F +
Sbjct: 416 ERASELLGLIHTDVCGPMKIQAKGGYSYFITFTDDMSRYGFVYLMKHKSESFEMFKRFRS 475
Query: 1031 EVEKQ 1017
EVEKQ
Sbjct: 476 EVEKQ 480
Score = 160 bits (404), Expect(2) = 2e-93
Identities = 81/166 (48%), Positives = 106/166 (63%)
Frame = -2
Query: 1017 TCNSIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SM 838
T ++K + SDRGGEYLS +F D L+++GI+S W PPGTPQHNGVSERRN TLLDMV SM
Sbjct: 481 TGKNVKVLRSDRGGEYLSNDFLDHLKENGILSQWKPPGTPQHNGVSERRNRTLLDMVKSM 540
Query: 837 MSSVKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYVI*N 658
M LPI +WGYALE++ + LN+VP K + T YEIW +PNL +K+WGC A +
Sbjct: 541 MGFTDLPINLWGYALESSAYLLNKVPTKSLSTTPYEIWKGRKPNLKHIKVWGCHALLRNC 600
Query: 657 FLKSLDPNLTNAILLDTPRKLGDITYTHQLTTKCXXXXXLYFLKSN 520
+L + + + L +K DI ++ LT KC F K N
Sbjct: 601 KQINLKQDHKSVVSLGILKKQWDIIFSTLLTIKCLWQEEQPFWKGN 646
>AAX94813.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] ABA93176.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 938
Score = 217 bits (553), Expect(2) = 6e-93
Identities = 100/185 (54%), Positives = 134/185 (72%), Gaps = 1/185 (0%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELE-TSIYNINTKRLK 1389
+N+I SC+ G+GF + S+ ++IF +APM G+Y++ L+ S+YNIN KR +
Sbjct: 256 KNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAKRQR 315
Query: 1388 LDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSE 1209
++ N T++WH LGHINE+ + +LH+DG L FDFES ETCE+CLLGKMTK PFTG SE
Sbjct: 316 PNDLNPTFIWHCRLGHINERRMEKLHRDGLLHSFDFESFETCESCLLGKMTKAPFTGQSE 375
Query: 1208 RASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNE 1029
+AS+ LGL+H D+CGP S ARGG+ FITFT+D SRY YVY M+HKS++ E FK F NE
Sbjct: 376 KASELLGLVHTDVCGPMSSTARGGFGYFITFTNDFSRYGYVYLMRHKSDSFEKFKEFQNE 435
Query: 1028 VEKQL 1014
V+ L
Sbjct: 436 VQNHL 440
Score = 154 bits (389), Expect(2) = 6e-93
Identities = 76/111 (68%), Positives = 84/111 (75%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
+IK + SDRGGEYLS EF + L++ GIV TPPGTPQ NGVSERRN TLLDMV SMMS
Sbjct: 443 TIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQ 502
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCE 676
LP+ WGY LETA FTLNRVP K + KT YEIW RP+LS LKIWGCE
Sbjct: 503 TDLPLSFWGYTLETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCE 553
>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 210 bits (534), Expect(3) = 8e-92
Identities = 100/185 (54%), Positives = 130/185 (70%), Gaps = 1/185 (0%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELE-TSIYNINTKRLK 1389
+N+I SC+ G+GF + S+ ++IF + PM G+Y++ L+ S+YNIN KR
Sbjct: 350 KNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIVNLDGCSVYNINAKRQC 409
Query: 1388 LDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSE 1209
+ N T++WH LGHINEK + +LH+DG L FDFES +T E+CLLGKMTK PFTG SE
Sbjct: 410 PNYLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFKTYESCLLGKMTKGPFTGQSE 469
Query: 1208 RASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNE 1029
RAS+ LGL+H D+CGP S ARGG+ FITFTDD S+Y YVY M+HKSE+ E FK F NE
Sbjct: 470 RASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSESFEKFKEFQNE 529
Query: 1028 VEKQL 1014
V+ L
Sbjct: 530 VQNHL 534
Score = 139 bits (351), Expect(3) = 8e-92
Identities = 72/111 (64%), Positives = 80/111 (72%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
+IK + SDRGGEYLS EF + ++ GIV TPPGTPQ N VSERRN TLLDMV SMMS
Sbjct: 537 TIKYLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAVSERRNRTLLDMVRSMMSQ 596
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCE 676
LP+ GYALET FTLN VP K + KT YEIW NRP+LS LKIWG E
Sbjct: 597 TNLPLSFSGYALETTAFTLNWVPSKSVDKTPYEIWTGNRPSLSFLKIWGYE 647
Score = 39.7 bits (91), Expect(3) = 8e-92
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = -1
Query: 613 GYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISG 497
GY +ET+GYY Y K+FV VFLEK+FIS + SG
Sbjct: 645 GY-EETKGYYFYNREEGKVFVARHGVFLEKEFISRKDSG 682
Score = 97.4 bits (241), Expect = 1e-17
Identities = 50/85 (58%), Positives = 59/85 (69%), Gaps = 6/85 (7%)
Frame = -2
Query: 264 LLRNQNLRNGSKPY------IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDET 103
+L L G K + I CKW FKKKTD++G V AR VAKGF+++Q VDYDET
Sbjct: 684 MLWKHRLHEGPKEFGVHLRAIECKWFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDET 743
Query: 102 FSPVAIVKSIRIVLAIVAYQDYEIW 28
F PVA++KSIRIVLAI AY DYEIW
Sbjct: 744 FLPVAMLKSIRIVLAIAAYFDYEIW 768
>XP_017233167.1 PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
carota subsp. sativus]
Length = 3860
Score = 141 bits (355), Expect(4) = 6e-91
Identities = 76/194 (39%), Positives = 107/194 (55%), Gaps = 11/194 (5%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYL-------LELETSIYN- 1410
RN+I VS + +G+ ++ + + I C + +Y+ L+L+ + N
Sbjct: 513 RNLISVSKLAMDGYNVCLDRNVSIMMNKRIICSGT-LQDNLYIINPSQPALQLQHRVLNN 571
Query: 1409 ---INTKRLKLDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKM 1239
+ KR + + N+TYLWH LGHIN + I RL DG L E CE+CL GKM
Sbjct: 572 TSSTSNKRKEPSSLNQTYLWHLRLGHINLRRIQRLVVDGPLGSLAVEPFPVCESCLEGKM 631
Query: 1238 TKIPFTGHSERASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSET 1059
T PF RA + LGL+H D+CGP +ARGGY+ F+TF DD SRY YVY ++ KSE
Sbjct: 632 TNRPFKAKGNRAKEVLGLVHSDLCGPMNIQARGGYEYFVTFIDDYSRYGYVYLLRRKSEC 691
Query: 1058 LEMFKTFMNEVEKQ 1017
E FK + + EK+
Sbjct: 692 FEKFKEYKAKTEKR 705
Score = 141 bits (355), Expect(4) = 6e-91
Identities = 76/194 (39%), Positives = 107/194 (55%), Gaps = 11/194 (5%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYL-------LELETSIYN- 1410
RN+I VS + +G+ ++ + + I C + +Y+ L+L+ + N
Sbjct: 1728 RNLISVSKLAMDGYNVCLDRNVSIMMNKRIICSGT-LQDNLYIINPSQPALQLQHRVLNN 1786
Query: 1409 ---INTKRLKLDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKM 1239
+ KR + + N+TYLWH LGHIN + I RL DG L E CE+CL GKM
Sbjct: 1787 TSSTSNKRKEPSSLNQTYLWHLRLGHINLRRIQRLVVDGPLGSLAVEPFPVCESCLEGKM 1846
Query: 1238 TKIPFTGHSERASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSET 1059
T PF RA + LGL+H D+CGP +ARGGY+ F+TF DD SRY YVY ++ KSE
Sbjct: 1847 TNRPFKAKGNRAKEVLGLVHSDLCGPMNIQARGGYEYFVTFIDDYSRYGYVYLLRRKSEC 1906
Query: 1058 LEMFKTFMNEVEKQ 1017
E FK + + EK+
Sbjct: 1907 FEKFKEYKAKTEKR 1920
Score = 141 bits (355), Expect(4) = 6e-91
Identities = 76/194 (39%), Positives = 107/194 (55%), Gaps = 11/194 (5%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYL-------LELETSIYN- 1410
RN+I VS + +G+ ++ + + I C + +Y+ L+L+ + N
Sbjct: 2943 RNLISVSKLAMDGYNVCLDRNVSIMMNKRIICSGT-LQDNLYIINPSQPALQLQHRVLNN 3001
Query: 1409 ---INTKRLKLDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKM 1239
+ KR + + N+TYLWH LGHIN + I RL DG L E CE+CL GKM
Sbjct: 3002 TSSTSNKRKEPSSLNQTYLWHLRLGHINLRRIQRLVVDGPLGSLAVEPFPVCESCLEGKM 3061
Query: 1238 TKIPFTGHSERASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSET 1059
T PF RA + LGL+H D+CGP +ARGGY+ F+TF DD SRY YVY ++ KSE
Sbjct: 3062 TNRPFKAKGNRAKEVLGLVHSDLCGPMNIQARGGYEYFVTFIDDYSRYGYVYLLRRKSEC 3121
Query: 1058 LEMFKTFMNEVEKQ 1017
E FK + + EK+
Sbjct: 3122 FEKFKEYKAKTEKR 3135
Score = 131 bits (330), Expect(4) = 6e-91
Identities = 65/115 (56%), Positives = 82/115 (71%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
SIKS+ SDRGGEYL EF + L ++GI S T PGTPQ NGV+ERRN TLL+ V SMMS
Sbjct: 709 SIKSLRSDRGGEYLLGEFREYLSENGIESQLTAPGTPQQNGVAERRNRTLLESVRSMMSY 768
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYVI 664
LP WG+ALETA + LN VP K + KT E+W ++P+L ++IWGC A+V+
Sbjct: 769 SDLPKSFWGHALETAAYLLNLVPSKSVPKTPLELWTGDKPSLRHIRIWGCPAHVL 823
Score = 131 bits (330), Expect(4) = 6e-91
Identities = 65/115 (56%), Positives = 82/115 (71%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
SIKS+ SDRGGEYL EF + L ++GI S T PGTPQ NGV+ERRN TLL+ V SMMS
Sbjct: 1924 SIKSLRSDRGGEYLLGEFREYLSENGIESQLTAPGTPQQNGVAERRNRTLLESVRSMMSY 1983
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYVI 664
LP WG+ALETA + LN VP K + KT E+W ++P+L ++IWGC A+V+
Sbjct: 1984 SDLPKSFWGHALETAAYLLNLVPSKSVPKTPLELWTGDKPSLRHIRIWGCPAHVL 2038
Score = 131 bits (330), Expect(4) = 6e-91
Identities = 65/115 (56%), Positives = 82/115 (71%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
SIKS+ SDRGGEYL EF + L ++GI S T PGTPQ NGV+ERRN TLL+ V SMMS
Sbjct: 3139 SIKSLRSDRGGEYLLGEFREYLSENGIESQLTAPGTPQQNGVAERRNRTLLESVRSMMSY 3198
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYVI 664
LP WG+ALETA + LN VP K + KT E+W ++P+L ++IWGC A+V+
Sbjct: 3199 SDLPKSFWGHALETAAYLLNLVPSKSVPKTPLELWTGDKPSLRHIRIWGCPAHVL 3253
Score = 85.1 bits (209), Expect(4) = 6e-91
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -2
Query: 237 GSKPYIGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLA 58
G KP IGCKWV+KKK + KV+ AR VAKG+ + + +DY+ETFSPV ++KSIRI+L+
Sbjct: 987 GVKP-IGCKWVYKKKRGSDKKVKAWKARLVAKGYTQKEGIDYEETFSPVVMLKSIRILLS 1045
Query: 57 IVAYQDYEIW 28
I A+ DYEIW
Sbjct: 1046 IAAHLDYEIW 1055
Score = 85.1 bits (209), Expect(4) = 6e-91
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -2
Query: 237 GSKPYIGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLA 58
G KP IGCKWV+KKK + KV+ AR VAKG+ + + +DY+ETFSPV ++KSIRI+L+
Sbjct: 2202 GVKP-IGCKWVYKKKRGSDKKVKAWKARLVAKGYTQKEGIDYEETFSPVVMLKSIRILLS 2260
Query: 57 IVAYQDYEIW 28
I A+ DYEIW
Sbjct: 2261 IAAHLDYEIW 2270
Score = 85.1 bits (209), Expect(4) = 6e-91
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -2
Query: 237 GSKPYIGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLA 58
G KP IGCKWV+KKK + KV+ AR VAKG+ + + +DY+ETFSPV ++KSIRI+L+
Sbjct: 3417 GVKP-IGCKWVYKKKRGSDKKVKAWKARLVAKGYTQKEGIDYEETFSPVVMLKSIRILLS 3475
Query: 57 IVAYQDYEIW 28
I A+ DYEIW
Sbjct: 3476 IAAHLDYEIW 3485
Score = 49.7 bits (117), Expect(4) = 6e-91
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL +++ FVGYP T+GY Y+P + + V FLE+ +I ++ L+E+
Sbjct: 829 KLESRTEVKLFVGYPMGTKGYLFYSPKDRDVTVSTNARFLEEDYIMNHKPMSSIVLEELV 888
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNVIKEPHRPSRT*LDPKRFEFLMTRDSDELGIA 290
+ +V + + Q V N P R R P RF FL +S +L
Sbjct: 889 GGTNNEPVVQVEQPQQTVQP-----VTNTAPVPRRSGRVVRQPDRFMFL--GESSDLVSG 941
Query: 289 ---DEPISYLEATKEPESEKWFEAI 224
D+P +Y EA ++ ++ W +A+
Sbjct: 942 EHDDDPRTYEEAIQDKDASLWQKAM 966
Score = 49.7 bits (117), Expect(4) = 6e-91
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL +++ FVGYP T+GY Y+P + + V FLE+ +I ++ L+E+
Sbjct: 2044 KLESRTEVKLFVGYPMGTKGYLFYSPKDRDVTVSTNARFLEEDYIMNHKPMSSIVLEELV 2103
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNVIKEPHRPSRT*LDPKRFEFLMTRDSDELGIA 290
+ +V + + Q V N P R R P RF FL +S +L
Sbjct: 2104 GGTNNEPVVQVEQPQQTVQP-----VTNTAPVPRRSGRVVRQPDRFMFL--GESSDLVSG 2156
Query: 289 ---DEPISYLEATKEPESEKWFEAI 224
D+P +Y EA ++ ++ W +A+
Sbjct: 2157 EHDDDPRTYEEAIQDKDASLWQKAM 2181
Score = 49.7 bits (117), Expect(4) = 6e-91
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 3/145 (2%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL +++ FVGYP T+GY Y+P + + V FLE+ +I ++ L+E+
Sbjct: 3259 KLESRTEVKLFVGYPMGTKGYLFYSPKDRDVTVSTNARFLEEDYIMNHKPMSSIVLEELV 3318
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNVIKEPHRPSRT*LDPKRFEFLMTRDSDELGIA 290
+ +V + + Q V N P R R P RF FL +S +L
Sbjct: 3319 GGTNNEPVVQVEQPQQTVQP-----VTNTAPVPRRSGRVVRQPDRFMFL--GESSDLVSG 3371
Query: 289 ---DEPISYLEATKEPESEKWFEAI 224
D+P +Y EA ++ ++ W +A+
Sbjct: 3372 EHDDDPRTYEEAIQDKDASLWQKAM 3396
>ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 211 bits (536), Expect(2) = 1e-90
Identities = 101/185 (54%), Positives = 129/185 (69%), Gaps = 1/185 (0%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELE-TSIYNINTKRLK 1389
+N+I SC+ G+GF + S+ ++IF +APM G+Y++ L+ SIYNIN KR
Sbjct: 847 KNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMSGLYIVNLDGCSIYNINAKRQG 906
Query: 1388 LDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSE 1209
++ N T++WH LGHINEK + +LH+DG L DFES ETCE+CLLGKMTK PFTG SE
Sbjct: 907 PNDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSLDFESFETCESCLLGKMTKAPFTGQSE 966
Query: 1208 RASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNE 1029
R S+ L L+H D+CGP S AR G+ FITFTDD SRY YVY M+HKSE+ E FK F NE
Sbjct: 967 RTSELLVLVHTDVCGPMSSTARCGFGYFITFTDDFSRYGYVYLMRHKSESFEKFKEFQNE 1026
Query: 1028 VEKQL 1014
V+ L
Sbjct: 1027 VQNHL 1031
Score = 152 bits (385), Expect(2) = 1e-90
Identities = 90/187 (48%), Positives = 105/187 (56%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
+IK + SD GGEYLS EF + L+ GIV TPPGTPQ NGVSERRN TLL+MV SMMS
Sbjct: 1034 TIKYLRSDHGGEYLSLEFGNHLKGCGIVPQLTPPGTPQWNGVSERRNRTLLNMVRSMMSQ 1093
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYVI*NFLK 649
L + WGYALETA FTLNRVP K + KT YEIW RP+LS LKIWGCE YV
Sbjct: 1094 TNLLLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKIWGCEVYVKRLQSD 1153
Query: 648 SLDPNLTNAILLDTPRKLGDITYTHQLTTKCXXXXXLYFLKSNLFH*KLVGGM*ISKKFE 469
L P + P++ ++ K FLK K G I + E
Sbjct: 1154 KLTPKSNKCFFVGYPKETKGYYLYNREEGKVFVARHGVFLKKEFISRKDSGS--IVRLEE 1211
Query: 468 INKKAEN 448
I + EN
Sbjct: 1212 IQETPEN 1218
Score = 95.9 bits (237), Expect(2) = 2e-38
Identities = 46/65 (70%), Positives = 54/65 (83%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
I CKWVFKKKT ++G V AR VAKGF+++Q VDYDETFSPVA++KSI+IVLAI AY
Sbjct: 1325 IECKWVFKKKTYVDGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIQIVLAIAAYF 1384
Query: 42 DYEIW 28
DYEIW
Sbjct: 1385 DYEIW 1389
Score = 93.6 bits (231), Expect(2) = 2e-38
Identities = 61/145 (42%), Positives = 83/145 (57%), Gaps = 7/145 (4%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL PKS+KC+FVGYPKET+GYYLY K+FV VFL+K+FIS + SG V L+E+
Sbjct: 1154 KLTPKSNKCFFVGYPKETKGYYLYNREEGKVFVARHGVFLKKEFISRKDSGSIVRLEEIQ 1213
Query: 469 DQ*E----SREPKEVHKEYEDSQTIVEFHVPNVIKEP--HRPSRT*LDPKRFEFLMTRDS 308
+ E S +P++ E + Q + + V V++ P R R P R+ L
Sbjct: 1214 ETPENASTSTQPQQA--EQDVVQQVEQVVVEPVVEAPASRRSERIRRTPARYALLTIGQR 1271
Query: 307 DELGIA-DEPISYLEATKEPESEKW 236
D L + DEP +Y EA P+SEKW
Sbjct: 1272 DILLLDNDEPTTYEEAMVGPDSEKW 1296
>KYP68472.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 676
Score = 157 bits (398), Expect(4) = 2e-90
Identities = 72/117 (61%), Positives = 89/117 (76%)
Frame = -2
Query: 1017 TCNSIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SM 838
T ++K + SDRGGEYLS +F D L+++GI+S WTPPGTPQHNGVSERRN TLLDMV SM
Sbjct: 56 TGKNVKVLRSDRGGEYLSNDFLDHLKENGILSQWTPPGTPQHNGVSERRNRTLLDMVRSM 115
Query: 837 MSSVKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYV 667
M LPI +WGYALE++ + LN+VP K + T YEIW +PNL +K+WGC AYV
Sbjct: 116 MGFTDLPINLWGYALESSAYLLNKVPTKSLSTTPYEIWKGRKPNLKHIKVWGCHAYV 172
Score = 95.9 bits (237), Expect(4) = 2e-90
Identities = 43/65 (66%), Positives = 55/65 (84%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
IGCKWV+KKK +GKV+T AR VAKG+++ + +DYDETFSP+A++KSIRI+LAI AY
Sbjct: 385 IGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPMAMLKSIRILLAIAAYY 444
Query: 42 DYEIW 28
DYEIW
Sbjct: 445 DYEIW 449
Score = 82.4 bits (202), Expect(4) = 2e-90
Identities = 36/55 (65%), Positives = 43/55 (78%)
Frame = -3
Query: 1181 HIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNEVEKQ 1017
H D+CGP K +A+GGY FI FTDD+SRY +VY MKHKS + EMFK F +EVEKQ
Sbjct: 1 HTDVCGPMKIQAKGGYSYFIAFTDDMSRYGFVYLMKHKSGSFEMFKIFRSEVEKQ 55
Score = 70.1 bits (170), Expect(4) = 2e-90
Identities = 54/182 (29%), Positives = 80/182 (43%), Gaps = 40/182 (21%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL +S KC F+GYPKET YY + P ++K+FV FLE++F++ G+ +DL E+
Sbjct: 179 KLEARSQKCRFIGYPKETMRYYFFHPFDHKVFVARGATFLEREFLAEGCHGKEIDLDEIQ 238
Query: 469 DQ*ESREPKEVHKEYE-------------------------------------DSQTIVE 401
+ E+ +E E E D Q + E
Sbjct: 239 EASETTNAQEHEMENEQPFFDVLKLMQRLPSSTNLVEEPTIVQEQVNEPTLEQDQQPLNE 298
Query: 400 FHVPNVIKEP-HRPSRT*LDPKRFEFLMTRDSD-ELGIA-DEPISYLEATKEPESEKWFE 230
I+ P R SR P R L+ D+ E+ + D+P SY EA + + EKW E
Sbjct: 299 VQRDCTIQVPLRRSSREHRAPNRLNLLVHDDTTYEVDHSDDDPNSYEEAIRSLDHEKWRE 358
Query: 229 AI 224
A+
Sbjct: 359 AM 360
>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 210 bits (534), Expect(3) = 9e-90
Identities = 100/185 (54%), Positives = 130/185 (70%), Gaps = 1/185 (0%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELE-TSIYNINTKRLK 1389
+N+I SC+ G+GF + S+ ++IF + PM G+Y++ L+ S+YNIN KR
Sbjct: 423 KNVISASCLQAEGYGFRSVDNGCSVYYNDIFYFHVPMMNGLYIVNLDGCSVYNINAKRQC 482
Query: 1388 LDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSE 1209
+ N T++WH LGHINEK + +LH+DG L FDFES +T E+CLLGKMTK PFTG SE
Sbjct: 483 PNYLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFKTYESCLLGKMTKGPFTGQSE 542
Query: 1208 RASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNE 1029
RAS+ LGL+H D+CGP S ARGG+ FITFTDD S+Y YVY M+HKSE+ E FK F NE
Sbjct: 543 RASELLGLVHTDVCGPMSSTARGGFGYFITFTDDFSKYGYVYLMRHKSESFEKFKEFQNE 602
Query: 1028 VEKQL 1014
V+ L
Sbjct: 603 VQNHL 607
Score = 144 bits (362), Expect(3) = 9e-90
Identities = 74/114 (64%), Positives = 82/114 (71%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
+IK + SDRGGEYLS EF + ++ GIV TPPGTPQ N VSERRN TLLDMV SMMS
Sbjct: 610 TIKYLRSDRGGEYLSLEFGNHRKECGIVPQLTPPGTPQWNAVSERRNRTLLDMVRSMMSQ 669
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYV 667
LP+ GYALET FTLN VP K + KT YEIW NRP+LS LKIWG E YV
Sbjct: 670 TNLPLSFSGYALETTAFTLNWVPSKSVDKTPYEIWTGNRPSLSFLKIWGYEVYV 723
Score = 28.5 bits (62), Expect(3) = 9e-90
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -1
Query: 649 KLGPKSDKCYFVG 611
KL PKSDKC+FVG
Sbjct: 730 KLTPKSDKCFFVG 742
Score = 96.7 bits (239), Expect = 3e-17
Identities = 46/65 (70%), Positives = 53/65 (81%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
I CKW FKKKTD++G V AR VAKGF+++Q VDYDETF PVA++KSIRIVLAI AY
Sbjct: 762 IECKWFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYF 821
Query: 42 DYEIW 28
DYEIW
Sbjct: 822 DYEIW 826
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 219 bits (559), Expect(2) = 9e-88
Identities = 104/185 (56%), Positives = 135/185 (72%), Gaps = 1/185 (0%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELETS-IYNINTKRLK 1389
RNII SC+ T G+ F I + SI +++F AP+ G+++L L+ + I+NIN KRL+
Sbjct: 459 RNIISASCLMTEGYKFIIEDHGCSIFLNDMFYGYAPVLNGLFILNLDDAPIFNINAKRLR 518
Query: 1388 LDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSE 1209
+N N T++WH LGHI+EK + +LH DG L+ FD ES ETCE+C+LGKMTK PFTG +E
Sbjct: 519 PNNMNSTFIWHCRLGHISEKRMKKLHDDGILNSFDLESFETCESCILGKMTKTPFTGRNE 578
Query: 1208 RASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNE 1029
RASD L LIH D+CGP + ARGG+Q FITFTDD SRY Y+Y M+HKSE+ E FK F NE
Sbjct: 579 RASDLLALIHTDVCGPMSTTARGGFQYFITFTDDYSRYGYIYLMRHKSESFEKFKEFQNE 638
Query: 1028 VEKQL 1014
V+ QL
Sbjct: 639 VQNQL 643
Score = 134 bits (338), Expect(2) = 9e-88
Identities = 69/106 (65%), Positives = 77/106 (72%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
+IKS+ SDRGGE+LSQEF + L+ GIV TPP TPQ NGVSER N TLLDMV MMS
Sbjct: 646 TIKSLRSDRGGEFLSQEFGNHLKQCGIVPQLTPPSTPQWNGVSERCNRTLLDMVRLMMSQ 705
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLK 691
LP+ WGYALETA FTLNRVP K + KT YEIW P+LS LK
Sbjct: 706 SDLPLYFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKSPSLSFLK 751
Score = 95.5 bits (236), Expect(2) = 2e-19
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
I CKW++KKK DM+G V AR VAKGF++VQ VDYDETFS VA++KSIRI+LAI AY
Sbjct: 835 IECKWIYKKKIDMDGNVHIHKARLVAKGFRQVQGVDYDETFSLVAMLKSIRIILAIAAYF 894
Query: 42 DYEIW 28
DYEIW
Sbjct: 895 DYEIW 899
Score = 30.4 bits (67), Expect(2) = 2e-19
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 289 DEPISYLEATKEPESEKWFEAI 224
DEP +Y EA +P+SEKW A+
Sbjct: 789 DEPNTYKEAMMDPDSEKWLGAM 810
>CAE03845.1 OSJNBb0089K06.4 [Oryza sativa Japonica Group]
Length = 873
Score = 183 bits (464), Expect(2) = 3e-84
Identities = 85/136 (62%), Positives = 102/136 (75%)
Frame = -3
Query: 1421 SIYNINTKRLKLDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGK 1242
+ YNIN KR + ++ N T++WH LGHINEK + +LH+DG L FDFES ET E CLLGK
Sbjct: 214 NFYNINAKRQRPNDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETYEFCLLGK 273
Query: 1241 MTKIPFTGHSERASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSE 1062
MTK PFTG SER+S+ LGL+HID+C P S ARGG+ FITFTDD SRY YVY M+HKSE
Sbjct: 274 MTKAPFTGQSERSSELLGLVHIDVCEPMSSTARGGFGYFITFTDDFSRYVYVYLMRHKSE 333
Query: 1061 TLEMFKTFMNEVEKQL 1014
+ E FK F NEV+ L
Sbjct: 334 SFEKFKEFQNEVQNHL 349
Score = 159 bits (403), Expect(2) = 3e-84
Identities = 91/187 (48%), Positives = 109/187 (58%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
+IK + SDRGGEYLS EF + L++ GIV TPPGTPQ N VSERRN TLLDMV SMMS
Sbjct: 352 TIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNRVSERRNRTLLDMVQSMMSQ 411
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYVI*NFLK 649
LP+ WGYALETA FTLNRVP K + KT+YEIW RP+LS LKIWGCE YV
Sbjct: 412 TDLPLCFWGYALETAAFTLNRVPSKSVDKTSYEIWTGKRPSLSFLKIWGCEVYVKRLQSD 471
Query: 648 SLDPNLTNAILLDTPRKLGDITYTHQLTTKCXXXXXLYFLKSNLFH*KLVGGM*ISKKFE 469
L P + P++ + ++ K FL+ K G M + E
Sbjct: 472 KLTPKSDKCFFVGYPKETKGYYFYNREEGKVFVARHSVFLEKEFISRKDSGSM--VRPEE 529
Query: 468 INKKAEN 448
I + EN
Sbjct: 530 IQETPEN 536
Score = 86.7 bits (213), Expect = 4e-14
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = -2
Query: 207 VFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQDYEIW 28
VFKKKTD++G V AR V KGF+++Q VDYDETFSP A++KSIRIVLA+ AY DYEIW
Sbjct: 553 VFKKKTDVDGNVYIYKARLVVKGFRQIQGVDYDETFSPAAMLKSIRIVLAVAAYFDYEIW 612
>CAN81793.1 hypothetical protein VITISV_020571 [Vitis vinifera]
Length = 1193
Score = 137 bits (345), Expect(4) = 1e-81
Identities = 78/191 (40%), Positives = 107/191 (56%), Gaps = 7/191 (3%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELETS-------IYNI 1407
RN+I VSC+D G+ NGM+S+ + ++ +Y L ++ + N
Sbjct: 227 RNLISVSCLDKFGYCCSFGNGMVSLYLNSNIIGIGSLTDKLYKLNIKATNGNETLHSSNY 286
Query: 1406 NTKRLKLDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIP 1227
KR KL N N + LWH LGHI+ + I RL +G LD DF + C C+ GK T +
Sbjct: 287 GIKR-KLMNENSSMLWHKRLGHISNQQIQRLVLEGILDPLDFSDFQVCIECIKGKQTNMR 345
Query: 1226 FTGHSERASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMF 1047
++ R SD L LIH DICGPF + + G Q FITF DD SRY Y+Y + KS++L++F
Sbjct: 346 -KKNANRCSDVLELIHTDICGPFPTPSWNGQQYFITFIDDYSRYGYLYLINEKSQSLDVF 404
Query: 1046 KTFMNEVEKQL 1014
K F EVE QL
Sbjct: 405 KNFKAEVENQL 415
Score = 115 bits (289), Expect(4) = 1e-81
Identities = 59/121 (48%), Positives = 75/121 (61%), Gaps = 10/121 (8%)
Frame = -2
Query: 1005 IKSVHSDRGGEYLSQ----------EFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLL 856
IK+V SDRGGEY + F L + GIV +T PGTP NGV+ERRN TL
Sbjct: 419 IKAVRSDRGGEYYGRYDGSGEQRPGPFAKYLMECGIVPQYTMPGTPSQNGVAERRNRTLK 478
Query: 855 DMV*SMMSSVKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCE 676
DMV SM+S LP +WG A++TA + LNRVP K + KT YE+W +P++ L +WGC
Sbjct: 479 DMVRSMISHSTLPESLWGEAIKTAVYILNRVPSKAVAKTPYELWTSKKPSIRHLHVWGCP 538
Query: 675 A 673
A
Sbjct: 539 A 539
Score = 74.7 bits (182), Expect(4) = 1e-81
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = -2
Query: 246 LRNGSKPYIGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRI 67
L G KP IGCKW+FK K D G + AR VAKGF + + +DY ETFSPV+ S RI
Sbjct: 740 LPKGVKP-IGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRI 798
Query: 66 VLAIVAYQDYEI 31
++A+VA+ D E+
Sbjct: 799 IMALVAHYDLEL 810
Score = 48.5 bits (114), Expect(4) = 1e-81
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 38/181 (20%)
Frame = -1
Query: 652 KKLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV 473
KKL ++ CYFVGY + +RG+ Y P F F+E +E+SGR K V
Sbjct: 549 KKLDSRTVSCYFVGYSERSRGFKFYDPSTRSFFETGNAKFIE----DVELSGREPLRKVV 604
Query: 472 *DQ--------------------------------------*ESREPKEVHKEYEDSQTI 407
++ + EP +VH+E
Sbjct: 605 FEEEFVNIPIIATGHGHIMFNDTIQNVQSITGIQDTPEIPPAQVMEPIQVHQEVTQQPQE 664
Query: 406 VEFHVPNVIKEPHRPSRT*LDPKRFEFLMTRDSDELGIADEPISYLEATKEPESEKWFEA 227
+ VP ++ R R+ + + + D +G+ D+PIS + + SEKW E
Sbjct: 665 PQVQVP--LRRSTRERRSTISDDYVVYFQEHEFD-MGLEDDPISVSQVKQSSNSEKWIEV 721
Query: 226 I 224
+
Sbjct: 722 M 722
>CAN64073.1 hypothetical protein VITISV_038270 [Vitis vinifera]
Length = 1181
Score = 133 bits (334), Expect(4) = 2e-79
Identities = 75/184 (40%), Positives = 100/184 (54%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELETSIYNINTKRLKL 1386
RN+I VSC+D G+ NGM + + + N YG+ + KL
Sbjct: 220 RNLISVSCLDKFGYCCSFGNGMATNGNETLHSSN----YGI---------------KRKL 260
Query: 1385 DNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSER 1206
N N + LWH LGHI+ + I RL +G LD DF + C C+ GK T + ++ R
Sbjct: 261 MNENSSMLWHKRLGHISNQRIQRLVSEGILDPLDFSDFQVCIECIKGKQTNMR-KKNANR 319
Query: 1205 ASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNEV 1026
SD L LIH DICGPF + + G Q FITF DD SRY Y+Y + KS++L++FK F EV
Sbjct: 320 CSDVLELIHTDICGPFPTPSWNGQQYFITFIDDYSRYGYLYLIHEKSQSLDVFKNFKAEV 379
Query: 1025 EKQL 1014
E QL
Sbjct: 380 ENQL 383
Score = 110 bits (275), Expect(4) = 2e-79
Identities = 56/111 (50%), Positives = 71/111 (63%)
Frame = -2
Query: 1005 IKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSSV 826
IK+V SDRGG F L + GIV +T PGTP NGV+ERRN TL DMV SM+S
Sbjct: 387 IKAVRSDRGGP-----FAKYLMECGIVPQYTMPGTPSQNGVAERRNRTLKDMVRSMISHS 441
Query: 825 KLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEA 673
LP +WG A++TA + LNRV K + KT YE+W +P++ L +WGC A
Sbjct: 442 TLPESLWGXAIKTAVYILNRVXSKAVAKTPYELWTSKKPSIRHLHVWGCPA 492
Score = 74.7 bits (182), Expect(4) = 2e-79
Identities = 37/72 (51%), Positives = 48/72 (66%)
Frame = -2
Query: 246 LRNGSKPYIGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRI 67
L G KP IGCKW+FK K D G + AR VAKGF + + +DY ETFSPV+ S RI
Sbjct: 693 LPKGVKP-IGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRI 751
Query: 66 VLAIVAYQDYEI 31
++A+VA+ D E+
Sbjct: 752 IMALVAHYDLEL 763
Score = 50.4 bits (119), Expect(4) = 2e-79
Identities = 44/181 (24%), Positives = 69/181 (38%), Gaps = 38/181 (20%)
Frame = -1
Query: 652 KKLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV 473
KKL ++ CYFVGY + +RG+ Y P F F+E +E+SGR K V
Sbjct: 502 KKLDSRTVSCYFVGYSERSRGFKFYDPSTRSFFETGNAKFIE----DVELSGREPLRKVV 557
Query: 472 *DQ--------------------------------------*ESREPKEVHKEYEDSQTI 407
++ + EP +VH+E
Sbjct: 558 FEEEFVNIPIITTGHGHIMFNDTIQNVQSITGIQDTPEIPPXQVXEPIQVHQEVTQQPQE 617
Query: 406 VEFHVPNVIKEPHRPSRT*LDPKRFEFLMTRDSDELGIADEPISYLEATKEPESEKWFEA 227
VP ++ R R+ + +L + D +G+ D+PIS + + SEKW EA
Sbjct: 618 PXVQVP--LRRSTRERRSTISDDYVVYLQEHEFD-MGLEDDPISVSQVKQSSNSEKWIEA 674
Query: 226 I 224
+
Sbjct: 675 M 675
>KZV20448.1 retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Dorcoceras hygrometricum]
Length = 444
Score = 148 bits (373), Expect(3) = 5e-78
Identities = 71/114 (62%), Positives = 81/114 (71%)
Frame = -2
Query: 1008 SIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSS 829
SIK++ SDRGGEYLS EF D LR++GI+S WTPP TPQ NGV+ERRN T DMV SMMS
Sbjct: 120 SIKALRSDRGGEYLSAEFQDYLRENGILSQWTPPATPQLNGVAERRNRTFFDMVRSMMSF 179
Query: 828 VKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYV 667
+LP WGYALETA LN V K + KT YEIW P S ++IWGC AYV
Sbjct: 180 TELPTSFWGYALETAVMLLNNVHTKAVDKTPYEIWMGKPPKYSFMRIWGCPAYV 233
Score = 126 bits (317), Expect(3) = 5e-78
Identities = 61/117 (52%), Positives = 76/117 (64%)
Frame = -3
Query: 1364 LWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSERASDFLGL 1185
LWH LGH++ +++L + D D SL TCE+CL GK+TK PF G ERA D L L
Sbjct: 1 LWHARLGHVSLSRMNKLVRSDLFDLSDINSLPTCESCLKGKITKHPFKGKGERAQDLLDL 60
Query: 1184 IHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNEVEKQL 1014
IH D+CG F + G+ FITFTDD SRY Y+Y MK+KSE+ E FK F +VE QL
Sbjct: 61 IHTDVCGLFSIGTKYGHTYFITFTDDYSRYGYLYLMKYKSESFERFKEFKAKVENQL 117
Score = 68.6 bits (166), Expect(3) = 5e-78
Identities = 48/121 (39%), Positives = 66/121 (54%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL +S CYF+GYPK + GYY Y P K+FV F+E++ + L+ GR V+L+EV
Sbjct: 240 KLDTRSILCYFIGYPKNSIGYYFYYPSETKVFVSRNATFMERELL-LDRKGRIVELEEV- 297
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNVIKEPHRPSRT*LDPKRFEFLMTRDSDELGIA 290
REP EV E S E VP+++ P R R P+R+ FL+ D+ GI
Sbjct: 298 -----REPTEVPSE---SPAPTE-PVPDMV-APRRSERIPRAPERYGFLL---EDDQGIT 344
Query: 289 D 287
D
Sbjct: 345 D 345
>AMY96445.1 gag/pol protein [Momordica dioica]
Length = 1313
Score = 171 bits (434), Expect(2) = 9e-76
Identities = 94/194 (48%), Positives = 120/194 (61%), Gaps = 10/194 (5%)
Frame = -3
Query: 1565 RNIIYVSCMDTNGF--GFYINNGMISISKDEIFCENAPMSYGMYLLELE--------TSI 1416
RN+I ++C+ + + F +N I + K C +AP+ G Y L T I
Sbjct: 376 RNLISIACILEHIYTISFEVNEVFI-LCKGIQIC-HAPIVRGFYKLRPTRANVVLNTTHI 433
Query: 1415 YNINTKRLKLDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMT 1236
+N+ T+ K +N + YLWH LGHIN I +LHKDG L+ + SL CE+CL GKMT
Sbjct: 434 HNLETQNKKQNNDSAMYLWHLRLGHINLNRIEKLHKDGLLEQLEDFSLPPCESCLEGKMT 493
Query: 1235 KIPFTGHSERASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETL 1056
K PFTG RASD L LIH D+CGP KARGGYQ F++FTDDLSRY YVY +KHKSE+
Sbjct: 494 KRPFTGKGLRASDLLELIHTDVCGPMSVKARGGYQYFLSFTDDLSRYGYVYLLKHKSESF 553
Query: 1055 EMFKTFMNEVEKQL 1014
E FK F EVE ++
Sbjct: 554 EKFKEFQAEVENEI 567
Score = 142 bits (359), Expect(2) = 9e-76
Identities = 77/160 (48%), Positives = 96/160 (60%)
Frame = -2
Query: 1005 IKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSSV 826
IK++ SDRGGEY+S EF D LR+ GIVS + PGTPQ NGVSERRN TLLDMV SMMS
Sbjct: 571 IKTLRSDRGGEYMSSEFGDHLREFGIVSQLSAPGTPQCNGVSERRNRTLLDMVRSMMSYA 630
Query: 825 KLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYVI*NFLKS 646
LP WGYA E LNRVP K +++T YE+W + +LS LKIWGC A+V K
Sbjct: 631 DLPDSFWGYARERERAILNRVPSKSVEETPYELWYGRKSSLSFLKIWGCPAHVKKLQPKK 690
Query: 645 LDPNLTNAILLDTPRKLGDITYTHQLTTKCXXXXXLYFLK 526
L+P + + P++ + H K FL+
Sbjct: 691 LEPRSEKCLFVGYPKETRGYYFYHPQENKVFVATNEAFLE 730
Score = 88.2 bits (217), Expect(2) = 9e-34
Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
Frame = -1
Query: 655 PKKLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKE 476
PKKL P+S+KC FVGYPKETRGYY Y P NK+FV FLEK+F+S G + LK
Sbjct: 688 PKKLEPRSEKCLFVGYPKETRGYYFYHPQENKVFVATNEAFLEKEFLSRHQPGSKIVLKA 747
Query: 475 V---------*DQ*ESREPKEVHK-EYEDSQTIVEFHVPN--VIKEPHRPSRT*LDPKRF 332
V D+ S V K E D Q+ H P+ ++ P R R+ P R+
Sbjct: 748 VVEPLIPLDGTDKPSSSTKVVVDKAEVNDDQS----HTPDQQELRVPRRSGRSRRAPNRY 803
Query: 331 -----EFLMTRDSDELGIADEPISYLEATKEPESEKWFEAI 224
+M D+ E ++P +Y +A P+S++W +A+
Sbjct: 804 LGLVETQIMILDNGE----EDPTNYKQAMVGPDSDQWLKAM 840
Score = 85.9 bits (211), Expect(2) = 9e-34
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = -2
Query: 249 NLRNGSKPYIGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIR 70
+L + KP IGCKW++KKK D + V AR VAKGF + + Y+ETFSPVA++KSIR
Sbjct: 857 DLPSDVKP-IGCKWIYKKKRDQDSNVTVFKARLVAKGFTRSLSLSYEETFSPVAMLKSIR 915
Query: 69 IVLAIVAYQDYEIW 28
I+LAI A+ DYEIW
Sbjct: 916 IILAIAAFFDYEIW 929
>ABG22008.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 137 bits (344), Expect(3) = 8e-72
Identities = 70/108 (64%), Positives = 76/108 (70%)
Frame = -2
Query: 990 SDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRNHTLLDMV*SMMSSVKLPIL 811
S+R E L + D + GIV TPPGTPQ NGVSERRN TLLDMV SMMS LP+
Sbjct: 238 SERASELLGLVYTD---ECGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQTDLPLS 294
Query: 810 IWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKIWGCEAYV 667
WGYALETA FTLNRVP K + KT YEIW RP+LS LKIWGCE YV
Sbjct: 295 FWGYALETAAFTLNRVPSKSLDKTPYEIWTGKRPSLSFLKIWGCEVYV 342
Score = 93.2 bits (230), Expect(3) = 8e-72
Identities = 44/65 (67%), Positives = 52/65 (80%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
I CKWVFKKKTD++G V AR VAKGF+++Q VDYD TFS V ++KSIRI+LAI AY
Sbjct: 520 IECKWVFKKKTDLDGNVHIYKARLVAKGFRQIQSVDYDGTFSSVGMLKSIRIILAIPAYF 579
Query: 42 DYEIW 28
DYEIW
Sbjct: 580 DYEIW 584
Score = 92.4 bits (228), Expect(3) = 8e-72
Identities = 61/150 (40%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Frame = -1
Query: 649 KLGPKSDKCYFVGYPKETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV* 470
KL PKSDK +FVGYPKET+GYY Y +K+FV VFLEK+FIS + SG V L+E+
Sbjct: 349 KLTPKSDKYFFVGYPKETKGYYFYNREEDKVFVARHDVFLEKEFISTKDSGIMVRLEEI- 407
Query: 469 DQ*ESREPKEVHKEYEDSQTIVEFHVPNVIKEP-------HRPSRT*LDPKRFEFLMTRD 311
Q + + +D Q +V+ V V+ EP R R P R+ L T
Sbjct: 408 -QETPKNASTSTQPQQDEQDVVQ-QVEQVVVEPVVEAPASRRSERIWRTPARYALLTTGQ 465
Query: 310 SDELGI-ADEPISYLEATKEPESEKWFEAI 224
D L + D+P +Y EA P+S+KW A+
Sbjct: 466 RDILLLDNDKPTTYEEAMVGPDSKKWLGAM 495
Score = 127 bits (318), Expect = 3e-27
Identities = 56/87 (64%), Positives = 69/87 (79%)
Frame = -3
Query: 1424 TSIYNINTKRLKLDNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLG 1245
TS+YNIN KR + ++ N T++WH LGHINEK + +LH+DG L FDFES ETCE+CLLG
Sbjct: 168 TSVYNINAKRQRPNDLNPTFIWHCHLGHINEKRMEKLHRDGLLHSFDFESFETCESCLLG 227
Query: 1244 KMTKIPFTGHSERASDFLGLIHIDICG 1164
KMTK PFTG SERAS+ LGL++ D CG
Sbjct: 228 KMTKAPFTGQSERASELLGLVYTDECG 254
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 146 bits (369), Expect(3) = 4e-69
Identities = 74/124 (59%), Positives = 86/124 (69%)
Frame = -2
Query: 1047 QDFHE*SREATCNSIKSVHSDRGGEYLSQEFDDLLRDHGIVS*WTPPGTPQHNGVSERRN 868
Q+F + +IK + SDRGGEYLS E+ + L++ GIV TPPGTPQ N VSERRN
Sbjct: 510 QEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVPQLTPPGTPQWNAVSERRN 569
Query: 867 HTLLDMV*SMMSSVKLPILIWGYALETATFTLNRVPFKLIQKTTYEIWNENRPNLSMLKI 688
LLDMV SMMS +P+ WGYALETA FTLNRVP K + KT YEIW RP+LS LKI
Sbjct: 570 RILLDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKRPSLSFLKI 629
Query: 687 WGCE 676
W CE
Sbjct: 630 WCCE 633
Score = 100 bits (248), Expect(3) = 4e-69
Identities = 47/65 (72%), Positives = 55/65 (84%)
Frame = -2
Query: 222 IGCKWVFKKKTDMNGKVQTDNAR*VAKGFKKVQDVDYDETFSPVAIVKSIRIVLAIVAYQ 43
I CKW+FKK TD++G V NAR VAKGF+++Q VDYDETFSPVA++KSIRIVLAI AY
Sbjct: 788 IECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYF 847
Query: 42 DYEIW 28
DYEIW
Sbjct: 848 DYEIW 852
Score = 66.6 bits (161), Expect(3) = 4e-69
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
Frame = -1
Query: 604 KETRGYYLYTPINNKMFVVMIVVFLEKQFISLEISGRNVDLKEV*DQ*ESREPK-EVHKE 428
+ET+GYY Y K+FV VFLEK+FIS + SG V LKE+ + E+ + E
Sbjct: 633 EETKGYYFYNREEGKVFVARHGVFLEKEFISRKDSGSMVRLKEIQETPENASTSTQPQVE 692
Query: 427 YEDSQTIVEFHVPNVIKEP--HRPSRT*LDPKRFEFLMTRDSDELGI-ADEPISYLEATK 257
+ Q + + V V++ P R R P R+ L + D L + DEP +Y EA
Sbjct: 693 QDVVQQVEQVVVEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDNDEPTTYEEAMV 752
Query: 256 EPESEKWFEAI 224
P++EKW A+
Sbjct: 753 GPDTEKWLGAM 763
Score = 221 bits (562), Expect = 9e-59
Identities = 103/184 (55%), Positives = 133/184 (72%), Gaps = 1/184 (0%)
Frame = -3
Query: 1562 NIIYVSCMDTNGFGFYINNGMISISKDEIFCENAPMSYGMYLLELE-TSIYNINTKRLKL 1386
N+I SC+ G+GF + S+ ++IF +APM G+Y++ L+ S+YNIN KR +
Sbjct: 337 NVISTSCLQAEGYGFRSVDNGCSVYYNDIFYFHAPMMNGLYIVNLDGCSVYNINAKRQRP 396
Query: 1385 DNSNKTYLWHYFLGHINEKHISRLHKDGYLDYFDFESLETCEACLLGKMTKIPFTGHSER 1206
+N N T++WH LGHINEK I +LH+DG L FDFES +TCE+CLLGKMTK PFTG SER
Sbjct: 397 NNLNPTFIWHCCLGHINEKRIEKLHRDGLLHSFDFESFKTCESCLLGKMTKAPFTGQSER 456
Query: 1205 ASDFLGLIHIDICGPFKSKARGGYQNFITFTDDLSRYDYVYHMKHKSETLEMFKTFMNEV 1026
AS+ LGL+H D+CGP S ARGG+ FITFTD+ SRY YVY M+HKSE+ E F+ F NEV
Sbjct: 457 ASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFSRYGYVYLMRHKSESFEKFQEFQNEV 516
Query: 1025 EKQL 1014
+ L
Sbjct: 517 QNHL 520