BLASTX nr result
ID: Alisma22_contig00009192
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00009192
(4232 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2258 0.0
JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthuriu... 2245 0.0
XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 2241 0.0
XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2236 0.0
XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2235 0.0
XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2231 0.0
XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Anan... 2230 0.0
KMZ63282.1 DNA-directed RNA polymerase [Zostera marina] 2223 0.0
XP_004982316.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2216 0.0
XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2215 0.0
XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit... 2215 0.0
XP_003561873.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2213 0.0
EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica... 2212 0.0
XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2212 0.0
XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2204 0.0
XP_010108197.1 DNA-directed RNA polymerase II subunit [Morus not... 2202 0.0
XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2201 0.0
XP_015889960.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2201 0.0
XP_020199539.1 DNA-directed RNA polymerase II subunit RPB2 [Aegi... 2196 0.0
XP_019162258.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2196 0.0
>XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa
acuminata subsp. malaccensis]
Length = 1184
Score = 2258 bits (5850), Expect = 0.0
Identities = 1114/1185 (94%), Positives = 1149/1185 (96%), Gaps = 3/1185 (0%)
Frame = +3
Query: 171 MEDDYSMY-NDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 347
M DDY+M ND+++EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 1 MADDYAMMENDEDDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 60
Query: 348 EIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAP 527
EIRPESQHNPGR SDF+ETIYKISFGQIYLSRPMMTE+DGET TLFPKAARLRNLTYSAP
Sbjct: 61 EIRPESQHNPGRQSDFVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAP 120
Query: 528 LYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 707
LYVDVTKR I+KGHDCEEV ETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 121 LYVDVTKRIIKKGHDCEEVAETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 180
Query: 708 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVR 887
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRPAS+MFVR
Sbjct: 181 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVR 240
Query: 888 MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 1067
MLSRTSAKGGSSGQYIRATLPYIRADIPIII+FRALGFVADKDILEHICYDFSDTQMMEL
Sbjct: 241 MLSRTSAKGGSSGQYIRATLPYIRADIPIIIIFRALGFVADKDILEHICYDFSDTQMMEL 300
Query: 1068 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETK 1247
LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETK
Sbjct: 301 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETK 360
Query: 1248 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQ 1427
KAYYFGYIIHRLLLCA+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQ
Sbjct: 361 KAYYFGYIIHRLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQ 420
Query: 1428 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSH 1607
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSH
Sbjct: 421 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSH 480
Query: 1608 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI 1787
LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PI
Sbjct: 481 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPI 540
Query: 1788 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVG 1967
LEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNPDLLVKTLRQLRRQ+DVNTEVG
Sbjct: 541 LEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVG 600
Query: 1968 VIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFX 2141
VIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI+ALQ ET EEGWHDLV+KGF
Sbjct: 601 VIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEEGWHDLVSKGFI 660
Query: 2142 XXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 2321
NDL+NARQNP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 661 EYIDTEEEETTMISMTINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 720
Query: 2322 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 2501
SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 721 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 780
Query: 2502 IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 2681
IVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM
Sbjct: 781 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 840
Query: 2682 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHS 2861
GMRHGSY+KLDDDGLAPPGTRVSGEDVIIGKTSP+P DD QGQ +SRYTRRDHSTS+RHS
Sbjct: 841 GMRHGSYEKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQ-ASRYTRRDHSTSLRHS 899
Query: 2862 ESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVE 3041
ESGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWTVE
Sbjct: 900 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 959
Query: 3042 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 3221
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 960 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1019
Query: 3222 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 3401
QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1020 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1079
Query: 3402 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGC 3581
DGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFECRGC
Sbjct: 1080 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGC 1139
Query: 3582 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
KNKTDIVQVHIPYACKLLFQELMAMAIAPRM+TK+ KDQK+K
Sbjct: 1140 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKEPNPTKDQKKK 1184
>JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthurium amnicola]
JAT42934.1 DNA-directed RNA polymerase II subunit RPB2
[Anthurium amnicola] JAT51792.1 DNA-directed RNA
polymerase II subunit RPB2 [Anthurium amnicola]
JAT61623.1 DNA-directed RNA polymerase II subunit RPB2
[Anthurium amnicola]
Length = 1173
Score = 2245 bits (5818), Expect = 0.0
Identities = 1109/1173 (94%), Positives = 1138/1173 (97%), Gaps = 2/1173 (0%)
Frame = +3
Query: 171 MEDDYSMYNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 350
M DDY D++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE
Sbjct: 1 MPDDYMEDVDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 60
Query: 351 IRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPL 530
IRPESQHNPGR SDFLETIYKISFGQIYLSRPMMTE+DGET TLFPKAARLRNLTYSAPL
Sbjct: 61 IRPESQHNPGRQSDFLETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPL 120
Query: 531 YVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 710
YVDVTKR I+KGHDCEEV ETQ+FAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD
Sbjct: 121 YVDVTKRIIKKGHDCEEVAETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 180
Query: 711 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRM 890
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPAS+MFVRM
Sbjct: 181 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASSMFVRM 240
Query: 891 LSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 1070
LSRTSAKGGSSGQYIRATLPYIRAD+PIIIVFRALGFVADKDILEHICYDFSDTQMMELL
Sbjct: 241 LSRTSAKGGSSGQYIRATLPYIRADVPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 300
Query: 1071 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKK 1250
RPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKK
Sbjct: 301 RPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKK 360
Query: 1251 AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQK 1430
AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQK
Sbjct: 361 AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQK 420
Query: 1431 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHL 1610
CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSHL
Sbjct: 421 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHL 480
Query: 1611 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 1790
RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL
Sbjct: 481 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 540
Query: 1791 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGV 1970
EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVG+
Sbjct: 541 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGI 600
Query: 1971 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFXX 2144
IRDIRLKELRLYTDYGRCSRPLFIVEKQ LLIKK+ I+ALQ E+QEEGWHDLV KGF
Sbjct: 601 IRDIRLKELRLYTDYGRCSRPLFIVEKQTLLIKKRHIRALQQRESQEEGWHDLVTKGFIE 660
Query: 2145 XXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQS 2324
NDLINARQNP+EAY+ETYTHCEIHPSLILGVCASIIPFPDHNQS
Sbjct: 661 YIDTEEEETTMISMTINDLINARQNPEEAYAETYTHCEIHPSLILGVCASIIPFPDHNQS 720
Query: 2325 PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI 2504
PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI
Sbjct: 721 PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI 780
Query: 2505 VAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMG 2684
VAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR+NTMG
Sbjct: 781 VAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRDNTMG 840
Query: 2685 MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSE 2864
MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSP+P D++QGQ +SRYTRRDHSTS+RHSE
Sbjct: 841 MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDESQGQ-ASRYTRRDHSTSLRHSE 899
Query: 2865 SGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEG 3044
SGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWTVEG
Sbjct: 900 SGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG 959
Query: 3045 ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ 3224
ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ
Sbjct: 960 ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ 1019
Query: 3225 MRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD 3404
MRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD
Sbjct: 1020 MRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD 1079
Query: 3405 GGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCK 3584
GGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCEKCG+IA+ANLKKN+FECRGCK
Sbjct: 1080 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNTFECRGCK 1139
Query: 3585 NKTDIVQVHIPYACKLLFQELMAMAIAPRMMTK 3683
NKTDIVQVHIPYACKLLFQELMAMAIAPRM+TK
Sbjct: 1140 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTK 1172
>XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB2 [Elaeis guineensis]
Length = 1187
Score = 2241 bits (5807), Expect = 0.0
Identities = 1106/1185 (93%), Positives = 1146/1185 (96%), Gaps = 5/1185 (0%)
Frame = +3
Query: 177 DDYSMY---NDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 347
+DY+M N+++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+I
Sbjct: 2 EDYAMMENENEEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANI 61
Query: 348 EIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAP 527
EIRPESQHNPGR SDF+ETIYKISFGQIYLSRPMMTE+DGET TLFPKAARLRNLTYSAP
Sbjct: 62 EIRPESQHNPGRQSDFVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAP 121
Query: 528 LYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 707
LYVDVTK+ I+KGHDCEEVTETQ+F KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 122 LYVDVTKKVIKKGHDCEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 181
Query: 708 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVR 887
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSM ESQ+RPASTMFVR
Sbjct: 182 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVR 241
Query: 888 MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 1067
MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL
Sbjct: 242 MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 301
Query: 1068 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETK 1247
LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETK
Sbjct: 302 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETK 361
Query: 1248 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQ 1427
KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQ
Sbjct: 362 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQ 421
Query: 1428 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSH 1607
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSH
Sbjct: 422 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSH 481
Query: 1608 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI 1787
LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PI
Sbjct: 482 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPI 541
Query: 1788 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVG 1967
LEFLEEW TENFEEISPAVIPQA+KIFVNG WVGIHRNPDLLV+TLR+LRRQ+DVNTEVG
Sbjct: 542 LEFLEEWGTENFEEISPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVG 601
Query: 1968 VIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFX 2141
V+RDIRLKELRLYTDYGRCSRPLFIVE QRLLIKKKDIQALQ E+ EEGWHDLVAKGF
Sbjct: 602 VVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKKDIQALQQRESPEEGWHDLVAKGFI 661
Query: 2142 XXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 2321
NDL+NARQNP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 662 EYIDTEEEETTMIAMTINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 721
Query: 2322 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 2501
SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 722 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 781
Query: 2502 IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 2681
IVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM
Sbjct: 782 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 841
Query: 2682 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHS 2861
GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSP+P DD+QGQ +SRYTRRDHSTS+RHS
Sbjct: 842 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDSQGQ-ASRYTRRDHSTSVRHS 900
Query: 2862 ESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVE 3041
ESGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWTVE
Sbjct: 901 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 960
Query: 3042 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 3221
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 961 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1020
Query: 3222 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 3401
QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1021 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1080
Query: 3402 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGC 3581
DGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CG+IA+ANLKKNSFECRGC
Sbjct: 1081 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGC 1140
Query: 3582 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
KNKTDIVQVHIPYACKLLFQELMAMAIAPRM TK++K KDQK+K
Sbjct: 1141 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMFTKEMKPAKDQKKK 1185
>XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
nucifera]
Length = 1189
Score = 2236 bits (5794), Expect = 0.0
Identities = 1106/1184 (93%), Positives = 1144/1184 (96%), Gaps = 3/1184 (0%)
Frame = +3
Query: 174 EDDYSMYNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 353
E D SM ND++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI
Sbjct: 6 EYDPSM-NDEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 64
Query: 354 RPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPLY 533
RPESQHNPGR SDFLETIYKISFGQIYLS+PMMTE+DGET TLFPKAARLRNLTYSAPLY
Sbjct: 65 RPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 124
Query: 534 VDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 713
VDVTKR I+KGHDCEEVTETQ+FAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ
Sbjct: 125 VDVTKRVIKKGHDCEEVTETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 184
Query: 714 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRML 893
GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAESQNRP S+MFVRML
Sbjct: 185 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRML 244
Query: 894 SRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLR 1073
SRTSAKGGSSGQYIRATLPYIR +IPIIIVFRALGFVADKDILEHICYDFSDTQMMELLR
Sbjct: 245 SRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLR 304
Query: 1074 PSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKA 1253
PSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKA
Sbjct: 305 PSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKA 364
Query: 1254 YYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKC 1433
YYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV++YVQKC
Sbjct: 365 YYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKC 424
Query: 1434 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLR 1613
VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLR
Sbjct: 425 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLR 484
Query: 1614 RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILE 1793
RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILE
Sbjct: 485 RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILE 544
Query: 1794 FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVI 1973
FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNP+LLVKTLRQLRRQVDVNTEVGVI
Sbjct: 545 FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVI 604
Query: 1974 RDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQE---TQEEGWHDLVAKGFXX 2144
RDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDI+ALQ+ ++E GWHDLVAKGF
Sbjct: 605 RDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIRALQQRESSEEGGWHDLVAKGFIE 664
Query: 2145 XXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQS 2324
NDL+ AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQS
Sbjct: 665 YVDTEEEETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQS 724
Query: 2325 PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI 2504
PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI
Sbjct: 725 PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI 784
Query: 2505 VAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMG 2684
VAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+RENTMG
Sbjct: 785 VAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMG 844
Query: 2685 MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSE 2864
MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P+ DD+QGQ SSRYTRRDHSTS+RHSE
Sbjct: 845 MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQ-SSRYTRRDHSTSLRHSE 903
Query: 2865 SGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEG 3044
SGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWTVEG
Sbjct: 904 SGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG 963
Query: 3045 ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ 3224
ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ
Sbjct: 964 ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ 1023
Query: 3225 MRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD 3404
MRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD
Sbjct: 1024 MRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD 1083
Query: 3405 GGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCK 3584
GGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CG+IA+ANLKKNSFECRGCK
Sbjct: 1084 GGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCK 1143
Query: 3585 NKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
NKTDIVQVHIPYACKLLFQELM+MAIAPRM+TK++K KDQK+K
Sbjct: 1144 NKTDIVQVHIPYACKLLFQELMSMAIAPRMLTKEVKPSKDQKKK 1187
>XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Phoenix
dactylifera]
Length = 1187
Score = 2235 bits (5791), Expect = 0.0
Identities = 1101/1185 (92%), Positives = 1144/1185 (96%), Gaps = 5/1185 (0%)
Frame = +3
Query: 177 DDYSMY---NDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 347
+DY+M N+D+EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+I
Sbjct: 2 EDYAMMENENEDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANI 61
Query: 348 EIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAP 527
EIRPESQHNPGR SDF+ETIYKISFGQIYLSRPMMTE+DGET TLFPKAARLRNLTYSAP
Sbjct: 62 EIRPESQHNPGRQSDFVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAP 121
Query: 528 LYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 707
LYVDVTK+ I+KGHDCEEVTETQ+F KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY
Sbjct: 122 LYVDVTKKVIKKGHDCEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 181
Query: 708 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVR 887
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSM ESQ+RPASTMFVR
Sbjct: 182 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVR 241
Query: 888 MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 1067
MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL
Sbjct: 242 MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 301
Query: 1068 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETK 1247
LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETK
Sbjct: 302 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETK 361
Query: 1248 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQ 1427
KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQ
Sbjct: 362 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQ 421
Query: 1428 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSH 1607
KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAG RAGVSQVLNRLT+ASTLSH
Sbjct: 422 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGARAGVSQVLNRLTYASTLSH 481
Query: 1608 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI 1787
LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PI
Sbjct: 482 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPI 541
Query: 1788 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVG 1967
LEFLEEW TENFEEISPAVIPQA+KIFVNG WVGIHRNPDLLV+TLR+LRRQ+DVNTEVG
Sbjct: 542 LEFLEEWGTENFEEISPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVG 601
Query: 1968 VIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFX 2141
V+RDIRLKELRLYTDYGRCSRPLFIVE QRLLIKK+ IQALQ E+ EEGWHDLVAKGF
Sbjct: 602 VVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKRHIQALQQRESPEEGWHDLVAKGFI 661
Query: 2142 XXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 2321
NDL+NARQNP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 662 EYIDTEEEETTMIAMTINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 721
Query: 2322 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 2501
SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 722 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 781
Query: 2502 IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 2681
IVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM
Sbjct: 782 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 841
Query: 2682 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHS 2861
GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSP+P DD+QGQ +SRYTRRDHSTS+RHS
Sbjct: 842 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDSQGQ-ASRYTRRDHSTSVRHS 900
Query: 2862 ESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVE 3041
ESGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWTVE
Sbjct: 901 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 960
Query: 3042 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 3221
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 961 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1020
Query: 3222 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 3401
QMRGFETMYNGHTGRKLTAMIF+GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1021 QMRGFETMYNGHTGRKLTAMIFIGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1080
Query: 3402 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGC 3581
DGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CG+IA+ANLKKNSFECRGC
Sbjct: 1081 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGC 1140
Query: 3582 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
KNKTDIVQVHIPYACKLLFQELMAMAIAPRM +K++K KDQK++
Sbjct: 1141 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMFSKEVKAAKDQKKR 1185
>XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] CAN72948.1 hypothetical protein VITISV_033708
[Vitis vinifera] CBI21848.3 unnamed protein product,
partial [Vitis vinifera]
Length = 1193
Score = 2231 bits (5782), Expect = 0.0
Identities = 1101/1188 (92%), Positives = 1143/1188 (96%), Gaps = 3/1188 (0%)
Frame = +3
Query: 162 PVTMEDDYSMYNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 341
P +E++ DD+EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA
Sbjct: 9 PTVVEEE----EDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA 64
Query: 342 DIEIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYS 521
DIEIRPESQHNPGR SDFLETIYKISFGQIYLS+PMMTE+DGET TLFPKAARLRNLTYS
Sbjct: 65 DIEIRPESQHNPGRQSDFLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYS 124
Query: 522 APLYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGEC 701
APLYVDVTKR I+KGHD EEVTETQ+F KVFIGKVPIMLRSSYCT+YQNSEKDLTELGEC
Sbjct: 125 APLYVDVTKRIIKKGHDLEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGEC 184
Query: 702 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMF 881
PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAESQNRP S+MF
Sbjct: 185 PYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMF 244
Query: 882 VRMLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMM 1061
VRMLSRTSAKGGSSGQYIRATLPYIR +IPIIIVFRALGFVADKDILEHICYDFSDTQMM
Sbjct: 245 VRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMM 304
Query: 1062 ELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCE 1241
ELLRPSLEEAFVIQNQQVALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCE
Sbjct: 305 ELLRPSLEEAFVIQNQQVALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCE 364
Query: 1242 TKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSY 1421
TKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV++Y
Sbjct: 365 TKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAY 424
Query: 1422 VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTL 1601
VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTL
Sbjct: 425 VQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTL 484
Query: 1602 SHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAN 1781
SHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAN
Sbjct: 485 SHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAN 544
Query: 1782 PILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTE 1961
PILEFLEEWSTENFEEISPAVIPQ+TKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTE
Sbjct: 545 PILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTE 604
Query: 1962 VGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ---ETQEEGWHDLVAK 2132
VGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKK+DI+ALQ ++ GWHDLV+K
Sbjct: 605 VGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSK 664
Query: 2133 GFXXXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPD 2312
GF NDLI+AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPD
Sbjct: 665 GFIEYVDTEEEETTMISMTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPD 724
Query: 2313 HNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 2492
HNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 725 HNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 784
Query: 2493 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE 2672
INAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE
Sbjct: 785 INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE 844
Query: 2673 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSM 2852
NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P+ DD+QGQ +SRYTRRDHSTS+
Sbjct: 845 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDSQGQ-ASRYTRRDHSTSL 903
Query: 2853 RHSESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPW 3032
RHSESGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPW
Sbjct: 904 RHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 963
Query: 3033 TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 3212
TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK
Sbjct: 964 TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 1023
Query: 3213 CGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 3392
CGYQMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG
Sbjct: 1024 CGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 1083
Query: 3393 RSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFEC 3572
RSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CG+IA+ANLKKNSFEC
Sbjct: 1084 RSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFEC 1143
Query: 3573 RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM+TK++K PKDQK+K
Sbjct: 1144 RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKEVKPPKDQKKK 1191
>XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus]
OAY64594.1 DNA-directed RNA polymerase II subunit RPB2
[Ananas comosus]
Length = 1187
Score = 2230 bits (5778), Expect = 0.0
Identities = 1096/1175 (93%), Positives = 1136/1175 (96%), Gaps = 2/1175 (0%)
Frame = +3
Query: 198 DDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNP 377
D+EEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNP
Sbjct: 14 DEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNP 73
Query: 378 GRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPLYVDVTKRTI 557
GR S+F ET++KISFGQIYLSRPMMTE+DGET TLFPKAARLRNLTYSAPLYVDVT R +
Sbjct: 74 GRQSEFSETLHKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTYRVV 133
Query: 558 RKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIING 737
+KGHDCEEVTETQ++ KVFIGKVPIMLRSSYCTLYQ SEKDLTELGECPYDQGGYFIING
Sbjct: 134 KKGHDCEEVTETQEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIING 193
Query: 738 SEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRMLSRTSAKGG 917
SEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRPAS+MFVRMLSRTSAKGG
Sbjct: 194 SEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGG 253
Query: 918 SSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFV 1097
SSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFV
Sbjct: 254 SSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFV 313
Query: 1098 IQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIH 1277
IQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIH
Sbjct: 314 IQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIH 373
Query: 1278 RLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVN 1457
RLLLCA+GRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQKCVDNGK+VN
Sbjct: 374 RLLLCAIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVN 433
Query: 1458 LQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGR 1637
LQFAIKAKT+TSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGR
Sbjct: 434 LQFAIKAKTVTSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGR 493
Query: 1638 EGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTE 1817
EGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TE
Sbjct: 494 EGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTE 553
Query: 1818 NFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKEL 1997
NFEEISPAVIPQA KIFVNGCWVGIHRNPDLLV+TLR+LRRQ+DVNTEVGV+RDIRLKEL
Sbjct: 554 NFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKEL 613
Query: 1998 RLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFXXXXXXXXXXX 2171
RLYTDYGRCSRPLFIVE QRLLIKKKDI+ALQ E+ EEGWHDLVAKGF
Sbjct: 614 RLYTDYGRCSRPLFIVENQRLLIKKKDIRALQQRESPEEGWHDLVAKGFIEYIDTEEEET 673
Query: 2172 XXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM 2351
NDL+NARQNP EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM
Sbjct: 674 TMISMTINDLVNARQNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM 733
Query: 2352 GKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGY 2531
GKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGY
Sbjct: 734 GKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGY 793
Query: 2532 NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKL 2711
NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKL
Sbjct: 794 NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKL 853
Query: 2712 DDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSESGMVDQVLL 2891
DDDGLAPPGTRVSGEDVIIGKTSP+ DD+QGQ +SRYTRRDHST +RHSESGMVDQVLL
Sbjct: 854 DDDGLAPPGTRVSGEDVIIGKTSPISQDDSQGQ-ASRYTRRDHSTCLRHSESGMVDQVLL 912
Query: 2892 TTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGITPDIIVNP 3071
TTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWT+EGITPDIIVNP
Sbjct: 913 TTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNP 972
Query: 3072 HAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYN 3251
HAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYN
Sbjct: 973 HAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYN 1032
Query: 3252 GHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEME 3431
GHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEME
Sbjct: 1033 GHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEME 1092
Query: 3432 RDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCKNKTDIVQVH 3611
RDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFECRGCKNKTDIVQVH
Sbjct: 1093 RDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVH 1152
Query: 3612 IPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
IPYACKLLFQELMAMAIAPRM+TK+ K KDQK+K
Sbjct: 1153 IPYACKLLFQELMAMAIAPRMLTKEEKPSKDQKKK 1187
>KMZ63282.1 DNA-directed RNA polymerase [Zostera marina]
Length = 1186
Score = 2223 bits (5760), Expect = 0.0
Identities = 1095/1180 (92%), Positives = 1139/1180 (96%), Gaps = 2/1180 (0%)
Frame = +3
Query: 183 YSMYNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPE 362
Y+ Y +++EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA +EIRPE
Sbjct: 8 YAPYANEDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAHMEIRPE 67
Query: 363 SQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPLYVDV 542
SQHNPGR SD +ETIYKISFGQIYLSRPMMTE+DGET TLFPKAARLRNLTYSAPLYVDV
Sbjct: 68 SQHNPGRQSDCVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDV 127
Query: 543 TKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGY 722
++R I+KGHDCEEV E+QDFAKVFIGKVPIMLRSSYCTLYQ+SEKDLTELGECPYDQGGY
Sbjct: 128 SRRIIKKGHDCEEVAESQDFAKVFIGKVPIMLRSSYCTLYQSSEKDLTELGECPYDQGGY 187
Query: 723 FIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRMLSRT 902
F+INGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYV EVRSMAESQNRPAS+MFVRML+RT
Sbjct: 188 FVINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPASSMFVRMLART 247
Query: 903 SAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSL 1082
SAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSL
Sbjct: 248 SAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSL 307
Query: 1083 EEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKAYYF 1262
EEAFVIQNQQVALDYIGKRG+TVGVT++KRIKYA+EILQKEMLPHVGVGEYCETKKAYYF
Sbjct: 308 EEAFVIQNQQVALDYIGKRGSTVGVTRDKRIKYAKEILQKEMLPHVGVGEYCETKKAYYF 367
Query: 1263 GYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDN 1442
GYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDN
Sbjct: 368 GYIIHRLLLCALGRRQEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDN 427
Query: 1443 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLN 1622
GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLN
Sbjct: 428 GKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLN 487
Query: 1623 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 1802
SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE
Sbjct: 488 SPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLE 547
Query: 1803 EWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDI 1982
EWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDI
Sbjct: 548 EWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDI 607
Query: 1983 RLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFXXXXXX 2156
RLKELRLYTDYGRCSRPLFIVE+QRLLIKK+DI+ALQ ETQEEGWHDLV KGF
Sbjct: 608 RLKELRLYTDYGRCSRPLFIVERQRLLIKKRDIRALQQRETQEEGWHDLVTKGFIEYIDT 667
Query: 2157 XXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 2336
NDLINARQNP +AYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT
Sbjct: 668 EEEETTMISMTINDLINARQNPNDAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNT 727
Query: 2337 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIS 2516
YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIS
Sbjct: 728 YQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIS 787
Query: 2517 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHG 2696
CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTL+KEDFG PNRENTMGMRHG
Sbjct: 788 CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLIKEDFGCPNRENTMGMRHG 847
Query: 2697 SYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSESGMV 2876
SYDKLD DGLAPPGTRVSGEDVIIGKT+P+ D+TQGQ ++RYTRRDHSTS+RHSESGMV
Sbjct: 848 SYDKLDIDGLAPPGTRVSGEDVIIGKTTPIVQDETQGQ-ATRYTRRDHSTSLRHSESGMV 906
Query: 2877 DQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGITPD 3056
DQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGTIG+TYTQEDMPWTVEGITPD
Sbjct: 907 DQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTIGITYTQEDMPWTVEGITPD 966
Query: 3057 IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF 3236
IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF
Sbjct: 967 IIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGF 1026
Query: 3237 ETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR 3416
E MYNGHTGRKLTA+IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR
Sbjct: 1027 EAMYNGHTGRKLTALIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLR 1086
Query: 3417 FGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCKNKTD 3596
FGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCE+CG+IA+ANLKK+S+ECRGCKNKTD
Sbjct: 1087 FGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEQCGLIAIANLKKSSYECRGCKNKTD 1146
Query: 3597 IVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
IVQVHIPYACKLLFQELM+MAIAPRMMTK++K KDQ ++
Sbjct: 1147 IVQVHIPYACKLLFQELMSMAIAPRMMTKELKKSKDQSKR 1186
>XP_004982316.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Setaria
italica] KQK87931.1 hypothetical protein SETIT_033950mg
[Setaria italica]
Length = 1226
Score = 2216 bits (5741), Expect = 0.0
Identities = 1089/1184 (91%), Positives = 1134/1184 (95%), Gaps = 2/1184 (0%)
Frame = +3
Query: 171 MEDDYSMYNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 350
ME+D DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE
Sbjct: 44 MEEDGDAEQRDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 103
Query: 351 IRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPL 530
IRPESQHNPGR ++F ET++KISFGQIYLS+PMMTEADGET TLFPK+ARLRNLTYSAPL
Sbjct: 104 IRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPL 163
Query: 531 YVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 710
YVDV+ R ++KGHDCEEVTET D+ KVFIGKVPIMLRSSYCTLYQ SEKDLTELGECPYD
Sbjct: 164 YVDVSYRVMKKGHDCEEVTETSDYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYD 223
Query: 711 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRM 890
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKF+YVAEVRSMAE+QNRPAS+MFVRM
Sbjct: 224 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFSYVAEVRSMAENQNRPASSMFVRM 283
Query: 891 LSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 1070
LSR AKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL
Sbjct: 284 LSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 343
Query: 1071 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKK 1250
RPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKK
Sbjct: 344 RPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKK 403
Query: 1251 AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQK 1430
AYYFGYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQK
Sbjct: 404 AYYFGYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 463
Query: 1431 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHL 1610
CVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSHL
Sbjct: 464 CVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHL 523
Query: 1611 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 1790
RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL
Sbjct: 524 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 583
Query: 1791 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGV 1970
EFLEEW TENFEEISPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQ+DVNTEVGV
Sbjct: 584 EFLEEWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGV 643
Query: 1971 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFXX 2144
+RDIRLKELRLYTDYGRCSRPLFIVE QRLLIKK I+ALQ ET +EGWH+LV+KG+
Sbjct: 644 VRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKAHIRALQQRETPDEGWHELVSKGYIE 703
Query: 2145 XXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQS 2324
NDLINAR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQS
Sbjct: 704 YIDTEEEETTMISMTINDLINARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQS 763
Query: 2325 PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI 2504
PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI
Sbjct: 764 PRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAI 823
Query: 2505 VAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMG 2684
VAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMG
Sbjct: 824 VAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMG 883
Query: 2685 MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSE 2864
MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSP+P DD QGQ +SRY++RDHSTS+RHSE
Sbjct: 884 MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQ-ASRYSKRDHSTSLRHSE 942
Query: 2865 SGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEG 3044
SGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWT+EG
Sbjct: 943 SGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEG 1002
Query: 3045 ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ 3224
ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ
Sbjct: 1003 ITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQ 1062
Query: 3225 MRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD 3404
MRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD
Sbjct: 1063 MRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRD 1122
Query: 3405 GGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCK 3584
GGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFECRGCK
Sbjct: 1123 GGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCK 1182
Query: 3585 NKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
NKTDIVQVHIPYACKLLFQELMAMAIAPRM+T D+K KDQK++
Sbjct: 1183 NKTDIVQVHIPYACKLLFQELMAMAIAPRMLTHDMKTGKDQKKR 1226
>XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Oryza brachyantha] XP_015690689.1 PREDICTED:
DNA-directed RNA polymerase II subunit RPB2 isoform X3
[Oryza brachyantha]
Length = 1219
Score = 2215 bits (5739), Expect = 0.0
Identities = 1091/1185 (92%), Positives = 1136/1185 (95%), Gaps = 3/1185 (0%)
Frame = +3
Query: 171 MEDDYSMYND-DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 347
MEDD + + DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 36 MEDDEAEGDGPDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 95
Query: 348 EIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAP 527
EIRPESQHNPGR ++F ET++KISFGQIYLS+PMMTEADGET TLFPK+ARLRNLTYSAP
Sbjct: 96 EIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAP 155
Query: 528 LYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 707
LYVDV+ R ++KGHDCEEVTET ++ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPY
Sbjct: 156 LYVDVSYRVMKKGHDCEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPY 215
Query: 708 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVR 887
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRPAS+MFVR
Sbjct: 216 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVR 275
Query: 888 MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 1067
MLSR AKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL
Sbjct: 276 MLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 335
Query: 1068 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETK 1247
LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETK
Sbjct: 336 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETK 395
Query: 1248 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQ 1427
KAYYFGYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQ
Sbjct: 396 KAYYFGYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQ 455
Query: 1428 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSH 1607
KCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSH
Sbjct: 456 KCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSH 515
Query: 1608 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI 1787
LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI
Sbjct: 516 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI 575
Query: 1788 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVG 1967
LEFLEEW TENFEEISPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQ+DVNTEVG
Sbjct: 576 LEFLEEWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVG 635
Query: 1968 VIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFX 2141
V+RDIRLKELRLYTDYGRCSRPLFIVE QRLLIKKK I+ALQ ET EEGWHDLVAKGF
Sbjct: 636 VVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFI 695
Query: 2142 XXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 2321
NDL+NAR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 696 EYIDTEEEETTMISMTINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 755
Query: 2322 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 2501
SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 756 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 815
Query: 2502 IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 2681
IVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTM
Sbjct: 816 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 875
Query: 2682 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHS 2861
GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSP+P DD QGQ ++RYT+RDHSTS+RHS
Sbjct: 876 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQ-ATRYTKRDHSTSLRHS 934
Query: 2862 ESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVE 3041
ESGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWT+E
Sbjct: 935 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIE 994
Query: 3042 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 3221
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 995 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1054
Query: 3222 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 3401
QMRGFETMYNGHTGRKL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1055 QMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1114
Query: 3402 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGC 3581
DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFECRGC
Sbjct: 1115 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGC 1174
Query: 3582 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
KNKTDIVQVHIPYACKLLFQELMAMAIAPRM+T D K KDQKR+
Sbjct: 1175 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTNDNKTGKDQKRR 1219
>XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Oryza brachyantha]
Length = 1254
Score = 2215 bits (5739), Expect = 0.0
Identities = 1091/1185 (92%), Positives = 1136/1185 (95%), Gaps = 3/1185 (0%)
Frame = +3
Query: 171 MEDDYSMYND-DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 347
MEDD + + DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI
Sbjct: 71 MEDDEAEGDGPDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADI 130
Query: 348 EIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAP 527
EIRPESQHNPGR ++F ET++KISFGQIYLS+PMMTEADGET TLFPK+ARLRNLTYSAP
Sbjct: 131 EIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAP 190
Query: 528 LYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPY 707
LYVDV+ R ++KGHDCEEVTET ++ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPY
Sbjct: 191 LYVDVSYRVMKKGHDCEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPY 250
Query: 708 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVR 887
DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRPAS+MFVR
Sbjct: 251 DQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVR 310
Query: 888 MLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 1067
MLSR AKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL
Sbjct: 311 MLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMEL 370
Query: 1068 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETK 1247
LRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETK
Sbjct: 371 LRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETK 430
Query: 1248 KAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQ 1427
KAYYFGYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQ
Sbjct: 431 KAYYFGYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQ 490
Query: 1428 KCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSH 1607
KCVDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSH
Sbjct: 491 KCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSH 550
Query: 1608 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI 1787
LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI
Sbjct: 551 LRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPI 610
Query: 1788 LEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVG 1967
LEFLEEW TENFEEISPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQ+DVNTEVG
Sbjct: 611 LEFLEEWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVG 670
Query: 1968 VIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFX 2141
V+RDIRLKELRLYTDYGRCSRPLFIVE QRLLIKKK I+ALQ ET EEGWHDLVAKGF
Sbjct: 671 VVRDIRLKELRLYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFI 730
Query: 2142 XXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 2321
NDL+NAR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 731 EYIDTEEEETTMISMTINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 790
Query: 2322 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 2501
SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 791 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 850
Query: 2502 IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 2681
IVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTM
Sbjct: 851 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTM 910
Query: 2682 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHS 2861
GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSP+P DD QGQ ++RYT+RDHSTS+RHS
Sbjct: 911 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQ-ATRYTKRDHSTSLRHS 969
Query: 2862 ESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVE 3041
ESGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWT+E
Sbjct: 970 ESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIE 1029
Query: 3042 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 3221
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 1030 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1089
Query: 3222 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 3401
QMRGFETMYNGHTGRKL+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1090 QMRGFETMYNGHTGRKLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1149
Query: 3402 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGC 3581
DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFECRGC
Sbjct: 1150 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGC 1209
Query: 3582 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
KNKTDIVQVHIPYACKLLFQELMAMAIAPRM+T D K KDQKR+
Sbjct: 1210 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTNDNKTGKDQKRR 1254
>XP_003561873.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Brachypodium
distachyon] KQK13978.1 hypothetical protein BRADI_1g13720
[Brachypodium distachyon]
Length = 1228
Score = 2213 bits (5735), Expect = 0.0
Identities = 1089/1188 (91%), Positives = 1138/1188 (95%), Gaps = 4/1188 (0%)
Frame = +3
Query: 165 VTMEDDYSMYND--DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 338
V MED+ + + DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 42 VDMEDEDAEGEEARDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 101
Query: 339 ADIEIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTY 518
ADIEIRPESQHNPGR ++F ET++KISFGQIYLS+PMMTEADGET TLFPK+ARLRNLTY
Sbjct: 102 ADIEIRPESQHNPGRQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTY 161
Query: 519 SAPLYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 698
SAPLYVDV+ R ++KGHDCEEVTET ++ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGE
Sbjct: 162 SAPLYVDVSYRVVKKGHDCEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGE 221
Query: 699 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTM 878
CPYDQGGYF+INGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAE+QNRPAS+M
Sbjct: 222 CPYDQGGYFVINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSM 281
Query: 879 FVRMLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQM 1058
FVRMLSR AKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQM
Sbjct: 282 FVRMLSRAGAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQM 341
Query: 1059 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYC 1238
MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGE+C
Sbjct: 342 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFC 401
Query: 1239 ETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKS 1418
ETKKAYYFGYIIHRLL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+S
Sbjct: 402 ETKKAYYFGYIIHRLLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRS 461
Query: 1419 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFAST 1598
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+AST
Sbjct: 462 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYAST 521
Query: 1599 LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 1778
LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 522 LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 581
Query: 1779 NPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNT 1958
NPILEFLEEW TENFEEISPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQ+DVNT
Sbjct: 582 NPILEFLEEWGTENFEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNT 641
Query: 1959 EVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAK 2132
EVGV+RDIRLKELRLYTDYGRCSRPLFIV+ QRLLIKKK I+ALQ ET +EGWHDLVAK
Sbjct: 642 EVGVVRDIRLKELRLYTDYGRCSRPLFIVDGQRLLIKKKHIRALQQRETPDEGWHDLVAK 701
Query: 2133 GFXXXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPD 2312
GF NDL++AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPD
Sbjct: 702 GFIEYIDTEEEETTMISMTINDLVSARNNPQEAYSETYTHCEIHPSLILGVCASIIPFPD 761
Query: 2313 HNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 2492
HNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG
Sbjct: 762 HNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAG 821
Query: 2493 INAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE 2672
INAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRE
Sbjct: 822 INAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRE 881
Query: 2673 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSM 2852
NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSP+P DD QGQ ++RY++RDHSTS+
Sbjct: 882 NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQ-ATRYSKRDHSTSL 940
Query: 2853 RHSESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPW 3032
RHSESGMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPW
Sbjct: 941 RHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPW 1000
Query: 3033 TVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 3212
T+EGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK
Sbjct: 1001 TIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHK 1060
Query: 3213 CGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 3392
CGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG
Sbjct: 1061 CGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEG 1120
Query: 3393 RSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFEC 3572
RSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFEC
Sbjct: 1121 RSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFEC 1180
Query: 3573 RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM+T DIK KDQK++
Sbjct: 1181 RGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTHDIKSGKDQKKR 1228
>EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
Length = 1218
Score = 2212 bits (5732), Expect = 0.0
Identities = 1087/1174 (92%), Positives = 1130/1174 (96%), Gaps = 2/1174 (0%)
Frame = +3
Query: 201 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG 380
DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG
Sbjct: 46 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG 105
Query: 381 RPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPLYVDVTKRTIR 560
R ++F ET++KISFGQIYLS+PMMTEADGET TLFPK+ARLRNLTYSAPLYVDV+ R ++
Sbjct: 106 RQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMK 165
Query: 561 KGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGS 740
KGHDCEEVTET ++ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYDQGGYFIINGS
Sbjct: 166 KGHDCEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGS 225
Query: 741 EKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRMLSRTSAKGGS 920
EKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRPAS+MFVRMLSR AKGGS
Sbjct: 226 EKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGS 285
Query: 921 SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI 1100
SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI
Sbjct: 286 SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI 345
Query: 1101 QNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHR 1280
QNQQVALDYIGKRGATVGVTKEKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIHR
Sbjct: 346 QNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHR 405
Query: 1281 LLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNL 1460
LL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQKCVDNGK+VNL
Sbjct: 406 LLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNL 465
Query: 1461 QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGRE 1640
QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGRE
Sbjct: 466 QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 525
Query: 1641 GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 1820
GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TEN
Sbjct: 526 GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTEN 585
Query: 1821 FEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELR 2000
FEEISPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQ+DVNTEVGV+RDIRLKELR
Sbjct: 586 FEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELR 645
Query: 2001 LYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFXXXXXXXXXXXX 2174
LYTDYGRCSRPLFIVE QRLLIKK+ I+ALQ ET EEGWHDLVAKGF
Sbjct: 646 LYTDYGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETT 705
Query: 2175 XXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG 2354
NDLI AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG
Sbjct: 706 MISMTINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG 765
Query: 2355 KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYN 2534
KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYN
Sbjct: 766 KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYN 825
Query: 2535 QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLD 2714
QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLD
Sbjct: 826 QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLD 885
Query: 2715 DDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSESGMVDQVLLT 2894
DDGLAPPGTRVSGEDVIIGKTSP+P DD QGQ ++RYT+RDHSTS+RHSESGMVDQVLLT
Sbjct: 886 DDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQ-ATRYTKRDHSTSLRHSESGMVDQVLLT 944
Query: 2895 TNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGITPDIIVNPH 3074
TNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWT+EGITPDIIVNPH
Sbjct: 945 TNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPH 1004
Query: 3075 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 3254
AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG
Sbjct: 1005 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 1064
Query: 3255 HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 3434
HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER
Sbjct: 1065 HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 1124
Query: 3435 DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCKNKTDIVQVHI 3614
DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1125 DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1184
Query: 3615 PYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
PYACKLLFQELMAMAIAPRM+T+D K KDQK++
Sbjct: 1185 PYACKLLFQELMAMAIAPRMLTQDNKTGKDQKKR 1218
>XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Oryza sativa
Japonica Group] ABF97884.1 DNA-directed RNA polymerase II
135 kDa polypeptide, putative, expressed [Oryza sativa
Japonica Group] EAY91202.1 hypothetical protein OsI_12811
[Oryza sativa Indica Group]
Length = 1222
Score = 2212 bits (5732), Expect = 0.0
Identities = 1087/1174 (92%), Positives = 1130/1174 (96%), Gaps = 2/1174 (0%)
Frame = +3
Query: 201 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG 380
DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG
Sbjct: 50 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG 109
Query: 381 RPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPLYVDVTKRTIR 560
R ++F ET++KISFGQIYLS+PMMTEADGET TLFPK+ARLRNLTYSAPLYVDV+ R ++
Sbjct: 110 RQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMK 169
Query: 561 KGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGS 740
KGHDCEEVTET ++ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYDQGGYFIINGS
Sbjct: 170 KGHDCEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGS 229
Query: 741 EKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRMLSRTSAKGGS 920
EKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRPAS+MFVRMLSR AKGGS
Sbjct: 230 EKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGS 289
Query: 921 SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI 1100
SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI
Sbjct: 290 SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI 349
Query: 1101 QNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHR 1280
QNQQVALDYIGKRGATVGVTKEKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIHR
Sbjct: 350 QNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHR 409
Query: 1281 LLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNL 1460
LL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQKCVDNGK+VNL
Sbjct: 410 LLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNL 469
Query: 1461 QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGRE 1640
QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGRE
Sbjct: 470 QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 529
Query: 1641 GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 1820
GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TEN
Sbjct: 530 GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTEN 589
Query: 1821 FEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELR 2000
FEEISPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQ+DVNTEVGV+RDIRLKELR
Sbjct: 590 FEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELR 649
Query: 2001 LYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFXXXXXXXXXXXX 2174
LYTDYGRCSRPLFIVE QRLLIKK+ I+ALQ ET EEGWHDLVAKGF
Sbjct: 650 LYTDYGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETT 709
Query: 2175 XXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG 2354
NDLI AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG
Sbjct: 710 MISMTINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG 769
Query: 2355 KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYN 2534
KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYN
Sbjct: 770 KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYN 829
Query: 2535 QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLD 2714
QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLD
Sbjct: 830 QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLD 889
Query: 2715 DDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSESGMVDQVLLT 2894
DDGLAPPGTRVSGEDVIIGKTSP+P DD QGQ ++RYT+RDHSTS+RHSESGMVDQVLLT
Sbjct: 890 DDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQ-ATRYTKRDHSTSLRHSESGMVDQVLLT 948
Query: 2895 TNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGITPDIIVNPH 3074
TNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWT+EGITPDIIVNPH
Sbjct: 949 TNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPH 1008
Query: 3075 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 3254
AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG
Sbjct: 1009 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 1068
Query: 3255 HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 3434
HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER
Sbjct: 1069 HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 1128
Query: 3435 DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCKNKTDIVQVHI 3614
DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1129 DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1188
Query: 3615 PYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
PYACKLLFQELMAMAIAPRM+T+D K KDQK++
Sbjct: 1189 PYACKLLFQELMAMAIAPRMLTQDNKTGKDQKKR 1222
>XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Amborella
trichopoda] ERN20505.1 hypothetical protein
AMTR_s00068p00181410 [Amborella trichopoda]
Length = 1190
Score = 2204 bits (5712), Expect = 0.0
Identities = 1087/1183 (91%), Positives = 1135/1183 (95%), Gaps = 2/1183 (0%)
Frame = +3
Query: 174 EDDYSMYNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 353
+DDY +++EEITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIEI
Sbjct: 6 DDDYV---NEDEEITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIEI 62
Query: 354 RPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPLY 533
RPESQHNPGR +DF+ETIYKISFGQIYLS+PMMTE+DGET TLFPKAARLRNLTYSAPLY
Sbjct: 63 RPESQHNPGRQADFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLY 122
Query: 534 VDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQ 713
VDVTKR I+KGHD EE+ E Q+ KVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQ
Sbjct: 123 VDVTKRVIKKGHDHEELAEQQELTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQ 182
Query: 714 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRML 893
GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAESQN+P S+MFVRML
Sbjct: 183 GGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSMFVRML 242
Query: 894 SRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLR 1073
SRTS+KGGSSGQYIRATLPYIRA+IPIIIVFRALGFVADKDILEHICYDFSDTQMMELLR
Sbjct: 243 SRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLR 302
Query: 1074 PSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKA 1253
PSLEEAFVIQNQQVALDYIGKRG+TVGVTKEKRIKYA+EILQKEMLPHVGVGEYCETKKA
Sbjct: 303 PSLEEAFVIQNQQVALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKA 362
Query: 1254 YYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKC 1433
YYFGYIIHRLL+CALGRRPEDDRDHYGNKRLDLAGPLLG LFR +FRKLTRDV+SYVQKC
Sbjct: 363 YYFGYIIHRLLVCALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKC 422
Query: 1434 VDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLR 1613
VDNGK+VNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLTFASTLSHLR
Sbjct: 423 VDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLR 482
Query: 1614 RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILE 1793
RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILE
Sbjct: 483 RLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILE 542
Query: 1794 FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVI 1973
FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNP+LLVKTLRQLRRQVDVNTEVGVI
Sbjct: 543 FLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVI 602
Query: 1974 RDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFXXX 2147
RDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKK DI+ALQ E+ +EGWHDLVAKGF
Sbjct: 603 RDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEY 662
Query: 2148 XXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSP 2327
+DL++AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSP
Sbjct: 663 VDTEEEETTMISMTISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSP 722
Query: 2328 RNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV 2507
RNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV
Sbjct: 723 RNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV 782
Query: 2508 AISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGM 2687
AISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGM
Sbjct: 783 AISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGM 842
Query: 2688 RHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSES 2867
RHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P+ ++ QGQ +SRYTRRDHSTS+RHSES
Sbjct: 843 RHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITQEEMQGQ-ASRYTRRDHSTSLRHSES 901
Query: 2868 GMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGI 3047
GMVDQVLLTTNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWTVEGI
Sbjct: 902 GMVDQVLLTTNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGI 961
Query: 3048 TPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQM 3227
TPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQM
Sbjct: 962 TPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQM 1021
Query: 3228 RGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDG 3407
RGFETMYNGHTGR+L+AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDG
Sbjct: 1022 RGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDG 1081
Query: 3408 GLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCKN 3587
GLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CG+IA+ANLKKNSFECRGCKN
Sbjct: 1082 GLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKN 1141
Query: 3588 KTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
KTDI+QVHIPYACKLLFQELMAMAIAPRM TK+ K PKD K+K
Sbjct: 1142 KTDIIQVHIPYACKLLFQELMAMAIAPRMFTKEEKKPKDHKKK 1184
>XP_010108197.1 DNA-directed RNA polymerase II subunit [Morus notabilis] EXC18122.1
DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 2202 bits (5707), Expect = 0.0
Identities = 1088/1191 (91%), Positives = 1133/1191 (95%), Gaps = 9/1191 (0%)
Frame = +3
Query: 171 MEDDYS---MYNDDE---EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 332
MEDD+ YNDD+ EEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
Sbjct: 1 MEDDHEYDQQYNDDDDDDEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD 60
Query: 333 ESADIEIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNL 512
ESADIEIRPESQHNPG SDF+ETIYKISFGQIYLS+PMMTE+DGET TLFPKAARLRNL
Sbjct: 61 ESADIEIRPESQHNPGHQSDFVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNL 120
Query: 513 TYSAPLYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 692
TYSAPLYVDVTKR I+KGHD EEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTEL
Sbjct: 121 TYSAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL 180
Query: 693 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPAS 872
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAESQNRP S
Sbjct: 181 GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS 240
Query: 873 TMFVRMLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDT 1052
TMFVRMLSRTS+KGGSSGQYIRATLPYIRA+IPIIIVFRALGFVADKDILEHICYDFSDT
Sbjct: 241 TMFVRMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDT 300
Query: 1053 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGE 1232
QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYA+EILQKEMLPHVG GE
Sbjct: 301 QMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGE 360
Query: 1233 YCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 1412
+CETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV
Sbjct: 361 FCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV 420
Query: 1413 KSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFA 1592
+ YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+A
Sbjct: 421 RGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA 480
Query: 1593 STLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGS 1772
STLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGS
Sbjct: 481 STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS 540
Query: 1773 AANPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDV 1952
AA PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PD+LVKTLR+LRR+VDV
Sbjct: 541 AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDV 600
Query: 1953 NTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEE-GWHDL 2123
NTEVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKK+DI+ALQ ET EE GWHDL
Sbjct: 601 NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDL 660
Query: 2124 VAKGFXXXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIP 2303
V+ GF NDL+ AR NP+EAYSETYTHCEIHPSLILGVCASIIP
Sbjct: 661 VSNGFIEYIDTEEEETTMISMTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIP 720
Query: 2304 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 2483
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
Sbjct: 721 FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL 780
Query: 2484 PAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 2663
PAGINAIVAI+CYSGYNQEDSVIMNQS+IDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
Sbjct: 781 PAGINAIVAIACYSGYNQEDSVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP 840
Query: 2664 NRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHS 2843
+R NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P+ D+ QGQ +SRYTRRDHS
Sbjct: 841 DRSNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHS 900
Query: 2844 TSMRHSESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQED 3023
S+RHSE+G+VDQVLLTTNADGLRFVKVR+RS+R+PQIGDKFSSRHGQKGT+GMTYTQED
Sbjct: 901 ISLRHSENGIVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQED 960
Query: 3024 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 3203
MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
Sbjct: 961 MPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA 1020
Query: 3204 LHKCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 3383
LHKCGYQMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
Sbjct: 1021 LHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP 1080
Query: 3384 AEGRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNS 3563
AEGRSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CG+IA+ANLKKNS
Sbjct: 1081 AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS 1140
Query: 3564 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM+TKD+K DQK+K
Sbjct: 1141 FECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKPLNDQKKK 1191
>XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus
communis] EEF43271.1 DNA-directed RNA polymerase II
subunit, putative [Ricinus communis]
Length = 1194
Score = 2201 bits (5703), Expect = 0.0
Identities = 1086/1185 (91%), Positives = 1132/1185 (95%), Gaps = 3/1185 (0%)
Frame = +3
Query: 171 MEDDYSMYNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 350
+ +DY ++DE+EITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE
Sbjct: 11 LNEDYE--DEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 68
Query: 351 IRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPL 530
IRPESQHNPG SDF ETIYKISFGQIYLS+PMMTE+DGET TLFPKAARLRNLTYSAPL
Sbjct: 69 IRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 128
Query: 531 YVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 710
YVDVTKR I+KGHD EEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD
Sbjct: 129 YVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 188
Query: 711 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRM 890
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAESQNRP STMFVRM
Sbjct: 189 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRM 248
Query: 891 LSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 1070
LSRTSAKGGSSGQYIRATLPYIR +IPIIIVFRALGFVADKDILEHICYDFSDTQMMELL
Sbjct: 249 LSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 308
Query: 1071 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKK 1250
RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYA+EILQKEMLPHVGVGEYCETKK
Sbjct: 309 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKK 368
Query: 1251 AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQK 1430
AYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQK
Sbjct: 369 AYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 428
Query: 1431 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHL 1610
CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHL
Sbjct: 429 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHL 488
Query: 1611 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 1790
RRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PIL
Sbjct: 489 RRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPIL 548
Query: 1791 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGV 1970
EFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PD+LVKTLR+LRR+VDVNTEVGV
Sbjct: 549 EFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGV 608
Query: 1971 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQE---TQEEGWHDLVAKGFX 2141
+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKKKDI ALQ+ ++E GWHDLVAKGF
Sbjct: 609 VRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFI 668
Query: 2142 XXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 2321
+DL+ AR NP+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 669 EYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQ 728
Query: 2322 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 2501
SPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 729 SPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 788
Query: 2502 IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 2681
IVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R NTM
Sbjct: 789 IVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTM 848
Query: 2682 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHS 2861
GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P+ ++ QGQ S+RYTRRDHS S+RHS
Sbjct: 849 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQ-SARYTRRDHSISLRHS 907
Query: 2862 ESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVE 3041
E+G+VDQVLLTTNADGLRFVKVR+RSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWTVE
Sbjct: 908 ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 967
Query: 3042 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 3221
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 968 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1027
Query: 3222 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 3401
QMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1028 QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1087
Query: 3402 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGC 3581
DGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CG+IA+ANLKKNSFECRGC
Sbjct: 1088 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGC 1147
Query: 3582 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
KNKTDIVQVHIPYACKLLFQELMAMAIAPRM+TKD+K KDQK+K
Sbjct: 1148 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKPTKDQKKK 1192
>XP_015889960.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ziziphus
jujuba]
Length = 1191
Score = 2201 bits (5702), Expect = 0.0
Identities = 1086/1189 (91%), Positives = 1132/1189 (95%), Gaps = 7/1189 (0%)
Frame = +3
Query: 171 MEDDYS---MYNDD-EEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 338
MEDD YNDD EEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES
Sbjct: 1 MEDDQEYDQQYNDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDES 60
Query: 339 ADIEIRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTY 518
ADIEIRPESQHNPG SDF ETIYKISFGQIYLS+PMMTE+DGET TLFPKAARLRNLTY
Sbjct: 61 ADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTY 120
Query: 519 SAPLYVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 698
SAPLYVDVTKR I+KGHD EEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGE
Sbjct: 121 SAPLYVDVTKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGE 180
Query: 699 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTM 878
CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAESQNRP STM
Sbjct: 181 CPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTM 240
Query: 879 FVRMLSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQM 1058
FVRMLSRTS+KGGSSGQYIRATLPYIRA+IPIIIVFRALGFVADKDILEHICYDF+DTQM
Sbjct: 241 FVRMLSRTSSKGGSSGQYIRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFTDTQM 300
Query: 1059 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYC 1238
MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYA+EILQKEMLPHVGVGE+C
Sbjct: 301 MELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFC 360
Query: 1239 ETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKS 1418
ETKKAYYFGYIIHRLLLCALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+
Sbjct: 361 ETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRG 420
Query: 1419 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFAST 1598
YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+AST
Sbjct: 421 YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYAST 480
Query: 1599 LSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 1778
LSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA
Sbjct: 481 LSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAA 540
Query: 1779 NPILEFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNT 1958
PILEFLEEW TENFEEISPAVIPQATKIFVNGCWVGIHR+PD+LVKTLR+LRR+VDVNT
Sbjct: 541 YPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNT 600
Query: 1959 EVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQE---TQEEGWHDLVA 2129
EVGV+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLIKKKDI ALQ+ ++ GWHDLV+
Sbjct: 601 EVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVS 660
Query: 2130 KGFXXXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFP 2309
KGF NDL+ AR NP+EAYS+TYTHCEIHPSLILGVCASIIPFP
Sbjct: 661 KGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFP 720
Query: 2310 DHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 2489
DHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA
Sbjct: 721 DHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPA 780
Query: 2490 GINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR 2669
GINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R
Sbjct: 781 GINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR 840
Query: 2670 ENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTS 2849
NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P+ D+ QGQ +SRYTRRDHS S
Sbjct: 841 ANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHSIS 900
Query: 2850 MRHSESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMP 3029
+RHSE+G+VDQVLLTTNADGLRFVKVR+RSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMP
Sbjct: 901 LRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMP 960
Query: 3030 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 3209
WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH
Sbjct: 961 WTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALH 1020
Query: 3210 KCGYQMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 3389
+CGYQMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE
Sbjct: 1021 RCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAE 1080
Query: 3390 GRSRDGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFE 3569
GRSRDGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE+CG+IA+ANLKKNSFE
Sbjct: 1081 GRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE 1140
Query: 3570 CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM+TK++K K+QK+K
Sbjct: 1141 CRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKEVKPLKNQKKK 1189
>XP_020199539.1 DNA-directed RNA polymerase II subunit RPB2 [Aegilops tauschii subsp.
tauschii]
Length = 1221
Score = 2196 bits (5691), Expect = 0.0
Identities = 1078/1173 (91%), Positives = 1124/1173 (95%), Gaps = 2/1173 (0%)
Frame = +3
Query: 201 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG 380
DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG
Sbjct: 50 DEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG 109
Query: 381 RPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPLYVDVTKRTIR 560
R ++F ET++KISFGQIYLS+PMMTEADGET TLFPK+ARLRNLTYSAPLYVDV+ R ++
Sbjct: 110 RQAEFAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVVK 169
Query: 561 KGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGS 740
KGHDCEEVTET ++ KVFIGKVPIMLRSSYCTL+Q SEKDLTELGECPYDQGGYF+INGS
Sbjct: 170 KGHDCEEVTETAEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFVINGS 229
Query: 741 EKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRMLSRTSAKGGS 920
EKVLIAQEKMSTNHVYVFKKRQPNKFAYV EVRSMAE+QNRPAS+MFVRMLSR AKGGS
Sbjct: 230 EKVLIAQEKMSTNHVYVFKKRQPNKFAYVGEVRSMAENQNRPASSMFVRMLSRAGAKGGS 289
Query: 921 SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI 1100
SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI
Sbjct: 290 SGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVI 349
Query: 1101 QNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKKAYYFGYIIHR 1280
QNQQVALDYIGKRGATVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIHR
Sbjct: 350 QNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHR 409
Query: 1281 LLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNL 1460
LL+CALGRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQKCVDNGK+VNL
Sbjct: 410 LLMCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNL 469
Query: 1461 QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGRE 1640
QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGRE
Sbjct: 470 QFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGRE 529
Query: 1641 GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 1820
GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TEN
Sbjct: 530 GKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTEN 589
Query: 1821 FEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELR 2000
FEEISPAVIPQA KIFVNGCWVGIHRNPDLLVKTLR+LRRQ+DVNTEVGV+RDIRLKELR
Sbjct: 590 FEEISPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELR 649
Query: 2001 LYTDYGRCSRPLFIVEKQRLLIKKKDIQALQ--ETQEEGWHDLVAKGFXXXXXXXXXXXX 2174
LYTDYGRCSRPLFIVE QRLLIKKK I+ALQ ET +EGWHDLVAKGF
Sbjct: 650 LYTDYGRCSRPLFIVENQRLLIKKKHIRALQQRETPDEGWHDLVAKGFIEYIDTEEEETT 709
Query: 2175 XXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG 2354
DL +R NP EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG
Sbjct: 710 MISMTIRDLETSRHNPGEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMG 769
Query: 2355 KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYN 2534
KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYN
Sbjct: 770 KQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYN 829
Query: 2535 QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLD 2714
QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRENTMGMRHGSYDKLD
Sbjct: 830 QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLD 889
Query: 2715 DDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHSESGMVDQVLLT 2894
DDGLAPPGTRVSGEDVIIGKTSP+P DD QGQ ++RY++RDHSTS+RHSESGMVDQVLLT
Sbjct: 890 DDGLAPPGTRVSGEDVIIGKTSPIPQDDAQGQ-ATRYSKRDHSTSLRHSESGMVDQVLLT 948
Query: 2895 TNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVEGITPDIIVNPH 3074
TNADGLRFVKVRMRSVR+PQIGDKFSSRHGQKGT+GMTYTQEDMPWT+EGITPDIIVNPH
Sbjct: 949 TNADGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPH 1008
Query: 3075 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 3254
AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG
Sbjct: 1009 AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNG 1068
Query: 3255 HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 3434
HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER
Sbjct: 1069 HTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER 1128
Query: 3435 DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGCKNKTDIVQVHI 3614
DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCG+IA+ANLKKNSFECRGCKNKTDIVQVHI
Sbjct: 1129 DCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHI 1188
Query: 3615 PYACKLLFQELMAMAIAPRMMTKDIKLPKDQKR 3713
PYACKLLFQELMAMAIAPRM+T ++K +D+ R
Sbjct: 1189 PYACKLLFQELMAMAIAPRMLTHEVKGARDKHR 1221
>XP_019162258.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ipomoea nil]
Length = 1190
Score = 2196 bits (5690), Expect = 0.0
Identities = 1084/1185 (91%), Positives = 1129/1185 (95%), Gaps = 4/1185 (0%)
Frame = +3
Query: 174 EDDYSM-YNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 350
E++Y YNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE
Sbjct: 5 EEEYEQQYNDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIE 64
Query: 351 IRPESQHNPGRPSDFLETIYKISFGQIYLSRPMMTEADGETQTLFPKAARLRNLTYSAPL 530
IRPESQHNPG SDF ETIYKI+FGQIYLS+PMMTE+DGET TLFPKAARLRNLTYSAPL
Sbjct: 65 IRPESQHNPGHQSDFAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPL 124
Query: 531 YVDVTKRTIRKGHDCEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 710
YVDV+KR I+KGHD EEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD
Sbjct: 125 YVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYD 184
Query: 711 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASTMFVRM 890
QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAESQNRP STMFVRM
Sbjct: 185 QGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRM 244
Query: 891 LSRTSAKGGSSGQYIRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELL 1070
LSRTSAKGGSSGQYIRATLPYIR +IPIIIVFRALGFVADKDILEHICYDF+DT MMELL
Sbjct: 245 LSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTPMMELL 304
Query: 1071 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAREILQKEMLPHVGVGEYCETKK 1250
RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYA++ILQKEMLPHVGVGEYCETKK
Sbjct: 305 RPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKK 364
Query: 1251 AYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQK 1430
AYYFGYIIHRLLLCA+GRR EDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDV+SYVQK
Sbjct: 365 AYYFGYIIHRLLLCAIGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQK 424
Query: 1431 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTFASTLSHL 1610
CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHL
Sbjct: 425 CVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHL 484
Query: 1611 RRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPIL 1790
RRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PIL
Sbjct: 485 RRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPIL 544
Query: 1791 EFLEEWSTENFEEISPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGV 1970
EFLEEW TENFEEISPAVIPQATKIFVNG WVGIHR+PD+LV+TLR+LRR+VDVNTEVGV
Sbjct: 545 EFLEEWGTENFEEISPAVIPQATKIFVNGGWVGIHRDPDMLVRTLRRLRRRVDVNTEVGV 604
Query: 1971 IRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKKDIQALQE---TQEEGWHDLVAKGFX 2141
+RDIRLKELR+YTDYGRCSRPLFIVEKQRLLI+K+DIQALQ+ +E GWHDLVAKGF
Sbjct: 605 VRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIRKRDIQALQQRESPEEGGWHDLVAKGFI 664
Query: 2142 XXXXXXXXXXXXXXXXXNDLINARQNPKEAYSETYTHCEIHPSLILGVCASIIPFPDHNQ 2321
NDLI AR NP EAYS TYTHCEIHPSLILGVCASIIPFPDHNQ
Sbjct: 665 EYIDTEEEETTMISMTINDLIQARLNPGEAYSVTYTHCEIHPSLILGVCASIIPFPDHNQ 724
Query: 2322 SPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 2501
SPRNTYQSAMGKQAMGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA
Sbjct: 725 SPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINA 784
Query: 2502 IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTM 2681
IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R NTM
Sbjct: 785 IVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTM 844
Query: 2682 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPMPPDDTQGQVSSRYTRRDHSTSMRHS 2861
GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKT+P+ DD QGQ ++RYT+RDHSTS+RHS
Sbjct: 845 GMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQ-NARYTKRDHSTSLRHS 903
Query: 2862 ESGMVDQVLLTTNADGLRFVKVRMRSVRVPQIGDKFSSRHGQKGTIGMTYTQEDMPWTVE 3041
E+GMVDQVLLTTNADGLRFVKVR+RS+R+PQIGDKFSSRHGQKGT+GMTYTQEDMPWTVE
Sbjct: 904 ETGMVDQVLLTTNADGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 963
Query: 3042 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 3221
GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 964 GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1023
Query: 3222 QMRGFETMYNGHTGRKLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 3401
QMRGFETMYNGHTGR+LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1024 QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1083
Query: 3402 DGGLRFGEMERDCMIAHGAAFFLKERLFDQSDAYRVHVCEKCGIIAVANLKKNSFECRGC 3581
DGGLRFGEMERDCMIAHGAA FLKERLFDQSDAYRVHVCE CG+IA+ANLKK+SFECRGC
Sbjct: 1084 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGC 1143
Query: 3582 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMMTKDIKLPKDQKRK 3716
KNKTDIVQVHIPYACKLLFQELMAMAIAPRM+TKD+K KDQK+K
Sbjct: 1144 KNKTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1188