BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00013856
         (2408 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_020106399.1 CLP protease regulatory subunit CLPX1, mitochondr...   785   0.0  
JAT44775.1 ATP-dependent Clp protease ATP-binding subunit ClpX, ...   776   0.0  
XP_008808963.2 PREDICTED: LOW QUALITY PROTEIN: CLP protease regu...   645   0.0  
XP_015688636.1 PREDICTED: CLP protease regulatory subunit CLPX1,...   640   0.0  
XP_009379893.1 PREDICTED: CLP protease regulatory subunit CLPX1,...   642   0.0  
XP_006836922.1 PREDICTED: ATP-dependent Clp protease ATP-binding...   643   0.0  
AQK53102.1 CLP protease regulatory subunit CLPX3 mitochondrial [...   635   0.0  
XP_015625157.1 PREDICTED: CLP protease regulatory subunit CLPX1,...   639   0.0  
XP_010665487.1 PREDICTED: CLP protease regulatory subunit CLPX3,...   640   0.0  
BAS79289.1 Os02g0564400 [Oryza sativa Japonica Group]                 636   0.0  
AQK53092.1 CLP protease regulatory subunit CLPX3 mitochondrial [...   635   0.0  
XP_011621015.1 PREDICTED: ATP-dependent Clp protease ATP-binding...   638   0.0  
XP_004952735.1 PREDICTED: CLP protease regulatory subunit CLPX1,...   633   0.0  
XP_002452300.1 hypothetical protein SORBIDRAFT_04g023280 [Sorghu...   632   0.0  
EEE57209.1 hypothetical protein OsJ_07170 [Oryza sativa Japonica...   629   0.0  
AQK53104.1 CLP protease regulatory subunit CLPX3 mitochondrial [...   631   0.0  
XP_010252309.1 PREDICTED: CLP protease regulatory subunit CLPX1,...   632   0.0  
KXG30458.1 hypothetical protein SORBI_004G183800 [Sorghum bicolor]    629   0.0  
CBI16961.3 unnamed protein product, partial [Vitis vinifera]          625   0.0  
XP_003575174.1 PREDICTED: CLP protease regulatory subunit CLPX1,...   628   0.0  

>XP_020106399.1 CLP protease regulatory subunit CLPX1, mitochondrial-like [Ananas
            comosus]
          Length = 681

 Score =  785 bits (2027), Expect = 0.0
 Identities = 432/698 (61%), Positives = 491/698 (70%), Gaps = 20/698 (2%)
 Frame = +3

Query: 171  MSRFLRWRKLTSSGVYLTSSSPLAT---------HR---LSRRLSICTGNVCPQIPSPCC 314
            MS  LRW+KL        + S  A          HR   LS+R  ICT  +  ++  PC 
Sbjct: 1    MSGILRWKKLRDPAARAAARSFAAASAASVAGAEHRRYLLSQRSPICT--LRRRLHVPCS 58

Query: 315  S-----HRFQQERHKWEGGSDEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRG 479
            S     HR QQER KWEGGSDEF TRR+RAEVNCPRCSK M+VLFSN  PP + GA DRG
Sbjct: 59   SAAAAGHRHQQERRKWEGGSDEFHTRRLRAEVNCPRCSKHMDVLFSNSPPPSLAGAADRG 118

Query: 480  GYQAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRDRDRAAVXXXXXXXXXXXXXXX 659
            GYQA+++CP+CKTAYYFRPH++ PLQG+FVEIGR +G D ++                  
Sbjct: 119  GYQALNLCPSCKTAYYFRPHRLVPLQGTFVEIGRVRGPDPEKE---------------DD 163

Query: 660  XXXKRSRVSLWDLLRATYAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-R 836
               +    S W+ LR++YAG                                       R
Sbjct: 164  HGGRFRGFSFWEALRSSYAGAGGDPPENWPPMPGSEGSGNGLAVHTPPGPPFPPNLNVVR 223

Query: 837  LTXXXXXXXXXXXXXXXXXXXXFAQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKK 1016
            ++                    F  KEG+GG+NLGKDLPTPKEIC GLDK+VIGQ RAKK
Sbjct: 224  VSGPGGGSGGGGGGAAPGGGSGFGGKEGWGGSNLGKDLPTPKEICTGLDKYVIGQDRAKK 283

Query: 1017 VLSVAVYNHYKRIYHASLXXXXXXXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLA 1196
            VLSVAVYNHYKRIYHASL                    VELEKSNVLLMGPTGSGKTLLA
Sbjct: 284  VLSVAVYNHYKRIYHASLQKRSGADSVNSELEDDDDDNVELEKSNVLLMGPTGSGKTLLA 343

Query: 1197 KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKI 1376
            KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLL VA+++VQAAQQG+VYIDEVDKI
Sbjct: 344  KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAVAEFNVQAAQQGMVYIDEVDKI 403

Query: 1377 TKKAESQNSSRDVSGEGVQQALLKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGG 1556
            TKKAES N SRDVSGEGVQQALLKMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGG
Sbjct: 404  TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGG 463

Query: 1557 AFVDLEKTISERRQDSSIGFGAPVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEF 1736
            AFVDLEKTISERRQDSSIGFGAPVRANMR+G +TN ++TS+LLESVESGDLIAYGLIPEF
Sbjct: 464  AFVDLEKTISERRQDSSIGFGAPVRANMRTGVLTNAVVTSSLLESVESGDLIAYGLIPEF 523

Query: 1737 VGRFPVLVSFSALYEDQLVQVLMEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXX 1916
            VGRFP+LVS +AL E+QLVQVL EPKNAL KQYKK+F+MNNVKLHFTD            
Sbjct: 524  VGRFPILVSLAALSENQLVQVLREPKNALCKQYKKLFSMNNVKLHFTDDALRIIAKKAMA 583

Query: 1917 XNTGARGLRTILENLLMEAMYEIPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDG 2096
             NTGARGLR ILE++L EAMYEIPDVK G E+IDAVVVD E++G  DRPGCGAKILRGDG
Sbjct: 584  KNTGARGLRAILESILTEAMYEIPDVKIGDEKIDAVVVDGEAVGCVDRPGCGAKILRGDG 643

Query: 2097 ALDRYLADIKRQD-MVNVGGCVGDFQEEGR-ASRAISL 2204
            AL+RYL+  K +D    + G  G+ + E   +S+A+S+
Sbjct: 644  ALERYLSKNKTKDPSGTIEGVEGELEGELEVSSQAMSI 681


>JAT44775.1 ATP-dependent Clp protease ATP-binding subunit ClpX, partial
            [Anthurium amnicola]
          Length = 692

 Score =  776 bits (2005), Expect = 0.0
 Identities = 430/690 (62%), Positives = 486/690 (70%), Gaps = 12/690 (1%)
 Frame = +3

Query: 171  MSRFLRWRKLTSSGVYLT-----SSSPLATHRLSRRLSICTGNVCPQIPSPCCS---HRF 326
            MS  LRW+KL  +          S SP A++R ++R  I T      + S CC+   HR 
Sbjct: 13   MSGILRWKKLRETTARAARHATLSPSPGASYRFAQRSPISTRYSRLHV-SACCAGGHHRL 71

Query: 327  QQERHKWEG-GSDEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDR-GGYQAVSM 500
             Q+R KW+G GSDEFQTRRIRAE NCPRCS  MEVLF NR PP I GAGDR GGYQA+++
Sbjct: 72   LQQRRKWDGIGSDEFQTRRIRAEANCPRCSAHMEVLFYNRPPPSIAGAGDRVGGYQALNL 131

Query: 501  CPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRDRDRAAVXXXXXXXXXXXXXXXXXXKRSR 680
            CP C+TA+YFRP++V PLQG+FVEIGR K  D                         R R
Sbjct: 132  CPGCRTAFYFRPNRVVPLQGTFVEIGRLKNWD---LVERGEDDAGGQGGGGGEDFGNRVR 188

Query: 681  VSLWDLLRATYAGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLTXXXXXX 860
             S W+ LR+ Y GE                                     RL+      
Sbjct: 189  ASFWETLRSMYGGEPPENWPPVPGPAPAGPNNGLAVPTPPSPPFPPNLNVVRLSGPGGGG 248

Query: 861  XXXXXXXXXXXXXXFAQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYN 1040
                             K+G+GG+NLGKDLPTPKEIC+GLDKFVIGQ RAKKVLSVAVYN
Sbjct: 249  GSGGVGGADGG------KDGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKVLSVAVYN 302

Query: 1041 HYKRIYHASLXXXXXXXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVN 1220
            HYKRIYHASL                    VELEKSNVLLMGPTGSGKTLLAKTLAR VN
Sbjct: 303  HYKRIYHASLKKGSGADSGNLEAESDDDETVELEKSNVLLMGPTGSGKTLLAKTLARLVN 362

Query: 1221 VPFVIADATTLTQAGYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQN 1400
            VPFVIADATTLTQAGYVGEDVESILYKLLMVAD++VQAAQQGIVYIDEVDKITKKAES N
Sbjct: 363  VPFVIADATTLTQAGYVGEDVESILYKLLMVADFNVQAAQQGIVYIDEVDKITKKAESLN 422

Query: 1401 SSRDVSGEGVQQALLKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKT 1580
             SRDVSGEGVQQALLKMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKT
Sbjct: 423  ISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKT 482

Query: 1581 ISERRQDSSIGFGAPVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLV 1760
            ISERRQDSSIGFGAPVRANMR+G VT+  +TS+LLESVESGDLIAYGLIPEF+GRFP+LV
Sbjct: 483  ISERRQDSSIGFGAPVRANMRTGGVTSAAVTSSLLESVESGDLIAYGLIPEFIGRFPILV 542

Query: 1761 SFSALYEDQLVQVLMEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGL 1940
            S SAL EDQLVQVL EPKNALGKQYKKMF+MNNVKL+FT+T            NTGARGL
Sbjct: 543  SLSALNEDQLVQVLTEPKNALGKQYKKMFSMNNVKLYFTNTALRLISRRAMTKNTGARGL 602

Query: 1941 RTILENLLMEAMYEIPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLAD 2120
            R ILEN+L EAM+EIPD+K G+ER+D VVVD E++GS DRPGCGAKILRG+GAL+ Y++ 
Sbjct: 603  RAILENILTEAMFEIPDLKTGNERVDGVVVDVEAVGSVDRPGCGAKILRGEGALELYVSK 662

Query: 2121 IK-RQDMVNVGGCVGDFQEEGR-ASRAISL 2204
             K + D  N  G   + + +   +SRA+S+
Sbjct: 663  NKHKDDGANADGSEVELEGDSELSSRAMSM 692


>XP_008808963.2 PREDICTED: LOW QUALITY PROTEIN: CLP protease regulatory subunit
            CLPX1, mitochondrial [Phoenix dactylifera]
          Length = 665

 Score =  645 bits (1664), Expect = 0.0
 Identities = 336/436 (77%), Positives = 371/436 (85%), Gaps = 2/436 (0%)
 Frame = +3

Query: 903  FAQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXX 1082
            F  K+G+GG+NLGKDLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRI+HASL    
Sbjct: 230  FGGKDGWGGSNLGKDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIHHASLQKGS 289

Query: 1083 XXXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 1262
                            VEL+KSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA
Sbjct: 290  GADSGNFEPENDDDDNVELDKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 349

Query: 1263 GYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQAL 1442
            GYVGEDVESILYKLL VAD++VQAAQQGIVYIDEVDKITKKAES N SRDVSGEGVQQAL
Sbjct: 350  GYVGEDVESILYKLLTVADFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQAL 409

Query: 1443 LKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 1622
            LKMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA
Sbjct: 410  LKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 469

Query: 1623 PVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVL 1802
            PVRANMR+G +TN ++TS+LLESVES DL+AYGLIPEF+GRFPVLVS SAL EDQLVQVL
Sbjct: 470  PVRANMRTGGLTNAVVTSSLLESVESSDLMAYGLIPEFIGRFPVLVSLSALNEDQLVQVL 529

Query: 1803 MEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYE 1982
            MEPKNALGKQ+KK+F+MNNVKL FTDT            NTGARGLR ILEN+L EAMYE
Sbjct: 530  MEPKNALGKQFKKLFSMNNVKLKFTDTALRLISQKAMAKNTGARGLRAILENILTEAMYE 589

Query: 1983 IPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDM-VNVGGCV 2159
            IPDVK G ERIDAVVVD+E++GS DRPGCGAKIL GDGAL++YL + K +D    + G  
Sbjct: 590  IPDVKTGDERIDAVVVDEEAVGSVDRPGCGAKILCGDGALEKYLKENKIKDREAIIDGSE 649

Query: 2160 GDFQEEGR-ASRAISL 2204
            G+ + E   +SRA+S+
Sbjct: 650  GELEGESELSSRAMSI 665



 Score =  176 bits (446), Expect = 8e-43
 Identities = 93/189 (49%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVCPQIPS-----PCCSHRFQQE 335
           MS   RW++L        ++   A  R      ICT +  P         P   H   QE
Sbjct: 1   MSGIFRWKRLREPAARAAAAVASAPSR-----PICTNSAAPHSGRHHRRPPGIPHG--QE 53

Query: 336 RHKWEGGSDEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRGGYQAVSMCPTCK 515
           RHKW GG+DEF TRRIRAE NCPRCSK M+VLFSNRSPP I GAGDRGGYQA+++CP+CK
Sbjct: 54  RHKWAGGADEFHTRRIRAEANCPRCSKHMDVLFSNRSPPSIAGAGDRGGYQALNVCPSCK 113

Query: 516 TAYYFRPHKVAPLQGSFVEIGRFKGRDRDRAAVXXXXXXXXXXXXXXXXXXKRSRVSLWD 695
           TAYYFRPHK+ PLQG+FVEIGR +G D +R                      R + S W+
Sbjct: 114 TAYYFRPHKLVPLQGTFVEIGRVRGADSER--------ERPAGAGDDEEQGNRLKTSFWE 165

Query: 696 LLRATYAGE 722
            LR++Y GE
Sbjct: 166 ALRSSYGGE 174


>XP_015688636.1 PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial-like
            [Oryza brachyantha]
          Length = 636

 Score =  640 bits (1652), Expect = 0.0
 Identities = 330/433 (76%), Positives = 369/433 (85%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A K+G+GG+NLGKDLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH S+     
Sbjct: 206  AGKDGWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSVQKGSG 265

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 1265
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG
Sbjct: 266  ADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 325

Query: 1266 YVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALL 1445
            YVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALL
Sbjct: 326  YVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 385

Query: 1446 KMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 1625
            KMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP
Sbjct: 386  KMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 445

Query: 1626 VRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLM 1805
            VRANMR+G V++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVLM
Sbjct: 446  VRANMRAGGVSSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLM 505

Query: 1806 EPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEI 1985
            EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILEN+LM+AMYEI
Sbjct: 506  EPKNALGKQFKKLFSMNNVKLHFTDAALRIISKKAMSKNTGARGLRTILENILMDAMYEI 565

Query: 1986 PDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVGD 2165
            PD K+G +RIDAVVVD++++GS D+PGCGAKIL GDGA DRYL+++K     +  G   D
Sbjct: 566  PDAKSGEKRIDAVVVDEDAVGSVDQPGCGAKILYGDGAFDRYLSEMKAAG--DAAGSEVD 623

Query: 2166 FQEEGRASRAISL 2204
             + E  +SRA+ +
Sbjct: 624  REAELSSSRAMGM 636



 Score = 68.2 bits (165), Expect = 4e-08
 Identities = 27/42 (64%), Positives = 36/42 (85%)
 Frame = +3

Query: 462 GAGDRGGYQAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFK 587
           G G  GGYQA+++CP C++AY+FRPH +APLQG+FVEIGR +
Sbjct: 92  GGGAGGGYQALNLCPNCRSAYFFRPHVLAPLQGTFVEIGRVR 133


>XP_009379893.1 PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial [Musa
            acuminata subsp. malaccensis]
          Length = 677

 Score =  642 bits (1656), Expect = 0.0
 Identities = 326/410 (79%), Positives = 357/410 (87%)
 Frame = +3

Query: 912  KEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXXXX 1091
            KEG+GG+NLGKDLPTPKEIC+GLDK+VIGQ RAKKVL+VAVYNHYKRIYHASL       
Sbjct: 247  KEGWGGSNLGKDLPTPKEICKGLDKYVIGQERAKKVLAVAVYNHYKRIYHASLQEGSEAN 306

Query: 1092 XXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 1271
                         VELEKSNVLL+GPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV
Sbjct: 307  LGNSDTEGDNDNNVELEKSNVLLLGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 366

Query: 1272 GEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALLKM 1451
            GEDVESILYKLL VA+++VQAAQQGIVYIDEVDKITKKAES N SRDVSGEGVQQALLKM
Sbjct: 367  GEDVESILYKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNLSRDVSGEGVQQALLKM 426

Query: 1452 LEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR 1631
            LEGTI+NVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR
Sbjct: 427  LEGTIINVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR 486

Query: 1632 ANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLMEP 1811
            ANMRSG +TN ++ S+LLESVES DLIAYGLIPEFVGRFP+LVS SAL EDQLVQVL EP
Sbjct: 487  ANMRSGGLTNAVVASSLLESVESSDLIAYGLIPEFVGRFPILVSLSALSEDQLVQVLTEP 546

Query: 1812 KNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEIPD 1991
            KNALG+QYKK+F+MNNVKLHFTD             NTGARGLR ILEN+L+EAM+EIPD
Sbjct: 547  KNALGRQYKKLFSMNNVKLHFTDAALRLIAKKAMAKNTGARGLRAILENILIEAMFEIPD 606

Query: 1992 VKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMV 2141
            VK G ERIDAVVVD+E++GS D+PGCGAKIL GD ALD YL++ KR D++
Sbjct: 607  VKTGDERIDAVVVDEEAVGSVDKPGCGAKILHGDDALDHYLSENKRSDVI 656



 Score =  142 bits (357), Expect = 2e-31
 Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 20/159 (12%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATH-------RLSRR--LSICTGNV-------CPQIP 302
           MS  LRW+KL  +   +  S+  A+        RLSRR  +S   G+         P  P
Sbjct: 1   MSGVLRWKKLRDTATRVARSAAAASATDRETPCRLSRRRPISAIAGDHHRRLLLHAPASP 60

Query: 303 SPCCSHR----FQQERHKWEGGSDEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAG 470
           +   S R     +QERHKW+GG+DEF TRRIRAE  CPRCS  M++LFSN SP  I G G
Sbjct: 61  ALATSRRSFGLLRQERHKWDGGADEFHTRRIRAEAQCPRCSHYMDILFSNASPFSIAGGG 120

Query: 471 DRGGYQAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFK 587
             GGYQA+++CP+CKTAYYFRP+K+ PL+G+FVE+GR +
Sbjct: 121 G-GGYQALNLCPSCKTAYYFRPNKLVPLRGTFVEVGRVR 158


>XP_006836922.1 PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like,
            mitochondrial isoform X2 [Amborella trichopoda]
            ERM99775.1 hypothetical protein AMTR_s00099p00142540
            [Amborella trichopoda]
          Length = 709

 Score =  643 bits (1659), Expect = 0.0
 Identities = 334/436 (76%), Positives = 371/436 (85%), Gaps = 2/436 (0%)
 Frame = +3

Query: 903  FAQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXX 1082
            F  K+ +GGANLGKDLPTPKEIC+GLDKFVIGQ RAKKVLSVAVYNHYKRIYHASL    
Sbjct: 274  FGSKDAWGGANLGKDLPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHASLQKGI 333

Query: 1083 XXXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 1262
                            VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA
Sbjct: 334  GGDSSCSEAETDDGDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 393

Query: 1263 GYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQAL 1442
            GYVGEDVESILYKLL VA+++V AAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQAL
Sbjct: 394  GYVGEDVESILYKLLTVAEFNVAAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 453

Query: 1443 LKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 1622
            LKMLEGT+VNVPE+GARKHPRGDN+QIDTK+ILFICGGAFVDLEKTISERRQDSSIGFGA
Sbjct: 454  LKMLEGTVVNVPEKGARKHPRGDNIQIDTKEILFICGGAFVDLEKTISERRQDSSIGFGA 513

Query: 1623 PVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVL 1802
            PVRANMR+G +TN ++TS+LLESVESGDL+AYGLIPEF+GRFP+LVS SAL EDQLVQVL
Sbjct: 514  PVRANMRTGGLTNAVVTSSLLESVESGDLMAYGLIPEFIGRFPILVSLSALNEDQLVQVL 573

Query: 1803 MEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYE 1982
             EPKNALGKQYKKMF+MNNVKLHFT+             NTGARGLR ILE++L EAMYE
Sbjct: 574  TEPKNALGKQYKKMFSMNNVKLHFTENALRLIAKKAMSKNTGARGLRAILESILTEAMYE 633

Query: 1983 IPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQD-MVNVGGCV 2159
            IPDVK G++R+DAVVVD+E++G  D PG GAKILRGDGALD YLAD K +D +++V G  
Sbjct: 634  IPDVKTGNDRVDAVVVDEEAVGYGDMPGTGAKILRGDGALDCYLADHKLKDPVLSVDGSE 693

Query: 2160 GDFQEEGR-ASRAISL 2204
            G+ + E   ASRA+S+
Sbjct: 694  GESEVEAELASRAMSM 709



 Score =  106 bits (265), Expect = 4e-20
 Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 9/98 (9%)
 Frame = +3

Query: 330 QERHKWEGGSDE-FQTRRIRAEVNCPRCSKSMEVLFSNRS--------PPCIDGAGDRGG 482
           QER+KWEGG D+    +RIRAEVNCPRCSK M+VL +  S         P I   GD+  
Sbjct: 73  QERNKWEGGRDDGIHPKRIRAEVNCPRCSKQMDVLIAPNSLSVRSLSNRPLI---GDQS- 128

Query: 483 YQAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRD 596
           +QAV++CP CKTAYYFRP ++ PLQGSFVEIGR    D
Sbjct: 129 FQAVNLCPNCKTAYYFRPFRLVPLQGSFVEIGRINSHD 166


>AQK53102.1 CLP protease regulatory subunit CLPX3 mitochondrial [Zea mays]
          Length = 552

 Score =  635 bits (1639), Expect = 0.0
 Identities = 331/436 (75%), Positives = 370/436 (84%), Gaps = 3/436 (0%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A KEG+GG+NLG+DLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH +L     
Sbjct: 122  AGKEGWGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQTLQKGSG 181

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 1265
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG
Sbjct: 182  ADLGGFNGEADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 241

Query: 1266 YVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALL 1445
            YVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALL
Sbjct: 242  YVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 301

Query: 1446 KMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 1625
            KMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP
Sbjct: 302  KMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 361

Query: 1626 VRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLM 1805
            VRANMR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVL+
Sbjct: 362  VRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLI 421

Query: 1806 EPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEI 1985
            EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILEN+LM++MYEI
Sbjct: 422  EPKNALGKQFKKLFSMNNVKLHFTDGALRIIAKKAMSKNTGARGLRTILENILMDSMYEI 481

Query: 1986 PDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVG- 2162
            PD K+G +RIDAVVVD++++GS D+PGCGAKIL GDGALD+YL+ IK       G  VG 
Sbjct: 482  PDAKSGEKRIDAVVVDEDAVGSVDQPGCGAKILYGDGALDQYLSQIKVS-----GDGVGS 536

Query: 2163 --DFQEEGRASRAISL 2204
              D + E  +SRAI +
Sbjct: 537  EMDGEAELSSSRAIGM 552



 Score = 70.5 bits (171), Expect = 7e-09
 Identities = 32/64 (50%), Positives = 44/64 (68%)
 Frame = +3

Query: 420 MEVLFSNRSPPCIDGAGDRGGYQAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRDR 599
           M++LFS+R PP    A    GYQA+++CP C++AY+F PH + PLQG+FVEIGR +    
Sbjct: 1   MDILFSHRGPPA---AAAGAGYQALNLCPNCRSAYFFLPHVLTPLQGTFVEIGRVRADLL 57

Query: 600 DRAA 611
           D  A
Sbjct: 58  DHPA 61


>XP_015625157.1 PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial
            isoform X1 [Oryza sativa Japonica Group] BAH01586.1
            unnamed protein product [Oryza sativa Japonica Group]
            EEC73425.1 hypothetical protein OsI_07697 [Oryza sativa
            Indica Group]
          Length = 645

 Score =  639 bits (1648), Expect = 0.0
 Identities = 328/433 (75%), Positives = 368/433 (84%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A K+G+GG+NLGKDLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH SL     
Sbjct: 215  AGKDGWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSG 274

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 1265
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG
Sbjct: 275  ADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 334

Query: 1266 YVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALL 1445
            YVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALL
Sbjct: 335  YVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 394

Query: 1446 KMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 1625
            KMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAF+DLEKTISERRQDSSIGFGAP
Sbjct: 395  KMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAP 454

Query: 1626 VRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLM 1805
            VRANMR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVLM
Sbjct: 455  VRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLM 514

Query: 1806 EPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEI 1985
            EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILEN+LM+AMYEI
Sbjct: 515  EPKNALGKQFKKLFSMNNVKLHFTDAALRIIAKKAMSKNTGARGLRTILENILMDAMYEI 574

Query: 1986 PDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVGD 2165
            PD K+G +RIDAVVVD++++G+ D+PGCGAKIL GDGA +RYL+ IK     +  G   D
Sbjct: 575  PDAKSGEKRIDAVVVDEDAVGAVDQPGCGAKILYGDGAFERYLSQIKVAG--DAAGSEAD 632

Query: 2166 FQEEGRASRAISL 2204
             + E  +SRA+ +
Sbjct: 633  GEAELSSSRAMGM 645



 Score =  126 bits (316), Expect = 2e-26
 Identities = 70/152 (46%), Positives = 90/152 (59%), Gaps = 13/152 (8%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVC--PQIPSPCCSHRFQQERHK 344
           MS  LRWR+L +                +R  S  T   C  P + +P   HR  QER K
Sbjct: 1   MSGLLRWRRLAAVA--------------TRAASTLTAPECCSPAVVAP--PHRRVQERRK 44

Query: 345 WEG-------GSDEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRG----GYQA 491
           WEG        SDE + RRIRAE +CPRCSK M++LFS+R+PP    A   G    GYQA
Sbjct: 45  WEGPTSSSSSSSDEHEPRRIRAEAHCPRCSKHMDILFSHRAPPSSSAAAGAGAGGGGYQA 104

Query: 492 VSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFK 587
           +++CP C++AY+FRPH +APLQG+FVEIGR +
Sbjct: 105 LNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVR 136


>XP_010665487.1 PREDICTED: CLP protease regulatory subunit CLPX3, mitochondrial
            [Vitis vinifera]
          Length = 686

 Score =  640 bits (1652), Expect = 0.0
 Identities = 332/438 (75%), Positives = 369/438 (84%), Gaps = 4/438 (0%)
 Frame = +3

Query: 903  FAQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXX 1082
            F ++ G+GG+NLGKDLPTPKEIC+GLDKFVIGQ RAKKVLSVAVYNHYKRIYH SL    
Sbjct: 252  FGERNGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHGSLQKGS 311

Query: 1083 XXXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 1262
                            VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA
Sbjct: 312  GAESGTSEVDDDS---VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 368

Query: 1263 GYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQAL 1442
            GYVGEDVESILYKLL VA+++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQAL
Sbjct: 369  GYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEVDKITKKAESLNLSRDVSGEGVQQAL 428

Query: 1443 LKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 1622
            LKMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTIS+RRQDSSIGFGA
Sbjct: 429  LKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISDRRQDSSIGFGA 488

Query: 1623 PVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVL 1802
            PVRANMR+G +TN ++TS+LLESVES DLIAYGLIPEF+GRFP+LVS SAL EDQLV+VL
Sbjct: 489  PVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVKVL 548

Query: 1803 MEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYE 1982
             EPKNALGKQYKK+F+MNNVKLHFT+             NTGARGLR +LE++L EAMYE
Sbjct: 549  TEPKNALGKQYKKLFSMNNVKLHFTEKALRQIAKKAMVKNTGARGLRALLESILTEAMYE 608

Query: 1983 IPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVG 2162
            IPDVK G +R+DAVVVD+ES+GS + PGCG KILRGDGALD YLA+ K +D V  GG  G
Sbjct: 609  IPDVKTGKDRVDAVVVDEESVGSVNAPGCGGKILRGDGALDCYLAETKLKDPVESGGEAG 668

Query: 2163 DFQ----EEGRASRAISL 2204
            D +    E   +SRA+S+
Sbjct: 669  DGELQEAESEVSSRAMSM 686



 Score =  127 bits (320), Expect = 8e-27
 Identities = 72/152 (47%), Positives = 90/152 (59%), Gaps = 21/152 (13%)
 Frame = +3

Query: 330 QERHKWE-GGSDEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPC----------IDGAGDR 476
           QER+KW+ GGSD FQTR+IRAE NCPRCSK M++LFSNR  P            +  G  
Sbjct: 55  QERYKWDHGGSDGFQTRKIRAEANCPRCSKVMDLLFSNRHFPSNFSPAVPTDSSNSKGSG 114

Query: 477 GGYQAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRF----------KGRDRDRAAVXXXX 626
           G YQAV++CP CKTAYYFRP+K+APLQGSFVEIGR           KG+D ++ +     
Sbjct: 115 GSYQAVNLCPNCKTAYYFRPYKIAPLQGSFVEIGRSDYNNTNTNHPKGKDNEKKS----- 169

Query: 627 XXXXXXXXXXXXXXKRSRVSLWDLLRATYAGE 722
                          R R+S W+ LR +Y G+
Sbjct: 170 --SKNGGGHEEDYGSRLRMSFWETLR-SYGGD 198


>BAS79289.1 Os02g0564400 [Oryza sativa Japonica Group]
          Length = 645

 Score =  636 bits (1640), Expect = 0.0
 Identities = 327/433 (75%), Positives = 367/433 (84%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A K+G+GG+NLGKDLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH SL     
Sbjct: 215  AGKDGWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSG 274

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 1265
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 
Sbjct: 275  ADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAR 334

Query: 1266 YVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALL 1445
            YVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALL
Sbjct: 335  YVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 394

Query: 1446 KMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 1625
            KMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAF+DLEKTISERRQDSSIGFGAP
Sbjct: 395  KMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAP 454

Query: 1626 VRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLM 1805
            VRANMR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVLM
Sbjct: 455  VRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLM 514

Query: 1806 EPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEI 1985
            EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILEN+LM+AMYEI
Sbjct: 515  EPKNALGKQFKKLFSMNNVKLHFTDAALRIIAKKAMSKNTGARGLRTILENILMDAMYEI 574

Query: 1986 PDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVGD 2165
            PD K+G +RIDAVVVD++++G+ D+PGCGAKIL GDGA +RYL+ IK     +  G   D
Sbjct: 575  PDAKSGEKRIDAVVVDEDAVGAVDQPGCGAKILYGDGAFERYLSQIKVAG--DAAGSEAD 632

Query: 2166 FQEEGRASRAISL 2204
             + E  +SRA+ +
Sbjct: 633  GEAELSSSRAMGM 645



 Score =  126 bits (316), Expect = 2e-26
 Identities = 70/152 (46%), Positives = 90/152 (59%), Gaps = 13/152 (8%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVC--PQIPSPCCSHRFQQERHK 344
           MS  LRWR+L +                +R  S  T   C  P + +P   HR  QER K
Sbjct: 1   MSGLLRWRRLAAVA--------------TRAASTLTAPECCSPAVVAP--PHRRVQERRK 44

Query: 345 WEG-------GSDEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRG----GYQA 491
           WEG        SDE + RRIRAE +CPRCSK M++LFS+R+PP    A   G    GYQA
Sbjct: 45  WEGPTSSSSSSSDEHEPRRIRAEAHCPRCSKHMDILFSHRAPPSSSAAAGAGAGGGGYQA 104

Query: 492 VSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFK 587
           +++CP C++AY+FRPH +APLQG+FVEIGR +
Sbjct: 105 LNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVR 136


>AQK53092.1 CLP protease regulatory subunit CLPX3 mitochondrial [Zea mays]
          Length = 639

 Score =  635 bits (1639), Expect = 0.0
 Identities = 331/436 (75%), Positives = 370/436 (84%), Gaps = 3/436 (0%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A KEG+GG+NLG+DLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH +L     
Sbjct: 209  AGKEGWGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQTLQKGSG 268

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 1265
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG
Sbjct: 269  ADLGGFNGEADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 328

Query: 1266 YVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALL 1445
            YVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALL
Sbjct: 329  YVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 388

Query: 1446 KMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 1625
            KMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP
Sbjct: 389  KMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 448

Query: 1626 VRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLM 1805
            VRANMR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVL+
Sbjct: 449  VRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLI 508

Query: 1806 EPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEI 1985
            EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILEN+LM++MYEI
Sbjct: 509  EPKNALGKQFKKLFSMNNVKLHFTDGALRIIAKKAMSKNTGARGLRTILENILMDSMYEI 568

Query: 1986 PDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVG- 2162
            PD K+G +RIDAVVVD++++GS D+PGCGAKIL GDGALD+YL+ IK       G  VG 
Sbjct: 569  PDAKSGEKRIDAVVVDEDAVGSVDQPGCGAKILYGDGALDQYLSQIKVS-----GDGVGS 623

Query: 2163 --DFQEEGRASRAISL 2204
              D + E  +SRAI +
Sbjct: 624  EMDGEAELSSSRAIGM 639



 Score =  122 bits (307), Expect = 3e-25
 Identities = 71/157 (45%), Positives = 90/157 (57%), Gaps = 10/157 (6%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVCPQIPSPCCSHRFQQERHKWE 350
           MS  LRWR+L S+     ++S L         +   G V P  P     HR  QER KWE
Sbjct: 1   MSGLLRWRRLVSAAT--RAASTLTAAECCPAAATAAGAVAPSPPP----HRRLQERRKWE 54

Query: 351 ------GGS----DEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRGGYQAVSM 500
                 GGS    DE + RRIRAE +CPRCSK M++LFS+R PP    A    GYQA+++
Sbjct: 55  SSSSGSGGSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPA---AAAGAGYQALNL 111

Query: 501 CPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRDRDRAA 611
           CP C++AY+F PH + PLQG+FVEIGR +    D  A
Sbjct: 112 CPNCRSAYFFLPHVLTPLQGTFVEIGRVRADLLDHPA 148


>XP_011621015.1 PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like,
            mitochondrial isoform X1 [Amborella trichopoda]
          Length = 711

 Score =  638 bits (1646), Expect = 0.0
 Identities = 334/438 (76%), Positives = 371/438 (84%), Gaps = 4/438 (0%)
 Frame = +3

Query: 903  FAQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXX 1082
            F  K+ +GGANLGKDLPTPKEIC+GLDKFVIGQ RAKKVLSVAVYNHYKRIYHASL    
Sbjct: 274  FGSKDAWGGANLGKDLPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHASLQKGI 333

Query: 1083 XXXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 1262
                            VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA
Sbjct: 334  GGDSSCSEAETDDGDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 393

Query: 1263 GYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQAL 1442
            GYVGEDVESILYKLL VA+++V AAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQAL
Sbjct: 394  GYVGEDVESILYKLLTVAEFNVAAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 453

Query: 1443 LKMLEGTI--VNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGF 1616
            LKMLEGT+  VNVPE+GARKHPRGDN+QIDTK+ILFICGGAFVDLEKTISERRQDSSIGF
Sbjct: 454  LKMLEGTVSVVNVPEKGARKHPRGDNIQIDTKEILFICGGAFVDLEKTISERRQDSSIGF 513

Query: 1617 GAPVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQ 1796
            GAPVRANMR+G +TN ++TS+LLESVESGDL+AYGLIPEF+GRFP+LVS SAL EDQLVQ
Sbjct: 514  GAPVRANMRTGGLTNAVVTSSLLESVESGDLMAYGLIPEFIGRFPILVSLSALNEDQLVQ 573

Query: 1797 VLMEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAM 1976
            VL EPKNALGKQYKKMF+MNNVKLHFT+             NTGARGLR ILE++L EAM
Sbjct: 574  VLTEPKNALGKQYKKMFSMNNVKLHFTENALRLIAKKAMSKNTGARGLRAILESILTEAM 633

Query: 1977 YEIPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQD-MVNVGG 2153
            YEIPDVK G++R+DAVVVD+E++G  D PG GAKILRGDGALD YLAD K +D +++V G
Sbjct: 634  YEIPDVKTGNDRVDAVVVDEEAVGYGDMPGTGAKILRGDGALDCYLADHKLKDPVLSVDG 693

Query: 2154 CVGDFQEEGR-ASRAISL 2204
              G+ + E   ASRA+S+
Sbjct: 694  SEGESEVEAELASRAMSM 711



 Score =  106 bits (265), Expect = 4e-20
 Identities = 56/98 (57%), Positives = 67/98 (68%), Gaps = 9/98 (9%)
 Frame = +3

Query: 330 QERHKWEGGSDE-FQTRRIRAEVNCPRCSKSMEVLFSNRS--------PPCIDGAGDRGG 482
           QER+KWEGG D+    +RIRAEVNCPRCSK M+VL +  S         P I   GD+  
Sbjct: 73  QERNKWEGGRDDGIHPKRIRAEVNCPRCSKQMDVLIAPNSLSVRSLSNRPLI---GDQS- 128

Query: 483 YQAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRD 596
           +QAV++CP CKTAYYFRP ++ PLQGSFVEIGR    D
Sbjct: 129 FQAVNLCPNCKTAYYFRPFRLVPLQGSFVEIGRINSHD 166


>XP_004952735.1 PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial-like
            [Setaria italica] KQL30100.1 hypothetical protein
            SETIT_016606mg [Setaria italica]
          Length = 647

 Score =  633 bits (1633), Expect = 0.0
 Identities = 329/433 (75%), Positives = 365/433 (84%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A  EG+GG++LGKDLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH SL     
Sbjct: 217  AGNEGWGGSSLGKDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSG 276

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 1265
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG
Sbjct: 277  ADSGGFDGEADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 336

Query: 1266 YVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALL 1445
            YVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALL
Sbjct: 337  YVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 396

Query: 1446 KMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 1625
            KMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP
Sbjct: 397  KMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 456

Query: 1626 VRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLM 1805
            VRANMR   +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVLM
Sbjct: 457  VRANMRGSGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLM 516

Query: 1806 EPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEI 1985
            EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILEN+LM++MYEI
Sbjct: 517  EPKNALGKQFKKLFSMNNVKLHFTDGALRIIAKKAMSKNTGARGLRTILENILMDSMYEI 576

Query: 1986 PDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVGD 2165
            PD K+G +RIDAVVVD++++GS D+PGCGAKIL GDGALD+YL+ IK     +  G   D
Sbjct: 577  PDAKSGEKRIDAVVVDEDAVGSVDQPGCGAKILYGDGALDQYLSKIKASG--DGAGSEVD 634

Query: 2166 FQEEGRASRAISL 2204
             + E   SRAI +
Sbjct: 635  GEAELSPSRAIGM 647



 Score =  124 bits (310), Expect = 1e-25
 Identities = 70/157 (44%), Positives = 89/157 (56%), Gaps = 10/157 (6%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVCPQIPSPCCSHRFQQERHKWE 350
           MS  LRWR+L  +     S+   A     R  S         +P P   HR  QER KWE
Sbjct: 1   MSGLLRWRRLAGAATRAASTLTAAGAAAGRECSPAAAGAAAPLPPPP-PHRRVQERRKWE 59

Query: 351 ----GGS------DEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRGGYQAVSM 500
               GGS      DE + RRIRAE +CPRCSK M++LF++R  P        GGYQA+++
Sbjct: 60  SSSSGGSSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFAHRGLP----PAAPGGYQALNL 115

Query: 501 CPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRDRDRAA 611
           CP C++AY+FRPH +APLQG+FVEIGR +    D  A
Sbjct: 116 CPNCRSAYFFRPHDLAPLQGTFVEIGRVRADLLDHPA 152


>XP_002452300.1 hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
          Length = 640

 Score =  632 bits (1631), Expect = 0.0
 Identities = 327/433 (75%), Positives = 365/433 (84%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A KEG+GG+NLG+DLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH SL     
Sbjct: 214  AGKEGWGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSG 273

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 1265
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG
Sbjct: 274  ADLGGFDGEADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 333

Query: 1266 YVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALL 1445
            YVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALL
Sbjct: 334  YVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 393

Query: 1446 KMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 1625
            KMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP
Sbjct: 394  KMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 453

Query: 1626 VRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLM 1805
            VRANMR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVL 
Sbjct: 454  VRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLT 513

Query: 1806 EPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEI 1985
            EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILE +LM++MYEI
Sbjct: 514  EPKNALGKQFKKLFSMNNVKLHFTDGALRIIAKKAMSKNTGARGLRTILETILMDSMYEI 573

Query: 1986 PDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVGD 2165
            PD ++G +RIDAVVVD++++GS D+PGCGAKIL GDGALD+YL+ IK      V G    
Sbjct: 574  PDARSGEKRIDAVVVDEDAVGSVDQPGCGAKILYGDGALDQYLSQIK------VSGDGVA 627

Query: 2166 FQEEGRASRAISL 2204
             + +G   RAI +
Sbjct: 628  SEMDGETERAIGM 640



 Score =  126 bits (317), Expect = 1e-26
 Identities = 75/162 (46%), Positives = 92/162 (56%), Gaps = 15/162 (9%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVCPQIPSPCCSHRFQQERHKWE 350
           MS  LRWR+L  +          AT   S   +       P  P P   HR  QER KWE
Sbjct: 1   MSGLLRWRRLAGA----------ATRAASTLTAAECSPAAPLPPPP--PHRRLQERRKWE 48

Query: 351 --------GGS------DEFQTRRIRAEVNCPRCSKSMEVLFSNRSPP-CIDGAGDRGGY 485
                   GGS      DE + RRIRAE +CPRCSK M++LFS+R PP    GAG  GGY
Sbjct: 49  SSSSGSGSGGSSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPPTTAGAGAAGGY 108

Query: 486 QAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRDRDRAA 611
           QA+++CP C++AY+FRPH +APLQG+FVEIGR +    D  A
Sbjct: 109 QALNLCPNCRSAYFFRPHVLAPLQGTFVEIGRVRADLLDHPA 150


>EEE57209.1 hypothetical protein OsJ_07170 [Oryza sativa Japonica Group]
          Length = 583

 Score =  629 bits (1623), Expect = 0.0
 Identities = 328/447 (73%), Positives = 368/447 (82%), Gaps = 14/447 (3%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A K+G+GG+NLGKDLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH SL     
Sbjct: 139  AGKDGWGGSNLGKDLPTPKEICQGLDKYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSG 198

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA- 1262
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 
Sbjct: 199  ADLGGFDGEADDDDGVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAI 258

Query: 1263 -------------GYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNS 1403
                         GYVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N 
Sbjct: 259  PKVKLNSCAFLQAGYVGEDVESILYKLLAVADFNVQAAQQGMVYIDEVDKITKKAESLNI 318

Query: 1404 SRDVSGEGVQQALLKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTI 1583
            SRDVSGEGVQQALLKMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAF+DLEKTI
Sbjct: 319  SRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTI 378

Query: 1584 SERRQDSSIGFGAPVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVS 1763
            SERRQDSSIGFGAPVRANMR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS
Sbjct: 379  SERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVS 438

Query: 1764 FSALYEDQLVQVLMEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLR 1943
             +AL EDQLVQVLMEPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLR
Sbjct: 439  LAALNEDQLVQVLMEPKNALGKQFKKLFSMNNVKLHFTDAALRIIAKKAMSKNTGARGLR 498

Query: 1944 TILENLLMEAMYEIPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADI 2123
            TILEN+LM+AMYEIPD K+G +RIDAVVVD++++G+ D+PGCGAKIL GDGA +RYL+ I
Sbjct: 499  TILENILMDAMYEIPDAKSGEKRIDAVVVDEDAVGAVDQPGCGAKILYGDGAFERYLSQI 558

Query: 2124 KRQDMVNVGGCVGDFQEEGRASRAISL 2204
            K     +  G   D + E  +SRA+ +
Sbjct: 559  KVAG--DAAGSEADGEAELSSSRAMGM 583



 Score = 75.9 bits (185), Expect = 2e-10
 Identities = 35/60 (58%), Positives = 47/60 (78%), Gaps = 4/60 (6%)
 Frame = +3

Query: 420 MEVLFSNRSPP---CIDGAG-DRGGYQAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFK 587
           M++LFS+R PP      GAG   GGYQA+++CP C++AY+FRPH +APLQG+FVEIGR +
Sbjct: 1   MDILFSHRGPPSSFAAAGAGAGGGGYQALNLCPNCRSAYFFRPHLLAPLQGTFVEIGRVR 60


>AQK53104.1 CLP protease regulatory subunit CLPX3 mitochondrial [Zea mays]
          Length = 640

 Score =  631 bits (1628), Expect = 0.0
 Identities = 331/437 (75%), Positives = 370/437 (84%), Gaps = 4/437 (0%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A KEG+GG+NLG+DLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH +L     
Sbjct: 209  AGKEGWGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQTLQKGRS 268

Query: 1086 XXXXXXXXXXXXXXP-VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 1262
                            VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA
Sbjct: 269  GADLGGFNGEADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 328

Query: 1263 GYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQAL 1442
            GYVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQAL
Sbjct: 329  GYVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQAL 388

Query: 1443 LKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 1622
            LKMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA
Sbjct: 389  LKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 448

Query: 1623 PVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVL 1802
            PVRANMR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVL
Sbjct: 449  PVRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVL 508

Query: 1803 MEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYE 1982
            +EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILEN+LM++MYE
Sbjct: 509  IEPKNALGKQFKKLFSMNNVKLHFTDGALRIIAKKAMSKNTGARGLRTILENILMDSMYE 568

Query: 1983 IPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVG 2162
            IPD K+G +RIDAVVVD++++GS D+PGCGAKIL GDGALD+YL+ IK       G  VG
Sbjct: 569  IPDAKSGEKRIDAVVVDEDAVGSVDQPGCGAKILYGDGALDQYLSQIKVS-----GDGVG 623

Query: 2163 ---DFQEEGRASRAISL 2204
               D + E  +SRAI +
Sbjct: 624  SEMDGEAELSSSRAIGM 640



 Score =  122 bits (307), Expect = 3e-25
 Identities = 71/157 (45%), Positives = 90/157 (57%), Gaps = 10/157 (6%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVCPQIPSPCCSHRFQQERHKWE 350
           MS  LRWR+L S+     ++S L         +   G V P  P     HR  QER KWE
Sbjct: 1   MSGLLRWRRLVSAAT--RAASTLTAAECCPAAATAAGAVAPSPPP----HRRLQERRKWE 54

Query: 351 ------GGS----DEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRGGYQAVSM 500
                 GGS    DE + RRIRAE +CPRCSK M++LFS+R PP    A    GYQA+++
Sbjct: 55  SSSSGSGGSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPA---AAAGAGYQALNL 111

Query: 501 CPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRDRDRAA 611
           CP C++AY+F PH + PLQG+FVEIGR +    D  A
Sbjct: 112 CPNCRSAYFFLPHVLTPLQGTFVEIGRVRADLLDHPA 148


>XP_010252309.1 PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial
            [Nelumbo nucifera]
          Length = 678

 Score =  632 bits (1631), Expect = 0.0
 Identities = 329/434 (75%), Positives = 364/434 (83%)
 Frame = +3

Query: 903  FAQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXX 1082
            F +K G+GG+NLGKD PTPKEIC+ LDKFVIGQ RAKKVLSVAVYNHYKRIYHASL    
Sbjct: 246  FGEKNGWGGSNLGKDFPTPKEICKNLDKFVIGQQRAKKVLSVAVYNHYKRIYHASLQKGS 305

Query: 1083 XXXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 1262
                            VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA
Sbjct: 306  GAEPGNSEAENDDDS-VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 364

Query: 1263 GYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQAL 1442
            GYVGEDVESILYKLL VA+++VQAAQQGIVYIDEVDKITKKAES N SRDVSGEGVQQAL
Sbjct: 365  GYVGEDVESILYKLLTVAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQAL 424

Query: 1443 LKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 1622
            LKMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA
Sbjct: 425  LKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGA 484

Query: 1623 PVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVL 1802
            PVRANMR+G +TN  +TS+LLESVES DLIAYGLIPEF+GRFP+LVS SAL E QLVQVL
Sbjct: 485  PVRANMRTGGLTNAAVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALNEGQLVQVL 544

Query: 1803 MEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYE 1982
             EPKNALGKQYKKMF+MNNVKLHFTD             +TGARGLR ILE++L EAMYE
Sbjct: 545  KEPKNALGKQYKKMFSMNNVKLHFTDNALRLIAKKAMAKSTGARGLRAILESILTEAMYE 604

Query: 1983 IPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVG 2162
            IPDVK G++R+DAVV+D+E++GS D PG GAKILRGDGAL+RYL++ K +    V     
Sbjct: 605  IPDVKTGNDRVDAVVIDEEAVGSVDAPGLGAKILRGDGALERYLSETKSEGNGEVAEGEI 664

Query: 2163 DFQEEGRASRAISL 2204
            + + E  +SRA+S+
Sbjct: 665  EGESEVSSSRAMSM 678



 Score =  159 bits (403), Expect = 3e-37
 Identities = 86/185 (46%), Positives = 112/185 (60%), Gaps = 7/185 (3%)
 Frame = +3

Query: 174 SRFLRWRKL----TSSGVYLTSSSPLATHRLSRRLSICTGNVCPQIPSPCCSHRF--QQE 335
           S   RW+++           + S   + +R S++  ICT   C  + +          QE
Sbjct: 4   SGIFRWKRVIRETAGRAARFSVSETRSNYRFSQKSPICTRFNCLHVGTYRRRESLIGYQE 63

Query: 336 RHKWEGGSDEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRGGYQAVSMCPTCK 515
           RHKWEGGSD+FQTR+IRAE NCPRCSK M++LFSNR PP I GA DRG YQAV++CP CK
Sbjct: 64  RHKWEGGSDDFQTRKIRAEANCPRCSKQMDLLFSNRHPP-IYGA-DRGSYQAVNLCPNCK 121

Query: 516 TAYYFRPHKVAPLQGSFVEIGRFK-GRDRDRAAVXXXXXXXXXXXXXXXXXXKRSRVSLW 692
           TAYYFRP K+APLQGSF+EIGR + G+D ++ +V                   R R+S W
Sbjct: 122 TAYYFRPSKIAPLQGSFIEIGRVRGGKDSEKKSVSGDGGSGNGDATGEDDYGNRLRISFW 181

Query: 693 DLLRA 707
           + LR+
Sbjct: 182 ETLRS 186


>KXG30458.1 hypothetical protein SORBI_004G183800 [Sorghum bicolor]
          Length = 640

 Score =  629 bits (1623), Expect = 0.0
 Identities = 326/433 (75%), Positives = 364/433 (84%)
 Frame = +3

Query: 906  AQKEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXX 1085
            A KEG+GG+NLG+DLPTPKEIC+GLDK+VIGQ RAKKVLSVAVYNHYKRIYH SL     
Sbjct: 214  AGKEGWGGSNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSG 273

Query: 1086 XXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAG 1265
                           VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA 
Sbjct: 274  ADLGGFDGEADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAR 333

Query: 1266 YVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALL 1445
            YVGEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALL
Sbjct: 334  YVGEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALL 393

Query: 1446 KMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 1625
            KMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP
Sbjct: 394  KMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAP 453

Query: 1626 VRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLM 1805
            VRANMR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVL 
Sbjct: 454  VRANMRAGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLT 513

Query: 1806 EPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEI 1985
            EPKNALGKQ+KK+F+MNNVKLHFTD             NTGARGLRTILE +LM++MYEI
Sbjct: 514  EPKNALGKQFKKLFSMNNVKLHFTDGALRIIAKKAMSKNTGARGLRTILETILMDSMYEI 573

Query: 1986 PDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVGD 2165
            PD ++G +RIDAVVVD++++GS D+PGCGAKIL GDGALD+YL+ IK      V G    
Sbjct: 574  PDARSGEKRIDAVVVDEDAVGSVDQPGCGAKILYGDGALDQYLSQIK------VSGDGVA 627

Query: 2166 FQEEGRASRAISL 2204
             + +G   RAI +
Sbjct: 628  SEMDGETERAIGM 640



 Score =  126 bits (317), Expect = 1e-26
 Identities = 75/162 (46%), Positives = 92/162 (56%), Gaps = 15/162 (9%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVCPQIPSPCCSHRFQQERHKWE 350
           MS  LRWR+L  +          AT   S   +       P  P P   HR  QER KWE
Sbjct: 1   MSGLLRWRRLAGA----------ATRAASTLTAAECSPAAPLPPPP--PHRRLQERRKWE 48

Query: 351 --------GGS------DEFQTRRIRAEVNCPRCSKSMEVLFSNRSPP-CIDGAGDRGGY 485
                   GGS      DE + RRIRAE +CPRCSK M++LFS+R PP    GAG  GGY
Sbjct: 49  SSSSGSGSGGSSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPPTTAGAGAAGGY 108

Query: 486 QAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFKGRDRDRAA 611
           QA+++CP C++AY+FRPH +APLQG+FVEIGR +    D  A
Sbjct: 109 QALNLCPNCRSAYFFRPHVLAPLQGTFVEIGRVRADLLDHPA 150


>CBI16961.3 unnamed protein product, partial [Vitis vinifera]
          Length = 562

 Score =  625 bits (1613), Expect = 0.0
 Identities = 331/455 (72%), Positives = 367/455 (80%), Gaps = 24/455 (5%)
 Frame = +3

Query: 912  KEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKK--------------------VLSVA 1031
            + G+GG+NLGKDLPTPKEIC+GLDKFVIGQ RAKK                    VLSVA
Sbjct: 111  RNGWGGSNLGKDLPTPKEICKGLDKFVIGQERAKKLDFIPFSDFLVRSNWCQTWEVLSVA 170

Query: 1032 VYNHYKRIYHASLXXXXXXXXXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLAR 1211
            VYNHYKRIYH SL                    VELEKSNVLLMGPTGSGKTLLAKTLAR
Sbjct: 171  VYNHYKRIYHGSLQKGSGAESGTSEVDDDS---VELEKSNVLLMGPTGSGKTLLAKTLAR 227

Query: 1212 FVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAE 1391
            FVNVPFVIADATTLTQAGYVGEDVESILYKLL VA+++VQAAQQG+VYIDEVDKITKKAE
Sbjct: 228  FVNVPFVIADATTLTQAGYVGEDVESILYKLLTVAEFNVQAAQQGMVYIDEVDKITKKAE 287

Query: 1392 SQNSSRDVSGEGVQQALLKMLEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDL 1571
            S N SRDVSGEGVQQALLKMLEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAFVDL
Sbjct: 288  SLNLSRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDL 347

Query: 1572 EKTISERRQDSSIGFGAPVRANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFP 1751
            EKTIS+RRQDSSIGFGAPVRANMR+G +TN ++TS+LLESVES DLIAYGLIPEF+GRFP
Sbjct: 348  EKTISDRRQDSSIGFGAPVRANMRTGGLTNAVVTSSLLESVESSDLIAYGLIPEFIGRFP 407

Query: 1752 VLVSFSALYEDQLVQVLMEPKNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGA 1931
            +LVS SAL EDQLV+VL EPKNALGKQYKK+F+MNNVKLHFT+             NTGA
Sbjct: 408  ILVSLSALTEDQLVKVLTEPKNALGKQYKKLFSMNNVKLHFTEKALRQIAKKAMVKNTGA 467

Query: 1932 RGLRTILENLLMEAMYEIPDVKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRY 2111
            RGLR +LE++L EAMYEIPDVK G +R+DAVVVD+ES+GS + PGCG KILRGDGALD Y
Sbjct: 468  RGLRALLESILTEAMYEIPDVKTGKDRVDAVVVDEESVGSVNAPGCGGKILRGDGALDCY 527

Query: 2112 LADIKRQDMVNVGGCVGDFQ----EEGRASRAISL 2204
            LA+ K +D V  GG  GD +    E   +SRA+S+
Sbjct: 528  LAETKLKDPVESGGEAGDGELQEAESEVSSRAMSM 562



 Score = 76.6 bits (187), Expect = 8e-11
 Identities = 45/111 (40%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
 Frame = +3

Query: 420 MEVLFSNRSPPC----------IDGAGDRGGYQAVSMCPTCKTAYYFRPHKVAPLQGSFV 569
           M++LFSNR  P            +  G  G YQAV++CP CKTAYYFRP+K+APLQGSFV
Sbjct: 1   MDLLFSNRHFPSNFSPAVPTDSSNSKGSGGSYQAVNLCPNCKTAYYFRPYKIAPLQGSFV 60

Query: 570 EIGRFKGRDRDRAAVXXXXXXXXXXXXXXXXXXKRSRVSLWDLLRATYAGE 722
           EIG   G   +                       R R+S W+ LR +Y G+
Sbjct: 61  EIGSKNGGGHEE------------------DYGSRLRMSFWETLR-SYGGD 92


>XP_003575174.1 PREDICTED: CLP protease regulatory subunit CLPX1, mitochondrial-like
            [Brachypodium distachyon] KQJ99946.1 hypothetical protein
            BRADI_3g46170 [Brachypodium distachyon]
          Length = 640

 Score =  628 bits (1620), Expect = 0.0
 Identities = 322/431 (74%), Positives = 366/431 (84%)
 Frame = +3

Query: 912  KEGFGGANLGKDLPTPKEICEGLDKFVIGQHRAKKVLSVAVYNHYKRIYHASLXXXXXXX 1091
            K+G+GG+NLGKD PTPKEI +GLDK+VIGQ RAKKVLSVAVYNHYKRIYH S+       
Sbjct: 212  KDGWGGSNLGKDFPTPKEISKGLDKYVIGQERAKKVLSVAVYNHYKRIYHQSVQKGSGAD 271

Query: 1092 XXXXXXXXXXXXPVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 1271
                         VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV
Sbjct: 272  LGSSDGEADGDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYV 331

Query: 1272 GEDVESILYKLLMVADYDVQAAQQGIVYIDEVDKITKKAESQNSSRDVSGEGVQQALLKM 1451
            GEDVESILYKLL VAD++VQAAQQG+VYIDEVDKITKKAES N SRDVSGEGVQQALLKM
Sbjct: 332  GEDVESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKM 391

Query: 1452 LEGTIVNVPERGARKHPRGDNVQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVR 1631
            LEGTIVNVPE+GARKHPRGDN+QIDTKDILFICGGAF+DLEKTISERRQDSSIGFGAPVR
Sbjct: 392  LEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVR 451

Query: 1632 ANMRSGAVTNVIITSTLLESVESGDLIAYGLIPEFVGRFPVLVSFSALYEDQLVQVLMEP 1811
            A+MR+G +++  +TS+LLESVESGDLIAYGLIPEF+GRFP+LVS +AL EDQLVQVL EP
Sbjct: 452  ASMRTGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLTEP 511

Query: 1812 KNALGKQYKKMFNMNNVKLHFTDTXXXXXXXXXXXXNTGARGLRTILENLLMEAMYEIPD 1991
            KNALGKQ++K+F+MNNVKLHFTD+            NTGARGLRTILEN+LM++MYEIPD
Sbjct: 512  KNALGKQFRKLFSMNNVKLHFTDSALRIIAKKAMCKNTGARGLRTILENILMDSMYEIPD 571

Query: 1992 VKAGSERIDAVVVDDESLGSPDRPGCGAKILRGDGALDRYLADIKRQDMVNVGGCVGDFQ 2171
             K+G +RIDAVVVD++++GS DRPGCGAKIL GDG+ D YL+ IK   M +  G   D +
Sbjct: 572  TKSGEKRIDAVVVDEDAVGSVDRPGCGAKILYGDGSFDHYLSQIKA--MGDGAGSEADGE 629

Query: 2172 EEGRASRAISL 2204
             +  +SRA+S+
Sbjct: 630  ADLSSSRAMSM 640



 Score =  122 bits (305), Expect = 4e-25
 Identities = 68/154 (44%), Positives = 89/154 (57%), Gaps = 15/154 (9%)
 Frame = +3

Query: 171 MSRFLRWRKLTSSGVYLTSSSPLATHRLSRRLSICTGNVC-PQIPSPCCSHRFQQERHKW 347
           MS  LRWR+L ++               +R  S  T   C P   +    HR  Q R KW
Sbjct: 1   MSGLLRWRRLAAAA--------------TRAASTLTAVECSPATAAAAPPHRLLQGRRKW 46

Query: 348 EGGS--------------DEFQTRRIRAEVNCPRCSKSMEVLFSNRSPPCIDGAGDRGGY 485
           EG S              D+ + RRIRAE +CPRCSK M++LFS+R+PP    AG  GGY
Sbjct: 47  EGSSSSSGGGSSSSSSSTDDTEPRRIRAEAHCPRCSKHMDILFSHRAPPSSAPAG-AGGY 105

Query: 486 QAVSMCPTCKTAYYFRPHKVAPLQGSFVEIGRFK 587
           QA+++CP C+TAY+FRP+ +APLQG+FVEIGR +
Sbjct: 106 QALNLCPNCRTAYFFRPNILAPLQGTFVEIGRVR 139