BLASTX nr result
ID: Alisma22_contig00013861
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Alisma22_contig00013861 (1465 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AQK43188.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 100 1e-38 AQK86945.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 2e-38 ONM52836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 2e-38 ONM29620.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 2e-38 AQK46390.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 2e-38 AQK92248.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 3e-38 AQK92237.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 3e-38 AQK92238.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ... 99 3e-38 AQK92235.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] ... 99 3e-38 ONM38170.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 4e-38 AQK84025.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 4e-38 AQK65817.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 4e-38 ONM11626.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 100 4e-38 ONM06616.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 98 5e-38 ONL92524.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 99 8e-38 AQK78701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 97 8e-38 AQK72949.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 100 8e-38 ONM32720.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 95 4e-37 AQK98364.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 98 9e-37 ONM55518.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] 98 9e-37 >AQK43188.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 100 bits (248), Expect(2) = 1e-38 Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+GN+ GPDG V C+ + + +++++ + DEW+ T+ Sbjct: 534 VKEALKRMKVGNAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWQRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR LT ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 90.1 bits (222), Expect(2) = 1e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868 >AQK86945.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 99.4 bits (246), Expect(2) = 2e-38 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR LT ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 90.5 bits (223), Expect(2) = 2e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 DVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868 >ONM52836.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 99.4 bits (246), Expect(2) = 2e-38 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR LT ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 90.1 bits (222), Expect(2) = 2e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868 >ONM29620.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 934 Score = 99.4 bits (246), Expect(2) = 2e-38 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 452 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 508 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR LT ++Q F F Sbjct: 509 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 561 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 562 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 621 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 622 KDMYTNVV 629 Score = 90.1 bits (222), Expect(2) = 2e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 633 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 692 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 693 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 743 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 744 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 786 >AQK46390.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 557 Score = 99.4 bits (246), Expect(2) = 2e-38 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 75 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 131 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR LT ++Q F F Sbjct: 132 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 184 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 185 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 244 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 245 KDMYTNVV 252 Score = 90.1 bits (222), Expect(2) = 2e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 256 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 315 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 316 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 366 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 367 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 409 >AQK92248.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 844 Score = 99.0 bits (245), Expect(2) = 3e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 362 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 418 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 419 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 471 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 472 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 531 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 532 KDMYSNVV 539 Score = 90.1 bits (222), Expect(2) = 3e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 543 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 602 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 603 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 653 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 654 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 696 >AQK92237.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 712 Score = 99.0 bits (245), Expect(2) = 3e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 230 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 286 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 287 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 339 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 340 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 399 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 400 KDMYSNVV 407 Score = 90.1 bits (222), Expect(2) = 3e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 411 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 470 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 471 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 521 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 522 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 564 >AQK92238.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92243.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92246.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92251.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92259.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92260.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92261.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 591 Score = 99.0 bits (245), Expect(2) = 3e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 109 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 165 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 166 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 218 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 219 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 278 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 279 KDMYSNVV 286 Score = 90.1 bits (222), Expect(2) = 3e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 290 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 349 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 350 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 400 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 401 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 443 >AQK92235.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92242.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92249.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92250.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] AQK92262.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 576 Score = 99.0 bits (245), Expect(2) = 3e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 94 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 150 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 151 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 203 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 204 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 263 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 264 KDMYSNVV 271 Score = 90.1 bits (222), Expect(2) = 3e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 275 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 334 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 335 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 385 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 386 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 428 >ONM38170.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1038 Score = 98.6 bits (244), Expect(2) = 4e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 556 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 612 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 613 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 665 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 666 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 725 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 726 KDMYTNVV 733 Score = 90.1 bits (222), Expect(2) = 4e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 737 RTSDGDTDDFPINIGLHQGSALSPYLFTLVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 796 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 797 GVSQKLELWRKTLEAKGFRLSRSKTEYM-------KCDFSATGYEDGDVSLDGQV--VPK 847 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 848 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 890 >AQK84025.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 98.6 bits (244), Expect(2) = 4e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 90.1 bits (222), Expect(2) = 4e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSATGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868 >AQK65817.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 98.6 bits (244), Expect(2) = 4e-38 Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 8/181 (4%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK-IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQRSTTNAI 1078 VPI+KN ++ + IK+ LR LT ++Q F F RST AI Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMTLWERVIEHRLRKLTSVTQNQFGFMPGRSTMEAI 650 Query: 1077 FLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLIKGMYDNQ 904 FL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LIK MY N Sbjct: 651 FLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLIKDMYTNV 710 Query: 903 V 901 V Sbjct: 711 V 711 Score = 90.1 bits (222), Expect(2) = 4e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868 >ONM11626.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 822 Score = 100 bits (248), Expect(2) = 4e-38 Identities = 71/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 340 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIEIVWLTKLFNTI---FRTNRMPDEWRRSTL 396 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR LT ++Q F F Sbjct: 397 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 449 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 450 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 509 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 510 KDMYTNVV 517 Score = 88.6 bits (218), Expect(2) = 4e-38 Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F L + E+T+ +Q D P MLFADD+VLI + Sbjct: 521 RTSDGDTDDFPINIGLHQGSALSPYLFALAIDEVTRDIQGDIPWCMLFADDVVLIEESRS 580 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 581 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 631 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 632 KDTFRYLGSMLQKDGDIDEDVSHRIKAEWLKWRQAAGVLCDPR 674 >ONM06616.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 98.2 bits (243), Expect(2) = 5e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKRMKVGKAMGPDGIPIEVWRCLRDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTCVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 90.1 bits (222), Expect(2) = 5e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868 >ONL92524.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 98.6 bits (244), Expect(2) = 8e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 89.0 bits (219), Expect(2) = 8e-38 Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSATGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDKDVSHRIKAGWLKWRQAAGVLCDPR 868 >AQK78701.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 97.4 bits (241), Expect(2) = 8e-38 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTCVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 90.1 bits (222), Expect(2) = 8e-38 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIDESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868 >AQK72949.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1014 Score = 99.8 bits (247), Expect(2) = 8e-38 Identities = 69/181 (38%), Positives = 101/181 (55%), Gaps = 8/181 (4%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDGVI*----CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG+ C+ + + +++++ + DEWR T+ Sbjct: 532 VKEALKRMKVGKAMGPDGIPIEEWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 588 Query: 1251 VPIYKNNR-IFKAAQIIKIKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQRSTTNAI 1078 VPI+KN + +IK+ LR +T ++Q F F RST AI Sbjct: 589 VPIFKNKGDVQSCTNYRRIKLMSHTMKLWERVIEHRLRKMTSVTQNQFGFMPGRSTMEAI 648 Query: 1077 FLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLIKGMYDNQ 904 FL+ +LM+R RE K DL++V+IDL KAYD VPK V+W LE V +Y++LIK MY N Sbjct: 649 FLLRQLMERFREQKKDLHMVFIDLEKAYDKVPKSVMWWALEKHKVSTKYINLIKDMYTNV 708 Query: 903 V 901 V Sbjct: 709 V 709 Score = 87.8 bits (216), Expect(2) = 8e-38 Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT + FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 713 RTSDGDIDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 772 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + F L Y CD+ GQV VPK Sbjct: 773 GVSQKLELWRQTLEAKGFTLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 823 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q + ++ +DV++ WLK R V+YD + Sbjct: 824 KDIFRYLGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLYDPR 866 >ONM32720.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 95.1 bits (235), Expect(2) = 4e-37 Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL+ MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKMMKVGRAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRTNRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR LT ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKLTSVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AI L+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAISLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 90.1 bits (222), Expect(2) = 4e-37 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q D P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGDIPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVYALQFQSI*NCDWW------------GQVGCVPK 561 +EL + L + FRL Y CD+ GQV VPK Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYM-------KCDFSAMGYEDGDVSLDGQV--VPK 825 Query: 560 CDKCRYLSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 D RYL ++Q D ++ +DV++ WLK R V+ D + Sbjct: 826 KDTFRYLGSMLQKDGDIDEDVSHRIKAGWLKWRQAAGVLCDPR 868 >AQK98364.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 1016 Score = 98.2 bits (243), Expect(2) = 9e-37 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 534 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRANRMPDEWRRSTL 590 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 591 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 643 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 644 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 703 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 704 KDMYTNVV 711 Score = 85.9 bits (211), Expect(2) = 9e-37 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 7/157 (4%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q P MLFADD+VLI + Sbjct: 715 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFADDVVLIEESRS 774 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVY------ALQFQSI*NCDWWGQVGCVPKCDKCRY 543 +EL + L + FRL Y A+ ++ C GQV VPK D RY Sbjct: 775 GVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVC-LDGQV--VPKKDTFRY 831 Query: 542 LSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 L ++Q + ++ +DV++ WLK R V+ D + Sbjct: 832 LGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHR 868 >ONM55518.1 Retrovirus-related Pol polyprotein LINE-1 [Zea mays] Length = 822 Score = 98.2 bits (243), Expect(2) = 9e-37 Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 15/188 (7%) Frame = -2 Query: 1419 VKNALQKMKLGNSCGPDG----VI*CMEENNE*KIYVVYDSLH*DYIDQESLDEWRNITI 1252 VK AL++MK+G + GPDG V C+ + + +++++ + DEWR T+ Sbjct: 340 VKEALKRMKVGKAMGPDGIPIEVWRCLGDIAIVWLTKLFNTI---FRANRMPDEWRRSTL 396 Query: 1251 VPIYKNNRIFKAAQIIK--------IKVDE*DFDHLGENY*ANLRSLTQMSQ-LFLFHVQ 1099 VPI+KN ++ + +K+ E +H LR +T ++Q F F Sbjct: 397 VPIFKNKGDVQSCTNYRGIKLMSHTMKLWERVIEH-------RLRKMTSVTQNQFGFMPG 449 Query: 1098 RSTTNAIFLIGRLMQRHRENKIDLYVVYIDLTKAYD*VPKKVLWRVLE--NVPIQYVDLI 925 RST AIFL+ +LM+R RE K DL++V+IDL KAYD VP+ V+W LE V +Y++LI Sbjct: 450 RSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKVPRSVMWWALEKHKVATKYINLI 509 Query: 924 KGMYDNQV 901 K MY N V Sbjct: 510 KDMYTNVV 517 Score = 85.9 bits (211), Expect(2) = 9e-37 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 7/157 (4%) Frame = -3 Query: 884 RTCQSTSNKFPISTGVHQGLALSPYVFILVMHELTKQVQDDFPLFMLFADDIVLI*YN*K 705 RT ++ FPI+ G+HQG ALSPY+F LV+ E+T+ +Q P MLFADD+VLI + Sbjct: 521 RTSDGDTDDFPINIGLHQGSALSPYLFALVIDEVTRDIQGVLPWCMLFADDVVLIEESRS 580 Query: 704 KFQ**VELCKNVLASIEFRLLEENRVY------ALQFQSI*NCDWWGQVGCVPKCDKCRY 543 +EL + L + FRL Y A+ ++ C GQV VPK D RY Sbjct: 581 GVSQKLELWRQTLEAKGFRLSRSKTEYMKCDFSAMGYEDGDVC-LDGQV--VPKKDTFRY 637 Query: 542 LSCIIQMDSNLQDDVNYMTTT*WLK-RSVTAVVYDQK 435 L ++Q + ++ +DV++ WLK R V+ D + Sbjct: 638 LGSMLQKEGDIDEDVSHRIKAGWLKWRQAAGVLCDHR 674