BLASTX nr result
ID: Alisma22_contig00011948
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00011948
(1986 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_020113503.1 RNA pseudouridine synthase 2, chloroplastic isofo... 484 e-163
XP_009382727.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 482 e-162
XP_003634352.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 480 e-161
XP_015887376.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 476 e-160
XP_018808134.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 474 e-159
XP_008445320.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158
XP_008445318.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158
XP_010241330.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158
XP_010241329.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158
OMO87357.1 hypothetical protein CCACVL1_09113 [Corchorus capsula... 471 e-158
XP_018731676.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158
XP_010241328.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 472 e-158
KCW70505.1 hypothetical protein EUGRSUZ_F03712 [Eucalyptus grandis] 472 e-158
XP_011649466.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 469 e-157
XP_011649465.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 469 e-157
XP_012078835.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 468 e-157
KHG01344.1 hypothetical protein F383_22314 [Gossypium arboreum] 468 e-157
XP_017621288.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 466 e-156
XP_016687702.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 466 e-156
XP_006473714.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 466 e-156
>XP_020113503.1 RNA pseudouridine synthase 2, chloroplastic isoform X1 [Ananas
comosus] OAY68405.1 RNA pseudouridine synthase 2,
chloroplastic [Ananas comosus]
Length = 430
Score = 484 bits (1245), Expect = e-163
Identities = 255/404 (63%), Positives = 307/404 (75%), Gaps = 11/404 (2%)
Frame = +1
Query: 205 LRFACAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VS 378
LR C++++ + D + R +++ G RLEE +E G GRSRLDAW++SR+ VS
Sbjct: 27 LRAMCSSSALD------PDPNPSPRLRSSHAGARLEEAVEVGSGRSRLDAWLASRIRGVS 80
Query: 379 RARVQSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSH 558
RAR+QSSIR GLV VNGRTV+KVS ++K GD + CTVSEL PLRAE EDIPLDIVYED H
Sbjct: 81 RARIQSSIRSGLVAVNGRTVDKVSHMVKGGDMISCTVSELQPLRAEAEDIPLDIVYEDEH 140
Query: 559 VIVVNKPAHMVVHPAPGNRNGTLVNAILNHCQLPV------ETHSTIFXXXXXXXXXXXX 720
V+VVNKPAHMVVHPAPGN NGTLVNAIL+HC+LP+ T S
Sbjct: 141 VLVVNKPAHMVVHPAPGNANGTLVNAILHHCRLPMVTCVNDSTMSESDESLDSSDEEIDV 200
Query: 721 XXXXAFSYPESS---SAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRV 891
FS E S A VRPGIVHRLDKGTSGLLVVAK+ HSHAHL+EQFK HTI+RV
Sbjct: 201 YHADQFSTEELSLEVPEALVRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQFKQHTINRV 260
Query: 892 YVSLTAGVPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGAC 1071
Y+SLT GVP+P SARI+IPIARDPNNR+RMVA+SGS N+++AR AASR+ V+EVLAGG
Sbjct: 261 YISLTTGVPNPYSARIEIPIARDPNNRVRMVAISGS-NHRHARYAASRYEVIEVLAGGGS 319
Query: 1072 ALVEWRLETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILS 1251
ALV+WRLETGRTHQIRAHAKYL +PLLGDEVYGGT ++ LSLL+ + P S HG+++ ++S
Sbjct: 320 ALVKWRLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMALSLLKPRTPSSHHGHLSHMIS 379
Query: 1252 NLQRPSLHALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRIS 1383
L RP LHALSLGF+HP TGE ++FSCPPP DFS+V+ L I+
Sbjct: 380 KLDRPCLHALSLGFEHPQTGEFLRFSCPPPDDFSEVVDQLRGIN 423
>XP_009382727.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Musa acuminata subsp. malaccensis] XP_009382728.1
PREDICTED: RNA pseudouridine synthase 2, chloroplastic
isoform X1 [Musa acuminata subsp. malaccensis]
Length = 440
Score = 482 bits (1241), Expect = e-162
Identities = 247/376 (65%), Positives = 290/376 (77%), Gaps = 11/376 (2%)
Frame = +1
Query: 289 NYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQVIK 462
N+ G+RLEE +E G ++R+D+WISSR+ VSRAR+QSSIR GLV VNGRTV KVS +IK
Sbjct: 59 NHAGVRLEERVEVGAEKTRIDSWISSRIRGVSRARIQSSIRSGLVAVNGRTVNKVSHIIK 118
Query: 463 AGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNAIL 642
GD V C +S+LLPL+AEPED+PLDIVYED HVIVVNKPAHMVVHPAPGN NGTLVNAIL
Sbjct: 119 GGDMVSCMISKLLPLKAEPEDMPLDIVYEDEHVIVVNKPAHMVVHPAPGNANGTLVNAIL 178
Query: 643 NHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSS---------AASVRPGIVHRL 795
+HC+LP+ + + SS A VRPGIVHRL
Sbjct: 179 HHCRLPIRAFANNIQISDTEECSESSDSDIEEVCADQSSMEEVGIENYEALVRPGIVHRL 238
Query: 796 DKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRI 975
DKGTSGLLVVAK+ HSHAHL+EQFK HTIHRVY+SLT+GVP+PS RI+IPIARD NNRI
Sbjct: 239 DKGTSGLLVVAKDDHSHAHLAEQFKKHTIHRVYMSLTSGVPNPSYGRIEIPIARDSNNRI 298
Query: 976 RMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLG 1155
RMVAVSG N+++AR AASR++V+E GG ALV+WRLETGRTHQIRAHAKYL IPLLG
Sbjct: 299 RMVAVSGLNNSRHARYAASRYKVIEDFMGGGAALVQWRLETGRTHQIRAHAKYLGIPLLG 358
Query: 1156 DEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCP 1335
DEVYGGT ++ LSLLR + PP+ HG+++ I+S LQRP LHA S+GFKHP TGE ++FSCP
Sbjct: 359 DEVYGGTKDMALSLLRPRTPPTYHGHLSNIISKLQRPCLHAFSIGFKHPHTGEFLQFSCP 418
Query: 1336 PPSDFSKVLSLLHRIS 1383
PP DFSKVL L IS
Sbjct: 419 PPDDFSKVLDQLRSIS 434
>XP_003634352.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Vitis vinifera] CBI18920.3 unnamed protein product,
partial [Vitis vinifera]
Length = 433
Score = 480 bits (1235), Expect = e-161
Identities = 243/378 (64%), Positives = 290/378 (76%), Gaps = 7/378 (1%)
Frame = +1
Query: 280 RNTNYGGIRLEETM----EGPGRSRLDAWISSRL-PVSRARVQSSIREGLVFVNGRTVEK 444
R TNY G+RLEET+ G+ RLD+WISSR+ +SRARVQSSIR GLV VN R V+K
Sbjct: 54 RRTNYAGVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDK 113
Query: 445 VSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGT 624
VS VI+AGDKV CT+SEL PLRAEPEDIPLDIVYED HV+VVNKPAHMVVHPAPGN +GT
Sbjct: 114 VSHVIRAGDKVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGT 173
Query: 625 LVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAA--SVRPGIVHRLD 798
LVN IL+HC LP + +F+ ++ ++RPGIVHRLD
Sbjct: 174 LVNGILHHCSLP----TVALPNRDSEEDDISDDEFNSFAAGQNCGTCETNIRPGIVHRLD 229
Query: 799 KGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIR 978
KGTSGLLVVAK+ HSHAHLSEQFK H+IHRVY+SLT+GVP+P S R++IP+ RDPNNRIR
Sbjct: 230 KGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIR 289
Query: 979 MVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGD 1158
M AV G N+ AR AASR++V+E+LA G ALVEWRLETGRTHQIRAHAKYL IPLLGD
Sbjct: 290 MTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGD 349
Query: 1159 EVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPP 1338
EVYGGT N+ LSLLR +IP S HG + +++S L RP LHA++LGF HP TG++V FSC P
Sbjct: 350 EVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQP 409
Query: 1339 PSDFSKVLSLLHRISRDK 1392
P DF+++LS L +IS +K
Sbjct: 410 PEDFAEILSWLRKISTEK 427
>XP_015887376.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Ziziphus
jujuba]
Length = 442
Score = 476 bits (1224), Expect = e-160
Identities = 243/392 (61%), Positives = 294/392 (75%), Gaps = 2/392 (0%)
Frame = +1
Query: 223 ATSTELVADEHKDKSWMERRNTNYGGIRLEETMEGPGRS-RLDAWISSRLP-VSRARVQS 396
+TST + + D++ RN NY G+RLEET+ R RLD+WISSR+ +SRARVQS
Sbjct: 51 STSTGVSISDGNDEALAGHRN-NYSGVRLEETVAVDSRKLRLDSWISSRVSGISRARVQS 109
Query: 397 SIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNK 576
SIR GLV VNGR V+KVS +KAGD+V CT+SEL PLRAEPE+IPLDIVYED HV+VVNK
Sbjct: 110 SIRSGLVSVNGRIVDKVSHNVKAGDRVNCTISELQPLRAEPENIPLDIVYEDDHVLVVNK 169
Query: 577 PAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESS 756
PAHMVVHPAPGN GTLVN IL+HC LP S + S+
Sbjct: 170 PAHMVVHPAPGNATGTLVNGILHHCSLPTVAFSNHDGLSDSEDNCDDGLGYFSVDQSSST 229
Query: 757 SAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSAR 936
ASVRPGIVHRLDKGTSGLLVVAKN SHAHLS+QFK HTIHRVY+SLT+GVPSP + R
Sbjct: 230 CQASVRPGIVHRLDKGTSGLLVVAKNELSHAHLSDQFKLHTIHRVYISLTSGVPSPLAGR 289
Query: 937 IDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQI 1116
+DIPI RD NNRIRM A+ G + +K R AASR++V+EVLAGG ALVEWRLETGRTHQI
Sbjct: 290 VDIPIGRDSNNRIRMTAIPGPIKSKQGRHAASRYKVIEVLAGGGSALVEWRLETGRTHQI 349
Query: 1117 RAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFK 1296
RAHAK+L IPLLGDE+YGGT ++ LSLL + P S HG +++++S +RP LHA++L FK
Sbjct: 350 RAHAKHLGIPLLGDELYGGTKSMALSLLWPRTPSSCHGQLSQLVSEFERPCLHAMALRFK 409
Query: 1297 HPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
HP TG+++ FSCPPPSDF+++L+ L + S K
Sbjct: 410 HPHTGKNIHFSCPPPSDFAEILNQLRKFSTAK 441
>XP_018808134.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Juglans regia]
Length = 446
Score = 474 bits (1221), Expect = e-159
Identities = 245/408 (60%), Positives = 302/408 (74%), Gaps = 10/408 (2%)
Frame = +1
Query: 199 ASLRFACAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP- 372
+SLR A+S+ + +DK + R N+GG++LE+T+ G+ RLD+WISSR+
Sbjct: 36 SSLRICFVASSSSGSTNSDEDKEDLAGRRANFGGVQLEDTVSLNSGKLRLDSWISSRIGG 95
Query: 373 VSRARVQSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYED 552
+SRARVQSSIR GLV VNGR V+KVS +K GDKV CT+SEL PLRA PEDIPLDIV+ED
Sbjct: 96 ISRARVQSSIRSGLVAVNGRVVDKVSHNVKTGDKVNCTISELQPLRAVPEDIPLDIVFED 155
Query: 553 SHVIVVNKPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXX 732
HV+VVNKPAHMVVHPAPGN GTLVN +L+HC PV S
Sbjct: 156 EHVLVVNKPAHMVVHPAPGNATGTLVNGVLHHCSPPVVAFSN--EEVLSDAEDISDDELS 213
Query: 733 AFSYPES--------SSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHR 888
+FS ++ S AS+RPGIVHRLDKGTSGLLVVAK+ HSHA+LSEQFK HTI R
Sbjct: 214 SFSAGQNPNDGLYSRRSGASIRPGIVHRLDKGTSGLLVVAKDEHSHANLSEQFKLHTIQR 273
Query: 889 VYVSLTAGVPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGA 1068
+YVSLT+GVPSP + R+++PI RD NNRIRM A+ GS ++ AR AASR++V+E+LAGG+
Sbjct: 274 LYVSLTSGVPSPMAGRVEVPIGRDLNNRIRMAAIPGSNISRQARHAASRYKVIEILAGGS 333
Query: 1069 CALVEWRLETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEIL 1248
ALVEWRLETGRTHQIRAHAKYL IPLLGDEVYGGT ++ LSLLR + PPSRHG + +++
Sbjct: 334 SALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLRPRTPPSRHGQLLQLV 393
Query: 1249 SNLQRPSLHALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
S L+RP LHAL+LGF HP T E+V F CPPP+DF+++L L +I K
Sbjct: 394 SRLERPCLHALALGFMHPHTMENVYFQCPPPADFAEILGQLRKIGTVK 441
>XP_008445320.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Cucumis melo]
Length = 429
Score = 472 bits (1214), Expect = e-158
Identities = 243/398 (61%), Positives = 296/398 (74%), Gaps = 2/398 (0%)
Frame = +1
Query: 205 LRFACAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VS 378
LRF+ +S DE+ + R NY G RLEET++ PG+ RLD+WISSR+ +S
Sbjct: 33 LRFSANFSSRCSDYDEYSEAQ--SERIANYAGTRLEETVDINPGKVRLDSWISSRINGIS 90
Query: 379 RARVQSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSH 558
RARVQSSIR GLV VNGR ++KVS +KAGD + CT+SEL PLRAEPEDI LDIVYED H
Sbjct: 91 RARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEH 150
Query: 559 VIVVNKPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAF 738
V+VVNKPAHMVVHPAPGN GTLVNAILNHC LP+ + ST F
Sbjct: 151 VLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVSTSTGEHQSDSDVSDDEFSSIEVF 210
Query: 739 SYPESSSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVP 918
S S A +RPGIVHRLDKGTSGLLVVAK+ HSHAHLS QFK H+I RVY+SLT GVP
Sbjct: 211 S---RVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP 267
Query: 919 SPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLET 1098
++ RI+IPI RDPNNRIRM A G+ NN +A+ AASR+ V+E+LA G +LVEWRLET
Sbjct: 268 PSTAGRIEIPICRDPNNRIRMTATHGTKNNPHAKHAASRYNVMEILAQGGSSLVEWRLET 327
Query: 1099 GRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHA 1278
GRTHQIRAHAKY+ IPLLGDEVYGGT ++ +SLLRT+ + HG + +++S+L+RP LHA
Sbjct: 328 GRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHA 387
Query: 1279 LSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
L+LGF HP TG++++FSCPPP+DF+++LS L I K
Sbjct: 388 LTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKK 425
>XP_008445318.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Cucumis melo] XP_008445319.1 PREDICTED: RNA
pseudouridine synthase 2, chloroplastic isoform X1
[Cucumis melo]
Length = 431
Score = 472 bits (1214), Expect = e-158
Identities = 243/398 (61%), Positives = 296/398 (74%), Gaps = 2/398 (0%)
Frame = +1
Query: 205 LRFACAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VS 378
LRF+ +S DE+ + R NY G RLEET++ PG+ RLD+WISSR+ +S
Sbjct: 33 LRFSANFSSRCSDYDEYSEAQ--SERIANYAGTRLEETVDINPGKVRLDSWISSRINGIS 90
Query: 379 RARVQSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSH 558
RARVQSSIR GLV VNGR ++KVS +KAGD + CT+SEL PLRAEPEDI LDIVYED H
Sbjct: 91 RARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEH 150
Query: 559 VIVVNKPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAF 738
V+VVNKPAHMVVHPAPGN GTLVNAILNHC LP+ + ST F
Sbjct: 151 VLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVSTSTGEHQSDSDVSDDEFSSIEVF 210
Query: 739 SYPESSSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVP 918
S S A +RPGIVHRLDKGTSGLLVVAK+ HSHAHLS QFK H+I RVY+SLT GVP
Sbjct: 211 S---RVSEAPIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVP 267
Query: 919 SPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLET 1098
++ RI+IPI RDPNNRIRM A G+ NN +A+ AASR+ V+E+LA G +LVEWRLET
Sbjct: 268 PSTAGRIEIPICRDPNNRIRMTATHGTKNNPHAKHAASRYNVMEILAQGGSSLVEWRLET 327
Query: 1099 GRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHA 1278
GRTHQIRAHAKY+ IPLLGDEVYGGT ++ +SLLRT+ + HG + +++S+L+RP LHA
Sbjct: 328 GRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHA 387
Query: 1279 LSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
L+LGF HP TG++++FSCPPP+DF+++LS L I K
Sbjct: 388 LTLGFVHPHTGKNIRFSCPPPTDFAEILSQLREIGTKK 425
>XP_010241330.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Nelumbo nucifera]
Length = 443
Score = 472 bits (1215), Expect = e-158
Identities = 248/400 (62%), Positives = 302/400 (75%), Gaps = 8/400 (2%)
Frame = +1
Query: 217 CAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARV 390
C+ +ST A +++ RR N+ G+ LE+T+E +SR+D+WISSR+P +SRARV
Sbjct: 41 CSFSSTGESASDYQSSEPQNRRG-NFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARV 99
Query: 391 QSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVV 570
QSSI+ GLV VNGR ++KVS VI+AGDKV CT+ EL PLRAEPEDIPLDIVYED V+VV
Sbjct: 100 QSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVV 159
Query: 571 NKPAHMVVHPAPGNRNGTLVNAILNHCQLPVE--THSTIFXXXXXXXXXXXXXXXXAFSY 744
NKPAHMVVHPAPGN NGTLVN IL+HC LP+ T+S +
Sbjct: 160 NKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGS 219
Query: 745 PESSSA----ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAG 912
E ++ SVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI+R+Y+SLT G
Sbjct: 220 MEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCG 279
Query: 913 VPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRL 1092
VPS +S RI++PI RD +NRIRM AV +++ AR AASR+RV+EVLAGG ALVEWRL
Sbjct: 280 VPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRL 339
Query: 1093 ETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSL 1272
ETGRTHQIRAHAKYL IPLLGDEVYGGT N+ LSLLRT+ S HG +++++S LQRP L
Sbjct: 340 ETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCL 399
Query: 1273 HALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
HA +LGFKHP TGE+++FSCPPP+DF++VLS L I +K
Sbjct: 400 HAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSIGIEK 439
>XP_010241329.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Nelumbo nucifera]
Length = 453
Score = 472 bits (1215), Expect = e-158
Identities = 248/400 (62%), Positives = 302/400 (75%), Gaps = 8/400 (2%)
Frame = +1
Query: 217 CAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARV 390
C+ +ST A +++ RR N+ G+ LE+T+E +SR+D+WISSR+P +SRARV
Sbjct: 41 CSFSSTGESASDYQSSEPQNRRG-NFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARV 99
Query: 391 QSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVV 570
QSSI+ GLV VNGR ++KVS VI+AGDKV CT+ EL PLRAEPEDIPLDIVYED V+VV
Sbjct: 100 QSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVV 159
Query: 571 NKPAHMVVHPAPGNRNGTLVNAILNHCQLPVE--THSTIFXXXXXXXXXXXXXXXXAFSY 744
NKPAHMVVHPAPGN NGTLVN IL+HC LP+ T+S +
Sbjct: 160 NKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGS 219
Query: 745 PESSSA----ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAG 912
E ++ SVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI+R+Y+SLT G
Sbjct: 220 MEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCG 279
Query: 913 VPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRL 1092
VPS +S RI++PI RD +NRIRM AV +++ AR AASR+RV+EVLAGG ALVEWRL
Sbjct: 280 VPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRL 339
Query: 1093 ETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSL 1272
ETGRTHQIRAHAKYL IPLLGDEVYGGT N+ LSLLRT+ S HG +++++S LQRP L
Sbjct: 340 ETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCL 399
Query: 1273 HALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
HA +LGFKHP TGE+++FSCPPP+DF++VLS L I +K
Sbjct: 400 HAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSIGIEK 439
>OMO87357.1 hypothetical protein CCACVL1_09113 [Corchorus capsularis]
Length = 432
Score = 471 bits (1212), Expect = e-158
Identities = 242/377 (64%), Positives = 289/377 (76%), Gaps = 3/377 (0%)
Frame = +1
Query: 286 TNYGGIRLEETMEGP--GRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQV 456
T+Y G++LEET++ G+ RLD+WISSR+ +SRARVQSSI+ GLV VNGR V+KVS
Sbjct: 61 TSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHG 120
Query: 457 IKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNA 636
++AGDKV C +SEL PLRAEPEDIPLDIVYED HV+VVNKP HMVVHPAPGN GTLVN
Sbjct: 121 LRAGDKVNCVISELQPLRAEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNG 180
Query: 637 ILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLDKGTSGL 816
IL+HC LP S F Y E+++AA +RPGIVHRLDKGTSGL
Sbjct: 181 ILHHCSLPTVALSE----KELLSDTEDGSDDEGFPYGENAAAA-IRPGIVHRLDKGTSGL 235
Query: 817 LVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIRMVAVSG 996
LVVAK+ HSHAHLSEQFK HTI RVY+SLT GVPSPS+ R+DIPI RD NNR+RMVAV G
Sbjct: 236 LVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDIPIGRDSNNRVRMVAVPG 295
Query: 997 SVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGDEVYGGT 1176
+ AR AASR++V+EVLAGG ALV+WRLETGRTHQIRAHAKY+ IPLLGDEVYGGT
Sbjct: 296 ISHPGRARHAASRYKVIEVLAGGGSALVQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGT 355
Query: 1177 NNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPPPSDFSK 1356
N+VLSLLR + PPS + ++ ++S L+RP LHAL LGF+HP + E++ FSCPPP DF+
Sbjct: 356 KNMVLSLLRPRTPPSYNDQLSRLVSRLERPYLHALVLGFQHPQSSENMHFSCPPPPDFTG 415
Query: 1357 VLSLLHRISRDK*YLME 1407
+LS L +I +K L E
Sbjct: 416 ILSQLRKIGVEKPILKE 432
>XP_018731676.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Eucalyptus
grandis]
Length = 453
Score = 472 bits (1214), Expect = e-158
Identities = 245/378 (64%), Positives = 285/378 (75%), Gaps = 9/378 (2%)
Frame = +1
Query: 286 TNYGGIRLEETMEG--PGRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQV 456
+ Y G+RL ET++ PG+ RLDAWISSR+ VSRARVQSSIR GLV VNGR V+KVS
Sbjct: 72 SGYAGVRLRETVDAAKPGKLRLDAWISSRIQGVSRARVQSSIRSGLVSVNGRVVDKVSHN 131
Query: 457 IKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNA 636
++AGD V CT+SEL PLRAEPEDIP+DIVYED HV+VVNKPAHMVVHPAPGN +GTLVNA
Sbjct: 132 VRAGDMVDCTISELQPLRAEPEDIPVDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNA 191
Query: 637 ILNHCQLP------VETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLD 798
IL+HC LP E S + S S SVRPGIVHRLD
Sbjct: 192 ILHHCSLPTVAFSETELLSEGEDVSDDESSSSTACETSTKGFNSSESGGSVRPGIVHRLD 251
Query: 799 KGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIR 978
KGTSGLLVVAKN SHAHLSEQFK HTI RVYVSLT GVPS +S RI++PI RD NNRIR
Sbjct: 252 KGTSGLLVVAKNERSHAHLSEQFKMHTIRRVYVSLTNGVPSATSGRIEVPIGRDTNNRIR 311
Query: 979 MVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGD 1158
M A+ G N + AR AASR++V+EVLAGG+ ALVEWRLETGRTHQIRAHAKY+ IPLLGD
Sbjct: 312 MSAIPGPSNGRQARYAASRYKVIEVLAGGSSALVEWRLETGRTHQIRAHAKYVGIPLLGD 371
Query: 1159 EVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPP 1338
EVYGGT N++LSLL+ K+P R ++E++S L+RP LHA+SLGF HP TGE+V+FSC P
Sbjct: 372 EVYGGTKNMILSLLQAKLPIGRQSQLSELVSKLERPCLHAVSLGFIHPYTGENVQFSCQP 431
Query: 1339 PSDFSKVLSLLHRISRDK 1392
P DFS++L L R+ K
Sbjct: 432 PEDFSEILCQLRRLGMKK 449
>XP_010241328.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Nelumbo nucifera]
Length = 471
Score = 472 bits (1215), Expect = e-158
Identities = 248/400 (62%), Positives = 302/400 (75%), Gaps = 8/400 (2%)
Frame = +1
Query: 217 CAATSTELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARV 390
C+ +ST A +++ RR N+ G+ LE+T+E +SR+D+WISSR+P +SRARV
Sbjct: 41 CSFSSTGESASDYQSSEPQNRRG-NFAGVCLEDTVEISSVKSRIDSWISSRIPGISRARV 99
Query: 391 QSSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVV 570
QSSI+ GLV VNGR ++KVS VI+AGDKV CT+ EL PLRAEPEDIPLDIVYED V+VV
Sbjct: 100 QSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKELQPLRAEPEDIPLDIVYEDESVLVV 159
Query: 571 NKPAHMVVHPAPGNRNGTLVNAILNHCQLPVE--THSTIFXXXXXXXXXXXXXXXXAFSY 744
NKPAHMVVHPAPGN NGTLVN IL+HC LP+ T+S +
Sbjct: 160 NKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTNSKVLSETDDISDDESDIFSSTQGS 219
Query: 745 PESSSA----ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAG 912
E ++ SVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI+R+Y+SLT G
Sbjct: 220 MEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTINRIYLSLTCG 279
Query: 913 VPSPSSARIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRL 1092
VPS +S RI++PI RD +NRIRM AV +++ AR AASR+RV+EVLAGG ALVEWRL
Sbjct: 280 VPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQARHAASRYRVVEVLAGGGSALVEWRL 339
Query: 1093 ETGRTHQIRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSL 1272
ETGRTHQIRAHAKYL IPLLGDEVYGGT N+ LSLLRT+ S HG +++++S LQRP L
Sbjct: 340 ETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLLRTRSHSSFHGDLSQLVSKLQRPCL 399
Query: 1273 HALSLGFKHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
HA +LGFKHP TGE+++FSCPPP+DF++VLS L I +K
Sbjct: 400 HAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSIGIEK 439
>KCW70505.1 hypothetical protein EUGRSUZ_F03712 [Eucalyptus grandis]
Length = 462
Score = 472 bits (1214), Expect = e-158
Identities = 245/378 (64%), Positives = 285/378 (75%), Gaps = 9/378 (2%)
Frame = +1
Query: 286 TNYGGIRLEETMEG--PGRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQV 456
+ Y G+RL ET++ PG+ RLDAWISSR+ VSRARVQSSIR GLV VNGR V+KVS
Sbjct: 65 SGYAGVRLRETVDAAKPGKLRLDAWISSRIQGVSRARVQSSIRSGLVSVNGRVVDKVSHN 124
Query: 457 IKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNA 636
++AGD V CT+SEL PLRAEPEDIP+DIVYED HV+VVNKPAHMVVHPAPGN +GTLVNA
Sbjct: 125 VRAGDMVDCTISELQPLRAEPEDIPVDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNA 184
Query: 637 ILNHCQLP------VETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLD 798
IL+HC LP E S + S S SVRPGIVHRLD
Sbjct: 185 ILHHCSLPTVAFSETELLSEGEDVSDDESSSSTACETSTKGFNSSESGGSVRPGIVHRLD 244
Query: 799 KGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIR 978
KGTSGLLVVAKN SHAHLSEQFK HTI RVYVSLT GVPS +S RI++PI RD NNRIR
Sbjct: 245 KGTSGLLVVAKNERSHAHLSEQFKMHTIRRVYVSLTNGVPSATSGRIEVPIGRDTNNRIR 304
Query: 979 MVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGD 1158
M A+ G N + AR AASR++V+EVLAGG+ ALVEWRLETGRTHQIRAHAKY+ IPLLGD
Sbjct: 305 MSAIPGPSNGRQARYAASRYKVIEVLAGGSSALVEWRLETGRTHQIRAHAKYVGIPLLGD 364
Query: 1159 EVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPP 1338
EVYGGT N++LSLL+ K+P R ++E++S L+RP LHA+SLGF HP TGE+V+FSC P
Sbjct: 365 EVYGGTKNMILSLLQAKLPIGRQSQLSELVSKLERPCLHAVSLGFIHPYTGENVQFSCQP 424
Query: 1339 PSDFSKVLSLLHRISRDK 1392
P DFS++L L R+ K
Sbjct: 425 PEDFSEILCQLRRLGMKK 442
>XP_011649466.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Cucumis sativus]
Length = 430
Score = 469 bits (1207), Expect = e-157
Identities = 238/390 (61%), Positives = 290/390 (74%), Gaps = 2/390 (0%)
Frame = +1
Query: 229 STELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARVQSSI 402
ST +D + R NY G RLEET++ PG+ RLD+WIS R+ +SRARVQSSI
Sbjct: 40 STRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSI 99
Query: 403 REGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPA 582
R GLV VNGR ++KVS +KAGD + CT+SEL PLRAEPEDI LDIVYED HV+VVNKPA
Sbjct: 100 RAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPA 159
Query: 583 HMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSA 762
HMVVHPAPGN GTLVNAILNHC LP+ ST FS S
Sbjct: 160 HMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFS---RVSE 216
Query: 763 ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARID 942
A +RPGIVHRLDKGTSGLLVVAK+ HSHAHLS QFK H+I RVY+SLT GVP ++ RI+
Sbjct: 217 APIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE 276
Query: 943 IPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRA 1122
+PI RDPNNRIRM A+ G+ NN +A+ AASR+ V+E+LA G +LVEWRLETGRTHQIRA
Sbjct: 277 MPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRA 336
Query: 1123 HAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHP 1302
HAKY+ IPLLGDEVYGGT ++ +SLLRT+ + HG + +++S+L+RP LHAL+LGF HP
Sbjct: 337 HAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHP 396
Query: 1303 DTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
TG++++FSCPPP+DF+++LS L I K
Sbjct: 397 HTGKNIRFSCPPPTDFTEILSQLREIGTQK 426
>XP_011649465.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Cucumis sativus] KGN62268.1 hypothetical protein
Csa_2G346580 [Cucumis sativus]
Length = 432
Score = 469 bits (1207), Expect = e-157
Identities = 238/390 (61%), Positives = 290/390 (74%), Gaps = 2/390 (0%)
Frame = +1
Query: 229 STELVADEHKDKSWMERRNTNYGGIRLEETME-GPGRSRLDAWISSRLP-VSRARVQSSI 402
ST +D + R NY G RLEET++ PG+ RLD+WIS R+ +SRARVQSSI
Sbjct: 40 STRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSWISCRINGISRARVQSSI 99
Query: 403 REGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPA 582
R GLV VNGR ++KVS +KAGD + CT+SEL PLRAEPEDI LDIVYED HV+VVNKPA
Sbjct: 100 RAGLVSVNGRVIDKVSHNVKAGDVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPA 159
Query: 583 HMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSA 762
HMVVHPAPGN GTLVNAILNHC LP+ ST FS S
Sbjct: 160 HMVVHPAPGNATGTLVNAILNHCSLPMVATSTGENESDSDVSDDEFSSIGVFS---RVSE 216
Query: 763 ASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARID 942
A +RPGIVHRLDKGTSGLLVVAK+ HSHAHLS QFK H+I RVY+SLT GVP ++ RI+
Sbjct: 217 APIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIE 276
Query: 943 IPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRA 1122
+PI RDPNNRIRM A+ G+ NN +A+ AASR+ V+E+LA G +LVEWRLETGRTHQIRA
Sbjct: 277 MPICRDPNNRIRMTAIDGTKNNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQIRA 336
Query: 1123 HAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHP 1302
HAKY+ IPLLGDEVYGGT ++ +SLLRT+ + HG + +++S+L+RP LHAL+LGF HP
Sbjct: 337 HAKYMGIPLLGDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHP 396
Query: 1303 DTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
TG++++FSCPPP+DF+++LS L I K
Sbjct: 397 HTGKNIRFSCPPPTDFTEILSQLREIGTQK 426
>XP_012078835.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Jatropha
curcas] XP_012078836.1 PREDICTED: RNA pseudouridine
synthase 2, chloroplastic [Jatropha curcas]
Length = 426
Score = 468 bits (1203), Expect = e-157
Identities = 239/375 (63%), Positives = 281/375 (74%), Gaps = 2/375 (0%)
Frame = +1
Query: 274 ERRNTNYGGIRLEETMEGP-GRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKV 447
+ + NY G+RLEET+E G+ RLD+WISSR+ +SRARVQSSI+ GLV VNGR V+KV
Sbjct: 57 QNQRINYAGLRLEETVEAKSGKLRLDSWISSRISGISRARVQSSIKSGLVAVNGRVVDKV 116
Query: 448 SQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTL 627
S +K GDKVICT+SEL PLRAE EDIPLDI+YED H++VVNKP HMVVHPAPGN GTL
Sbjct: 117 SHSVKVGDKVICTISELQPLRAEAEDIPLDIIYEDDHLLVVNKPPHMVVHPAPGNPTGTL 176
Query: 628 VNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLDKGT 807
VN IL+HC LP S+ SS +SVRPGIVHRLDKGT
Sbjct: 177 VNGILHHCSLPTVVTSSQEVLSDVEDISDDEGSC------SSSCVSSVRPGIVHRLDKGT 230
Query: 808 SGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIRMVA 987
SGLLVVAK+ H+HAHLSEQFK HTI RVY+SLT+GVPS + RIDIPI RD NNRIRM A
Sbjct: 231 SGLLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVPSALTGRIDIPIGRDVNNRIRMAA 290
Query: 988 VSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGDEVY 1167
+SG V +AR AASR++V+E+LAGG ALVEWRLETGRTHQIRAHAKY+ IPLLGDEVY
Sbjct: 291 ISGPVKQGHARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVY 350
Query: 1168 GGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPPPSD 1347
G T + LSLLR +IP S ++ +LS L+RP LHALSLGF HP TG+++ FSCPPP D
Sbjct: 351 GSTTGMALSLLRPRIPASFQNQLSSLLSGLERPCLHALSLGFTHPRTGKEINFSCPPPPD 410
Query: 1348 FSKVLSLLHRISRDK 1392
F+ VLS L + +K
Sbjct: 411 FAGVLSQLREMDMEK 425
>KHG01344.1 hypothetical protein F383_22314 [Gossypium arboreum]
Length = 446
Score = 468 bits (1204), Expect = e-157
Identities = 241/393 (61%), Positives = 295/393 (75%), Gaps = 3/393 (0%)
Frame = +1
Query: 223 ATSTELVADEHKDKSWMERRNTNYGGIRLEETMEGP--GRSRLDAWISSRLP-VSRARVQ 393
ATS A +H++ + T+Y G++LEET++ G+ RLD+WISSR+ +SRARVQ
Sbjct: 43 ATSISTSAAKHEEPT-----RTSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQ 97
Query: 394 SSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVN 573
SSI+ GLV VNGR V+KVS ++AGDKV C +S+L PL+AEPEDIPLDIV+ED HV+VVN
Sbjct: 98 SSIKSGLVKVNGRVVDKVSHSLRAGDKVNCVISDLQPLKAEPEDIPLDIVFEDDHVLVVN 157
Query: 574 KPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPES 753
KP+HMVVHPAPGN NGTLVN IL+HC LP S + S
Sbjct: 158 KPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSE---KEVLFDTEDMSDDEQDIFHGAS 214
Query: 754 SSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSA 933
+ AASVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI RVY+SLT GVPS S+
Sbjct: 215 AGAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVPSASAG 274
Query: 934 RIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQ 1113
R+DIPI RD NNRIRMVAV G ++ AR AASR++V+EVLAGG ALV+WRLETGRTHQ
Sbjct: 275 RVDIPIGRDSNNRIRMVAVPGLSHHGRARHAASRYKVIEVLAGGGSALVQWRLETGRTHQ 334
Query: 1114 IRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGF 1293
IRAHAKY+ IPLLGDEVYGGT N+ LSLLR + PP + ++ ++S L+RP LHAL LGF
Sbjct: 335 IRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALVLGF 394
Query: 1294 KHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
+HP +GE ++FSCPPP DF ++L+ L +I +K
Sbjct: 395 EHPHSGEKMRFSCPPPPDFGEILNHLRKIGIEK 427
>XP_017621288.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Gossypium arboreum]
Length = 432
Score = 466 bits (1200), Expect = e-156
Identities = 240/393 (61%), Positives = 294/393 (74%), Gaps = 3/393 (0%)
Frame = +1
Query: 223 ATSTELVADEHKDKSWMERRNTNYGGIRLEETMEGP--GRSRLDAWISSRLP-VSRARVQ 393
ATS A +H++ + T+Y G++LEET++ G+ RLD+WISSR+ +SRARVQ
Sbjct: 43 ATSISTSAAKHEEPT-----RTSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQ 97
Query: 394 SSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVN 573
SSI+ GLV VNGR V+KVS ++AGDKV C +S+L PL+AEPEDIPLDIV+ED HV+VVN
Sbjct: 98 SSIKSGLVKVNGRVVDKVSHSLRAGDKVNCVISDLQPLKAEPEDIPLDIVFEDDHVLVVN 157
Query: 574 KPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPES 753
KP+HMVVHPAPGN NGTLVN IL+HC LP S + S
Sbjct: 158 KPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSE---KEVLFDTEDMSDDEQDIFHGAS 214
Query: 754 SSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSA 933
+ AASVRPGIVHRLDKGTSGLLVVAK+ HSHAHLSEQFK HTI RVY+SLT GVPS S+
Sbjct: 215 AGAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVPSASAG 274
Query: 934 RIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQ 1113
R+DIPI RD NNRIRM AV G ++ AR AASR++V+EVLAGG ALV+WRLETGRTHQ
Sbjct: 275 RVDIPIGRDSNNRIRMAAVPGLSHHGRARHAASRYKVIEVLAGGGSALVQWRLETGRTHQ 334
Query: 1114 IRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGF 1293
IRAHAKY+ IPLLGDEVYGGT N+ LSLLR + PP + ++ ++S L+RP LHAL LGF
Sbjct: 335 IRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALVLGF 394
Query: 1294 KHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
+HP +GE ++FSCPPP DF ++L+ L +I +K
Sbjct: 395 EHPHSGEKMRFSCPPPPDFGEILNHLRKIGIEK 427
>XP_016687702.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
X1 [Gossypium hirsutum]
Length = 432
Score = 466 bits (1200), Expect = e-156
Identities = 242/393 (61%), Positives = 294/393 (74%), Gaps = 3/393 (0%)
Frame = +1
Query: 223 ATSTELVADEHKDKSWMERRNTNYGGIRLEETMEGP--GRSRLDAWISSRLP-VSRARVQ 393
ATS A +H+ E T+Y G++LEET++ G+ RLD+WISSR+ +SRARVQ
Sbjct: 43 ATSISTSATKHE-----EPIRTSYAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQ 97
Query: 394 SSIREGLVFVNGRTVEKVSQVIKAGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVN 573
SSI+ GLV VNGR V+KVS ++AGDKV C +S+L PL+AEPEDIPLDIV+ED HV+VVN
Sbjct: 98 SSIKSGLVKVNGRVVDKVSHSLRAGDKVDCVISDLQPLKAEPEDIPLDIVFEDDHVLVVN 157
Query: 574 KPAHMVVHPAPGNRNGTLVNAILNHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPES 753
KP+HMVVHPAPGN NGTLVN IL+HC LP S + S
Sbjct: 158 KPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSE---KEVLFDTQDMSDDEQDIFHGAS 214
Query: 754 SSAASVRPGIVHRLDKGTSGLLVVAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSA 933
+ AASVRPGIVHRLDKGTSGLLVVAK+ +SHAHLSEQFK HTI RVY+SLT GVPS SS
Sbjct: 215 AGAASVRPGIVHRLDKGTSGLLVVAKDEYSHAHLSEQFKQHTIQRVYISLTCGVPSASSG 274
Query: 934 RIDIPIARDPNNRIRMVAVSGSVNNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQ 1113
R+DIPI RD NNRIRMVAV G ++ AR AASR++V+EVLAGG ALV+WRLETGRTHQ
Sbjct: 275 RVDIPIGRDSNNRIRMVAVPGLSHHGQARHAASRYKVIEVLAGGGSALVQWRLETGRTHQ 334
Query: 1114 IRAHAKYLRIPLLGDEVYGGTNNLVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGF 1293
IRAHAKY+ IPLLGDEVYGGT N+ LSLLR + PP + ++ ++S L+RP LHAL LGF
Sbjct: 335 IRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALVLGF 394
Query: 1294 KHPDTGEDVKFSCPPPSDFSKVLSLLHRISRDK 1392
+HP +GE ++FSCPPP DF ++L+ L +I +K
Sbjct: 395 EHPHSGEKMRFSCPPPPDFGEILNHLRKIGIEK 427
>XP_006473714.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Citrus sinensis]
Length = 421
Score = 466 bits (1198), Expect = e-156
Identities = 236/370 (63%), Positives = 281/370 (75%), Gaps = 2/370 (0%)
Frame = +1
Query: 289 NYGGIRLEETMEGP-GRSRLDAWISSRLP-VSRARVQSSIREGLVFVNGRTVEKVSQVIK 462
NY G++LEET++ G+ RLDAWISSR+ +SRARVQSSIR GLV +NG+ V KVS +K
Sbjct: 54 NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVK 113
Query: 463 AGDKVICTVSELLPLRAEPEDIPLDIVYEDSHVIVVNKPAHMVVHPAPGNRNGTLVNAIL 642
GD V CT+SEL PLRAE EDIPLDIVYED +V+VVNKPAHMVVHPAPGN GTLVN IL
Sbjct: 114 GGDMVNCTISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGIL 173
Query: 643 NHCQLPVETHSTIFXXXXXXXXXXXXXXXXAFSYPESSSAASVRPGIVHRLDKGTSGLLV 822
+HC LP S + S S AS+RPGIVHRLDKGTSGLLV
Sbjct: 174 HHCSLPTLASSN------QEAFSDAEDISDDEEFSSSISGASIRPGIVHRLDKGTSGLLV 227
Query: 823 VAKNGHSHAHLSEQFKHHTIHRVYVSLTAGVPSPSSARIDIPIARDPNNRIRMVAVSGSV 1002
VAK+ HSHAHLSEQFK HTI RVY+SLT+GVPS SS RI++PI+RDPNNRIRM A+ GS
Sbjct: 228 VAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSN 287
Query: 1003 NNKNARRAASRFRVLEVLAGGACALVEWRLETGRTHQIRAHAKYLRIPLLGDEVYGGTNN 1182
+ AR AASR++V+E+LAGG ALVEWRLETGRTHQIRAHAKY+ IPLLGDEVYGGT N
Sbjct: 288 KHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKN 347
Query: 1183 LVLSLLRTKIPPSRHGYITEILSNLQRPSLHALSLGFKHPDTGEDVKFSCPPPSDFSKVL 1362
+ SLL+ + P HG + +++S LQRP LHA++LGF HP T E ++FSCPPP+DF+++L
Sbjct: 348 MAKSLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEIL 407
Query: 1363 SLLHRISRDK 1392
S L I +K
Sbjct: 408 SQLREIGTEK 417