BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00013861
         (1465 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AQK43188.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       100   1e-38
AQK86945.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   2e-38
ONM52836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   2e-38
ONM29620.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   2e-38
AQK46390.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   2e-38
AQK92248.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   3e-38
AQK92237.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   3e-38
AQK92238.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ...    99   3e-38
AQK92235.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ...    99   3e-38
ONM38170.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   4e-38
AQK84025.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   4e-38
AQK65817.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   4e-38
ONM11626.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       100   4e-38
ONM06616.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        98   5e-38
ONL92524.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        99   8e-38
AQK78701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        97   8e-38
AQK72949.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]       100   8e-38
ONM32720.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        95   4e-37
AQK98364.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        98   9e-37
ONM55518.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]        98   9e-37

>AQK43188.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  100 bits (248), Expect(2) = 1e-38
 Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+GN+ GPDG    V  C+ +     +  +++++   +      DEW+  T+
Sbjct: 534  VKEALKRMKVGNAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWQRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR LT ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 90.1 bits (222), Expect(2) = 1e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868


>AQK86945.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 99.4 bits (246), Expect(2) = 2e-38
 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR LT ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 90.5 bits (223), Expect(2) = 2e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  DVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868


>ONM52836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 99.4 bits (246), Expect(2) = 2e-38
 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR LT ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 90.1 bits (222), Expect(2) = 2e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868


>ONM29620.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 934

 Score = 99.4 bits (246), Expect(2) = 2e-38
 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 452  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 508

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR LT ++Q  F F   
Sbjct: 509  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 561

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 562  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 621

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 622  KDMYTNVV 629



 Score = 90.1 bits (222), Expect(2) = 2e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 633  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 692

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 693  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 743

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 744  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 786


>AQK46390.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 557

 Score = 99.4 bits (246), Expect(2) = 2e-38
 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 75   VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 131

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR LT ++Q  F F   
Sbjct: 132  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 184

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 185  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 244

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 245  KDMYTNVV 252



 Score = 90.1 bits (222), Expect(2) = 2e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
           RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 256 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 315

Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 316 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 366

Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
            D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 367 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 409


>AQK92248.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 844

 Score = 99.0 bits (245), Expect(2) = 3e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 362  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 418

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 419  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 471

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 472  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 531

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 532  KDMYSNVV 539



 Score = 90.1 bits (222), Expect(2) = 3e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 543  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 602

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 603  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 653

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 654  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 696


>AQK92237.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 712

 Score = 99.0 bits (245), Expect(2) = 3e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 230  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 286

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 287  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 339

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 340  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 399

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 400  KDMYSNVV 407



 Score = 90.1 bits (222), Expect(2) = 3e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
           RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 411 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 470

Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 471 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 521

Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
            D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 522 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 564


>AQK92238.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92243.1
            Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
            AQK92246.1 Retrovirus-related Pol polyprotein LINE-1 [Zea
            mays] AQK92251.1 Retrovirus-related Pol polyprotein
            LINE-1 [Zea mays] AQK92259.1 Retrovirus-related Pol
            polyprotein LINE-1 [Zea mays] AQK92260.1
            Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
            AQK92261.1 Retrovirus-related Pol polyprotein LINE-1 [Zea
            mays]
          Length = 591

 Score = 99.0 bits (245), Expect(2) = 3e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 109  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 165

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 166  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 218

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 219  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 278

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 279  KDMYSNVV 286



 Score = 90.1 bits (222), Expect(2) = 3e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
           RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 290 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 349

Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 350 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 400

Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
            D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 401 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 443


>AQK92235.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92242.1
            Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
            AQK92249.1 Retrovirus-related Pol polyprotein LINE-1 [Zea
            mays] AQK92250.1 Retrovirus-related Pol polyprotein
            LINE-1 [Zea mays] AQK92262.1 Retrovirus-related Pol
            polyprotein LINE-1 [Zea mays]
          Length = 576

 Score = 99.0 bits (245), Expect(2) = 3e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 94   VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 150

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 151  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 203

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 204  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 263

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 264  KDMYSNVV 271



 Score = 90.1 bits (222), Expect(2) = 3e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
           RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 275 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 334

Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 335 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 385

Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
            D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 386 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 428


>ONM38170.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1038

 Score = 98.6 bits (244), Expect(2) = 4e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 556  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 612

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 613  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 665

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 666  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 725

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 726  KDMYTNVV 733



 Score = 90.1 bits (222), Expect(2) = 4e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 737  RTSDGDTDDFPINIGLHQGSALSPYLFTLVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 796

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 797  GVSQKLELWRKTLEAKGFRLSRSKTEYM-------KCDFSATGYEDGDVSLDGQV--VPK 847

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 848  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 890


>AQK84025.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 98.6 bits (244), Expect(2) = 4e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 90.1 bits (222), Expect(2) = 4e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSATGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868


>AQK65817.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 98.6 bits (244), Expect(2) = 4e-38
 Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 8/181 (4%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK-IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQRSTTNAI 1078
            VPI+KN    ++    + IK+               LR LT ++Q  F F   RST  AI
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMTLWERVIEHRLRKLTSVTQNQFGFMPGRSTMEAI 650

Query: 1077 FLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLIKGMYDNQ 904
            FL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LIK MY N 
Sbjct: 651  FLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNV 710

Query: 903  V 901
            V
Sbjct: 711  V 711



 Score = 90.1 bits (222), Expect(2) = 4e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868


>ONM11626.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 822

 Score =  100 bits (248), Expect(2) = 4e-38
 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 340  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIEIVWLTKLFNTI---FRTNRMPDEWRRSTL 396

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR LT ++Q  F F   
Sbjct: 397  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 449

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 450  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 509

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 510  KDMYTNVV 517



 Score = 88.6 bits (218), Expect(2) = 4e-38
 Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
           RT    ++ FPI+ G+HQG ALSPY+F L + E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 521 RTSDGDTDDFPINIGLHQGSALSPYLFALAIDEVTRDIQGDIPWCMLFADDVVLIEESRS 580

Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 581 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 631

Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
            D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 632 KDTFRYLGSMLQKDGDIDEDVSHRIKAEWLKWRQAAGVLCDPR 674


>ONM06616.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 98.2 bits (243), Expect(2) = 5e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKRMKVGKAMGPDGIPIEVWRCLRDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTCVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 90.1 bits (222), Expect(2) = 5e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868


>ONL92524.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 98.6 bits (244), Expect(2) = 8e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 89.0 bits (219), Expect(2) = 8e-38
 Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSATGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++  DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDKDVSHRIKAGWLKWRQAAGVLCDPR 868


>AQK78701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 97.4 bits (241), Expect(2) = 8e-38
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTCVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 90.1 bits (222), Expect(2) = 8e-38
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIDESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868


>AQK72949.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1014

 Score = 99.8 bits (247), Expect(2) = 8e-38
 Identities = 69/181 (38%), Positives = 101/181 (55%), Gaps = 8/181 (4%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDGVI*----CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG+      C+ +     +  +++++   +      DEWR  T+
Sbjct: 532  VKEALKRMKVGKAMGPDGIPIEEWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 588

Query: 1251 VPIYKNNR-IFKAAQIIKIKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQRSTTNAI 1078
            VPI+KN   +       +IK+               LR +T ++Q  F F   RST  AI
Sbjct: 589  VPIFKNKGDVQSCTNYRRIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 648

Query: 1077 FLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLIKGMYDNQ 904
            FL+ +LM+R RE K DL++V+IDL KAYD VPK V+W  LE   V  +Y++LIK MY N 
Sbjct: 649  FLLRQLMERFREQKKDLHMVFIDLEKAYDKVPKSVMWWALEKHKVSTKYINLIKDMYTNV 708

Query: 903  V 901
            V
Sbjct: 709  V 709



 Score = 87.8 bits (216), Expect(2) = 8e-38
 Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT     + FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 713  RTSDGDIDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 772

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  F L      Y         CD+             GQV  VPK
Sbjct: 773  GVSQKLELWRQTLEAKGFTLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 823

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q + ++ +DV++     WLK R    V+YD +
Sbjct: 824  KDIFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLYDPR 866


>ONM32720.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 95.1 bits (235), Expect(2) = 4e-37
 Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL+ MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKMMKVGRAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR LT ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AI L+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAISLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 90.1 bits (222), Expect(2) = 4e-37
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561
                 +EL +  L +  FRL      Y         CD+             GQV  VPK
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825

Query: 560  CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
             D  RYL  ++Q D ++ +DV++     WLK R    V+ D +
Sbjct: 826  KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868


>AQK98364.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score = 98.2 bits (243), Expect(2) = 9e-37
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 534  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRANRMPDEWRRSTL 590

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 591  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 643

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 644  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 704  KDMYTNVV 711



 Score = 85.9 bits (211), Expect(2) = 9e-37
 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
 Frame = -3

Query: 884  RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
            RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q   P  MLFADD+VLI  +  
Sbjct: 715  RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFADDVVLIEESRS 774

Query: 704  KFQ**VELCKNVLASIEFRLLEENRVY------ALQFQSI*NCDWWGQVGCVPKCDKCRY 543
                 +EL +  L +  FRL      Y      A+ ++    C   GQV  VPK D  RY
Sbjct: 775  GVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVC-LDGQV--VPKKDTFRY 831

Query: 542  LSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
            L  ++Q + ++ +DV++     WLK R    V+ D +
Sbjct: 832  LGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHR 868


>ONM55518.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 822

 Score = 98.2 bits (243), Expect(2) = 9e-37
 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%)
 Frame = -2

Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252
            VK AL++MK+G + GPDG    V  C+ +     +  +++++   +      DEWR  T+
Sbjct: 340  VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRANRMPDEWRRSTL 396

Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099
            VPI+KN    ++    +        +K+ E   +H        LR +T ++Q  F F   
Sbjct: 397  VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 449

Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925
            RST  AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W  LE   V  +Y++LI
Sbjct: 450  RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 509

Query: 924  KGMYDNQV 901
            K MY N V
Sbjct: 510  KDMYTNVV 517



 Score = 85.9 bits (211), Expect(2) = 9e-37
 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 7/157 (4%)
 Frame = -3

Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705
           RT    ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q   P  MLFADD+VLI  +  
Sbjct: 521 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFADDVVLIEESRS 580

Query: 704 KFQ**VELCKNVLASIEFRLLEENRVY------ALQFQSI*NCDWWGQVGCVPKCDKCRY 543
                +EL +  L +  FRL      Y      A+ ++    C   GQV  VPK D  RY
Sbjct: 581 GVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVC-LDGQV--VPKKDTFRY 637

Query: 542 LSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435
           L  ++Q + ++ +DV++     WLK R    V+ D +
Sbjct: 638 LGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHR 674