BLASTX nr result
ID: Alisma22_contig00009717
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Alisma22_contig00009717 (1211 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_020111141.1 RNA polymerase II transcription factor B subunit ... 129 2e-33 XP_007210944.1 hypothetical protein PRUPE_ppa024121mg [Prunus pe... 127 7e-33 XP_008791280.1 PREDICTED: RNA polymerase II transcription factor... 126 1e-32 KQL13406.1 hypothetical protein SETIT_023901mg [Setaria italica] 125 4e-32 XP_010231853.1 PREDICTED: general transcription factor IIH subun... 125 4e-32 XP_006477302.1 PREDICTED: general transcription factor IIH subun... 125 4e-32 ONK80044.1 uncharacterized protein A4U43_C01F13170 [Asparagus of... 124 7e-32 XP_009399492.1 PREDICTED: RNA polymerase II transcription factor... 124 7e-32 XP_008370834.1 PREDICTED: RNA polymerase II transcription factor... 124 7e-32 KQK08060.1 hypothetical protein BRADI_2g39330, partial [Brachypo... 126 9e-32 XP_015869009.1 PREDICTED: RNA polymerase II transcription factor... 124 1e-31 XP_002266482.1 PREDICTED: RNA polymerase II transcription factor... 124 1e-31 XP_009371553.1 PREDICTED: RNA polymerase II transcription factor... 123 2e-31 XP_004298704.1 PREDICTED: general transcription factor IIH subun... 123 2e-31 XP_011626046.1 PREDICTED: uncharacterized protein LOC105421215 [... 123 3e-31 XP_002889933.1 hypothetical protein ARALYDRAFT_471390 [Arabidops... 123 3e-31 XP_010533744.1 PREDICTED: RNA polymerase II transcription factor... 122 4e-31 XP_006368720.1 hypothetical protein POPTR_0001s08090g [Populus t... 122 4e-31 NP_172702.1 Nucleotide excision repair, TFIIH, subunit TTDA [Ara... 122 4e-31 XP_015638314.1 PREDICTED: general transcription factor IIH subun... 122 5e-31 >XP_020111141.1 RNA polymerase II transcription factor B subunit 5 [Ananas comosus] XP_020111142.1 RNA polymerase II transcription factor B subunit 5 [Ananas comosus] XP_020111144.1 RNA polymerase II transcription factor B subunit 5 [Ananas comosus] Length = 70 Score = 129 bits (323), Expect = 2e-33 Identities = 58/70 (82%), Positives = 67/70 (95%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKGLFISCDIPMAQFI+N N S+PPS+KFI+H+LDSTH+FVQPH+ EMIRSKI+EF Sbjct: 1 MVNAIKGLFISCDIPMAQFIVNLNNSMPPSEKFIVHMLDSTHIFVQPHVAEMIRSKIAEF 60 Query: 477 RDQNTYEKPA 506 RDQN+YEKPA Sbjct: 61 RDQNSYEKPA 70 >XP_007210944.1 hypothetical protein PRUPE_ppa024121mg [Prunus persica] XP_007211160.1 hypothetical protein PRUPE_ppb011951mg [Prunus persica] XP_008238661.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Prunus mume] XP_008238662.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Prunus mume] XP_016651362.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Prunus mume] ONI06790.1 hypothetical protein PRUPE_5G081100 [Prunus persica] Length = 70 Score = 127 bits (319), Expect = 7e-33 Identities = 58/69 (84%), Positives = 64/69 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNA KGLF+SCDIPMAQFIINYN +LPPSQ+FIIH+LDSTH+FVQPH EMIRS ISEF Sbjct: 1 MVNATKGLFVSCDIPMAQFIINYNNTLPPSQQFIIHVLDSTHLFVQPHAAEMIRSAISEF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_008791280.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Phoenix dactylifera] Length = 70 Score = 126 bits (317), Expect = 1e-32 Identities = 58/70 (82%), Positives = 65/70 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKGL ISCD+PMAQFI+N N SLP SQ+FI+H+LDSTHMFVQPH+ EMIRSKI+EF Sbjct: 1 MVNAIKGLLISCDVPMAQFIVNLNASLPASQRFIVHMLDSTHMFVQPHVAEMIRSKIAEF 60 Query: 477 RDQNTYEKPA 506 RDQNTYEKPA Sbjct: 61 RDQNTYEKPA 70 >KQL13406.1 hypothetical protein SETIT_023901mg [Setaria italica] Length = 70 Score = 125 bits (314), Expect = 4e-32 Identities = 57/69 (82%), Positives = 64/69 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKGLFISCDIPMAQFIIN N S+PPS++FI+H+LD THMFVQPH+ EMIRSKI EF Sbjct: 1 MVNAIKGLFISCDIPMAQFIINLNASMPPSERFIVHMLDPTHMFVQPHVAEMIRSKIGEF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_010231853.1 PREDICTED: general transcription factor IIH subunit 5 [Brachypodium distachyon] Length = 70 Score = 125 bits (314), Expect = 4e-32 Identities = 56/69 (81%), Positives = 65/69 (94%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKGLFISCD+PMAQFI+N N S+P S+KFI+H+LD THMFVQPH+GEMIRSKI+EF Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_006477302.1 PREDICTED: general transcription factor IIH subunit 5 [Citrus sinensis] XP_006477303.1 PREDICTED: general transcription factor IIH subunit 5 [Citrus sinensis] XP_006477304.1 PREDICTED: general transcription factor IIH subunit 5 [Citrus sinensis] KDO63733.1 hypothetical protein CISIN_1g0351902mg [Citrus sinensis] KDO63734.1 hypothetical protein CISIN_1g0351902mg [Citrus sinensis] KDO63735.1 hypothetical protein CISIN_1g0351902mg [Citrus sinensis] Length = 70 Score = 125 bits (314), Expect = 4e-32 Identities = 60/70 (85%), Positives = 65/70 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKGLFISCDIPMAQFIIN N S+P SQKFIIHILDSTH+FVQP+M EMIRS I+EF Sbjct: 1 MVNAIKGLFISCDIPMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEF 60 Query: 477 RDQNTYEKPA 506 RDQN+YEKPA Sbjct: 61 RDQNSYEKPA 70 >ONK80044.1 uncharacterized protein A4U43_C01F13170 [Asparagus officinalis] Length = 70 Score = 124 bits (312), Expect = 7e-32 Identities = 57/70 (81%), Positives = 65/70 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKGLFISCD+PMAQ IIN N SLP SQKFI+H+LDSTHMFVQPH+ EMI++KI+E+ Sbjct: 1 MVNAIKGLFISCDVPMAQLIINMNSSLPASQKFIVHMLDSTHMFVQPHVAEMIQTKIAEY 60 Query: 477 RDQNTYEKPA 506 RDQNTYEKPA Sbjct: 61 RDQNTYEKPA 70 >XP_009399492.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Musa acuminata subsp. malaccensis] Length = 70 Score = 124 bits (312), Expect = 7e-32 Identities = 56/69 (81%), Positives = 65/69 (94%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNA+KGL ISCDIPM QFII++N SLPPSQ+FI+H+LD+THMFVQPH+ EMIRSKISEF Sbjct: 1 MVNAMKGLLISCDIPMTQFIISFNASLPPSQRFILHVLDNTHMFVQPHVAEMIRSKISEF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_008370834.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_008388382.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_008388383.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_008388384.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_008388385.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_008388386.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_008388387.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_009340342.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] XP_009340345.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] XP_009340346.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] XP_009340394.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] XP_009340396.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] XP_009340397.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] XP_009349405.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] XP_017191983.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_017191984.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_017191985.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Malus domestica] XP_018499308.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] XP_018499310.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Pyrus x bretschneideri] Length = 70 Score = 124 bits (312), Expect = 7e-32 Identities = 57/69 (82%), Positives = 64/69 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNA+KGLFISCDIPMAQFIINY+ SLP SQ+FIIH+LDSTH+FVQPH EMIRS I+EF Sbjct: 1 MVNAVKGLFISCDIPMAQFIINYDNSLPASQRFIIHVLDSTHLFVQPHAAEMIRSAIAEF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >KQK08060.1 hypothetical protein BRADI_2g39330, partial [Brachypodium distachyon] Length = 121 Score = 126 bits (316), Expect = 9e-32 Identities = 56/70 (80%), Positives = 66/70 (94%) Frame = +3 Query: 294 RMVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISE 473 +MVNAIKGLFISCD+PMAQFI+N N S+P S+KFI+H+LD THMFVQPH+GEMIRSKI+E Sbjct: 51 KMVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAE 110 Query: 474 FRDQNTYEKP 503 FRDQN+YEKP Sbjct: 111 FRDQNSYEKP 120 >XP_015869009.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Ziziphus jujuba] XP_015869010.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Ziziphus jujuba] Length = 70 Score = 124 bits (311), Expect = 1e-31 Identities = 58/70 (82%), Positives = 63/70 (90%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNA KGLFISCD+PMAQFIIN N +LP SQKFIIHILDSTHMFVQPH EMIRS +S+F Sbjct: 1 MVNATKGLFISCDVPMAQFIINLNSTLPASQKFIIHILDSTHMFVQPHAAEMIRSAVSDF 60 Query: 477 RDQNTYEKPA 506 RDQN+YEKPA Sbjct: 61 RDQNSYEKPA 70 >XP_002266482.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Vitis vinifera] XP_010661766.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Vitis vinifera] XP_019081172.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Vitis vinifera] CBI34818.3 unnamed protein product, partial [Vitis vinifera] Length = 70 Score = 124 bits (310), Expect = 1e-31 Identities = 58/70 (82%), Positives = 64/70 (91%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNA KGLFISCDIPMAQFIIN N S+P SQKFIIH+LDSTH+FVQPH+ EMIRS ISEF Sbjct: 1 MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60 Query: 477 RDQNTYEKPA 506 R+QN+YEKPA Sbjct: 61 REQNSYEKPA 70 >XP_009371553.1 PREDICTED: RNA polymerase II transcription factor B subunit 5-like [Pyrus x bretschneideri] Length = 70 Score = 123 bits (309), Expect = 2e-31 Identities = 56/69 (81%), Positives = 64/69 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNA+KGLFISCDIPMAQFIINY+ SLP SQ+FIIH+LDSTH+FVQPH EMIR+ I+EF Sbjct: 1 MVNAVKGLFISCDIPMAQFIINYDNSLPASQRFIIHVLDSTHLFVQPHAAEMIRNAIAEF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_004298704.1 PREDICTED: general transcription factor IIH subunit 5 [Fragaria vesca subsp. vesca] XP_011463781.1 PREDICTED: general transcription factor IIH subunit 5 [Fragaria vesca subsp. vesca] Length = 70 Score = 123 bits (309), Expect = 2e-31 Identities = 57/69 (82%), Positives = 62/69 (89%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNA +GLFISCDIPMAQFIINYN SLP SQKFIIH+LD TH+FVQPH EMI+S ISEF Sbjct: 1 MVNATRGLFISCDIPMAQFIINYNNSLPQSQKFIIHVLDGTHLFVQPHAAEMIKSAISEF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_011626046.1 PREDICTED: uncharacterized protein LOC105421215 [Amborella trichopoda] XP_011626047.1 PREDICTED: uncharacterized protein LOC105421215 [Amborella trichopoda] Length = 70 Score = 123 bits (308), Expect = 3e-31 Identities = 58/70 (82%), Positives = 64/70 (91%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKGLFISCD+PMAQFI + N SLPPSQKFIIH+LD+THMFVQ H GEMIR+KISEF Sbjct: 1 MVNAIKGLFISCDVPMAQFIASLNASLPPSQKFIIHMLDNTHMFVQAHAGEMIRNKISEF 60 Query: 477 RDQNTYEKPA 506 RD N+YEKPA Sbjct: 61 RDLNSYEKPA 70 >XP_002889933.1 hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata] EFH66192.1 hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata] Length = 71 Score = 123 bits (308), Expect = 3e-31 Identities = 55/69 (79%), Positives = 64/69 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKG+FISCDIPM QFI+N N S+PPSQKFIIH+LDSTH+FVQPH+ +MIRS IS+F Sbjct: 1 MVNAIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_010533744.1 PREDICTED: RNA polymerase II transcription factor B subunit 5 [Tarenaya hassleriana] Length = 70 Score = 122 bits (307), Expect = 4e-31 Identities = 58/69 (84%), Positives = 63/69 (91%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKG+FISCDIPMAQFIIN N S+P SQKFIIHILDSTHMFVQPH+ MIRS I+EF Sbjct: 1 MVNAIKGVFISCDIPMAQFIINLNNSMPASQKFIIHILDSTHMFVQPHVEHMIRSAIAEF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_006368720.1 hypothetical protein POPTR_0001s08090g [Populus trichocarpa] XP_006368721.1 hypothetical protein POPTR_0001s08090g [Populus trichocarpa] XP_006368722.1 hypothetical protein POPTR_0001s08090g [Populus trichocarpa] ERP65289.1 hypothetical protein POPTR_0001s08090g [Populus trichocarpa] ERP65290.1 hypothetical protein POPTR_0001s08090g [Populus trichocarpa] ERP65291.1 hypothetical protein POPTR_0001s08090g [Populus trichocarpa] Length = 70 Score = 122 bits (307), Expect = 4e-31 Identities = 58/70 (82%), Positives = 64/70 (91%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNA KGLFISCDIPMAQFIIN N SLP SQKFIIHILDSTHMFVQPH+ +MIRS IS+F Sbjct: 1 MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60 Query: 477 RDQNTYEKPA 506 R+QN+YEKP+ Sbjct: 61 REQNSYEKPS 70 >NP_172702.1 Nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis thaliana] NP_001321468.1 Nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis thaliana] Q6NNM0.1 RecName: Full=RNA polymerase II transcription factor B subunit 5; AltName: Full=General transcription and DNA repair factor IIH subunit TFB5; Short=AtTFB5; Short=TFIIH subunit TFB5 AAR24163.1 At1g12400 [Arabidopsis thaliana] AAR92302.1 At1g12400 [Arabidopsis thaliana] AEE28875.1 Nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis thaliana] OAP18977.1 hypothetical protein AXX17_AT1G12810 [Arabidopsis thaliana] ANM59075.1 Nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis thaliana] Length = 71 Score = 122 bits (307), Expect = 4e-31 Identities = 54/69 (78%), Positives = 64/69 (92%) Frame = +3 Query: 297 MVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMIRSKISEF 476 MVNAIKG+F+SCDIPM QFI+N N S+PPSQKFIIH+LDSTH+FVQPH+ +MIRS IS+F Sbjct: 1 MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60 Query: 477 RDQNTYEKP 503 RDQN+YEKP Sbjct: 61 RDQNSYEKP 69 >XP_015638314.1 PREDICTED: general transcription factor IIH subunit 5 [Oryza sativa Japonica Group] XP_015638315.1 PREDICTED: general transcription factor IIH subunit 5 [Oryza sativa Japonica Group] EEC78671.1 hypothetical protein OsI_18797 [Oryza sativa Indica Group] EEE62657.1 hypothetical protein OsJ_17460 [Oryza sativa Japonica Group] BAS92697.1 Os05g0198700 [Oryza sativa Japonica Group] Length = 81 Score = 122 bits (307), Expect = 5e-31 Identities = 57/76 (75%), Positives = 64/76 (84%) Frame = +3 Query: 276 CSFYHIRMVNAIKGLFISCDIPMAQFIINYNESLPPSQKFIIHILDSTHMFVQPHMGEMI 455 CS MVNAIKGLFISCD+PMAQFI+N N S+P S KFI+H+LD THMFVQPH+ EMI Sbjct: 5 CSPKSRNMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMI 64 Query: 456 RSKISEFRDQNTYEKP 503 R KISEFRDQN+YEKP Sbjct: 65 RGKISEFRDQNSYEKP 80