BLASTX nr result
ID: Alisma22_contig00009522
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00009522
(253 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABI34342.1 Polyprotein, putative [Solanum demissum] 101 4e-23
ABI34329.1 Integrase core domain containing protein [Solanum dem... 98 6e-22
KYP46624.1 Retrovirus-related Pol polyprotein from transposon TN... 94 9e-22
AOZ57167.1 integrase, partial [Coccinia grandis] 92 3e-21
KYP71833.1 Retrovirus-related Pol polyprotein from transposon TN... 94 9e-21
KYP44825.1 Retrovirus-related Pol polyprotein from transposon TN... 94 1e-20
KYP74957.1 Retrovirus-related Pol polyprotein from transposon TN... 93 3e-20
CAN63081.1 hypothetical protein VITISV_016842 [Vitis vinifera] 92 6e-20
CAN71436.1 hypothetical protein VITISV_039529 [Vitis vinifera] 92 9e-20
AEJ72555.1 putative retroelement polyprotein [Malus domestica] 92 9e-20
CAN80320.1 hypothetical protein VITISV_034560 [Vitis vinifera] 92 9e-20
CAN61929.1 hypothetical protein VITISV_014855 [Vitis vinifera] 92 9e-20
CAN62394.1 hypothetical protein VITISV_021305 [Vitis vinifera] 92 9e-20
CAN75041.1 hypothetical protein VITISV_027174 [Vitis vinifera] 92 9e-20
CAN74430.1 hypothetical protein VITISV_010987 [Vitis vinifera] 92 9e-20
CAN63955.1 hypothetical protein VITISV_034255, partial [Vitis vi... 91 1e-19
CAN81139.1 hypothetical protein VITISV_018760 [Vitis vinifera] 91 1e-19
KYP55750.1 Retrovirus-related Pol polyprotein from transposon TN... 91 2e-19
CAN75516.1 hypothetical protein VITISV_021838 [Vitis vinifera] 91 2e-19
CAN74101.1 hypothetical protein VITISV_039542 [Vitis vinifera] 91 2e-19
>ABI34342.1 Polyprotein, putative [Solanum demissum]
Length = 1054
Score = 101 bits (251), Expect = 4e-23
Identities = 44/79 (55%), Positives = 57/79 (72%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF+SF+DD+SR TW++L+K R + SI K F EIQ QF +I+TF+SDNALEY+
Sbjct: 319 GFRYFVSFIDDYSRCTWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSS 378
Query: 59 AMNEFCSSVGMIHHTSCPH 3
EF S G+IH TSCP+
Sbjct: 379 QFQEFMSHQGIIHQTSCPY 397
>ABI34329.1 Integrase core domain containing protein [Solanum demissum]
Length = 1775
Score = 97.8 bits (242), Expect = 6e-22
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF+SF+DD+S+ TW++L+K R + SI K F EIQ QF +I+TF+SDNALEY+
Sbjct: 558 GFRYFVSFIDDYSKCTWVFLMKDRSELFSIFKSFFAEIQNQFGVSIRTFRSDNALEYLSS 617
Query: 59 AMNEFCSSVGMIHHTSCPH 3
EF + G+IH T+CP+
Sbjct: 618 QFREFMTHQGIIHQTTCPY 636
>KYP46624.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 263
Score = 94.4 bits (233), Expect = 9e-22
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+D+FSR TW+YL+K R +LSI F EI+ QF IK FQSDNA EY
Sbjct: 59 GFRYFVTFIDEFSRCTWVYLMKDRSKLLSIFMSFFNEIKNQFGRLIKIFQSDNAKEYFSS 118
Query: 59 AMNEFCSSVGMIHHTSCPH 3
++ F SS G++H ++CPH
Sbjct: 119 ELSSFLSSQGVLHQSTCPH 137
>AOZ57167.1 integrase, partial [Coccinia grandis]
Length = 218
Score = 92.0 bits (227), Expect = 3e-21
Identities = 40/80 (50%), Positives = 56/80 (70%)
Frame = -3
Query: 248 SYNGFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEY 69
S GF YF++FVDD+SRMTW+YL+K+R +LS +FH EI+ QFN +IKT ++DNA EY
Sbjct: 61 SQTGFRYFVTFVDDYSRMTWLYLMKNRSELLSHFCNFHAEIRTQFNTSIKTLRTDNAGEY 120
Query: 68 VQKAMNEFCSSVGMIHHTSC 9
+ + G+IH +SC
Sbjct: 121 FSHVLGSYLCEHGIIHQSSC 140
>KYP71833.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 612
Score = 94.4 bits (233), Expect = 9e-21
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+D+FSR TW+YL+K R +LSI F EIQ QF IK F+SDNA EY
Sbjct: 389 GFRYFVTFIDEFSRCTWVYLMKDRSELLSIFVSFFNEIQNQFGKTIKIFRSDNAKEYFSL 448
Query: 59 AMNEFCSSVGMIHHTSCPH 3
++ F SS G++H ++CPH
Sbjct: 449 ELSSFLSSQGVLHQSTCPH 467
>KYP44825.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1371
Score = 94.4 bits (233), Expect = 1e-20
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+D+FSR TW+YL+K R +LSI F EIQ QF IK F+SDNA EY
Sbjct: 513 GFRYFVTFIDEFSRCTWVYLMKDRSELLSIFVSFFNEIQNQFGKTIKIFRSDNAKEYFSL 572
Query: 59 AMNEFCSSVGMIHHTSCPH 3
++ F SS G++H ++CPH
Sbjct: 573 ELSSFLSSQGVLHQSTCPH 591
>KYP74957.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1122
Score = 92.8 bits (229), Expect = 3e-20
Identities = 40/79 (50%), Positives = 55/79 (69%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+D+FSR TW+YL+K R +LSI F EI+ QF IK F+SDNA EY
Sbjct: 839 GFRYFVTFIDEFSRCTWVYLMKDRSELLSIFMSFFNEIKNQFGRLIKIFRSDNAKEYFSS 898
Query: 59 AMNEFCSSVGMIHHTSCPH 3
++ F SS G++H ++CPH
Sbjct: 899 ELSSFLSSQGVLHQSTCPH 917
>CAN63081.1 hypothetical protein VITISV_016842 [Vitis vinifera]
Length = 1179
Score = 92.0 bits (227), Expect = 6e-20
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+DD+SR TW++L+K+R + SI + F+ EIQ QFN +I+ +SDNA EY
Sbjct: 442 GFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYAEIQTQFNISIRVLRSDNAREYFSA 501
Query: 59 AMNEFCSSVGMIHHTSCPH 3
F S G+IH +SC H
Sbjct: 502 PFTSFMSQYGIIHQSSCAH 520
>CAN71436.1 hypothetical protein VITISV_039529 [Vitis vinifera]
Length = 1169
Score = 91.7 bits (226), Expect = 9e-20
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = -3
Query: 248 SYNGFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEY 69
S G YF+ F+DD+SR +WI+ +KSR +LSI +F K ++ QF+ IKTF+SDNALEY
Sbjct: 479 SIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALEY 538
Query: 68 VQKAMNEFCSSVGMIHHTSCP 6
Q A S G IHH +CP
Sbjct: 539 TQHAFQALLHSYGTIHHLTCP 559
>AEJ72555.1 putative retroelement polyprotein [Malus domestica]
Length = 1249
Score = 91.7 bits (226), Expect = 9e-20
Identities = 37/80 (46%), Positives = 57/80 (71%)
Frame = -3
Query: 248 SYNGFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEY 69
S++GF YF++FVDDFSR TW+YLLKS++ V+++ + FH + QF+ +K +SDN EY
Sbjct: 509 SFDGFRYFVTFVDDFSRCTWLYLLKSKDEVINVFQEFHSLVTNQFSTQLKVLRSDNGTEY 568
Query: 68 VQKAMNEFCSSVGMIHHTSC 9
+ A ++ + G+IH TSC
Sbjct: 569 MSNAFAQYLTCHGIIHQTSC 588
>CAN80320.1 hypothetical protein VITISV_034560 [Vitis vinifera]
Length = 1261
Score = 91.7 bits (226), Expect = 9e-20
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = -3
Query: 248 SYNGFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEY 69
S G YF+ F+DD+SR +WI+ +KSR +LSI +F K ++ QF+ IKTF+SDNALEY
Sbjct: 463 SIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALEY 522
Query: 68 VQKAMNEFCSSVGMIHHTSCP 6
Q A S G IHH +CP
Sbjct: 523 TQHAFQALLHSYGTIHHPTCP 543
>CAN61929.1 hypothetical protein VITISV_014855 [Vitis vinifera]
Length = 1271
Score = 91.7 bits (226), Expect = 9e-20
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = -3
Query: 248 SYNGFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEY 69
S G YF+ F+DD+SR +WI+ +KSR +LSI +F K ++ QF+ IKTF+SDNALEY
Sbjct: 545 SIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALEY 604
Query: 68 VQKAMNEFCSSVGMIHHTSCP 6
Q A S G IHH +CP
Sbjct: 605 TQHAFQTLLHSYGTIHHLTCP 625
>CAN62394.1 hypothetical protein VITISV_021305 [Vitis vinifera]
Length = 1287
Score = 91.7 bits (226), Expect = 9e-20
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = -3
Query: 248 SYNGFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEY 69
S G YF+ F+DD+SR +WI+ +KSR +LSI +F K I+ QF+ IKTF+SDNALEY
Sbjct: 520 SIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMIETQFSKRIKTFRSDNALEY 579
Query: 68 VQKAMNEFCSSVGMIHHTSCP 6
Q A S G +HH +CP
Sbjct: 580 TQHAFQALLHSYGTVHHLTCP 600
>CAN75041.1 hypothetical protein VITISV_027174 [Vitis vinifera]
Length = 1381
Score = 91.7 bits (226), Expect = 9e-20
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = -3
Query: 248 SYNGFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEY 69
S G YF+ F+DD+SR +WI+ +KSR +LSI +F K ++ QF+ IKTF+SDNALEY
Sbjct: 553 SIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMVETQFSKRIKTFRSDNALEY 612
Query: 68 VQKAMNEFCSSVGMIHHTSCP 6
Q A S G IHH +CP
Sbjct: 613 TQHAFQXLLHSYGTIHHLTCP 633
>CAN74430.1 hypothetical protein VITISV_010987 [Vitis vinifera]
Length = 2471
Score = 91.7 bits (226), Expect = 9e-20
Identities = 41/81 (50%), Positives = 54/81 (66%)
Frame = -3
Query: 248 SYNGFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEY 69
S G YF+ F+DD+SR +WI+ +KSR +LSI +F K I+ QF+ IKTF+SDNALEY
Sbjct: 827 SIGGSRYFVIFIDDYSRYSWIFPMKSRSEILSIYNNFAKMIETQFSKRIKTFRSDNALEY 886
Query: 68 VQKAMNEFCSSVGMIHHTSCP 6
Q A S G +HH +CP
Sbjct: 887 TQHAFQALLHSYGTVHHLTCP 907
>CAN63955.1 hypothetical protein VITISV_034255, partial [Vitis vinifera]
Length = 1117
Score = 91.3 bits (225), Expect = 1e-19
Identities = 38/79 (48%), Positives = 54/79 (68%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+DD+SR TW++L+K+R + SI + F+ EIQ QFN +I+ +SDNA EY
Sbjct: 475 GFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYAEIQTQFNISIRVLRSDNAREYFST 534
Query: 59 AMNEFCSSVGMIHHTSCPH 3
F S G+IH +SC H
Sbjct: 535 PFTSFMSQHGIIHQSSCAH 553
>CAN81139.1 hypothetical protein VITISV_018760 [Vitis vinifera]
Length = 1403
Score = 91.3 bits (225), Expect = 1e-19
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+DD+SR TW++L+K+R + SI + F+ EIQ QFN +I+ +SDNA EY
Sbjct: 628 GFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKFYTEIQTQFNISIRVLRSDNAXEYFSA 687
Query: 59 AMNEFCSSVGMIHHTSCPH 3
F S G++H +SC H
Sbjct: 688 QFTSFMSHXGILHQSSCAH 706
>KYP55750.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 436
Score = 90.5 bits (223), Expect = 2e-19
Identities = 40/79 (50%), Positives = 54/79 (68%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
G YF++F+D+FSR TW+YL+K R +LSI F EIQ QF IK F+SDNA EY
Sbjct: 184 GLRYFVTFIDEFSRCTWVYLMKDRYELLSIFVSFFNEIQNQFGKTIKIFKSDNAKEYFSF 243
Query: 59 AMNEFCSSVGMIHHTSCPH 3
++ F SS G++H ++CPH
Sbjct: 244 ELSSFLSSHGVLHQSTCPH 262
>CAN75516.1 hypothetical protein VITISV_021838 [Vitis vinifera]
Length = 996
Score = 90.9 bits (224), Expect = 2e-19
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+DD+SR TW++L+K+R +LSI F+ EIQ QFN +I+ SDNA EY
Sbjct: 502 GFQYFVTFIDDYSRCTWLFLMKNRAELLSIFHKFYAEIQTQFNVSIRVLHSDNAREYCST 561
Query: 59 AMNEFCSSVGMIHHTSCPH 3
F S G++H +SC H
Sbjct: 562 PFTSFMSQHGILHQSSCAH 580
>CAN74101.1 hypothetical protein VITISV_039542 [Vitis vinifera]
Length = 1265
Score = 90.5 bits (223), Expect = 2e-19
Identities = 38/79 (48%), Positives = 53/79 (67%)
Frame = -3
Query: 239 GFSYFISFVDDFSRMTWIYLLKSRESVLSIIKHFHKEIQVQFNCNIKTFQSDNALEYVQK 60
GF YF++F+DD+SR TW++L+K+R + SI F+ EIQ QFN +I+ +SDNA EY
Sbjct: 428 GFQYFVTFIDDYSRCTWLFLMKNRAELFSIFHKFYAEIQTQFNISIRVLRSDNAREYFST 487
Query: 59 AMNEFCSSVGMIHHTSCPH 3
F S G+IH +SC H
Sbjct: 488 PFTSFMSQHGIIHQSSCTH 506