BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00013505
         (471 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP48169.1 Retrovirus-related Pol polyprotein from transposon TN...    40   2e-06
KYP52070.1 Copia protein [Cajanus cajan]                               39   9e-06

>KYP48169.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 224

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = -3

Query: 349 KPP*SALVYYSPLQLHQRYGHPSVEKLKRLEPS 251
           +PP S +V  SP  LH R GHPS+ KLK L PS
Sbjct: 98  QPPVSCVVVLSPTLLHDRLGHPSLSKLKLLVPS 130



 Score = 38.1 bits (87), Expect(2) = 2e-06
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
 Frame = -1

Query: 252 LMQLQKFSCKLYQLRKHHRISFP------CKPFFIFVSYFSFNS**HLWFFSNH*F*WI* 91
           L  L++  C+  QL KH R SFP      C   F  + +        +W  S+       
Sbjct: 131 LKNLEELGCESCQLGKHVRPSFPKQTDTRCNSIFTTIHF-------DIWGPSHVTSFGFR 183

Query: 90  YFVTFDNDFSKMTGIYLLK 34
           YFVTF ++FS+ T +YL+K
Sbjct: 184 YFVTFVDEFSRCTWVYLMK 202


>KYP52070.1 Copia protein [Cajanus cajan]
          Length = 674

 Score = 38.5 bits (88), Expect(2) = 9e-06
 Identities = 18/33 (54%), Positives = 21/33 (63%)
 Frame = -3

Query: 349 KPP*SALVYYSPLQLHQRYGHPSVEKLKRLEPS 251
           +PP S +   SP  LH R GHPS+ KLK L PS
Sbjct: 152 QPPVSCVAILSPKLLHDRLGHPSLSKLKLLVPS 184



 Score = 38.1 bits (87), Expect(2) = 9e-06
 Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
 Frame = -1

Query: 252 LMQLQKFSCKLYQLRKHHRISFP------CKPFFIFVSYFSFNS**HLWFFSNH*F*WI* 91
           L +L++  C+  QL KH R SFP      C   F   + F F+    +W  S        
Sbjct: 185 LKKLEELGCESCQLGKHVRSSFPKQTDKRCNSIF---TTFHFD----IWGPSRVTSFGFR 237

Query: 90  YFVTFDNDFSKMTGIYLLK 34
           YFVTF ++FS+ T +YL+K
Sbjct: 238 YFVTFIDEFSRYTWVYLMK 256