BLASTX nr result
ID: Alisma22_contig00011948
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Alisma22_contig00011948 (1986 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_020113503.1 RNA pseudouridine synthase 2, chloroplastic isofo... 484 e-163 XP_009382727.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 482 e-162 XP_003634352.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 480 e-161 XP_015887376.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 476 e-160 XP_018808134.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 474 e-159 XP_008445320.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158 XP_008445318.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158 XP_010241330.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158 XP_010241329.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158 OMO87357.1 hypothetical protein CCACVL1_09113 [Corchorus capsula... 471 e-158 XP_018731676.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158 XP_010241328.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158 KCW70505.1 hypothetical protein EUGRSUZ_F03712 [Eucalyptus grandis] 472 e-158 XP_011649466.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 469 e-157 XP_011649465.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 469 e-157 XP_012078835.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 468 e-157 KHG01344.1 hypothetical protein F383_22314 [Gossypium arboreum] 468 e-157 XP_017621288.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 466 e-156 XP_016687702.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 466 e-156 XP_006473714.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 466 e-156 >XP_020113503.1 RNA pseudouridine synthase 2, chloroplastic isoform X1 [Ananas comosus] OAY68405.1 RNA pseudouridine synthase 2, chloroplastic [Ananas comosus] Length = 430 Score = 484 bits (1245), Expect = e-163 Identities = 255/404 (63%), Positives = 307/404 (75%), Gaps = 11/404 (2%) Frame = +1 Query: 205 LRFACAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VS 378 LR C++++ + D + R +++ G RLEE +E G GRSRLDAW++SR+ VS Sbjct: 27 LRAMCSSSALD------PDPNPSPRLRSSHAGARLEEAVEVGSGRSRLDAWLASRIRGVS 80 Query: 379 RARVQSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSH 558 RAR+QSSIR GLV VNGRTV+KVS ++K GD + CTVSEL PLRAE EDIPLDIVYED H Sbjct: 81 RARIQSSIRSGLVAVNGRTVDKVSHMVKGGDMISCTVSELQPLRAEAEDIPLDIVYEDEH 140 Query: 559 VIVVNKPAHMVVHPAPGNRNGTLVNAILNHCQLPV------ETHSTIFXXXXXXXXXXXX 720 V+VVNKPAHMVVHPAPGN NGTLVNAIL+HC+LP+ T S Sbjct: 141 VLVVNKPAHMVVHPAPGNANGTLVNAILHHCRLPMVTCVNDSTMSESDESLDSSDEEIDV 200 Query: 721 XXXXAFSYPESS---SAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRV 891 FS E S A VRPGIVHRLDKGTSGLLVVAK+ HSHAHL+EQFK HTI+RV Sbjct: 201 YHADQFSTEELSLEVPEALVRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKQHTINRV 260 Query: 892 YVSLTAGVPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGAC 1071 Y+SLT GVP+P SARI+IPIARDPNNR+RMVA+SGS N+++AR AASR+ V+EVLAGG Sbjct: 261 YISLTTGVPNPYSARIEIPIARDPNNRVRMVAISGS-NHRHARYAASRYEVIEVLAGGGS 319 Query: 1072 ALVEWRLETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILS 1251 ALV+WRLETGRTHQIRAHAKYL +PLLGDEVYGGT ++ LSLL+ + P S HG+++ ++S Sbjct: 320 ALVKWRLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMALSLLKPRTPSSHHGHLSHMIS 379 Query: 1252 NLQRPSLHALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRIS 1383 L RP LHALSLGF+HP TGE ++FSCPPP DFS+V+ L I+ Sbjct: 380 KLDRPCLHALSLGFEHPQTGEFLRFSCPPPDDFSEVVDQLRGIN 423 >XP_009382727.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Musa acuminata subsp. malaccensis] XP_009382728.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Musa acuminata subsp. malaccensis] Length = 440 Score = 482 bits (1241), Expect = e-162 Identities = 247/376 (65%), Positives = 290/376 (77%), Gaps = 11/376 (2%) Frame = +1 Query: 289 NYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQVIK 462 N+ G+RLEE +E G ++R+D+WISSR+ VSRAR+QSSIR GLV VNGRTV KVS +IK Sbjct: 59 NHAGVRLEERVEVGAEKTRIDSWISSRIRGVSRARIQSSIRSGLVAVNGRTVNKVSHIIK 118 Query: 463 AGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNAIL 642 GD V C +S+LLPL+AEPED+PLDIVYED HVIVVNKPAHMVVHPAPGN NGTLVNAIL Sbjct: 119 GGDMVSCMISKLLPLKAEPEDMPLDIVYEDEHVIVVNKPAHMVVHPAPGNANGTLVNAIL 178 Query: 643 NHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSS---------AASVRPGIVHRL 795 +HC+LP+ + + SS A VRPGIVHRL Sbjct: 179 HHCRLPIRAFANNIQISDTEECSESSDSDIEEVCADQSSMEEVGIENYEALVRPGIVHRL 238 Query: 796 DKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRI 975 DKGTSGLLVVAK+ HSHAHL+EQFK HTIHRVY+SLT+GVP+PS RI+IPIARD NNRI Sbjct: 239 DKGTSGLLVVAKDDHSHAHLAEQFKKHTIHRVYMSLTSGVPNPSYGRIEIPIARDSNNRI 298 Query: 976 RMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLG 1155 RMVAVSG N+++AR AASR++V+E GG ALV+WRLETGRTHQIRAHAKYL IPLLG Sbjct: 299 RMVAVSGLNNSRHARYAASRYKVIEDFMGGGAALVQWRLETGRTHQIRAHAKYLGIPLLG 358 Query: 1156 DEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCP 1335 DEVYGGT ++ LSLLR + PP+ HG+++ I+S LQRP LHA S+GFKHP TGE ++FSCP Sbjct: 359 DEVYGGTKDMALSLLRPRTPPTYHGHLSNIISKLQRPCLHAFSIGFKHPHTGEFLQFSCP 418 Query: 1336 PPSDFSKVLSLLHRIS 1383 PP DFSKVL L IS Sbjct: 419 PPDDFSKVLDQLRSIS 434 >XP_003634352.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Vitis vinifera] CBI18920.3 unnamed protein product, partial [Vitis vinifera] Length = 433 Score = 480 bits (1235), Expect = e-161 Identities = 243/378 (64%), Positives = 290/378 (76%), Gaps = 7/378 (1%) Frame = +1 Query: 280 RNTNYGGIRLEETM----EGPGRSRLDAWISSRL-PVSRARVQSSIREGLVFVNGRTVEK 444 R TNY G+RLEET+ G+ RLD+WISSR+ +SRARVQSSIR GLV VN R V+K Sbjct: 54 RRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDK 113 Query: 445 VSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGT 624 VS VI+AGDKV CT+SEL PLRAEPEDIPLDIVYED HV+VVNKPAHMVVHPAPGN +GT Sbjct: 114 VSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGT 173 Query: 625 LVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAA--SVRPGIVHRLD 798 LVN IL+HC LP + +F+ ++ ++RPGIVHRLD Sbjct: 174 LVNGILHHCSLP----TVALPNRDSEEDDISDDEFNSFAAGQNCGTCETNIRPGIVHRLD 229 Query: 799 KGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIR 978 KGTSGLLVVAK+ HSHAHLSEQFK H+IHRVY+SLT+GVP+P S R++IP+ RDPNNRIR Sbjct: 230 KGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIR 289 Query: 979 MVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGD 1158 M AV G N+ AR AASR++V+E+LA G ALVEWRLETGRTHQIRAHAKYL IPLLGD Sbjct: 290 MTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGD 349 Query: 1159 EVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPP 1338 EVYGGT N+ LSLLR +IP S HG + +++S L RP LHA++LGF HP TG++V FSC P Sbjct: 350 EVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQP 409 Query: 1339 PSDFSKVLSLLHRISRDK 1392 P DF+++LS L +IS +K Sbjct: 410 PEDFAEILSWLRKISTEK 427 >XP_015887376.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Ziziphus jujuba] Length = 442 Score = 476 bits (1224), Expect = e-160 Identities = 243/392 (61%), Positives = 294/392 (75%), Gaps = 2/392 (0%) Frame = +1 Query: 223 ATSTELVADEHKDKSWMERRNTNYGGIRLEETMEGPGRS-RLDAWISSRLP-VSRARVQS 396 +TST + + D++ RN NY G+RLEET+ R RLD+WISSR+ +SRARVQS Sbjct: 51 STSTGVSISDGNDEALAGHRN-NYSGVRLEETVAVDSRKLRLDSWISSRVSGISRARVQS 109 Query: 397 SIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNK 576 SIR GLV VNGR V+KVS +KAGD+V CT+SEL PLRAEPE+IPLDIVYED HV+VVNK Sbjct: 110 SIRSGLVSVNGRIVDKVSHNVKAGDRVNCTISELQPLRAEPENIPLDIVYEDDHVLVVNK 169 Query: 577 PAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESS 756 PAHMVVHPAPGN GTLVN IL+HC LP S + S+ Sbjct: 170 PAHMVVHPAPGNATGTLVNGILHHCSLPTVAFSNHDGLSDSEDNCDDGLGYFSVDQSSST 229 Query: 757 SAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSAR 936 ASVRPGIVHRLDKGTSGLLVVAKN SHAHLS+QFK HTIHRVY+SLT+GVPSP + R Sbjct: 230 CQASVRPGIVHRLDKGTSGLLVVAKNELSHAHLSDQFKLHTIHRVYISLTSGVPSPLAGR 289 Query: 937 IDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQI 1116 +DIPI RD NNRIRM A+ G + +K R AASR++V+EVLAGG ALVEWRLETGRTHQI Sbjct: 290 VDIPIGRDSNNRIRMTAIPGPIKSKQGRHAASRYKVIEVLAGGGSALVEWRLETGRTHQI 349 Query: 1117 RAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFK 1296 RAHAK+L IPLLGDE+YGGT ++ LSLL + P S HG +++++S +RP LHA++L FK Sbjct: 350 RAHAKHLGIPLLGDELYGGTKSMALSLLWPRTPSSCHGQLSQLVSEFERPCLHAMALRFK 409 Query: 1297 HPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 HP TG+++ FSCPPPSDF+++L+ L + S K Sbjct: 410 HPHTGKNIHFSCPPPSDFAEILNQLRKFSTAK 441 >XP_018808134.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Juglans regia] Length = 446 Score = 474 bits (1221), Expect = e-159 Identities = 245/408 (60%), Positives = 302/408 (74%), Gaps = 10/408 (2%) Frame = +1 Query: 199 ASLRFACAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP- 372 +SLR A+S+ + +DK + R N+GG++LE+T+ G+ RLD+WISSR+ Sbjct: 36 SSLRICFVASSSSGSTNSDEDKEDLAGRRANFGGVQLEDTVSLNSGKLRLDSWISSRIGG 95 Query: 373 VSRARVQSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYED 552 +SRARVQSSIR GLV VNGR V+KVS +K GDKV CT+SEL PLRA PEDIPLDIV+ED Sbjct: 96 ISRARVQSSIRSGLVAVNGRVVDKVSHNVKTGDKVNCTISELQPLRAVPEDIPLDIVFED 155 Query: 553 SHVIVVNKPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXX 732 HV+VVNKPAHMVVHPAPGN GTLVN +L+HC PV S Sbjct: 156 EHVLVVNKPAHMVVHPAPGNATGTLVNGVLHHCSPPVVAFSN--EEVLSDAEDISDDELS 213 Query: 733 AFSYPES--------SSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHR 888 +FS ++ S AS+RPGIVHRLDKGTSGLLVVAK+ HSHA+LSEQFK HTI R Sbjct: 214 SFSAGQNPNDGLYSRRSGASIRPGIVHRLDKGTSGLLVVAKDEHSHANLSEQFKLHTIQR 273 Query: 889 VYVSLTAGVPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGA 1068 +YVSLT+GVPSP + R+++PI RD NNRIRM A+ GS ++ AR AASR++V+E+LAGG+ Sbjct: 274 LYVSLTSGVPSPMAGRVEVPIGRDLNNRIRMAAIPGSNISRQARHAASRYKVIEILAGGS 333 Query: 1069 CALVEWRLETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEIL 1248 ALVEWRLETGRTHQIRAHAKYL IPLLGDEVYGGT ++ LSLLR + PPSRHG + +++ Sbjct: 334 SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLRPRTPPSRHGQLLQLV 393 Query: 1249 SNLQRPSLHALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 S L+RP LHAL+LGF HP T E+V F CPPP+DF+++L L +I K Sbjct: 394 SRLERPCLHALALGFMHPHTMENVYFQCPPPADFAEILGQLRKIGTVK 441 >XP_008445320.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Cucumis melo] Length = 429 Score = 472 bits (1214), Expect = e-158 Identities = 243/398 (61%), Positives = 296/398 (74%), Gaps = 2/398 (0%) Frame = +1 Query: 205 LRFACAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VS 378 LRF+ +S DE+ + R NY G RLEET++ PG+ RLD+WISSR+ +S Sbjct: 33 LRFSANFSSRCSDYDEYSEAQ--SERIANYAGTRLEETVDINPGKVRLDSWISSRINGIS 90 Query: 379 RARVQSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSH 558 RARVQSSIR GLV VNGR ++KVS +KAGD + CT+SEL PLRAEPEDI LDIVYED H Sbjct: 91 RARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEH 150 Query: 559 VIVVNKPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAF 738 V+VVNKPAHMVVHPAPGN GTLVNAILNHC LP+ + ST F Sbjct: 151 VLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVSTSTGEHQSDSDVSDDEFSSIEVF 210 Query: 739 SYPESSSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVP 918 S S A +RPGIVHRLDKGTSGLLVVAK+ HSHAHLS QFK H+I RVY+SLT GVP Sbjct: 211 S---RVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP 267 Query: 919 SPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLET 1098 ++ RI+IPI RDPNNRIRM A G+ NN +A+ AASR+ V+E+LA G +LVEWRLET Sbjct: 268 PSTAGRIEIPICRDPNNRIRMTATHGTKNNPHAKHAASRYNVMEILAQGGSSLVEWRLET 327 Query: 1099 GRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHA 1278 GRTHQIRAHAKY+ IPLLGDEVYGGT ++ +SLLRT+ + HG + +++S+L+RP LHA Sbjct: 328 GRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHA 387 Query: 1279 LSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 L+LGF HP TG++++FSCPPP+DF+++LS L I K Sbjct: 388 LTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKK 425 >XP_008445318.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Cucumis melo] XP_008445319.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Cucumis melo] Length = 431 Score = 472 bits (1214), Expect = e-158 Identities = 243/398 (61%), Positives = 296/398 (74%), Gaps = 2/398 (0%) Frame = +1 Query: 205 LRFACAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VS 378 LRF+ +S DE+ + R NY G RLEET++ PG+ RLD+WISSR+ +S Sbjct: 33 LRFSANFSSRCSDYDEYSEAQ--SERIANYAGTRLEETVDINPGKVRLDSWISSRINGIS 90 Query: 379 RARVQSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSH 558 RARVQSSIR GLV VNGR ++KVS +KAGD + CT+SEL PLRAEPEDI LDIVYED H Sbjct: 91 RARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEH 150 Query: 559 VIVVNKPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAF 738 V+VVNKPAHMVVHPAPGN GTLVNAILNHC LP+ + ST F Sbjct: 151 VLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVSTSTGEHQSDSDVSDDEFSSIEVF 210 Query: 739 SYPESSSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVP 918 S S A +RPGIVHRLDKGTSGLLVVAK+ HSHAHLS QFK H+I RVY+SLT GVP Sbjct: 211 S---RVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP 267 Query: 919 SPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLET 1098 ++ RI+IPI RDPNNRIRM A G+ NN +A+ AASR+ V+E+LA G +LVEWRLET Sbjct: 268 PSTAGRIEIPICRDPNNRIRMTATHGTKNNPHAKHAASRYNVMEILAQGGSSLVEWRLET 327 Query: 1099 GRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHA 1278 GRTHQIRAHAKY+ IPLLGDEVYGGT ++ +SLLRT+ + HG + +++S+L+RP LHA Sbjct: 328 GRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHA 387 Query: 1279 LSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 L+LGF HP TG++++FSCPPP+DF+++LS L I K Sbjct: 388 LTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKK 425 >XP_010241330.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3 [Nelumbo nucifera] Length = 443 Score = 472 bits (1215), Expect = e-158 Identities = 248/400 (62%), Positives = 302/400 (75%), Gaps = 8/400 (2%) Frame = +1 Query: 217 CAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARV 390 C+ +ST A +++ RR N+ G+ LE+T+E +SR+D+WISSR+P +SRARV Sbjct: 41 CSFSSTGESASDYQSSEPQNRRG-NFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARV 99 Query: 391 QSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVV 570 QSSI+ GLV VNGR ++KVS VI+AGDKV CT+ EL PLRAEPEDIPLDIVYED V+VV Sbjct: 100 QSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVV 159 Query: 571 NKPAHMVVHPAPGNRNGTLVNAILNHCQLPVE--THSTIFXXXXXXXXXXXXXXXXAFSY 744 NKPAHMVVHPAPGN NGTLVN IL+HC LP+ T+S + Sbjct: 160 NKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGS 219 Query: 745 PESSSA----ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAG 912 E ++ SVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI+R+Y+SLT G Sbjct: 220 MEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCG 279 Query: 913 VPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRL 1092 VPS +S RI++PI RD +NRIRM AV +++ AR AASR+RV+EVLAGG ALVEWRL Sbjct: 280 VPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRL 339 Query: 1093 ETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSL 1272 ETGRTHQIRAHAKYL IPLLGDEVYGGT N+ LSLLRT+ S HG +++++S LQRP L Sbjct: 340 ETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCL 399 Query: 1273 HALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 HA +LGFKHP TGE+++FSCPPP+DF++VLS L I +K Sbjct: 400 HAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSIGIEK 439 >XP_010241329.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Nelumbo nucifera] Length = 453 Score = 472 bits (1215), Expect = e-158 Identities = 248/400 (62%), Positives = 302/400 (75%), Gaps = 8/400 (2%) Frame = +1 Query: 217 CAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARV 390 C+ +ST A +++ RR N+ G+ LE+T+E +SR+D+WISSR+P +SRARV Sbjct: 41 CSFSSTGESASDYQSSEPQNRRG-NFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARV 99 Query: 391 QSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVV 570 QSSI+ GLV VNGR ++KVS VI+AGDKV CT+ EL PLRAEPEDIPLDIVYED V+VV Sbjct: 100 QSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVV 159 Query: 571 NKPAHMVVHPAPGNRNGTLVNAILNHCQLPVE--THSTIFXXXXXXXXXXXXXXXXAFSY 744 NKPAHMVVHPAPGN NGTLVN IL+HC LP+ T+S + Sbjct: 160 NKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGS 219 Query: 745 PESSSA----ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAG 912 E ++ SVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI+R+Y+SLT G Sbjct: 220 MEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCG 279 Query: 913 VPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRL 1092 VPS +S RI++PI RD +NRIRM AV +++ AR AASR+RV+EVLAGG ALVEWRL Sbjct: 280 VPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRL 339 Query: 1093 ETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSL 1272 ETGRTHQIRAHAKYL IPLLGDEVYGGT N+ LSLLRT+ S HG +++++S LQRP L Sbjct: 340 ETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCL 399 Query: 1273 HALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 HA +LGFKHP TGE+++FSCPPP+DF++VLS L I +K Sbjct: 400 HAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSIGIEK 439 >OMO87357.1 hypothetical protein CCACVL1_09113 [Corchorus capsularis] Length = 432 Score = 471 bits (1212), Expect = e-158 Identities = 242/377 (64%), Positives = 289/377 (76%), Gaps = 3/377 (0%) Frame = +1 Query: 286 TNYGGIRLEETMEGP--GRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQV 456 T+Y G++LEET++ G+ RLD+WISSR+ +SRARVQSSI+ GLV VNGR V+KVS Sbjct: 61 TSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHG 120 Query: 457 IKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNA 636 ++AGDKV C +SEL PLRAEPEDIPLDIVYED HV+VVNKP HMVVHPAPGN GTLVN Sbjct: 121 LRAGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNG 180 Query: 637 ILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLDKGTSGL 816 IL+HC LP S F Y E+++AA +RPGIVHRLDKGTSGL Sbjct: 181 ILHHCSLPTVALSE----KELLSDTEDGSDDEGFPYGENAAAA-IRPGIVHRLDKGTSGL 235 Query: 817 LVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIRMVAVSG 996 LVVAK+ HSHAHLSEQFK HTI RVY+SLT GVPSPS+ R+DIPI RD NNR+RMVAV G Sbjct: 236 LVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDIPIGRDSNNRVRMVAVPG 295 Query: 997 SVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGDEVYGGT 1176 + AR AASR++V+EVLAGG ALV+WRLETGRTHQIRAHAKY+ IPLLGDEVYGGT Sbjct: 296 ISHPGRARHAASRYKVIEVLAGGGSALVQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGT 355 Query: 1177 NNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPPPSDFSK 1356 N+VLSLLR + PPS + ++ ++S L+RP LHAL LGF+HP + E++ FSCPPP DF+ Sbjct: 356 KNMVLSLLRPRTPPSYNDQLSRLVSRLERPYLHALVLGFQHPQSSENMHFSCPPPPDFTG 415 Query: 1357 VLSLLHRISRDK*YLME 1407 +LS L +I +K L E Sbjct: 416 ILSQLRKIGVEKPILKE 432 >XP_018731676.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Eucalyptus grandis] Length = 453 Score = 472 bits (1214), Expect = e-158 Identities = 245/378 (64%), Positives = 285/378 (75%), Gaps = 9/378 (2%) Frame = +1 Query: 286 TNYGGIRLEETMEG--PGRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQV 456 + Y G+RL ET++ PG+ RLDAWISSR+ VSRARVQSSIR GLV VNGR V+KVS Sbjct: 72 SGYAGVRLRETVDAAKPGKLRLDAWISSRIQGVSRARVQSSIRSGLVSVNGRVVDKVSHN 131 Query: 457 IKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNA 636 ++AGD V CT+SEL PLRAEPEDIP+DIVYED HV+VVNKPAHMVVHPAPGN +GTLVNA Sbjct: 132 VRAGDMVDCTISELQPLRAEPEDIPVDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNA 191 Query: 637 ILNHCQLP------VETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLD 798 IL+HC LP E S + S S SVRPGIVHRLD Sbjct: 192 ILHHCSLPTVAFSETELLSEGEDVSDDESSSSTACETSTKGFNSSESGGSVRPGIVHRLD 251 Query: 799 KGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIR 978 KGTSGLLVVAKN SHAHLSEQFK HTI RVYVSLT GVPS +S RI++PI RD NNRIR Sbjct: 252 KGTSGLLVVAKNERSHAHLSEQFKMHTIRRVYVSLTNGVPSATSGRIEVPIGRDTNNRIR 311 Query: 979 MVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGD 1158 M A+ G N + AR AASR++V+EVLAGG+ ALVEWRLETGRTHQIRAHAKY+ IPLLGD Sbjct: 312 MSAIPGPSNGRQARYAASRYKVIEVLAGGSSALVEWRLETGRTHQIRAHAKYVGIPLLGD 371 Query: 1159 EVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPP 1338 EVYGGT N++LSLL+ K+P R ++E++S L+RP LHA+SLGF HP TGE+V+FSC P Sbjct: 372 EVYGGTKNMILSLLQAKLPIGRQSQLSELVSKLERPCLHAVSLGFIHPYTGENVQFSCQP 431 Query: 1339 PSDFSKVLSLLHRISRDK 1392 P DFS++L L R+ K Sbjct: 432 PEDFSEILCQLRRLGMKK 449 >XP_010241328.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Nelumbo nucifera] Length = 471 Score = 472 bits (1215), Expect = e-158 Identities = 248/400 (62%), Positives = 302/400 (75%), Gaps = 8/400 (2%) Frame = +1 Query: 217 CAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARV 390 C+ +ST A +++ RR N+ G+ LE+T+E +SR+D+WISSR+P +SRARV Sbjct: 41 CSFSSTGESASDYQSSEPQNRRG-NFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARV 99 Query: 391 QSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVV 570 QSSI+ GLV VNGR ++KVS VI+AGDKV CT+ EL PLRAEPEDIPLDIVYED V+VV Sbjct: 100 QSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVV 159 Query: 571 NKPAHMVVHPAPGNRNGTLVNAILNHCQLPVE--THSTIFXXXXXXXXXXXXXXXXAFSY 744 NKPAHMVVHPAPGN NGTLVN IL+HC LP+ T+S + Sbjct: 160 NKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGS 219 Query: 745 PESSSA----ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAG 912 E ++ SVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI+R+Y+SLT G Sbjct: 220 MEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCG 279 Query: 913 VPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRL 1092 VPS +S RI++PI RD +NRIRM AV +++ AR AASR+RV+EVLAGG ALVEWRL Sbjct: 280 VPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRL 339 Query: 1093 ETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSL 1272 ETGRTHQIRAHAKYL IPLLGDEVYGGT N+ LSLLRT+ S HG +++++S LQRP L Sbjct: 340 ETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCL 399 Query: 1273 HALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 HA +LGFKHP TGE+++FSCPPP+DF++VLS L I +K Sbjct: 400 HAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSIGIEK 439 >KCW70505.1 hypothetical protein EUGRSUZ_F03712 [Eucalyptus grandis] Length = 462 Score = 472 bits (1214), Expect = e-158 Identities = 245/378 (64%), Positives = 285/378 (75%), Gaps = 9/378 (2%) Frame = +1 Query: 286 TNYGGIRLEETMEG--PGRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQV 456 + Y G+RL ET++ PG+ RLDAWISSR+ VSRARVQSSIR GLV VNGR V+KVS Sbjct: 65 SGYAGVRLRETVDAAKPGKLRLDAWISSRIQGVSRARVQSSIRSGLVSVNGRVVDKVSHN 124 Query: 457 IKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNA 636 ++AGD V CT+SEL PLRAEPEDIP+DIVYED HV+VVNKPAHMVVHPAPGN +GTLVNA Sbjct: 125 VRAGDMVDCTISELQPLRAEPEDIPVDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNA 184 Query: 637 ILNHCQLP------VETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLD 798 IL+HC LP E S + S S SVRPGIVHRLD Sbjct: 185 ILHHCSLPTVAFSETELLSEGEDVSDDESSSSTACETSTKGFNSSESGGSVRPGIVHRLD 244 Query: 799 KGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIR 978 KGTSGLLVVAKN SHAHLSEQFK HTI RVYVSLT GVPS +S RI++PI RD NNRIR Sbjct: 245 KGTSGLLVVAKNERSHAHLSEQFKMHTIRRVYVSLTNGVPSATSGRIEVPIGRDTNNRIR 304 Query: 979 MVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGD 1158 M A+ G N + AR AASR++V+EVLAGG+ ALVEWRLETGRTHQIRAHAKY+ IPLLGD Sbjct: 305 MSAIPGPSNGRQARYAASRYKVIEVLAGGSSALVEWRLETGRTHQIRAHAKYVGIPLLGD 364 Query: 1159 EVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPP 1338 EVYGGT N++LSLL+ K+P R ++E++S L+RP LHA+SLGF HP TGE+V+FSC P Sbjct: 365 EVYGGTKNMILSLLQAKLPIGRQSQLSELVSKLERPCLHAVSLGFIHPYTGENVQFSCQP 424 Query: 1339 PSDFSKVLSLLHRISRDK 1392 P DFS++L L R+ K Sbjct: 425 PEDFSEILCQLRRLGMKK 442 >XP_011649466.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Cucumis sativus] Length = 430 Score = 469 bits (1207), Expect = e-157 Identities = 238/390 (61%), Positives = 290/390 (74%), Gaps = 2/390 (0%) Frame = +1 Query: 229 STELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARVQSSI 402 ST +D + R NY G RLEET++ PG+ RLD+WIS R+ +SRARVQSSI Sbjct: 40 STRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSI 99 Query: 403 REGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPA 582 R GLV VNGR ++KVS +KAGD + CT+SEL PLRAEPEDI LDIVYED HV+VVNKPA Sbjct: 100 RAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPA 159 Query: 583 HMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSA 762 HMVVHPAPGN GTLVNAILNHC LP+ ST FS S Sbjct: 160 HMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFS---RVSE 216 Query: 763 ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARID 942 A +RPGIVHRLDKGTSGLLVVAK+ HSHAHLS QFK H+I RVY+SLT GVP ++ RI+ Sbjct: 217 APIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE 276 Query: 943 IPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRA 1122 +PI RDPNNRIRM A+ G+ NN +A+ AASR+ V+E+LA G +LVEWRLETGRTHQIRA Sbjct: 277 MPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRA 336 Query: 1123 HAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHP 1302 HAKY+ IPLLGDEVYGGT ++ +SLLRT+ + HG + +++S+L+RP LHAL+LGF HP Sbjct: 337 HAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHP 396 Query: 1303 DTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 TG++++FSCPPP+DF+++LS L I K Sbjct: 397 HTGKNIRFSCPPPTDFTEILSQLREIGTQK 426 >XP_011649465.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Cucumis sativus] KGN62268.1 hypothetical protein Csa_2G346580 [Cucumis sativus] Length = 432 Score = 469 bits (1207), Expect = e-157 Identities = 238/390 (61%), Positives = 290/390 (74%), Gaps = 2/390 (0%) Frame = +1 Query: 229 STELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARVQSSI 402 ST +D + R NY G RLEET++ PG+ RLD+WIS R+ +SRARVQSSI Sbjct: 40 STRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSI 99 Query: 403 REGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPA 582 R GLV VNGR ++KVS +KAGD + CT+SEL PLRAEPEDI LDIVYED HV+VVNKPA Sbjct: 100 RAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPA 159 Query: 583 HMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSA 762 HMVVHPAPGN GTLVNAILNHC LP+ ST FS S Sbjct: 160 HMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFS---RVSE 216 Query: 763 ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARID 942 A +RPGIVHRLDKGTSGLLVVAK+ HSHAHLS QFK H+I RVY+SLT GVP ++ RI+ Sbjct: 217 APIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE 276 Query: 943 IPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRA 1122 +PI RDPNNRIRM A+ G+ NN +A+ AASR+ V+E+LA G +LVEWRLETGRTHQIRA Sbjct: 277 MPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRA 336 Query: 1123 HAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHP 1302 HAKY+ IPLLGDEVYGGT ++ +SLLRT+ + HG + +++S+L+RP LHAL+LGF HP Sbjct: 337 HAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHP 396 Query: 1303 DTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 TG++++FSCPPP+DF+++LS L I K Sbjct: 397 HTGKNIRFSCPPPTDFTEILSQLREIGTQK 426 >XP_012078835.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Jatropha curcas] XP_012078836.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Jatropha curcas] Length = 426 Score = 468 bits (1203), Expect = e-157 Identities = 239/375 (63%), Positives = 281/375 (74%), Gaps = 2/375 (0%) Frame = +1 Query: 274 ERRNTNYGGIRLEETMEGP-GRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKV 447 + + NY G+RLEET+E G+ RLD+WISSR+ +SRARVQSSI+ GLV VNGR V+KV Sbjct: 57 QNQRINYAGLRLEETVEAKSGKLRLDSWISSRISGISRARVQSSIKSGLVAVNGRVVDKV 116 Query: 448 SQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTL 627 S +K GDKVICT+SEL PLRAE EDIPLDI+YED H++VVNKP HMVVHPAPGN GTL Sbjct: 117 SHSVKVGDKVICTISELQPLRAEAEDIPLDIIYEDDHLLVVNKPPHMVVHPAPGNPTGTL 176 Query: 628 VNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLDKGT 807 VN IL+HC LP S+ SS +SVRPGIVHRLDKGT Sbjct: 177 VNGILHHCSLPTVVTSSQEVLSDVEDISDDEGSC------SSSCVSSVRPGIVHRLDKGT 230 Query: 808 SGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIRMVA 987 SGLLVVAK+ H+HAHLSEQFK HTI RVY+SLT+GVPS + RIDIPI RD NNRIRM A Sbjct: 231 SGLLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVPSALTGRIDIPIGRDVNNRIRMAA 290 Query: 988 VSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGDEVY 1167 +SG V +AR AASR++V+E+LAGG ALVEWRLETGRTHQIRAHAKY+ IPLLGDEVY Sbjct: 291 ISGPVKQGHARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVY 350 Query: 1168 GGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPPPSD 1347 G T + LSLLR +IP S ++ +LS L+RP LHALSLGF HP TG+++ FSCPPP D Sbjct: 351 GSTTGMALSLLRPRIPASFQNQLSSLLSGLERPCLHALSLGFTHPRTGKEINFSCPPPPD 410 Query: 1348 FSKVLSLLHRISRDK 1392 F+ VLS L + +K Sbjct: 411 FAGVLSQLREMDMEK 425 >KHG01344.1 hypothetical protein F383_22314 [Gossypium arboreum] Length = 446 Score = 468 bits (1204), Expect = e-157 Identities = 241/393 (61%), Positives = 295/393 (75%), Gaps = 3/393 (0%) Frame = +1 Query: 223 ATSTELVADEHKDKSWMERRNTNYGGIRLEETMEGP--GRSRLDAWISSRLP-VSRARVQ 393 ATS A +H++ + T+Y G++LEET++ G+ RLD+WISSR+ +SRARVQ Sbjct: 43 ATSISTSAAKHEEPT-----RTSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQ 97 Query: 394 SSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVN 573 SSI+ GLV VNGR V+KVS ++AGDKV C +S+L PL+AEPEDIPLDIV+ED HV+VVN Sbjct: 98 SSIKSGLVKVNGRVVDKVSHSLRAGDKVNCVISDLQPLKAEPEDIPLDIVFEDDHVLVVN 157 Query: 574 KPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPES 753 KP+HMVVHPAPGN NGTLVN IL+HC LP S + S Sbjct: 158 KPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSE---KEVLFDTEDMSDDEQDIFHGAS 214 Query: 754 SSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSA 933 + AASVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI RVY+SLT GVPS S+ Sbjct: 215 AGAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVPSASAG 274 Query: 934 RIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQ 1113 R+DIPI RD NNRIRMVAV G ++ AR AASR++V+EVLAGG ALV+WRLETGRTHQ Sbjct: 275 RVDIPIGRDSNNRIRMVAVPGLSHHGRARHAASRYKVIEVLAGGGSALVQWRLETGRTHQ 334 Query: 1114 IRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGF 1293 IRAHAKY+ IPLLGDEVYGGT N+ LSLLR + PP + ++ ++S L+RP LHAL LGF Sbjct: 335 IRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALVLGF 394 Query: 1294 KHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 +HP +GE ++FSCPPP DF ++L+ L +I +K Sbjct: 395 EHPHSGEKMRFSCPPPPDFGEILNHLRKIGIEK 427 >XP_017621288.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Gossypium arboreum] Length = 432 Score = 466 bits (1200), Expect = e-156 Identities = 240/393 (61%), Positives = 294/393 (74%), Gaps = 3/393 (0%) Frame = +1 Query: 223 ATSTELVADEHKDKSWMERRNTNYGGIRLEETMEGP--GRSRLDAWISSRLP-VSRARVQ 393 ATS A +H++ + T+Y G++LEET++ G+ RLD+WISSR+ +SRARVQ Sbjct: 43 ATSISTSAAKHEEPT-----RTSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQ 97 Query: 394 SSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVN 573 SSI+ GLV VNGR V+KVS ++AGDKV C +S+L PL+AEPEDIPLDIV+ED HV+VVN Sbjct: 98 SSIKSGLVKVNGRVVDKVSHSLRAGDKVNCVISDLQPLKAEPEDIPLDIVFEDDHVLVVN 157 Query: 574 KPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPES 753 KP+HMVVHPAPGN NGTLVN IL+HC LP S + S Sbjct: 158 KPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSE---KEVLFDTEDMSDDEQDIFHGAS 214 Query: 754 SSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSA 933 + AASVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI RVY+SLT GVPS S+ Sbjct: 215 AGAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVPSASAG 274 Query: 934 RIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQ 1113 R+DIPI RD NNRIRM AV G ++ AR AASR++V+EVLAGG ALV+WRLETGRTHQ Sbjct: 275 RVDIPIGRDSNNRIRMAAVPGLSHHGRARHAASRYKVIEVLAGGGSALVQWRLETGRTHQ 334 Query: 1114 IRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGF 1293 IRAHAKY+ IPLLGDEVYGGT N+ LSLLR + PP + ++ ++S L+RP LHAL LGF Sbjct: 335 IRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALVLGF 394 Query: 1294 KHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 +HP +GE ++FSCPPP DF ++L+ L +I +K Sbjct: 395 EHPHSGEKMRFSCPPPPDFGEILNHLRKIGIEK 427 >XP_016687702.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform X1 [Gossypium hirsutum] Length = 432 Score = 466 bits (1200), Expect = e-156 Identities = 242/393 (61%), Positives = 294/393 (74%), Gaps = 3/393 (0%) Frame = +1 Query: 223 ATSTELVADEHKDKSWMERRNTNYGGIRLEETMEGP--GRSRLDAWISSRLP-VSRARVQ 393 ATS A +H+ E T+Y G++LEET++ G+ RLD+WISSR+ +SRARVQ Sbjct: 43 ATSISTSATKHE-----EPIRTSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQ 97 Query: 394 SSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVN 573 SSI+ GLV VNGR V+KVS ++AGDKV C +S+L PL+AEPEDIPLDIV+ED HV+VVN Sbjct: 98 SSIKSGLVKVNGRVVDKVSHSLRAGDKVDCVISDLQPLKAEPEDIPLDIVFEDDHVLVVN 157 Query: 574 KPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPES 753 KP+HMVVHPAPGN NGTLVN IL+HC LP S + S Sbjct: 158 KPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSE---KEVLFDTQDMSDDEQDIFHGAS 214 Query: 754 SSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSA 933 + AASVRPGIVHRLDKGTSGLLVVAK+ +SHAHLSEQFK HTI RVY+SLT GVPS SS Sbjct: 215 AGAASVRPGIVHRLDKGTSGLLVVAKDEYSHAHLSEQFKQHTIQRVYISLTCGVPSASSG 274 Query: 934 RIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQ 1113 R+DIPI RD NNRIRMVAV G ++ AR AASR++V+EVLAGG ALV+WRLETGRTHQ Sbjct: 275 RVDIPIGRDSNNRIRMVAVPGLSHHGQARHAASRYKVIEVLAGGGSALVQWRLETGRTHQ 334 Query: 1114 IRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGF 1293 IRAHAKY+ IPLLGDEVYGGT N+ LSLLR + PP + ++ ++S L+RP LHAL LGF Sbjct: 335 IRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALVLGF 394 Query: 1294 KHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392 +HP +GE ++FSCPPP DF ++L+ L +I +K Sbjct: 395 EHPHSGEKMRFSCPPPPDFGEILNHLRKIGIEK 427 >XP_006473714.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1 [Citrus sinensis] Length = 421 Score = 466 bits (1198), Expect = e-156 Identities = 236/370 (63%), Positives = 281/370 (75%), Gaps = 2/370 (0%) Frame = +1 Query: 289 NYGGIRLEETMEGP-GRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQVIK 462 NY G++LEET++ G+ RLDAWISSR+ +SRARVQSSIR GLV +NG+ V KVS +K Sbjct: 54 NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVK 113 Query: 463 AGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNAIL 642 GD V CT+SEL PLRAE EDIPLDIVYED +V+VVNKPAHMVVHPAPGN GTLVN IL Sbjct: 114 GGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGIL 173 Query: 643 NHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLDKGTSGLLV 822 +HC LP S + S S AS+RPGIVHRLDKGTSGLLV Sbjct: 174 HHCSLPTLASSN------QEAFSDAEDISDDEEFSSSISGASIRPGIVHRLDKGTSGLLV 227 Query: 823 VAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIRMVAVSGSV 1002 VAK+ HSHAHLSEQFK HTI RVY+SLT+GVPS SS RI++PI+RDPNNRIRM A+ GS Sbjct: 228 VAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSN 287 Query: 1003 NNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGDEVYGGTNN 1182 + AR AASR++V+E+LAGG ALVEWRLETGRTHQIRAHAKY+ IPLLGDEVYGGT N Sbjct: 288 KHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKN 347 Query: 1183 LVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPPPSDFSKVL 1362 + SLL+ + P HG + +++S LQRP LHA++LGF HP T E ++FSCPPP+DF+++L Sbjct: 348 MAKSLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEIL 407 Query: 1363 SLLHRISRDK 1392 S L I +K Sbjct: 408 SQLREIGTEK 417