BLASTX nr result
ID: Alisma22_contig00009499
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00009499
(248 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAU31149.1 Retrovirus-related Pol polyprotein from transposon TN... 57 4e-08
JAU71494.1 Retrovirus-related Pol polyprotein from transposon TN... 57 2e-07
AAD15534.1 putative retroelement pol polyprotein [Arabidopsis th... 56 2e-07
JAV00628.1 Retrovirus-related Pol polyprotein from transposon TN... 56 3e-07
XP_018453440.1 PREDICTED: uncharacterized protein LOC108824502 [... 56 3e-07
XP_016464752.1 PREDICTED: uncharacterized protein LOC107787662 [... 56 3e-07
EMT17614.1 DNA-directed RNA polymerase I subunit RPA2 [Aegilops ... 55 6e-07
KYP62388.1 Retrovirus-related Pol polyprotein from transposon TN... 54 2e-06
XP_014513532.1 PREDICTED: uncharacterized protein LOC106771965 [... 53 2e-06
JAU19233.1 putative mitochondrial protein, partial [Noccaea caer... 52 2e-06
XP_008372204.1 PREDICTED: uncharacterized protein LOC103435597 [... 54 2e-06
XP_018435993.1 PREDICTED: uncharacterized protein LOC108808327 [... 53 4e-06
CAN60373.1 hypothetical protein VITISV_034932 [Vitis vinifera] 53 4e-06
GAV80941.1 gag_pre-integrs domain-containing protein [Cephalotus... 50 5e-06
ABI34342.1 Polyprotein, putative [Solanum demissum] 52 5e-06
KOM38790.1 hypothetical protein LR48_Vigan03g217200 [Vigna angul... 52 5e-06
CAN65095.1 hypothetical protein VITISV_011639 [Vitis vinifera] 52 5e-06
JAU98984.1 Retrovirus-related Pol polyprotein from transposon TN... 52 5e-06
CAN76196.1 hypothetical protein VITISV_041073 [Vitis vinifera] 52 5e-06
XP_017441262.1 PREDICTED: uncharacterized protein LOC108346719 [... 52 1e-05
>JAU31149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 154
Score = 56.6 bits (135), Expect = 4e-08
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = -2
Query: 232 STKASALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPRRSS 53
S S+ S+S+ L WH RLGHP S L L P++ LGK +SV+P SS
Sbjct: 15 SCSFSSTSSSIKNLLWHARLGHPHSRALELLLPNVPFKNNECEACILGKHCKSVFP-ISS 73
Query: 52 MSSRHIFDVVHSDVW 8
+ + FD++H+DVW
Sbjct: 74 TTYENCFDLIHTDVW 88
>JAU71494.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 1123
Score = 56.6 bits (135), Expect = 2e-07
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = -2
Query: 232 STKASALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPRRSS 53
S S+ S+S+ L WH RLGHP S L L P++ LGK +SV+P SS
Sbjct: 471 SCSFSSTSSSIKNLLWHARLGHPHSRALELLLPNVSFKNNECEACILGKHCKSVFP-ISS 529
Query: 52 MSSRHIFDVVHSDVW 8
+ + FD++H+DVW
Sbjct: 530 TTYENCFDLIHTDVW 544
>AAD15534.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1664
Score = 56.2 bits (134), Expect = 2e-07
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = -2
Query: 241 MPKSTKASALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPR 62
+P S+ S++ + ++ WH RLGHP S L+ L P LGK +SV+P+
Sbjct: 426 VPLSSHFSSILGNANSESWHARLGHPHSRALKLLLPSTSFKNDECEACILGKHCKSVFPK 485
Query: 61 RSSMSSRHIFDVVHSDVW 8
S++ + FD++HSDVW
Sbjct: 486 SSTIYEK-CFDLIHSDVW 502
>JAV00628.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 529
Score = 55.8 bits (133), Expect = 3e-07
Identities = 29/71 (40%), Positives = 41/71 (57%)
Frame = -2
Query: 220 SALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPRRSSMSSR 41
S++S ++ L WH RLGHP S L L P++ LGK RSV+P SS +
Sbjct: 3 SSVSYTIKNLLWHARLGHPHSRALELLLPNVSFKNNECEACILGKHCRSVFP-ISSTTYE 61
Query: 40 HIFDVVHSDVW 8
+ FD++H+DVW
Sbjct: 62 NCFDLIHTDVW 72
>XP_018453440.1 PREDICTED: uncharacterized protein LOC108824502 [Raphanus sativus]
Length = 656
Score = 55.8 bits (133), Expect = 3e-07
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = -2
Query: 211 SASVSTLQWHYRLGHPSSDKLRHLFPDM------XXXXXXXXXXXLGKQTRSVYPRRSSM 50
S V WH+RLGHPSS KL+HL P + L KQ R +P ++M
Sbjct: 573 SLKVDGSLWHHRLGHPSSAKLQHLSPHIHIDKSTHLESFHCPVCPLAKQKRLPFPSHNNM 632
Query: 49 SSRHIFDVVHSDVWGP 2
SS FD+VH DVWGP
Sbjct: 633 SSAP-FDLVHMDVWGP 647
>XP_016464752.1 PREDICTED: uncharacterized protein LOC107787662 [Nicotiana tabacum]
Length = 766
Score = 55.8 bits (133), Expect = 3e-07
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = -2
Query: 241 MPKSTKASALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL-GKQTRSVYP 65
+ KS A +++ S H RLGHPS KL+ L P + GK TR +P
Sbjct: 229 LSKSQPHVAFTSAASADLLHNRLGHPSLAKLQKLIPSLFTLSSIECESCQLGKHTRISFP 288
Query: 64 RRSSMSSRHIFDVVHSDVWGP 2
+R + + +FD+VHSD+WGP
Sbjct: 289 KRVNNRAISMFDIVHSDIWGP 309
>EMT17614.1 DNA-directed RNA polymerase I subunit RPA2 [Aegilops tauschii]
Length = 1856
Score = 55.1 bits (131), Expect = 6e-07
Identities = 35/83 (42%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = -2
Query: 232 STKASALSASVSTLQWHYRLGHPSSDKLRHLFPD------MXXXXXXXXXXXLGKQTRSV 71
S+ A A S+S S QWH+RLGH +L L LGKQT+
Sbjct: 1268 SSHALAASSSASFQQWHHRLGHICGSRLSSLVRQGILGSVSGDVSLHCNGCRLGKQTQLP 1327
Query: 70 YPRRSSMSSRHIFDVVHSDVWGP 2
YP S+S R FD+VHSDVWGP
Sbjct: 1328 YPTSESVSQRP-FDLVHSDVWGP 1349
>KYP62388.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1362
Score = 53.9 bits (128), Expect = 2e-06
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -2
Query: 244 EMPKSTKASALSASVSTLQWHYRLGHPSSDKLRHLFPDM----XXXXXXXXXXXLGKQTR 77
+ P++ S +S S + WH RLGHP+ + L+HL+PD+ L KQ+R
Sbjct: 424 DSPQTISLSTVSDS-NVFLWHNRLGHPNFNYLKHLYPDLFINKNISSFRCEHCILAKQSR 482
Query: 76 SVYPRRSSMSSRHIFDVVHSDVWGP 2
+ YP S+ F ++HSD+WGP
Sbjct: 483 TNYPSHPYQPSQP-FHLIHSDIWGP 506
>XP_014513532.1 PREDICTED: uncharacterized protein LOC106771965 [Vigna radiata var.
radiata]
Length = 218
Score = 53.1 bits (126), Expect = 2e-06
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 184 HYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL-GKQTRSVYPRRSSMSSRHIFDVVHSDVW 8
H R GHP KL+ L P++ GK RSV+P+RS + F ++HSDVW
Sbjct: 135 HDRFGHPHLSKLKKLCPELSGLQTLECESCQLGKHVRSVFPKRSQLMCTSSFSIIHSDVW 194
Query: 7 GP 2
GP
Sbjct: 195 GP 196
>JAU19233.1 putative mitochondrial protein, partial [Noccaea caerulescens]
Length = 168
Score = 52.4 bits (124), Expect = 2e-06
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = -2
Query: 220 SALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPRRSSMSSR 41
S + AS + WH RLGHP + L + P++ LGK R+V+P+ S++ +
Sbjct: 87 SPVVASANNAIWHARLGHPHARALSLMLPNISFENEQCEACILGKHCRTVFPKSSTVYEK 146
Query: 40 HIFDVVHSDVW 8
FD+VHSDVW
Sbjct: 147 -CFDLVHSDVW 156
>XP_008372204.1 PREDICTED: uncharacterized protein LOC103435597 [Malus domestica]
Length = 1159
Score = 53.5 bits (127), Expect = 2e-06
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = -2
Query: 187 WHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPRRSSMSSRHIFDVVHSDVW 8
WH RL HPS L LFP++ L K TR + SS +S+ +F++VHSDVW
Sbjct: 522 WHQRLAHPSQPXLSSLFPNLGNDLIQCETCHLSKXTRLPFHSSSSXTSK-VFELVHSDVW 580
Query: 7 GP 2
GP
Sbjct: 581 GP 582
>XP_018435993.1 PREDICTED: uncharacterized protein LOC108808327 [Raphanus sativus]
Length = 678
Score = 52.8 bits (125), Expect = 4e-06
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Frame = -2
Query: 244 EMPKSTKASAL--SASVSTLQWHYRLGHPSSDKLRHL-----FPDMXXXXXXXXXXXLGK 86
+ P ST S + S++ S+L WH RLGHPS K+ +L FP L K
Sbjct: 314 DAPNSTPISNIHSSSTTSSLIWHQRLGHPSPQKILYLSKILQFPFKHDHESLCTICPLAK 373
Query: 85 QTRSVYPRRSSMSSRHIFDVVHSDVWGP 2
Q R Y ++M S++ FD++H D WGP
Sbjct: 374 QKRLSYSSLNNM-SKNPFDLIHIDTWGP 400
>CAN60373.1 hypothetical protein VITISV_034932 [Vitis vinifera]
Length = 1264
Score = 52.8 bits (125), Expect = 4e-06
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = -2
Query: 232 STKASALSASVSTLQWHYRLGHPSSDKLRHLFPDM---XXXXXXXXXXXLGKQTRSVYPR 62
S S + + + WHYRLGHP+ L+HLFP + L KQ RS +P
Sbjct: 423 SFSVSCQNNDSAIMLWHYRLGHPNVKYLKHLFPSLFNKNPKSFECEICQLSKQVRSQFPI 482
Query: 61 RSSMSSRHIFDVVHSDVWGP 2
+ S F ++HSD+WGP
Sbjct: 483 QPYKESSP-FSMIHSDIWGP 501
>GAV80941.1 gag_pre-integrs domain-containing protein [Cephalotus follicularis]
Length = 107
Score = 50.1 bits (118), Expect = 5e-06
Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 217 ALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL-GKQTRSVYPRRSSMSSR 41
A S+ +S +Q HY+LGH S L+ L P + GK R Y R + S
Sbjct: 29 ACSSVLSPIQIHYQLGHSSLQSLKTLVPCLSSLSNLECESCQFGKHHRVSYSPRVNKRSV 88
Query: 40 HIFDVVHSDVWGP 2
H F VVHSD+WGP
Sbjct: 89 HPFHVVHSDIWGP 101
>ABI34342.1 Polyprotein, putative [Solanum demissum]
Length = 1054
Score = 52.4 bits (124), Expect = 5e-06
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = -2
Query: 241 MPKSTKASALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL-GKQTRSVYP 65
+ S +A S + S H RLGHPS KL+ + P + GK TR+ +
Sbjct: 231 LTSSNSLTACSITDSPDLIHKRLGHPSLSKLQKMVPSLSSLSTLDCESCQLGKHTRATFS 290
Query: 64 RRSSMSSRHIFDVVHSDVWGP 2
R + S IF +VHSD+WGP
Sbjct: 291 RSTEGRSESIFSLVHSDIWGP 311
>KOM38790.1 hypothetical protein LR48_Vigan03g217200 [Vigna angularis]
Length = 1119
Score = 52.4 bits (124), Expect = 5e-06
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -2
Query: 184 HYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL-GKQTRSVYPRRSSMSSRHIFDVVHSDVW 8
H RLGHP+ KL+ + P + GK RS YP++S + IF +HSD+W
Sbjct: 204 HDRLGHPNLSKLKLMVPSLKHIPVLDCESCQLGKHVRSSYPKKSETRCKSIFSTIHSDIW 263
Query: 7 GP 2
GP
Sbjct: 264 GP 265
>CAN65095.1 hypothetical protein VITISV_011639 [Vitis vinifera]
Length = 1377
Score = 52.4 bits (124), Expect = 5e-06
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = -2
Query: 232 STKASALSASVSTLQWHYRLGHPSSDKLRHLFPDM---XXXXXXXXXXXLGKQTRSVYPR 62
S S + + + WHYRLGHP+ L+HLFP + L KQ RS +P
Sbjct: 482 SFSVSCQNNDSAIMLWHYRLGHPNVKYLKHLFPSLFNKNPKSFECEICQLSKQVRSHFPI 541
Query: 61 RSSMSSRHIFDVVHSDVWGP 2
+ S F ++HSD+WGP
Sbjct: 542 QPYKESSP-FSMIHSDIWGP 560
>JAU98984.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 1379
Score = 52.4 bits (124), Expect = 5e-06
Identities = 27/71 (38%), Positives = 40/71 (56%)
Frame = -2
Query: 220 SALSASVSTLQWHYRLGHPSSDKLRHLFPDMXXXXXXXXXXXLGKQTRSVYPRRSSMSSR 41
S + AS + WH RLGHP + L + P++ LGK R+V+P+ S++ +
Sbjct: 492 SPVVASANNAIWHARLGHPHARALSLMLPNISFENEQCEACILGKHCRTVFPKSSTVYEK 551
Query: 40 HIFDVVHSDVW 8
FD+VHSDVW
Sbjct: 552 -CFDLVHSDVW 561
>CAN76196.1 hypothetical protein VITISV_041073 [Vitis vinifera]
Length = 1505
Score = 52.4 bits (124), Expect = 5e-06
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = -2
Query: 217 ALSASVSTLQWHYRLGHPSSDKLRHLFPDM----XXXXXXXXXXXLGKQTRSVYPRRSSM 50
++++S + WHYRLGHPS L+HLFP + L K R+ +P +
Sbjct: 487 SVASSDDIILWHYRLGHPSFQYLKHLFPSLFRNKNPSSFQCEFCELAKHHRTSFPLQPYR 546
Query: 49 SSRHIFDVVHSDVWGP 2
S+ F ++HSDVWGP
Sbjct: 547 ISKP-FSLIHSDVWGP 561
>XP_017441262.1 PREDICTED: uncharacterized protein LOC108346719 [Vigna angularis]
Length = 432
Score = 51.6 bits (122), Expect = 1e-05
Identities = 26/62 (41%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2
Query: 184 HYRLGHPSSDKLRHLFPDMXXXXXXXXXXXL-GKQTRSVYPRRSSMSSRHIFDVVHSDVW 8
H RLGHPS KL+ + P + GK RS YP+RS F ++HSDVW
Sbjct: 329 HDRLGHPSLFKLKMMVPSLKNIQVLDCESCQLGKHVRSSYPKRSETQCDFPFSIIHSDVW 388
Query: 7 GP 2
GP
Sbjct: 389 GP 390