BLASTX nr result
ID: Alisma22_contig00013890
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00013890
(208 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 62 1e-09
XP_018810017.1 PREDICTED: uncharacterized protein LOC108982976 [... 60 6e-09
KYP42260.1 Retrovirus-related Pol polyprotein from transposon TN... 59 2e-08
EEC76476.1 hypothetical protein OsI_14211 [Oryza sativa Indica G... 57 2e-08
CAN77680.1 hypothetical protein VITISV_040762 [Vitis vinifera] 58 3e-08
BAM44532.1 polyprotein [Arabidopsis thaliana] 58 4e-08
JAU62406.1 Retrovirus-related Pol polyprotein from transposon TN... 57 5e-08
JAT44458.1 Retrovirus-related Pol polyprotein from transposon TN... 56 5e-08
EEE57553.1 hypothetical protein OsJ_07890 [Oryza sativa Japonica... 57 7e-08
EEC80484.1 hypothetical protein OsI_22718 [Oryza sativa Indica G... 57 7e-08
BAG98101.1 unnamed protein product [Oryza sativa Japonica Group]... 57 7e-08
JAU58823.1 Retrovirus-related Pol polyprotein from transposon TN... 57 7e-08
ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass... 57 8e-08
AAR88589.1 putative copia-like retrotransposon protein [Oryza sa... 57 8e-08
JAV00236.1 Retrovirus-related Pol polyprotein from transposon TN... 57 8e-08
ACY72569.1 unknown [Oryza sativa Japonica Group] 57 8e-08
JAU92176.1 Retrovirus-related Pol polyprotein from transposon TN... 57 1e-07
AAN04167.1 Putative copia-like retrotransposon polyprotein [Oryz... 57 1e-07
AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU4406... 57 1e-07
CAB46043.1 retrotransposon like protein [Arabidopsis thaliana] C... 57 1e-07
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch AAA57005.1
copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1439
Score = 62.4 bits (150), Expect = 1e-09
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = +1
Query: 7 RASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRS 186
R L WH RLGHP V +V+S+N LP ++ + T+ C +C+ KA +LP ++ S+S
Sbjct: 452 RVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQAKAHQLPYTISMSQS 511
Query: 187 SSPLDLL 207
S+PL L+
Sbjct: 512 SAPLMLI 518
>XP_018810017.1 PREDICTED: uncharacterized protein LOC108982976 [Juglans regia]
Length = 479
Score = 60.1 bits (144), Expect = 6e-09
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +1
Query: 7 RASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRS 186
RA L WH+RLGHP ++ VR ++S LP+ TS + CA+C GK+ +LP + + S
Sbjct: 410 RAPLTTWHSRLGHPSMKIVRNIISRFSLPI-TSNKIDSVCAACQQGKSHQLPFVPSETVS 468
Query: 187 SSPLDLL 207
PLDL+
Sbjct: 469 KGPLDLI 475
>KYP42260.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 623
Score = 58.9 bits (141), Expect = 2e-08
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 13 SLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRSSS 192
+L LWHNRLGHPC ++ V+ K+PV+ C +C +GK+ RLP + + S+
Sbjct: 101 TLSLWHNRLGHPCFSVLQNVLKFCKIPVSNKNEVQF-CVACCMGKSHRLPSSSSTTVYST 159
Query: 193 PLDLL 207
PL+LL
Sbjct: 160 PLELL 164
>EEC76476.1 hypothetical protein OsI_14211 [Oryza sativa Indica Group]
Length = 178
Score = 57.0 bits (136), Expect = 2e-08
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 13 SLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRSSS 192
S WH+RLGHP + V +V+S N LP +T + C +C GK+ +LP ++S SS
Sbjct: 92 SFSRWHSRLGHPAVPIVTRVLSKNNLPCSTIANKDSICDACQKGKSHQLPYPKSSSVSSQ 151
Query: 193 PLDLL 207
PL+L+
Sbjct: 152 PLELI 156
>CAN77680.1 hypothetical protein VITISV_040762 [Vitis vinifera]
Length = 590
Score = 58.2 bits (139), Expect = 3e-08
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = +1
Query: 4 QRASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASR 183
+R S+ WH RLGHP + V +++SS LP T+ + + C SC + KA +LP
Sbjct: 424 ERTSVTGWHQRLGHPSFKVVTRLISSFSLPTTSCLSGSNNCHSCSINKAHQLPFHKHGLT 483
Query: 184 SSSPLDLL 207
S++P DLL
Sbjct: 484 STTPFDLL 491
>BAM44532.1 polyprotein [Arabidopsis thaliana]
Length = 1421
Score = 57.8 bits (138), Expect = 4e-08
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +1
Query: 1 CQRASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTAS 180
C +A+ LWH+RLGHP L + V+S++ LPV C+ C + K+ ++P +
Sbjct: 457 CSKATHCLWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTI 516
Query: 181 RSSSPLDLL 207
SS PL+ +
Sbjct: 517 TSSKPLEYI 525
>JAU62406.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 322
Score = 57.4 bits (137), Expect = 5e-08
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +1
Query: 4 QRASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASR 183
Q+ S WHNRLGHP L ++ ++S+ LP S T+ C+ C + K+ +LP T+
Sbjct: 179 QKLSSTDWHNRLGHPSLTILQNIISTFSLPCKQSVTQTSLCSDCAINKSHKLPFSQTSIV 238
Query: 184 SSSPLDLL 207
SS PL+ +
Sbjct: 239 SSRPLEYI 246
>JAT44458.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 184
Score = 56.2 bits (134), Expect = 5e-08
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +1
Query: 4 QRASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASR 183
+R WH R+GHP R V+ ++S LP + S +++ C++C+ K+ +LP L+ S
Sbjct: 13 ERIPTSSWHARMGHPAFRTVQSIISKYGLPSSPSSSSSV-CSACMKAKSHKLPFTLSPSV 71
Query: 184 SSSPLDLL 207
+S+PLDL+
Sbjct: 72 ASAPLDLV 79
>EEE57553.1 hypothetical protein OsJ_07890 [Oryza sativa Japonica Group]
Length = 499
Score = 57.0 bits (136), Expect = 7e-08
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +1
Query: 25 WHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRSSSPLDL 204
WH RLGHP V+QV+S N LP + + C +C GK+ +LP + SRSS+PL+L
Sbjct: 327 WHCRLGHPSSVIVQQVLSHNNLPCVSESNKHSVCDACQKGKSHQLPYSKSLSRSSAPLEL 386
Query: 205 L 207
+
Sbjct: 387 I 387
>EEC80484.1 hypothetical protein OsI_22718 [Oryza sativa Indica Group]
Length = 506
Score = 57.0 bits (136), Expect = 7e-08
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 13 SLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRSSS 192
S WH+RLGHP + V +V+S N LP +T + C +C GK+ +LP ++S SS
Sbjct: 438 SFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQLPYPKSSSVSSQ 497
Query: 193 PLDLL 207
PL+L+
Sbjct: 498 PLELI 502
>BAG98101.1 unnamed protein product [Oryza sativa Japonica Group] BAS80237.1
Os02g0671800 [Oryza sativa Japonica Group]
Length = 572
Score = 57.0 bits (136), Expect = 7e-08
Identities = 27/61 (44%), Positives = 38/61 (62%)
Frame = +1
Query: 25 WHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRSSSPLDL 204
WH RLGHP V+QV+S N LP + + C +C GK+ +LP + SRSS+PL+L
Sbjct: 400 WHCRLGHPSSVIVQQVLSHNNLPCVSESNKHSVCDACQKGKSHQLPYSKSLSRSSAPLEL 459
Query: 205 L 207
+
Sbjct: 460 I 460
>JAU58823.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 823
Score = 57.0 bits (136), Expect = 7e-08
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 7 RASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRS 186
+ SLP WH+RLGHP ++ +VS LP + S PC+ C++ K+ +LP + S
Sbjct: 467 KTSLPSWHSRLGHPSPPILQTIVSQFSLPCSDSSQKQFPCSHCLINKSHKLPFYSNSITS 526
Query: 187 SSPLDLL 207
+ PL ++
Sbjct: 527 TKPLQVM 533
>ABF95616.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1241
Score = 57.0 bits (136), Expect = 8e-08
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 13 SLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRSSS 192
S WH+RLGHP + V +V+S N LP +T + C +C GK+ +LP ++S SS
Sbjct: 438 SFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQLPYPKSSSVSSQ 497
Query: 193 PLDLL 207
PL+L+
Sbjct: 498 PLELI 502
>AAR88589.1 putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 57.0 bits (136), Expect = 8e-08
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +1
Query: 13 SLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRSSS 192
S WH+RLGHP + V +V+S N LP +T + C +C GK+ +LP ++S SS
Sbjct: 416 SFSRWHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQLPYPKSSSVSSQ 475
Query: 193 PLDLL 207
PL+L+
Sbjct: 476 PLELI 480
>JAV00236.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 1418
Score = 57.0 bits (136), Expect = 8e-08
Identities = 23/67 (34%), Positives = 40/67 (59%)
Frame = +1
Query: 7 RASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRS 186
+ S+ WH+RLGHP ++ ++SS KLP++++ PC +C + K +LP + S
Sbjct: 486 KTSMSDWHSRLGHPAFTVLKNIISSFKLPLSSNVLLDKPCNACSINKMHKLPFSTSTIFS 545
Query: 187 SSPLDLL 207
PLD++
Sbjct: 546 KHPLDIV 552
>ACY72569.1 unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 57.0 bits (136), Expect = 8e-08
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +1
Query: 7 RASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRS 186
+ SL WH+RLGHP L V+QV+S N LP + + C +C K+ +LP + S S
Sbjct: 452 KLSLSRWHSRLGHPSLPIVKQVISKNNLPCSVESVNQSVCNACQEAKSRQLPYVRSTSVS 511
Query: 187 SSPLDLL 207
PL+L+
Sbjct: 512 QFPLELV 518
>JAU92176.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 706
Score = 56.6 bits (135), Expect = 1e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +1
Query: 4 QRASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASR 183
Q+ S WH+RLGHP ++ ++S LP T+S ++ C+ C L KA +LP T+
Sbjct: 351 QQLSAIDWHHRLGHPAFPIIKNIISRFSLPCTSSVTHSSLCSDCALNKAHKLPFSKTSII 410
Query: 184 SSSPLDLL 207
SS PL+ +
Sbjct: 411 SSRPLEYI 418
>AAN04167.1 Putative copia-like retrotransposon polyprotein [Oryza sativa
Japonica Group] AAP53032.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1042
Score = 56.6 bits (135), Expect = 1e-07
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = +1
Query: 13 SLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRSSS 192
SL WH+RLGHP + V +V+SSNKLP + C +C K+ +LP + S S+
Sbjct: 347 SLERWHSRLGHPSIPIVMKVISSNKLPCLRESNKESVCDACQKAKSHQLPYSNSMSVSNK 406
Query: 193 PLDLL 207
PL+L+
Sbjct: 407 PLELI 411
>AAU43956.1 unknown protein [Oryza sativa Japonica Group] AAU44069.1 putative
polyprotein [Oryza sativa Japonica Group]
Length = 1447
Score = 56.6 bits (135), Expect = 1e-07
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 7 RASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRS 186
+ S WH+RLGHP V +V+S N LP + C +C GK+ +LP ++S S
Sbjct: 452 KPSFERWHSRLGHPASPIVEKVISKNNLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMS 511
Query: 187 SSPLDLL 207
S PL+L+
Sbjct: 512 SHPLELI 518
>CAB46043.1 retrotransposon like protein [Arabidopsis thaliana] CAB80958.1
retrotransposon like protein [Arabidopsis thaliana]
Length = 1474
Score = 56.6 bits (135), Expect = 1e-07
Identities = 22/67 (32%), Positives = 41/67 (61%)
Frame = +1
Query: 7 RASLPLWHNRLGHPCLRAVRQVVSSNKLPVTTSGAATAPCASCILGKAARLPLQLTASRS 186
+ +L WH+RLGHP + ++S LPV+ S + C+ C + K+ +LP +++ +S
Sbjct: 462 KTTLSSWHSRLGHPSSSILNTLISKFSLPVSVSASNKLACSDCFINKSHKLPFSISSIKS 521
Query: 187 SSPLDLL 207
+SPL+ +
Sbjct: 522 TSPLEYI 528