BLASTX nr result

ID: Alisma22_contig00009383 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00009383
         (238 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_016725139.1 PREDICTED: F-box protein SKIP23-like [Gossypium h...    55   4e-07
XP_012435762.1 PREDICTED: F-box protein SKIP23-like [Gossypium r...    55   7e-07
XP_017255078.1 PREDICTED: F-box protein SKIP23-like [Daucus caro...    55   7e-07
KJB52807.1 hypothetical protein B456_008G278500 [Gossypium raimo...    55   7e-07
XP_017636061.1 PREDICTED: F-box protein SKIP23-like [Gossypium a...    54   1e-06
XP_019165737.1 PREDICTED: uncharacterized protein LOC109161704 [...    52   5e-06

>XP_016725139.1 PREDICTED: F-box protein SKIP23-like [Gossypium hirsutum]
          Length = 451

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = +1

Query: 1   LSSGEFPELKSDSIYFVDDYWEHSLWFNHTKIADFGVYCMKDRSIEPLTPFDSHSFQPAP 180
           +S   FP  +++SIYF DD WE      +    D G+Y +KD S +P+  F S   QP P
Sbjct: 368 VSVQSFPNCETNSIYFTDDCWEKMEEDYNYGGHDMGIYNIKDESFKPIYEFSSDKIQPPP 427

Query: 181 VWVIAPSGVCDS 216
            W+I PS + +S
Sbjct: 428 CWII-PSSMLES 438


>XP_012435762.1 PREDICTED: F-box protein SKIP23-like [Gossypium raimondii]
          Length = 310

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = +1

Query: 1   LSSGEFPELKSDSIYFVDDYWEHSLWFNHTKIADFGVYCMKDRSIEPLTPFDSHSFQPAP 180
           +S   FP  +++SIYF DD WE      +    D G+Y +KD S +P+  F S   QP P
Sbjct: 227 VSVQSFPNCETNSIYFTDDCWEKMEEDYNYGGHDTGIYNIKDESFKPIYEFSSDKIQPPP 286

Query: 181 VWVIAPSGVCDS 216
            W+I PS + +S
Sbjct: 287 CWII-PSAMLES 297


>XP_017255078.1 PREDICTED: F-box protein SKIP23-like [Daucus carota subsp. sativus]
           KZM89634.1 hypothetical protein DCAR_023003 [Daucus
           carota subsp. sativus]
          Length = 397

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 33/70 (47%), Positives = 43/70 (61%), Gaps = 7/70 (10%)
 Frame = +1

Query: 1   LSSGEFPELKSDSIYFVDDYWEHSLWFNHTKI---ADFGVYCMKDRSIE--PLTPFDSHS 165
           LS+ EFPE K + IYF DDY E    +N+  +    D GVY ++D SIE  P  PF+SHS
Sbjct: 327 LSASEFPECKGNRIYFTDDYSE----WNYDGVNGDHDLGVYDLEDGSIEALPCYPFNSHS 382

Query: 166 FQ--PAPVWV 189
            +  P P+WV
Sbjct: 383 TRSWPPPIWV 392


>KJB52807.1 hypothetical protein B456_008G278500 [Gossypium raimondii]
          Length = 435

 Score = 54.7 bits (130), Expect = 7e-07
 Identities = 28/72 (38%), Positives = 40/72 (55%)
 Frame = +1

Query: 1   LSSGEFPELKSDSIYFVDDYWEHSLWFNHTKIADFGVYCMKDRSIEPLTPFDSHSFQPAP 180
           +S   FP  +++SIYF DD WE      +    D G+Y +KD S +P+  F S   QP P
Sbjct: 352 VSVQSFPNCETNSIYFTDDCWEKMEEDYNYGGHDTGIYNIKDESFKPIYEFSSDKIQPPP 411

Query: 181 VWVIAPSGVCDS 216
            W+I PS + +S
Sbjct: 412 CWII-PSAMLES 422


>XP_017636061.1 PREDICTED: F-box protein SKIP23-like [Gossypium arboreum]
          Length = 451

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +1

Query: 1   LSSGEFPELKSDSIYFVDDYWEHSLWFNHTKIADFGVYCMKDRSIEPLTPFDSHSFQPAP 180
           +S   FP  +++SIYF DD W+      +    D G+Y +KD S +P+  F S   QP P
Sbjct: 368 VSVQSFPNCETNSIYFTDDCWQKMEEDYNYGGHDMGIYNIKDESFKPIYEFSSDKIQPPP 427

Query: 181 VWVIAPSGVCDS 216
            W+I PS + +S
Sbjct: 428 CWII-PSSMLES 438


>XP_019165737.1 PREDICTED: uncharacterized protein LOC109161704 [Ipomoea nil]
          Length = 383

 Score = 52.4 bits (124), Expect = 5e-06
 Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +1

Query: 22  ELKSDSIYFVDDYWEHS----LWFNHTKIADFGVYCMKDRSIEPLTPFDSHSFQPAPVWV 189
           E+K+DSIYF DDYWE      L+  H    D GV+ +KD S++     D    +P P W+
Sbjct: 323 EVKADSIYFTDDYWERMDEDYLYGGH----DMGVFSLKDESVKQFLNIDLQKIKPPPFWL 378

Query: 190 IAPS 201
           I  S
Sbjct: 379 IRES 382


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