BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00014110
         (716 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMZ59861.1 Mediator of RNA polymerase II transcription subunit 8...    64   5e-08
ONK70596.1 uncharacterized protein A4U43_C05F35400 [Asparagus of...    60   8e-07
OAY77052.1 Mediator of RNA polymerase II transcription subunit 8...    57   6e-06
XP_020109633.1 mediator of RNA polymerase II transcription subun...    57   8e-06

>KMZ59861.1 Mediator of RNA polymerase II transcription subunit 8 [Zostera
           marina]
          Length = 530

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
 Frame = -1

Query: 686 STLQRMQQLGM--GGAQRNYPSQMMTDPMYNIGASNTSNMVAMPHXXXXXXXXXXXXVPG 513
           ST+ RMQQ G+  G +QRNY SQM+ D M+NIGASN+SNMVA+                G
Sbjct: 440 STIPRMQQYGLTSGHSQRNYASQMLNDQMFNIGASNSSNMVALQQ-----QQLGGQIASG 494

Query: 512 NMP-NTQNLQVQGGMVGIQNT 453
           NM  N QNLQ   GM  +QNT
Sbjct: 495 NMQGNNQNLQAV-GMPSLQNT 514


>ONK70596.1 uncharacterized protein A4U43_C05F35400 [Asparagus officinalis]
          Length = 733

 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
 Frame = -1

Query: 716 MSNM-AGIQSQSTLQRMQQLGMGGA--QRNYPSQMMTDPMYNIGASNTSNMVAMPHXXXX 546
           ++NM A +QSQS L RMQ  G+ G   QRN+PSQM+ D M+ +GASN ++MVAM      
Sbjct: 450 ITNMSATMQSQSLLPRMQTFGLSGGHPQRNHPSQMLNDQMFGMGASNPASMVAMQQQQGG 509

Query: 545 XXXXXXXXVPGNMPNTQNLQ 486
                     GNM N Q+LQ
Sbjct: 510 F---------GNMTNAQSLQ 520


>OAY77052.1 Mediator of RNA polymerase II transcription subunit 8 [Ananas
           comosus]
          Length = 328

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
 Frame = -1

Query: 716 MSNMA-GIQSQSTLQRMQQLGMGGA--QRNYPSQMMTDPMYNIGASNTSNMVAMPHXXXX 546
           +SN++  +QSQS L RMQQ G+ G   QRN+ SQM+ D M+ +GASN S+MV M      
Sbjct: 232 ISNISTAMQSQSFLPRMQQFGLNGGHPQRNHASQMLNDQMFGMGASNPSSMVGMQQQQQS 291

Query: 545 XXXXXXXXVPGNM-PNTQNLQVQGGMVGIQN 456
                     GNM  N QNL  Q GMV + N
Sbjct: 292 VF--------GNMQTNVQNL--QPGMVTLPN 312


>XP_020109633.1 mediator of RNA polymerase II transcription subunit 8 isoform X2
           [Ananas comosus]
          Length = 559

 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
 Frame = -1

Query: 716 MSNMA-GIQSQSTLQRMQQLGMGGA--QRNYPSQMMTDPMYNIGASNTSNMVAMPHXXXX 546
           +SN++  +QSQS L RMQQ G+ G   QRN+ SQM+ D M+ +GASN S+MV M      
Sbjct: 463 ISNISTAMQSQSFLPRMQQFGLNGGHPQRNHASQMLNDQMFGMGASNPSSMVGMQQQQQS 522

Query: 545 XXXXXXXXVPGNM-PNTQNLQVQGGMVGIQN 456
                     GNM  N QNL  Q GMV + N
Sbjct: 523 VF--------GNMQTNVQNL--QPGMVTLPN 543