BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00010675
         (5681 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN...   530   e-159
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t...   508   e-151
AAK29467.1 polyprotein-like [Solanum chilense]                        501   e-149
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN...   408   e-121
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]             422   e-120
KYP60296.1 Retrovirus-related Pol polyprotein from transposon TN...   410   e-118
CAN66323.1 hypothetical protein VITISV_007384 [Vitis vinifera]        380   e-105
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro...   371   e-103
KYP68607.1 Retrovirus-related Pol polyprotein from transposon TN...   349   4e-98
CAN71109.1 hypothetical protein VITISV_001479 [Vitis vinifera]        353   4e-97
CAN66898.1 hypothetical protein VITISV_037436 [Vitis vinifera]        352   9e-97
CAN69340.1 hypothetical protein VITISV_032634 [Vitis vinifera]        350   4e-96
KYP40337.1 Retrovirus-related Pol polyprotein from transposon TN...   346   4e-96
CAN74198.1 hypothetical protein VITISV_005765 [Vitis vinifera]        347   3e-95
CAN61435.1 hypothetical protein VITISV_033767 [Vitis vinifera]        346   7e-95
CAN63196.1 hypothetical protein VITISV_035792 [Vitis vinifera]        345   2e-94
CAN61548.1 hypothetical protein VITISV_043524 [Vitis vinifera]        348   7e-94
CAN67882.1 hypothetical protein VITISV_022356 [Vitis vinifera]        341   2e-93
KYP59064.1 Retrovirus-related Pol polyprotein from transposon TN...   335   9e-93
KYP32301.1 Retrovirus-related Pol polyprotein from transposon TN...   335   9e-93

>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score =  530 bits (1366), Expect(3) = e-159
 Identities = 290/623 (46%), Positives = 388/623 (62%), Gaps = 4/623 (0%)
 Frame = +2

Query: 3824 EGRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCY 4003
            +G    VNMGN S S+ + IG+I++QT VGCTL LKDVRH+ D++L+LI  +  ++EG  
Sbjct: 309  KGDFGHVNMGNKSTSQIVGIGDIHLQTGVGCTLILKDVRHIPDIRLNLISVNVLDKEGYE 368

Query: 4004 LDFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAALWHRRLGHMSEK 4183
                GG+ K+TKG+LV+ +GKL  TLYKT +KV KG   +V  D    LWHRRL H+SEK
Sbjct: 369  HSMKGGRWKLTKGSLVVAKGKLCCTLYKTYVKVCKGQLNAVENDASPNLWHRRLAHISEK 428

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSFKTRSKVKPDVLQLIHSDICVPFEVA 4363
            G QLL K+ LI   K   L+ CD C  GK  +VSFK  S  K + L+L+HSD+C P EV 
Sbjct: 429  GLQLLAKQSLIPQAKGDFLNPCDYCVFGKHHRVSFKKSSNRKKNKLELVHSDVCGPMEVE 488

Query: 4364 SLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEY 4543
            SLGGN+YFVTFIDD SRK W YL++ K  VFQ F +FHAMVERET K+LKC+ TDNGGEY
Sbjct: 489  SLGGNKYFVTFIDDASRKTWVYLLQAKSQVFQCFQQFHAMVERETGKQLKCIRTDNGGEY 548

Query: 4544 TSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGSE 4723
             S+EF+DYC +YGIRHE+  PGTP HNGI ERMNR IVEKVR  +   K+ K   G+  +
Sbjct: 549  ISKEFKDYCSKYGIRHEKTVPGTPQHNGIAERMNRTIVEKVRCMLRMAKLPKPFWGEAVQ 608

Query: 4724 YCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPCI 4903
              +           GF         +            K+     K++R KLD+KA+PC+
Sbjct: 609  TAVYLINRLPSVPLGFDIPERVWAGKEVSYSHLKVFGCKAFMHVPKEQRSKLDDKAIPCV 668

Query: 4904 FFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDD----VEDAGLGXXXXXXX 5071
            F  YG+ +FGY+L D  ++ + R R+V F E +T+   +  +    +ED           
Sbjct: 669  FVGYGNEEFGYKLWDPERKRIVRSRDVIFHEHETIEDLKGGEAAKPMEDGVNPTSHVPSE 728

Query: 5072 XXXXXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQE 5251
                    Q    + EE      E   E ++   VPD   ++    S   G         
Sbjct: 729  CATDGRQTQEPEHETEEPVFGDEESVDEEVV---VPDTEANEQGEPSYTSG--------- 776

Query: 5252 KSSEKQIRMSDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSL 5431
               E QIR S R R PS +YP+S+YIL+ D+G+ E++ E Q+H+D+  W + +QEEM SL
Sbjct: 777  -QVEPQIRRSTRERQPSTKYPSSEYILIADEGEPESFQEVQSHKDKGCWVKAMQEEMDSL 835

Query: 5432 QKNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSL 5611
            ++N+TYELV L KGRR LKNKWV+++ +D DK  +R+KA+LVVKGF Q+ G++F+EIFS 
Sbjct: 836  KRNNTYELVQLPKGRRVLKNKWVFKLKKDGDKL-VRHKARLVVKGFSQKQGIDFEEIFSP 894

Query: 5612 IVKMTSIRLVLGLVASLDLELEQ 5680
            +VKM SIR++LGLVAS+DLELEQ
Sbjct: 895  VVKMCSIRVILGLVASMDLELEQ 917



 Score = 55.1 bits (131), Expect(3) = e-159
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +3

Query: 3708 VLTIQEQCLHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            +L  Q +C H+ + D EW++D AASYH  P +E+FT+Y +GD
Sbjct: 270  LLCNQGECCHIAEPDEEWIIDSAASYHCVPKREYFTTYRKGD 311



 Score = 30.0 bits (66), Expect(3) = e-159
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 3466 TDRRNDRGRSQSRGESQDHXXXXXXXXXXXXXXXHCGKPGHFKNDCKF 3609
            T+RR+ R +S++    +DH               +CGKPGH K +C+F
Sbjct: 200  TERRS-RSKSRTPRGHRDHSKSRERRSCY-----NCGKPGHLKKNCRF 241


>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease CAA32025.1 unnamed protein product
            [Nicotiana tabacum]
          Length = 1328

 Score =  508 bits (1308), Expect(3) = e-151
 Identities = 270/616 (43%), Positives = 379/616 (61%), Gaps = 3/616 (0%)
 Frame = +2

Query: 3842 VNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYLDFGGG 4021
            V MGN S+S+   IG+I ++T+VGCTL LKDVRHV DL+++LI G   +R+G    F   
Sbjct: 322  VKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQ 381

Query: 4022 KCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAALWHRRLGHMSEKGFQLLL 4201
            K ++TKG+LVI +G    TLY+T  ++ +G   +  ++    LWH+R+GHMSEKG Q+L 
Sbjct: 382  KWRLTKGSLVIAKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILA 441

Query: 4202 KKGLISFGKDTSLSSCDSCQTGKQQQVSFKTRSKVKPDVLQLIHSDICVPFEVASLGGNR 4381
            KK LIS+ K T++  CD C  GKQ +VSF+T S+ K ++L L++SD+C P E+ S+GGN+
Sbjct: 442  KKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNK 501

Query: 4382 YFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEYTSREFQ 4561
            YFVTFIDD SRK+W Y++KTKD VFQ F KFHA+VERET +KLK L +DNGGEYTSREF+
Sbjct: 502  YFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFE 561

Query: 4562 DYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGSEYCLLXX 4741
            +YC  +GIRHE+  PGTP HNG+ ERMNR IVEKVR  +   K+ K   G+  +      
Sbjct: 562  EYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLI 621

Query: 4742 XXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPCIFFSYGD 4921
                     F         +            ++     K++R KLD+K++PCIF  YGD
Sbjct: 622  NRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGD 681

Query: 4922 *QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXXXXXXXQV 5101
             +FGYRL D VK+ + R R+V F ES+  T  +  +    G+                  
Sbjct: 682  EEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAE 741

Query: 5102 QSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSSEKQ---I 5272
             ++D   ++ + P                  ++  Q E    G ++       E+Q   +
Sbjct: 742  STTDEVSEQGEQP-----------------GEVIEQGEQLDEGVEEVEHPTQGEEQHQPL 784

Query: 5273 RMSDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQKNDTYE 5452
            R S+R R  S RYP+++Y+L++D  + E+  E  +H ++ Q  + +QEEM SLQKN TY+
Sbjct: 785  RRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYK 844

Query: 5453 LVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIVKMTSI 5632
            LV L KG+R LK KWV+++ +D D   +RYKA+LVVKGF Q+ G++FDEIFS +VKMTSI
Sbjct: 845  LVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSI 904

Query: 5633 RLVLGLVASLDLELEQ 5680
            R +L L ASLDLE+EQ
Sbjct: 905  RTILSLAASLDLEVEQ 920



 Score = 51.6 bits (122), Expect(3) = e-151
 Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = +3

Query: 3705 VVLTI--QEQCLHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            VVL I  +E+C+H+   +SEWVVD AAS+HA+P ++ F  Y+ GD
Sbjct: 274  VVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGD 318



 Score = 31.2 bits (69), Expect(3) = e-151
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 3478 NDRGRSQSRGESQDHXXXXXXXXXXXXXXXHCGKPGHFKNDC 3603
            N+ GRS +RG+S++                +C +PGHFK DC
Sbjct: 210  NNYGRSGARGKSKNRSKSRVRNCY------NCNQPGHFKRDC 245


>AAK29467.1 polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  501 bits (1289), Expect(3) = e-149
 Identities = 272/614 (44%), Positives = 376/614 (61%), Gaps = 1/614 (0%)
 Frame = +2

Query: 3842 VNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYLDFGGG 4021
            V MGN S+S+   IG+I  +T+VGCTL LKDVRHV DL+++LI G   +++G    F   
Sbjct: 323  VKMGNTSYSKIAGIGDICFKTNVGCTLVLKDVRHVPDLRMNLISGIALDQDGYENYFANQ 382

Query: 4022 KCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAALWHRRLGHMSEKGFQLLL 4201
            K ++TKGALVI +G    TLY+T  ++ +G   +  E++ A LWH+R+GH SEKG Q+L 
Sbjct: 383  KWRLTKGALVIAKGVARGTLYRTNAEICQGELNAAHEENSADLWHKRMGHTSEKGLQILS 442

Query: 4202 KKGLISFGKDTSLSSCDSCQTGKQQQVSFKTRSKVKPDVLQLIHSDICVPFEVASLGGNR 4381
            KK LISF K T++  C+    GKQ +VSF+T S+ K ++L L++SD+C P E+ S+GGN+
Sbjct: 443  KKSLISFTKGTTIKPCNYWLFGKQHRVSFQTSSERKSNILDLVYSDVCGPMEIESMGGNK 502

Query: 4382 YFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEYTSREFQ 4561
            YFVTFIDD SRK+W Y+ + KD VFQ F KFHA+VERET +K K L TDNGGEYTSREF+
Sbjct: 503  YFVTFIDDASRKLWVYIFRAKDQVFQVFQKFHALVERETGRKRKRLRTDNGGEYTSREFE 562

Query: 4562 DYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGSEYCLLXX 4741
            +YC  +GIRHE+  PGTP HNG+ ERMNR IVEKVR  +   K+ K   G+         
Sbjct: 563  EYCSNHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKTFWGEAVRTACYLI 622

Query: 4742 XXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPCIFFSYGD 4921
                     F         +            K+     K++R KLD+K+VPCIF  YGD
Sbjct: 623  NRSPSVPLEFDIPERVWTNKEMSYSHLKVFGCKAFAHVPKEQRTKLDDKSVPCIFIGYGD 682

Query: 4922 *QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXXXXXXXQV 5101
             +FGYRL D VK+ + R R+V F ES+  T  +  +      G                +
Sbjct: 683  EEFGYRLWDLVKKKVIRSRDVIFRESEVGTAADLSEKAKKKNG---------IIPNLVTI 733

Query: 5102 QSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*G-EKDHHQEKSSEKQIRM 5278
             SS N      HP     ++  V   +    ++  Q E  G   E+  + E+   + +R 
Sbjct: 734  PSSSN------HPTSAESTIDEVVEQEEQPDEIVEQGEQLGDNTEQMEYPEEEQSQPLRR 787

Query: 5279 SDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQKNDTYELV 5458
            S+R R  S +YP+S+Y+L+  +G+ E   E  +H ++ QW + + EEM SLQKN TY+LV
Sbjct: 788  SERQRVESTKYPSSEYVLIKYEGEPENLKEVLSHPEKSQWMKAMHEEMGSLQKNGTYQLV 847

Query: 5459 ALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIVKMTSIRL 5638
             L KG+R LK KWV+++ +D +   +RYKA+LVVKGF Q+ G++FDEIFS +VKMTSIR 
Sbjct: 848  ELPKGKRPLKCKWVFKLKKDGNGKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRT 907

Query: 5639 VLGLVASLDLELEQ 5680
            +L + ASLDLE+EQ
Sbjct: 908  ILSIAASLDLEVEQ 921



 Score = 53.5 bits (127), Expect(3) = e-149
 Identities = 24/45 (53%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = +3

Query: 3705 VVLTI--QEQCLHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            VVL I  +E+C+H+   +SEWVVD AASYHA+P ++ F  Y+ GD
Sbjct: 275  VVLLINEEEECMHLAGTESEWVVDTAASYHATPVRDLFCRYVAGD 319



 Score = 28.5 bits (62), Expect(3) = e-149
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +1

Query: 3448 RRVSRGTDRRNDRGRSQSRGESQDHXXXXXXXXXXXXXXXHCGKPGHFKNDC 3603
            +R S    R   RG+S+ R +S+                 +C +PGHFK DC
Sbjct: 207  QRSSSNYGRSGARGKSKVRSKSKARNCY------------NCDQPGHFKRDC 246


>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score =  408 bits (1049), Expect(3) = e-121
 Identities = 240/627 (38%), Positives = 354/627 (56%), Gaps = 8/627 (1%)
 Frame = +2

Query: 3824 EGRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCY 4003
            +G    V MGN   S+ + IG I + T  G  L LK+VRHV D++L+LI  S  +  G  
Sbjct: 311  KGDFGMVKMGNHVTSKIVGIGEIALMTENGNKLMLKEVRHVPDMRLNLISVSKLDEAGMI 370

Query: 4004 LDFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAALWHRRLGHMSEK 4183
              F   + K+++G++++ +GK   +LY  + K+ KG  ++V +D    LWHRRLGHMSEK
Sbjct: 371  NQFSADRWKLSRGSMIVARGKKEGSLYTMQGKICKG-DMNVAQDASKELWHRRLGHMSEK 429

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSFKTR--SKVKPDVLQLIHSDICVPFE 4357
            G ++L K  L +  K   L SC+ C  GKQ +VSF+    ++ +  +L L+HSD+C   E
Sbjct: 430  GLEILAKDHLPNI-KGQPLESCEDCLAGKQHRVSFRRPDDARRRKHILDLVHSDVCSTSE 488

Query: 4358 VASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGG 4537
              S+GG +YFVTFIDD SRKVW Y +KTKD V Q F +FHA+VER T +KLKC+ TDNGG
Sbjct: 489  -RSIGGAQYFVTFIDDHSRKVWVYPLKTKDQVLQAFKEFHALVERATGRKLKCIRTDNGG 547

Query: 4538 EYTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQG 4717
            EY    F+ YC  +GIRHE+  P TP  NG+ ERMNR I EKVR  +   K+ K   G+ 
Sbjct: 548  EYLG-PFEYYCKTHGIRHEKVPPKTPQMNGVAERMNRTIAEKVRSMLSHAKIPKSFWGEA 606

Query: 4718 SEYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVP 4897
                                  E    +  +         ++     K +R KLD K   
Sbjct: 607  VLTAADLINLSPSRPLNGEIPEEVWSGKKAYYGHLKVFGCRAFVHIPKDERTKLDAKVKE 666

Query: 4898 CIFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTV------T*PERDDVEDAGLGXXX 5059
            CI+      + G+RL D V + + R R+V F E QT+        P++ +V+D+      
Sbjct: 667  CIYLRSPKDELGFRLWDPVNKKIVRSRDVIFFEDQTIQDIKKPEKPKQKEVQDSS----- 721

Query: 5060 XXXXXXXXXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKD 5239
                        ++    +E ++ + PE                     QS+     + +
Sbjct: 722  ---PIVINNSGGEISQRIDEPNQTEQPE-------------------SEQSQTMQEEQME 759

Query: 5240 HHQEKSSEKQIRMSDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEE 5419
             +QE+  E ++R S R+R PS RY +  Y+ LTD+G+ +++ EA    D+ +W Q ++EE
Sbjct: 760  TNQEE-QEPEVRRSMRVRQPSKRYFSDDYVNLTDEGEPQSFIEAIEMNDKEKWLQAMEEE 818

Query: 5420 MSSLQKNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDE 5599
            + SL++N+TYELV L +GR+ALKNKWV+++  +++ +  RYKA++VVKG  Q+ G++F+E
Sbjct: 819  LQSLKENETYELVELPQGRKALKNKWVFKLKTEENNTKPRYKARIVVKGCNQKKGIDFEE 878

Query: 5600 IFSLIVKMTSIRLVLGLVASLDLELEQ 5680
            IFS +VKMTSIR +LGL A LDLE+EQ
Sbjct: 879  IFSPVVKMTSIRAILGLAAKLDLEIEQ 905



 Score = 45.8 bits (107), Expect(3) = e-121
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = +3

Query: 3705 VVLTIQEQCLHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            V L  +E  L++  D+  W++D  AS+H +P +EFF+SY +GD
Sbjct: 271  VFLVGEENYLNIAFDECIWIIDSGASFHVTPHEEFFSSYQKGD 313



 Score = 34.7 bits (78), Expect(3) = e-121
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
 Frame = +1

Query: 3445 SRRVSRGTDRR------NDRGRSQSRGESQDHXXXXXXXXXXXXXXXHCGKPGHFKNDCK 3606
            SRR  RG + +      ++RGRS++R +                   +CGKPGH K++C+
Sbjct: 177  SRRRERGLNNQFEANVIDNRGRSKNREKGGRGKSQGRSKSRTRICCYYCGKPGHRKSECR 236

Query: 3607 F 3609
            F
Sbjct: 237  F 237


>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  422 bits (1084), Expect(2) = e-120
 Identities = 258/638 (40%), Positives = 350/638 (54%), Gaps = 20/638 (3%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G    + MGN    +    G + ++TS G  L LK+V+H  D++L+LI     + +G   
Sbjct: 312  GDFGELRMGNDGQVKVTGTGTVCLETSNGTKLVLKNVKHAPDIRLNLISTGKLDDDGFCC 371

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAA-LWHRRLGHMSEK 4183
             FG G  KITKG+LV+ +G     LY  +  V    S++VVE   A+ LWH+RLGHMS K
Sbjct: 372  FFGDGHWKITKGSLVVARGNKSSNLYSLQSSV-SDDSVNVVEKECASELWHKRLGHMSVK 430

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSFKTRSKV-KPDVLQLIHSDICVPFEV 4360
            G   L KK  +S  K+  L  C  C  GKQ++VSF +     K + L LIHSD+C P +V
Sbjct: 431  GIDYLAKKSKLSGVKEAKLDKCVHCLAGKQRRVSFMSHPPTRKSEPLDLIHSDVCGPMKV 490

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
             SLGG  YFVTFIDD SRK+W Y +K K  V   F +FHA+VER+T KKLKC+ TDNGGE
Sbjct: 491  RSLGGASYFVTFIDDYSRKLWVYTLKHKSDVLGVFKEFHALVERQTGKKLKCIRTDNGGE 550

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQG- 4717
            Y    F +YC +YGIRH++  P  P  NG+ ERMNR I+E+VR  ++D K+      +  
Sbjct: 551  YCG-PFDEYCRRYGIRHQKTPPKIPQLNGLAERMNRTIMERVRCMLDDAKLPSSFWAEAV 609

Query: 4718 ---------SEYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKR 4870
                     S    L          G   + + +   GC          K+     + +R
Sbjct: 610  STAVHVINLSPVIALKNEVPDKVWCGKDVSYDHLRVFGC----------KAFVHVPRDER 659

Query: 4871 QKLDNKAVPCIFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PER---DDVEDA 5041
             KLD+K   CIF  YG  +FGYRL D V++ + R R+V F E+QT+   ++    +  D+
Sbjct: 660  SKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQPESRDS 719

Query: 5042 GLGXXXXXXXXXXXXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENF 5221
            G                 +VQ +    D               PVPD     +D      
Sbjct: 720  GSLVDIEPVSRRYTDDVDEVQENVQNGD---------------PVPDYQGDTVDVD---- 760

Query: 5222 G*GEKDHHQEKSSEKQI-----RMSDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRD 5386
            G  +   HQE+    Q+     R SDR R PS RY  SQY+LLTD G+ E+Y EA     
Sbjct: 761  GHADDVVHQEQEVPSQVPVDLPRRSDRERRPSTRYSPSQYVLLTDGGEPESYEEAMESDQ 820

Query: 5387 RVQWHQVIQEEMSSLQKNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKG 5566
            + QW + +QEEM+SL  NDT+ELV   K R+ALKN+WVYR+  ++  S  R+KA+LVVKG
Sbjct: 821  KRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKARLVVKG 880

Query: 5567 FGQRPGVEFDEIFSLIVKMTSIRLVLGLVASLDLELEQ 5680
            F Q+ G++FDEIFS +VK +SIR+VLGL A LD+E+EQ
Sbjct: 881  FSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQ 918



 Score = 44.3 bits (103), Expect(2) = e-120
 Identities = 17/43 (39%), Positives = 28/43 (65%)
 Frame = +3

Query: 3705 VVLTIQEQCLHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            +++   +  ++V   ++ W+VD  A+YH +P KEFFTSY  GD
Sbjct: 271  LLVACDDNVINVACHETTWIVDSGAAYHVTPRKEFFTSYTPGD 313


>KYP60296.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 990

 Score =  410 bits (1055), Expect = e-118
 Identities = 247/636 (38%), Positives = 353/636 (55%), Gaps = 23/636 (3%)
 Frame = +2

Query: 3842 VNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYLDFGGG 4021
            + MGN   S+ I +G++++QT++G  L L+ V+HV D++ +LI     +  G    FG G
Sbjct: 234  LKMGNDGVSKVIGVGDVFLQTNMGMQLLLRGVKHVPDVRFNLISVQILDDGGYDNHFGSG 293

Query: 4022 KCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAALWHRRLGHMSEKGFQLLL 4201
            K K+TKG LV+ +G+    LY T+  V K    ++  D +A+LWHRRL H+SEKG   L 
Sbjct: 294  KWKLTKGNLVVARGEKNSKLYWTKALVAKDNVNAM--DMEASLWHRRLSHISEKGLNCLA 351

Query: 4202 KKGLISFGKDTSLSSCDSCQTGKQQQVSFKTRSKV-KPDVLQLIHSDICVPFEVASLGGN 4378
            KK ++   K   L  C  C  GKQ +VSFK      K  +LQL+HSD+C P +V S  G 
Sbjct: 352  KKDVLQGLKIAELEKCSHCMAGKQTRVSFKKHPPSRKSKLLQLVHSDVCGPLKVKSFSGA 411

Query: 4379 RYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEYTSREF 4558
             YFVTFIDD S+K+W Y ++ KD V + F +FHA+VER++ KKLK + TDNGGEY    F
Sbjct: 412  LYFVTFIDDCSKKLWVYALQRKD-VLERFKQFHALVERQSGKKLKRIRTDNGGEYCG-PF 469

Query: 4559 QDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQG------- 4717
              YC Q+GI HE+  P TP  N + ERMN  ++E+VR  + D K+ K   G+        
Sbjct: 470  DVYCKQHGIAHEKTPPKTPQLNDLAERMNMTLLERVRCMLSDAKLPKHFWGEALYTAVHV 529

Query: 4718 ---SEYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNK 4888
               +   +L         FG   + + +   GC          K+     + +R KLD K
Sbjct: 530  INLTPTVILNSEVPDKIWFGKNASYDHLRVFGC----------KAFVHIPRDERSKLDTK 579

Query: 4889 AVPCIFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTV--------T*PERD----DV 5032
               CIF  YG+ +FGYR  D +++ + R R+V F E QT+        T PE+D    DV
Sbjct: 580  TRQCIFIGYGEDEFGYRFYDPIEKKLVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNLTDV 639

Query: 5033 EDAGLGXXXXXXXXXXXXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQS 5212
            +   L                 VQ  +  +D  D   Q     L VP+ D      D + 
Sbjct: 640  DPMRL------PIHNLDNVDGSVQPGEQHDDVDD---QQLGGGLDVPIDD------DQEE 684

Query: 5213 ENFG*GEKDHHQEKSSEKQIRMSDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRV 5392
                  E      +  + Q+R S+R R PS RY + +Y+ LTD G+ E + EA    ++ 
Sbjct: 685  HEMSHDENIDDAPEPHQVQLRRSNRQRQPSTRYSSDEYVTLTDGGEPECFEEALESEEKQ 744

Query: 5393 QWHQVIQEEMSSLQKNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFG 5572
            QW   +Q+EM SL  N TY+LV L KG+RAL+N+W++R+ ++ + ++ RYKA+LVVKGF 
Sbjct: 745  QWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFRVKQESNSTSPRYKARLVVKGFR 804

Query: 5573 QRPGVEFDEIFSLIVKMTSIRLVLGLVASLDLELEQ 5680
            QR GV+F+EIFS +VKM+SIR VL L A+L+LE+EQ
Sbjct: 805  QRKGVDFNEIFSPVVKMSSIRAVLSLAATLNLEVEQ 840


>CAN66323.1 hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score =  380 bits (975), Expect = e-105
 Identities = 219/561 (39%), Positives = 311/561 (55%), Gaps = 13/561 (2%)
 Frame = +2

Query: 4037 KGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAALWHRRLGHMSEKGFQLLLKKGLI 4216
            +G++VI +G    +LY  + +V+     +V +D    LWH RLGHMSEKG  +L K  L+
Sbjct: 335  RGSMVIAKGNKSSSLYLMQARVIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKNNLL 394

Query: 4217 SFGKDTSLSSCDSCQTGKQQQVSFKT-RSKVKPDVLQLIHSDICVPFEVASLGGNRYFVT 4393
            S  K  SL  C  C  GKQ +V+FKT R   KP +  L++SD+C P +  +LGG+ YFVT
Sbjct: 395  SGMKKGSLKRCAHCLAGKQTRVAFKTLRHTRKPGMFDLVYSDVCGPMKTKTLGGSLYFVT 454

Query: 4394 FIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEYTSREFQDYCM 4573
            FIDD SRK+W Y +KTKD V   F +FHA+VER++ +KLKC+ TDNGGEY S  F +YC 
Sbjct: 455  FIDDHSRKIWVYTLKTKDQVLDVFKQFHALVERQSGEKLKCIRTDNGGEY-SGPFDEYCR 513

Query: 4574 QYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGSEYCLLXXXXXX 4753
            Q+ IRH++  P TP  NG+ ERMNR +VE+VR  +   ++ +    +     +       
Sbjct: 514  QHDIRHQKTPPKTPQLNGLAERMNRTLVERVRCLLSQSQLPRSFWDEALNTVVHVLNLTP 573

Query: 4754 XXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPCIFFSYGD*QFG 4933
                 F  +                   K+     K +R KLD K  PC+F  YG  + G
Sbjct: 574  CVPLEFDVSDRIWSNNEISYDHLRVFGCKAFVHIPKDERSKLDVKTRPCVFIGYGQDELG 633

Query: 4934 YRL*DHVKRTMSRHRNVAFCESQTVT*PER-DDVEDAGLGXXXXXXXXXXXXXXXQV--Q 5104
            YR  D V++ + R R+V F E  T+   E+ + +E    G               QV  +
Sbjct: 634  YRFYDPVQKKLVRSRDVVFMEDHTIQDIEKTNPMESQHSGDLIDLDLAPLKNLPTQVEDE 693

Query: 5105 SSDNEEDK---------QDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKS 5257
            + D++ D          +D        M  V +P     D D         E+    E  
Sbjct: 694  AHDDQHDMGDVETPTQVEDETHDDQHDMGDVEIPTQVEVDDDVH-------EQSPAAEAP 746

Query: 5258 SEKQIRMSDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQK 5437
            S+  +R   R RHPS RY    Y+LLTD  + E+Y EA    ++++W   +++EM SL +
Sbjct: 747  SDIPLRRFTRDRHPSTRYSVDDYVLLTDGEEPESYVEAMKDENKMKWVDXMRDEMESLHE 806

Query: 5438 NDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIV 5617
            N ++ELV L KG+R LKN+WVYR+ +++  S  RYKA+LVVKGF Q+ G++FDEIFS +V
Sbjct: 807  NHSFELVKLPKGKRXLKNRWVYRVKQEEHTSQPRYKARLVVKGFNQKKGIDFDEIFSPVV 866

Query: 5618 KMTSIRLVLGLVASLDLELEQ 5680
            KM+SIR+VLGL ASLDLE++Q
Sbjct: 867  KMSSIRVVLGLAASLDLEIQQ 887


>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
            1-94 [Gossypium arboreum]
          Length = 1184

 Score =  371 bits (952), Expect = e-103
 Identities = 227/617 (36%), Positives = 336/617 (54%), Gaps = 5/617 (0%)
 Frame = +2

Query: 3845 NMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYLDFGGGK 4024
            +MGN      I +G++ + ++ G  LTL DVRH  D++L+LI     + EG    F  G+
Sbjct: 213  HMGNDGLVSVIGMGDVSLVSNNGTKLTLNDVRHEPDVRLNLISAGKLDDEGFCNTFSEGQ 272

Query: 4025 CKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAALWHRRLGHMSEKGFQLLLK 4204
             K+TKG+LV+ +GK    LY  +    +      + D+   LWH+RL HMSEKG   L K
Sbjct: 273  WKLTKGSLVVARGKKSSNLYLMQALTSRETVNVTLNDNSTELWHKRLSHMSEKGLSCLAK 332

Query: 4205 KGLISFGKDTSLSSCDSCQTGKQQQVSFKTRSK-VKPDVLQLIHSDICVPFEVASLGGNR 4381
            K  +S  K+ +L +C  C  GKQ++VSF++     K ++L+L+HSD+C P +V S GG  
Sbjct: 333  KNQLSGLKNATLKNCAHCLAGKQKRVSFRSHPPHKKSELLELVHSDVCGPIKVRSYGGAL 392

Query: 4382 YFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEYTSREFQ 4561
            YFVTFIDD SRK+W Y +K+K+ VF+ F +F A VERET+KKLKC+ TDNGGEYT R F 
Sbjct: 393  YFVTFIDDCSRKLWVYTLKSKNQVFEVFKQFQASVERETEKKLKCIRTDNGGEYT-RSFH 451

Query: 4562 DYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGSEYCLLXX 4741
            +YC++ GIRH+R  P TP  NG+ ERMNR ++E+VR  + D K+ +              
Sbjct: 452  EYCLRQGIRHQRTPPKTPQLNGLAERMNRTLIERVRCLLSDAKLPRSFWA---------- 501

Query: 4742 XXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPCIFFSYGD 4921
                          E ++T    +  S S+ +K            + ++       SY  
Sbjct: 502  --------------EALNTVTHVINLSPSVPLKG----------DVPDRVWFVKGVSYDH 537

Query: 4922 *Q-FGYRL*DHVKRTMSRHRNVAFCESQTVT*PER-DDVEDAGLGXXXXXXXXXXXXXXX 5095
             + FG ++  H K  + R R+V F E QT+   ++ + V+  G G               
Sbjct: 538  LRVFGCKVFVHKK--LVRSRDVVFIEDQTIDDIDKTEKVDSQGSGDLIDVNPVPLDSSPD 595

Query: 5096 QVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSSEKQI- 5272
             +Q   + +   DH    +    + P+ D                  D  Q   +   + 
Sbjct: 596  PIQDDVHGDVSGDHQ---TIGDFATPIDDV---------------VNDQQQAPIAPPAVP 637

Query: 5273 -RMSDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQKNDTY 5449
             R S R R  S +Y   +Y+LLTD G+   Y EA     + QW + +++++ SL +N T+
Sbjct: 638  LRRSSRDRRSSVKYSPDEYVLLTDGGEPGCYEEAMESECKDQWVEAMKDKLQSLHENHTF 697

Query: 5450 ELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIVKMTS 5629
            ELV L KG+RALKN+WVYR+ +++  S+ RYKA+LVVKG+ Q+ GV+F+EIFS +VKM+S
Sbjct: 698  ELVKLPKGKRALKNRWVYRLKQEEKSSSPRYKARLVVKGYTQKKGVDFEEIFSPVVKMSS 757

Query: 5630 IRLVLGLVASLDLELEQ 5680
            IR +L L A  DLE+EQ
Sbjct: 758  IRTILSLAACYDLEVEQ 774


>KYP68607.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1291

 Score =  349 bits (895), Expect(3) = 4e-98
 Identities = 220/621 (35%), Positives = 324/621 (52%), Gaps = 3/621 (0%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            GR  +V + +      +  G+I ++TS G   TLK+VRH+  L+ +LI     + EG   
Sbjct: 291  GRFGKVYLADGKPLNIVGKGDIAIRTSSGSHWTLKNVRHIPALKRNLISVGQLDDEGHET 350

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVED-HQAALWHRRLGHMSEK 4183
             FG G  K+ KG L++ +GK   +LY     V     I+V E  + + LWH+RLGHMSEK
Sbjct: 351  TFGDGAWKVKKGNLIVARGKKRGSLYM----VADENMIAVTEAANNSFLWHQRLGHMSEK 406

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSFKTRSK-VKPDVLQLIHSDICVPFEV 4360
            G +L+  KG +S  K   + +C+ C  GKQ+++SF  + K +K + L+L+H+D+  P  V
Sbjct: 407  GMKLMATKGKLSKLKHVDVGTCEHCILGKQRKISFSRQGKTLKTERLELVHTDVWGPAPV 466

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
             SLGG+ Y+VTFIDD +RKVW Y +K K  VF  F ++   VE +T  KLK L +DNGGE
Sbjct: 467  KSLGGSCYYVTFIDDATRKVWVYFLKNKSDVFSVFKRWKTEVENQTGLKLKSLKSDNGGE 526

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y S EF+++C ++GIR  +  PGTP  NG+ ERMNR + E+ R       + K       
Sbjct: 527  YNSHEFKNFCSEHGIRMIKTIPGTPEQNGVAERMNRTLNERARCMRIQSGLPKVFWADAI 586

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                           G+    E    +   L         S        R KLD KA  C
Sbjct: 587  NTAAYLINRGPSVPLGYQLPEEVWSGKEVNLSHLRVFGCVSYVLIDSDSRDKLDPKAKKC 646

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXX 5080
             F  YG   +GYR  D   + + R RNV F E+                           
Sbjct: 647  YFIGYGSDMYGYRFWDDQNKKIIRSRNVTFNEN--------------------------- 679

Query: 5081 XXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSS 5260
                 +  +   + DK   P +       V + +   SD+  +S++         + + +
Sbjct: 680  LFYKDRFSAESIDTDKLPEPSE------KVELEEISESDITNRSQS----TDIEVESEPA 729

Query: 5261 EKQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQK 5437
               +R S R+     RY P+  Y+LLTD G+ E + EA    D V+W   +++EM+SLQK
Sbjct: 730  SPPLRRSCRVSVAPERYSPSLHYLLLTDAGEPEYFDEAIQGNDSVKWELAMKDEMTSLQK 789

Query: 5438 NDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIV 5617
            N T+ L  L +G+ AL+NKWVYR+ +++     RYKA+LVVKGF Q+PG++F EIFS +V
Sbjct: 790  NGTWSLTELPEGKMALQNKWVYRL-KEESDGRKRYKARLVVKGFQQKPGIDFTEIFSPVV 848

Query: 5618 KMTSIRLVLGLVASLDLELEQ 5680
            KMT+IR++L +VA+ +L LEQ
Sbjct: 849  KMTTIRVILSIVAAENLHLEQ 869



 Score = 33.1 bits (74), Expect(3) = 4e-98
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 3759 WVVDIAASYHASPSKEFFTSYMRG 3830
            W++D  AS+H +PS E  T+Y+ G
Sbjct: 268  WIMDSGASFHTTPSNELLTNYVSG 291



 Score = 30.4 bits (67), Expect(3) = 4e-98
 Identities = 18/54 (33%), Positives = 23/54 (42%)
 Frame = +1

Query: 3478 NDRGRSQSRGESQDHXXXXXXXXXXXXXXXHCGKPGHFKNDCKFE*ENMGLKAK 3639
            N RGRS+SR + Q                 +C K GHF N CK   +N   K +
Sbjct: 194  NSRGRSKSRAKGQPKFRNDIVCW-------NCDKRGHFTNQCKAPKKNKNHKKR 240


>CAN71109.1 hypothetical protein VITISV_001479 [Vitis vinifera]
          Length = 1246

 Score =  353 bits (907), Expect(2) = 4e-97
 Identities = 234/622 (37%), Positives = 315/622 (50%), Gaps = 4/622 (0%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G   +V + + S    + +G++ +    G    L+ VRH+ DL+ +LI     + EG  +
Sbjct: 281  GDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAI 340

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVE-DHQAALWHRRLGHMSEK 4183
             F GG  K+TKGA V+ +GK   TLY T        +I+V +     +LWHRRLGHMSEK
Sbjct: 341  LFVGGTWKVTKGARVLARGKKTGTLYMTSCP---RDTIAVADASTDTSLWHRRLGHMSEK 397

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSF-KTRSKVKPDVLQLIHSDICVPFEV 4360
            G ++LL KG +   K      C+SC  GKQ++VSF KT    K + L+L+H+D+  P  V
Sbjct: 398  GMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPV 457

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
            ASLGG+RY++TFIDD+SRKVW Y +K K  VF  F K+  MVE ET  K+KCL +DNGGE
Sbjct: 458  ASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKXMVETETGLKVKCLRSDNGGE 517

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y    F +YC   GIR E+  PGTP  NG+ ERMNR + E+ R       + K       
Sbjct: 518  YIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 577

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                            F    E    +             S        R KLD K+  C
Sbjct: 578  STAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKIC 637

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDV-EDAGLGXXXXXXXXX 5077
             F  YGD +FGYR  D   R + R RNV F  ++ V   +R  V  D             
Sbjct: 638  FFIGYGDEKFGYRFWDEQNRKIIRSRNVIF--NEQVMYKDRSTVTSDVTEIDQKKSEFVN 695

Query: 5078 XXXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKS 5257
                         EEDK++     S+  LS PV                           
Sbjct: 696  LDELTESTVQKGGEEDKENVN---SQVDLSTPV--------------------------- 725

Query: 5258 SEKQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQ 5434
               ++R S R   P  RY P   Y+LLTD G+ E Y EA    +  +W   +++EM SL 
Sbjct: 726  --VEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLL 783

Query: 5435 KNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLI 5614
             N T+EL  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ G+++ EIFS +
Sbjct: 784  GNQTWELTELPVGKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPV 842

Query: 5615 VKMTSIRLVLGLVASLDLELEQ 5680
            VKM++IRLVLG+VA+ +L LEQ
Sbjct: 843  VKMSTIRLVLGMVAAENLHLEQ 864



 Score = 34.3 bits (77), Expect(2) = 4e-97
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 3732 LHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            L V+    +WV+D  AS+H +P +E   +Y+ GD
Sbjct: 249  LAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGD 282


>CAN66898.1 hypothetical protein VITISV_037436 [Vitis vinifera]
          Length = 1183

 Score =  352 bits (902), Expect = 9e-97
 Identities = 236/621 (38%), Positives = 316/621 (50%), Gaps = 3/621 (0%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G   +V + + S    + +G++ +    G    L+ VRH+ DL+ +LI     + EG  +
Sbjct: 272  GDFGKVYLADGSALDVVGLGDVRISLPNGSVCLLEKVRHIPDLRRNLISVGQLDDEGHAI 331

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVE-DHQAALWHRRLGHMSEK 4183
             F GG  K+TKGA V+ +GK   TLY T        +I+V +      LWHRRLGHMSEK
Sbjct: 332  LFVGGTWKVTKGARVLARGKKTGTLYMTSCP---RDTIAVADASTDTNLWHRRLGHMSEK 388

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSF-KTRSKVKPDVLQLIHSDICVPFEV 4360
            G ++LL KG +   K      C+SC  GKQ++VSF KT    K + L+L+H+D+  P  V
Sbjct: 389  GMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPV 448

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
            ASLGG+RY++TFIDD+SRKVW Y +K K  VF  F K+ AMVE ET  K+KCL  DNGGE
Sbjct: 449  ASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRLDNGGE 508

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y    F +YC   GIR E+  P TP  NG+ ERMNR + E+ R   +    A  ++ +G 
Sbjct: 509  YIDGGFSEYCAAQGIRMEKTIPRTPQQNGVAERMNRTLNERAR--TDAVSTATYLINRGP 566

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                +          G       +   GC           S        R KLD K+  C
Sbjct: 567  S-VPMEFRLPEEVWSGKEVKFSHLKVFGCI----------SYVHIDSDARSKLDAKSKIC 615

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXX 5080
             F  YGD +FGYR  D   R + R RNV F E Q +       V D              
Sbjct: 616  FFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNE-QVMYKDRSSVVSDVTEIDQKKSEFVNL 674

Query: 5081 XXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSS 5260
                        EEDK++     S+  LS PV                            
Sbjct: 675  DELTKSTVQKGGEEDKENVN---SQVDLSTPV---------------------------- 703

Query: 5261 EKQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQK 5437
              ++R S R   P  RY P   Y+LLTD G+ E Y EA    +  +W   +++EM SL  
Sbjct: 704  -VEVRRSSRNXRPPQRYSPVLNYLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLLG 762

Query: 5438 NDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIV 5617
            N T+EL  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ G ++ EIFS +V
Sbjct: 763  NQTWELTELPIGKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGXDYTEIFSPVV 821

Query: 5618 KMTSIRLVLGLVASLDLELEQ 5680
            KM++IRLVLG+VA+ +L LEQ
Sbjct: 822  KMSTIRLVLGMVAAENLHLEQ 842


>CAN69340.1 hypothetical protein VITISV_032634 [Vitis vinifera]
          Length = 1298

 Score =  350 bits (898), Expect(2) = 4e-96
 Identities = 229/621 (36%), Positives = 312/621 (50%), Gaps = 3/621 (0%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G   +V + + S    + +G++ +    G    L+ VRH+ DL+ +LI     + EG  +
Sbjct: 309  GDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAI 368

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVE-DHQAALWHRRLGHMSEK 4183
             F GG  K+TKG  V+ +GK   TLY T        +I+V +     +LWHRRLGHMSEK
Sbjct: 369  LFVGGTWKVTKGVRVLARGKKTGTLYMTSCP---RDTIAVADASTDTSLWHRRLGHMSEK 425

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSF-KTRSKVKPDVLQLIHSDICVPFEV 4360
            G ++LL KG +   K      C+SC  GKQ++VSF KT    K + L+L+H+D+  P  V
Sbjct: 426  GMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPV 485

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
            ASLGG+RY++TFIDD+SRKVW Y +K K  VF  F K+ AMVE ET  K+KCL +DNGGE
Sbjct: 486  ASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGE 545

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y    F +YC   GIR E+  PGTP  NG+ ERMNR + E+ R       + K       
Sbjct: 546  YIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 605

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                            F    E    +             S        R KLD K+  C
Sbjct: 606  STAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKIC 665

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXX 5080
             F  YGD +FGYR  D   R + R RNV F E        +D +                
Sbjct: 666  FFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMY----KDRLTVTSXVTEIDQKKSEF 721

Query: 5081 XXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSS 5260
                   +S+  +  ++D     S+  L  PV                            
Sbjct: 722  VNLDELTESTVQKRGEEDKENVNSKVDLRTPV---------------------------- 753

Query: 5261 EKQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQK 5437
              ++R S R   P  RY P   Y+LLTD G+ E Y+EA    +  +W   +++EM SL  
Sbjct: 754  -VEVRRSSRNIRPPQRYSPVLNYLLLTDGGEPECYNEALQDENSSKWELAMKDEMDSLLG 812

Query: 5438 NDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIV 5617
            N T+EL  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ G+++ EIFS +V
Sbjct: 813  NQTWELTELPVGKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYIEIFSPVV 871

Query: 5618 KMTSIRLVLGLVASLDLELEQ 5680
            KM++IRLVLG+VA  +L LEQ
Sbjct: 872  KMSTIRLVLGMVAVENLHLEQ 892



 Score = 34.3 bits (77), Expect(2) = 4e-96
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 3732 LHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            L V+    +WV+D  AS+H +P +E   +Y+ GD
Sbjct: 277  LAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGD 310


>KYP40337.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1269

 Score =  346 bits (888), Expect(2) = 4e-96
 Identities = 229/619 (36%), Positives = 314/619 (50%), Gaps = 1/619 (0%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G L +V +GN      +  G + ++ + G    LK+VRH+ DL  +LI       +G   
Sbjct: 287  GNLGKVYLGNEQSCEIVGKGVVKIKLN-GSVWELKNVRHIPDLTKNLISVGQLASDGYTT 345

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVEDHQAALWHRRLGHMSEKG 4186
             F G + KI+KGA+ I +GK   TLYKT         I+V  +    LWH+RLGHMSEKG
Sbjct: 346  IFQGEQWKISKGAMTIARGKKSGTLYKTTEAC---HLITVAANDNPNLWHQRLGHMSEKG 402

Query: 4187 FQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSFKTRSKV-KPDVLQLIHSDICVPFEVA 4363
             +++  KG +   +   +  C+ C  GKQ++VSF+   +  K + L+L+HSD+  P  V+
Sbjct: 403  MKIMHSKGKLPGLQSMEIEMCEDCIFGKQKRVSFQKGGRTPKKERLELVHSDVWGPTTVS 462

Query: 4364 SLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEY 4543
            S+ G +YFVTFIDD SRKVW Y +K K  VF+ F  + AMVE ET  K+K L TDNGGEY
Sbjct: 463  SISGKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKAMVENETGLKIKKLRTDNGGEY 522

Query: 4544 TSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGSE 4723
                F+ +C ++GIR ER  PGTP  NG+ ERMNR + E+ R       + K    +   
Sbjct: 523  EDTRFKRFCYEHGIRMERTVPGTPQQNGVAERMNRTLTERARSMRMQSGLPKQFWAEAVN 582

Query: 4724 YCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPCI 4903
                                E    +   L         +    S + R KLD K+  C 
Sbjct: 583  TAAYLINRGPSVPLEHKIPEEVWSGKEVKLSHLRVFGCVAYVHISDQGRNKLDPKSKKCT 642

Query: 4904 FFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXXX 5083
            F  YG+ +FGYRL D   + M R R+V F E                             
Sbjct: 643  FIGYGEDEFGYRLWDDENKKMIRSRDVIFNEG---------------------------- 674

Query: 5084 XXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSSE 5263
                  Q++     K   P         V V DA  S     S++    E D  Q+   E
Sbjct: 675  VMYKDKQNTSASNSKPIEPTY-------VEVDDALESPPVESSQSVESIEPDRGQQCVPE 727

Query: 5264 KQIRMSDRIRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQKND 5443
             ++R S R+  P+ RY    Y+LLTD G+ E Y EA   RD  +W   ++EEM SL  N 
Sbjct: 728  PELRRSSRVPVPNRRY--MNYMLLTDGGEPEDYSEACQTRDASKWELAMKEEMKSLISNQ 785

Query: 5444 TYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIVKM 5623
            T+EL  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ GV++ EIFS +VK+
Sbjct: 786  TWELAKLPMGKKALHNKWVYRVKEEHDGSK-RYKARLVVKGFQQKEGVDYTEIFSPVVKL 844

Query: 5624 TSIRLVLGLVASLDLELEQ 5680
             +IR VL +VAS +L LEQ
Sbjct: 845  NTIRTVLSIVASEELYLEQ 863



 Score = 38.1 bits (87), Expect(2) = 4e-96
 Identities = 14/33 (42%), Positives = 23/33 (69%)
 Frame = +3

Query: 3738 VEDDDSEWVVDIAASYHASPSKEFFTSYMRGDL 3836
            +E+ +  WV+D  AS+HA+  KE F +Y+ G+L
Sbjct: 257  LENKEESWVIDSGASFHATSQKELFENYVSGNL 289


>CAN74198.1 hypothetical protein VITISV_005765 [Vitis vinifera]
          Length = 1261

 Score =  347 bits (891), Expect(2) = 3e-95
 Identities = 230/622 (36%), Positives = 315/622 (50%), Gaps = 4/622 (0%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G   +V + + S    + +G++ +    G    L+ VR++ DL+ +LI     + EG  +
Sbjct: 272  GDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRYIPDLRRNLISVGQLDDEGHAI 331

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVE-DHQAALWHRRLGHMSEK 4183
             F GG  K+TKGA V+ +GK   TLY T        +I+V +     +LWHRRLGHMSEK
Sbjct: 332  LFVGGTWKVTKGARVLARGKKTDTLYMTSCP---RDTIAVADASTDTSLWHRRLGHMSEK 388

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSF-KTRSKVKPDVLQLIHSDICVPFEV 4360
              ++LL KG +   K      C+SC  GKQ++VSF KT    K + L+L+H+D+  P  V
Sbjct: 389  WMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPV 448

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
            ASLGG+RY++TFI+D+SRKVW Y +K K  VF  F K+ AMVE ET  K+KCL +DNGGE
Sbjct: 449  ASLGGSRYYITFINDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGE 508

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y    F +YC   GIR E+  PGTP  NG+ ERMNR + E+ R       + K       
Sbjct: 509  YIDGGFSEYCXAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADAV 568

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                            F    E    +             S        R KLD K+  C
Sbjct: 569  STAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDARSKLDAKSKIC 628

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDV-EDAGLGXXXXXXXXX 5077
             F  YGD +FGYR  D   R + R RNV F  ++ V   +R  V  D             
Sbjct: 629  FFIGYGDEKFGYRFWDEQNRKIIRSRNVIF--NEQVMYKDRSTVTSDVTEIDQKKSEFVN 686

Query: 5078 XXXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKS 5257
                         EEDK++     S+  LS P+                           
Sbjct: 687  LDELTESTVQKGGEEDKENVN---SQVDLSTPI--------------------------- 716

Query: 5258 SEKQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQ 5434
               ++R S R   P  RY P   Y+LLTD G+ E Y EA    +  +W   +++EM SL 
Sbjct: 717  --VEVRRSSRNTRPPQRYSPVLNYLLLTDGGEPECYDEALQDENSSKWELAMKDEMDSLL 774

Query: 5435 KNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLI 5614
             N T++L  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ G+++ EIFS +
Sbjct: 775  GNQTWZLTELPVGKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPV 833

Query: 5615 VKMTSIRLVLGLVASLDLELEQ 5680
            VKM++IRLVLG+VA+ +L LEQ
Sbjct: 834  VKMSTIRLVLGMVAAENLHLEQ 855



 Score = 34.3 bits (77), Expect(2) = 3e-95
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 3732 LHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            L V+    +WV+D  AS+H +P +E   +Y+ GD
Sbjct: 240  LAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGD 273


>CAN61435.1 hypothetical protein VITISV_033767 [Vitis vinifera]
          Length = 1298

 Score =  346 bits (887), Expect(2) = 7e-95
 Identities = 233/627 (37%), Positives = 311/627 (49%), Gaps = 9/627 (1%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G   +V + + S    + +G++ +    G    L+ VRH+ DL+ +LI     + EG  +
Sbjct: 309  GDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAI 368

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVE-DHQAALWHRRLGHMSEK 4183
             F GG  K+TKGA V+ +GK   TLY T        +I+V +     +LWHRRLGHMSEK
Sbjct: 369  LFVGGTWKVTKGARVLARGKKTXTLYMTSCP---RDTIAVADASTDTSLWHRRLGHMSEK 425

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSF-KTRSKVKPDVLQLIHSDICVPFEV 4360
            G ++LL KG +   K      C+SC  GKQ++VSF KT    K + L+L+H+D+  P  V
Sbjct: 426  GMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPV 485

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
            ASLGG+RY++TFIDD+SRKVW Y +K K  VF  F K+ AMVE ET  K KCL +DNGGE
Sbjct: 486  ASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFXTFKKWKAMVETETXLKXKCLRSDNGGE 545

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y    F +YC   GI  E+  PGTP  NG+ ER N  + E+ R       + K       
Sbjct: 546  YIDGGFSEYCAAQGIXMEKTIPGTPQQNGVXERXNXTLNERARSMRLHAGLPKTFXADAV 605

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                            F    E    +             S          KLD K+  C
Sbjct: 606  STAAYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFGCVSYVHIDSDAXSKLDAKSKIC 665

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCES------QTVT*PERDDVEDAGLGXXXX 5062
             F  YGD +FGYR  D   R + R RNV F E        TVT     DV +        
Sbjct: 666  FFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNEQVMYKDRSTVT----XDVTEIDQKKSEF 721

Query: 5063 XXXXXXXXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDH 5242
                       Q     N+E+        S+  LS PV                      
Sbjct: 722  VNLDEXTESTVQKGGEKNKENVN------SQVXLSTPV---------------------- 753

Query: 5243 HQEKSSEKQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEE 5419
                    ++R S R   P  RY P   Y+LLTD G+ E Y EA    +  +W   +++E
Sbjct: 754  -------AEVRRSXRNIRPPQRYSPVLNYLLLTDGGEPECYDEALQDENSSKWELAMKDE 806

Query: 5420 MSSLQKNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDE 5599
            M SL  N T+EL  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ G+++ E
Sbjct: 807  MDSLLGNQTWELTELPVGKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTE 865

Query: 5600 IFSLIVKMTSIRLVLGLVASLDLELEQ 5680
            IFS +VKM++IRLVLG+VA+ +L LEQ
Sbjct: 866  IFSPVVKMSTIRLVLGMVAAENLHLEQ 892



 Score = 34.3 bits (77), Expect(2) = 7e-95
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 3732 LHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            L V+    +WV+D  AS+H +P +E   +Y+ GD
Sbjct: 277  LAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGD 310


>CAN63196.1 hypothetical protein VITISV_035792 [Vitis vinifera]
          Length = 1179

 Score =  345 bits (884), Expect = 2e-94
 Identities = 234/622 (37%), Positives = 317/622 (50%), Gaps = 4/622 (0%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G   +V + + S    + +GN+ +    G    L+ VRH+SDL+ +LI     + EG  +
Sbjct: 309  GDFGKVYLADGSALDVVGLGNVRISLPNGSVWLLEKVRHISDLKRNLISVGQLDDEGHAI 368

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVE-DHQAALWHRRLGHMSEK 4183
             F  G  K+TKGA V+ +GK   TLY T        +I+V +     +LWHRRLGHMSEK
Sbjct: 369  LFVDGTWKVTKGARVLARGKKTGTLYMTSCS---RDTIAVADASTDTSLWHRRLGHMSEK 425

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSF-KTRSKVKPDVLQLIHSDICVPFEV 4360
            G ++LL KG +   K      C+SC  GKQ++VSF KT    K + L+L+H+D+  P  V
Sbjct: 426  GMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWRPSPV 485

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
            ASLGG+RY++TFIDD+SRKVW Y +K K  VF  F K+  MVE ET  K+K L +DNGGE
Sbjct: 486  ASLGGSRYYITFIDDSSRKVWVYFLKNKFDVFVTFKKWKVMVEIETGLKVKYLRSDNGGE 545

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y    F +YC   GIR E+  PGTP  NG+ ERMNR + E+ R +         ++ +G 
Sbjct: 546  YIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARTY---------LINRGP 596

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                +          G       +   GC           S        R KLD K+  C
Sbjct: 597  S-VPMDFRLPEEVWSGKEVKFSHLKVFGCV----------SYVHIDSDARSKLDAKSKIC 645

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDV-EDAGLGXXXXXXXXX 5077
             F  YGD +FGYR  D   R + R RNV F  ++ V   +R  V  D             
Sbjct: 646  FFIGYGDEKFGYRFWDEQNRKIIRSRNVIF--NEQVMYKDRSTVTSDVTEIDQKKSEFVN 703

Query: 5078 XXXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKS 5257
                         EEDK++     S+  LS PV                           
Sbjct: 704  LDELNESTVQKGGEEDKENVN---SQVDLSTPV--------------------------- 733

Query: 5258 SEKQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQ 5434
               ++R S R   P  RY P   Y+LLTD G  E Y EA    +  +W   +++EM SL 
Sbjct: 734  --AEVRRSSRNIRPPQRYSPVLNYLLLTDGGKPECYDEALQDENSSKWELAMKDEMDSLL 791

Query: 5435 KNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLI 5614
             N T+EL  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ G+++ EIFS +
Sbjct: 792  GNQTWELTELPVGKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTEIFSPV 850

Query: 5615 VKMTSIRLVLGLVASLDLELEQ 5680
            VKM++IRLVLG+V + +L LEQ
Sbjct: 851  VKMSTIRLVLGMVXAENLHLEQ 872


>CAN61548.1 hypothetical protein VITISV_043524 [Vitis vinifera]
          Length = 1535

 Score =  348 bits (892), Expect = 7e-94
 Identities = 236/627 (37%), Positives = 319/627 (50%), Gaps = 9/627 (1%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G   +V + + S    + +G++ +    G    L+ VRH+ DL+ +LI     + EG  +
Sbjct: 576  GDFGKVYLADGSXLDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAI 635

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVE-DHQAALWHRRLGHMSEK 4183
             F GG  K+TKGA V+ +GK   TLY T        +I+V +     +LWHRRLGHMSEK
Sbjct: 636  LFVGGTWKVTKGARVLARGKKTGTLYMTSCP---RDTIAVADASTDTSLWHRRLGHMSEK 692

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSF-KTRSKVKPDVLQLIHSDICVPFEV 4360
            G ++LL KG +   K      C+SC  GKQ++VSF KT    K + L+L+H+D+  P  V
Sbjct: 693  GMKMLLSKGKLPELKSIDFDMCESCILGKQKKVSFLKTGRTPKAEKLELVHTDLWGPSPV 752

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
            ASLGG+RY++TFIDD+SRKVW Y +K K  VF  F K+ AMVE ET  K+KCL +DNGGE
Sbjct: 753  ASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGE 812

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y    F +YC    IR E+  PGTP  NG+ ERMNR + E+ R       + K       
Sbjct: 813  YIDGGFSEYCAAQXIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKIFWADAV 872

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                            F    E    +             S        R KLD K+  C
Sbjct: 873  STAAYLINRGPSVPMEFXLPEEVWSGKEVKFSHLKVFXCVSYVHIDSDARSKLDAKSKIC 932

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXX 5080
             F  YGD +FGYR  D   R + R RNV F  ++ V   +R  V                
Sbjct: 933  FFIGYGDEKFGYRFWDEQNRKIIRSRNVIF--NEQVMYKDRLTV---------------- 974

Query: 5081 XXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSS 5260
                    +SD  E  Q   E  +            L +L   +   G GE+D     S 
Sbjct: 975  --------TSDVTEIDQKKSEFVN------------LDELTESTVQKG-GEEDKENVNSK 1013

Query: 5261 EK------QIRMSDR-IRHPSFRYPTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEE 5419
                    ++R S R IR P    P   Y+LLTD G+ E Y+EA    +  +W   +++E
Sbjct: 1014 VDLRTPVVEVRRSSRNIRLPQRYSPVLNYLLLTDGGEPECYNEALQDENSSKWELAMKDE 1073

Query: 5420 MSSLQKNDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDE 5599
            M SL  N T+EL  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ G+++ E
Sbjct: 1074 MDSLLGNXTWELTELPVGKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIDYTE 1132

Query: 5600 IFSLIVKMTSIRLVLGLVASLDLELEQ 5680
            IFS +VKM++IRLVLG+VA  +L LEQ
Sbjct: 1133 IFSPVVKMSTIRLVLGMVAVENLHLEQ 1159


>CAN67882.1 hypothetical protein VITISV_022356 [Vitis vinifera]
          Length = 1299

 Score =  341 bits (874), Expect(2) = 2e-93
 Identities = 228/621 (36%), Positives = 309/621 (49%), Gaps = 3/621 (0%)
 Frame = +2

Query: 3827 GRLVRVNMGNFSFSRTIRIGNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYL 4006
            G   +V + + S    + +G++ +    G    L+ VRH+ DL+ +LI     + EG  +
Sbjct: 309  GDFGKVYLADGSALDVVGLGDVRISLPNGSVWLLEKVRHIPDLRRNLISVGQLDDEGHAI 368

Query: 4007 DFGGGKCKITKGALVIVQGKLFRTLYKTRIKVLKGGSISVVE-DHQAALWHRRLGHMSEK 4183
             F GG  K+TKGA V+ +GK   TL  T        +I+V +     +LWHRRLGHMSEK
Sbjct: 369  LFVGGTWKVTKGARVLARGKKTDTLNMTSCP---RDTIAVADASTDTSLWHRRLGHMSEK 425

Query: 4184 GFQLLLKKGLISFGKDTSLSSCDSCQTGKQQQVSF-KTRSKVKPDVLQLIHSDICVPFEV 4360
              ++LL KG +   K      C+SC  GKQ++ SF KT    K + L+L+H+D+  P  V
Sbjct: 426  WMKMLLSKGKLPELKSIDFDMCESCILGKQKKASFLKTGRTPKAEKLELVHTDLWGPSPV 485

Query: 4361 ASLGGNRYFVTFIDDTSRKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGE 4540
            ASLGG+RY++TFIDD+SRKVW Y +K K  VF  F K+ AMVE ET  K+KCL +DNGGE
Sbjct: 486  ASLGGSRYYITFIDDSSRKVWVYFLKNKSDVFVTFKKWKAMVETETGLKVKCLRSDNGGE 545

Query: 4541 YTSREFQDYCMQYGIRHERKKPGTPHHNGIVERMNRAIVEKVRYHIEDCKVAKDILGQGS 4720
            Y    F +YC   GIR E+  PGTP  NG+ ERMNR + E+ R       + K       
Sbjct: 546  YIDGGFSEYCAAQGIRMEKTIPGTPQQNGVAERMNRTLNERARSMRLHAGLPKTFWADVV 605

Query: 4721 EYCLLXXXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPC 4900
                            F    E    +             S        R KLD K+  C
Sbjct: 606  STTTYLINRGPSVPMEFRLPEEVWSGKEVKFSHLKVFCCVSYVHIDSDARSKLDAKSKIC 665

Query: 4901 IFFSYGD*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXX 5080
             F  YGD +FGYR  D   R + R RNV F E                            
Sbjct: 666  FFIGYGDEKFGYRFWDEQNRKIIRSRNVIFNE---------------------------- 697

Query: 5081 XXXXXQVQSSDNEEDKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSS 5260
                 QV   D      D  E   +    V + +   S +  + E            ++ 
Sbjct: 698  -----QVMYKDRLTVTSDVTEIDQKKSEFVNLDELTESTVQKRGEEDKENVNSKVDLRTP 752

Query: 5261 EKQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQK 5437
              ++R S R   P  RY P   Y+LLTD G+ E Y+EA    +  +W   +++EM SL  
Sbjct: 753  IVEVRRSSRNIRPPQRYSPVLNYLLLTDGGEPECYNEALQDENSSKWELAMKDEMDSLLG 812

Query: 5438 NDTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIV 5617
            N T+EL  L  G++AL NKWVYR+  + D S  RYKA+LVVKGF Q+ G+ + EIFS +V
Sbjct: 813  NQTWELTELPVGKKALHNKWVYRIKNEHDGSK-RYKARLVVKGFQQKEGIGYIEIFSSVV 871

Query: 5618 KMTSIRLVLGLVASLDLELEQ 5680
            KM++IRLVLG+VA  +L LEQ
Sbjct: 872  KMSTIRLVLGMVAVENLHLEQ 892



 Score = 34.3 bits (77), Expect(2) = 2e-93
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 3732 LHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            L V+    +WV+D  AS+H +P +E   +Y+ GD
Sbjct: 277  LAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGD 310


>KYP59064.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1300

 Score =  335 bits (860), Expect(3) = 9e-93
 Identities = 217/620 (35%), Positives = 320/620 (51%), Gaps = 21/620 (3%)
 Frame = +2

Query: 3884 GNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYLDFGGGKCKITKGALVIVQG 4063
            G++ ++ + G   TL+DVRH+  L+ +LI     + +G ++ FG GK K++KGA+ + +G
Sbjct: 315  GDVRIKYANGSCWTLRDVRHIPGLKRNLISVGQLDSDGFHIMFGDGKWKVSKGAMTLARG 374

Query: 4064 KLFRTLYK---TRIKVLKGGSISVVEDHQAALWHRRLGHMSEKGFQLLLKKGLISFGKDT 4234
                TLY    +   +   G++S     QA LWH RLGHMSEKG  +L   G +   K  
Sbjct: 375  LKSGTLYMAGGSNPNIPFAGAVS-----QADLWHNRLGHMSEKGMSVLKSIGRLPELKSV 429

Query: 4235 SLSSCDSCQTGKQQQVSFKTRSKV-KPDVLQLIHSDICVPFEVASLGGNRYFVTFIDDTS 4411
             +  C+ C  GKQ++VSF T  +  K   L+L+H+D+  P  V SLGG+ Y++TF+DD +
Sbjct: 430  DVGLCEHCVLGKQKRVSFMTTGRTPKMKKLELVHTDLWGPAPVISLGGSTYYMTFVDDCT 489

Query: 4412 RKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEYTSREFQDYCMQYGIRH 4591
            RKVW Y +K K   F  F ++ A+VE ET  ++KCL +DNGGEY S   ++YC   GIR 
Sbjct: 490  RKVWVYFLKRKSDAFDTFRRWRALVENETGLQVKCLRSDNGGEYNSEAIKEYCADRGIRM 549

Query: 4592 ERKKPGTPHHNGIVERMNRAIVEKVR-----------YHIEDCKVAKDILGQGSEYCLLX 4738
            ++  PGTP  NG+ ERMNR + E+ R           +  E    A  ++ +G     L 
Sbjct: 550  QKTIPGTPQQNGVAERMNRTLNERARCMRLKSGLPKMFWAEAVSTAAFLINRGPS-VPLN 608

Query: 4739 XXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPCIFFSYG 4918
                     G       + T GC            L       R KLD K++ C F  YG
Sbjct: 609  NRIPEEVWSGKEVDLSFLRTFGC------------LAYVLNDDRTKLDAKSIKCTFIGYG 656

Query: 4919 D*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXXXXXXXQ 5098
              +FGY+  D + R + R RNV F E        +D  E    G                
Sbjct: 657  TDEFGYKFWDDLNRKIIRSRNVVFDEGMMY----KDKKESLNDGKMEKEVVGLDISNTRI 712

Query: 5099 VQSSDNEE-----DKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSSE 5263
             + +DN+      ++ D  E+ SE     P P        P    F         E  + 
Sbjct: 713  PRPADNDSVGVQMEETDQTEEESE-----PEP--------PPPFEF---RATRETESRTP 756

Query: 5264 KQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQKN 5440
              +    R R    RY P+  Y+LLTD G+ E Y EA     + +W   + +EM SL+KN
Sbjct: 757  LALGRVTRKRRAPERYSPSLYYLLLTDCGEPECYAEAVNDDHKSKWELAMDDEMCSLKKN 816

Query: 5441 DTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIVK 5620
            DT+EL  L +G++AL+N+WVYR+ +++     RYKA+LVVKGF QR G++F ++F+ +VK
Sbjct: 817  DTWELCQLPQGKKALQNRWVYRV-KEESDGKKRYKARLVVKGFQQRYGIDFTDVFTPVVK 875

Query: 5621 MTSIRLVLGLVASLDLELEQ 5680
            +T+IRLVL +VA+ +LEL+Q
Sbjct: 876  ITTIRLVLSMVAAENLELQQ 895



 Score = 31.2 bits (69), Expect(3) = 9e-93
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 3714 TIQEQCLHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            T+    L V     +WV+D  AS+H+   ++    Y  GD
Sbjct: 258  TVDALLLSVSSSSDDWVMDSGASFHSCSRRDIMEPYTTGD 297



 Score = 28.1 bits (61), Expect(3) = 9e-93
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 3460 RGTDRRNDRGRSQSRGESQDHXXXXXXXXXXXXXXXHCGKPGHFKNDCK 3606
            R   R   RGRS+S+G ++                 +C KPGH K++C+
Sbjct: 201  RPDTRGKFRGRSKSKGRNKGKKEMVCW---------NCEKPGHMKSECR 240


>KYP32301.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1133

 Score =  335 bits (860), Expect(3) = 9e-93
 Identities = 217/620 (35%), Positives = 320/620 (51%), Gaps = 21/620 (3%)
 Frame = +2

Query: 3884 GNIYVQTSVGCTLTLKDVRHVSDLQLSLIFGSCFNREGCYLDFGGGKCKITKGALVIVQG 4063
            G++ ++ + G   TL+DVRH+  L+ +LI     + +G ++ FG GK K++KGA+ + +G
Sbjct: 296  GDVRIKYANGSCWTLRDVRHIPGLKRNLISVGQLDSDGFHIMFGDGKWKVSKGAMTLARG 355

Query: 4064 KLFRTLYK---TRIKVLKGGSISVVEDHQAALWHRRLGHMSEKGFQLLLKKGLISFGKDT 4234
                TLY    +   +   G++S     QA LWH RLGHMSEKG  +L   G +   K  
Sbjct: 356  LKSGTLYMAGGSNPNIPFAGAVS-----QADLWHNRLGHMSEKGMSVLKSIGRLPELKSV 410

Query: 4235 SLSSCDSCQTGKQQQVSFKTRSKV-KPDVLQLIHSDICVPFEVASLGGNRYFVTFIDDTS 4411
             +  C+ C  GKQ++VSF T  +  K   L+L+H+D+  P  V SLGG+ Y++TF+DD +
Sbjct: 411  DVGLCEHCVLGKQKRVSFMTTGRTPKMKKLELVHTDLWGPAPVISLGGSTYYMTFVDDCT 470

Query: 4412 RKVWAYLVKTKDHVFQYF*KFHAMVERETKKKLKCLCTDNGGEYTSREFQDYCMQYGIRH 4591
            RKVW Y +K K   F  F ++ A+VE ET  ++KCL +DNGGEY S   ++YC   GIR 
Sbjct: 471  RKVWVYFLKRKSDAFDTFRRWRALVENETGLQVKCLRSDNGGEYNSEAIKEYCADRGIRM 530

Query: 4592 ERKKPGTPHHNGIVERMNRAIVEKVR-----------YHIEDCKVAKDILGQGSEYCLLX 4738
            ++  PGTP  NG+ ERMNR + E+ R           +  E    A  ++ +G     L 
Sbjct: 531  QKTIPGTPQQNGVAERMNRTLNERARCMRLKSGLPKMFWAEAVSTAAFLINRGPS-VPLN 589

Query: 4739 XXXXXXXXFGF*YT*EGMDTQGCFLCSSTSIWVKSLCTCSKKKRQKLDNKAVPCIFFSYG 4918
                     G       + T GC            L       R KLD K++ C F  YG
Sbjct: 590  NRIPEEVWSGKEVDLSFLRTFGC------------LAYVLNDDRTKLDAKSIKCTFIGYG 637

Query: 4919 D*QFGYRL*DHVKRTMSRHRNVAFCESQTVT*PERDDVEDAGLGXXXXXXXXXXXXXXXQ 5098
              +FGY+  D + R + R RNV F E        +D  E    G                
Sbjct: 638  TDEFGYKFWDDLNRKIIRSRNVVFDEGMMY----KDKKESLNDGKMEKEVVGLDISNTRI 693

Query: 5099 VQSSDNEE-----DKQDHPEQ*SESMLSVPVPDA*LSDLDPQSENFG*GEKDHHQEKSSE 5263
             + +DN+      ++ D  E+ SE     P P        P    F         E  + 
Sbjct: 694  PRPADNDSVGVQMEETDQTEEESE-----PEP--------PPPFEF---RATRETESRTP 737

Query: 5264 KQIRMSDRIRHPSFRY-PTSQYILLTDKGDSETYHEAQTHRDRVQWHQVIQEEMSSLQKN 5440
              +    R R    RY P+  Y+LLTD G+ E Y EA     + +W   + +EM SL+KN
Sbjct: 738  LALGRVTRKRRAPERYSPSLYYLLLTDCGEPECYAEAVNDDHKSKWELAMDDEMCSLKKN 797

Query: 5441 DTYELVALHKGRRALKNKWVYRM*RDDDKSNIRYKAKLVVKGFGQRPGVEFDEIFSLIVK 5620
            DT+EL  L +G++AL+N+WVYR+ +++     RYKA+LVVKGF QR G++F ++F+ +VK
Sbjct: 798  DTWELCQLPQGKKALQNRWVYRV-KEESDGKKRYKARLVVKGFQQRYGIDFTDVFTPVVK 856

Query: 5621 MTSIRLVLGLVASLDLELEQ 5680
            +T+IRLVL +VA+ +LEL+Q
Sbjct: 857  ITTIRLVLSMVAAENLELQQ 876



 Score = 31.2 bits (69), Expect(3) = 9e-93
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 3714 TIQEQCLHVEDDDSEWVVDIAASYHASPSKEFFTSYMRGD 3833
            T+    L V     +WV+D  AS+H+   ++    Y  GD
Sbjct: 239  TVDALLLSVSSSSDDWVMDSGASFHSCSRRDIMEPYTTGD 278



 Score = 28.1 bits (61), Expect(3) = 9e-93
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 3460 RGTDRRNDRGRSQSRGESQDHXXXXXXXXXXXXXXXHCGKPGHFKNDCK 3606
            R   R   RGRS+S+G ++                 +C KPGH K++C+
Sbjct: 182  RPDTRGKFRGRSKSKGRNKGKKEMVCW---------NCEKPGHMKSECR 221