BLASTX nr result

ID: Alisma22_contig00006654 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00006654
         (408 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010917264.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like...    61   3e-08
XP_010932475.1 PREDICTED: probable E3 ubiquitin-protein ligase R...    59   2e-07
XP_010257498.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like...    57   9e-07
KOM42822.1 hypothetical protein LR48_Vigan05g042600 [Vigna angul...    56   1e-06
XP_010243363.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like...    56   1e-06
JAT46076.1 E3 ubiquitin-protein ligase RING1-like [Anthurium amn...    56   1e-06
JAT45254.1 E3 ubiquitin-protein ligase RING1-like [Anthurium amn...    55   2e-06

>XP_010917264.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Elaeis
           guineensis] XP_010917265.1 PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Elaeis guineensis]
          Length = 336

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
 Frame = +2

Query: 119 SGGSPPTSVAPAVGVPPGERSLDARRATTS------TYWCYECDAGVNV--ALTAVPLLC 274
           S   PP     A G   GE    +   + +      T+WC+ECD  V +  + +  PLLC
Sbjct: 4   SAALPPNQNNHAAGAGGGEGCAASSGGSAAAHQQPLTFWCHECDMSVTLLPSSSPAPLLC 63

Query: 275 PICQGDFLEQMELPRAQDQGRERTLVLP-SDED 370
           P C+GDFLE+MELP +    R  TL L  SD D
Sbjct: 64  PQCRGDFLEEMELPPSPPPHRSNTLTLSLSDSD 96


>XP_010932475.1 PREDICTED: probable E3 ubiquitin-protein ligase RHC1A [Elaeis
           guineensis] XP_010932476.1 PREDICTED: probable E3
           ubiquitin-protein ligase RHC1A [Elaeis guineensis]
          Length = 345

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
 Frame = +2

Query: 44  ATSEADPPKTNQVRKPNGDAQRNAMSGGSPPTSVAPAVGVPPGERSLDARRATTSTYWCY 223
           ++S A PP  N      G  +  A S G  P +  P                   T+WC+
Sbjct: 2   SSSAALPPNQNNHATGMGGGEGYAASSGGSPAAHQPL------------------TFWCH 43

Query: 224 ECDAGVNV---ALTAVPLLCPICQGDFLEQMELPRAQDQGRERTLVLP---SDEDGQS 379
           ECD  V +   + +  PLLCP C+G FLE+MELP        +TL L    SD D  S
Sbjct: 44  ECDMSVTLLPSSSSPPPLLCPECRGGFLEEMELPAPPPPHHPQTLTLTLSLSDSDSDS 101


>XP_010257498.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nelumbo
           nucifera] XP_010257499.1 PREDICTED: E3 ubiquitin-protein
           ligase RING1-like [Nelumbo nucifera] XP_010257500.1
           PREDICTED: E3 ubiquitin-protein ligase RING1-like
           [Nelumbo nucifera]
          Length = 345

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 21/33 (63%), Positives = 27/33 (81%)
 Frame = +2

Query: 212 YWCYECDAGVNVALTAVPLLCPICQGDFLEQME 310
           YWC+ECD  V++   + PLLCP+CQGDFLE+ME
Sbjct: 21  YWCHECDVSVSLLPCSPPLLCPLCQGDFLEEME 53


>KOM42822.1 hypothetical protein LR48_Vigan05g042600 [Vigna angularis]
          Length = 294

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 25/62 (40%), Positives = 32/62 (51%)
 Frame = +2

Query: 143 VAPAVGVPPGERSLDARRATTSTYWCYECDAGVNVALTAVPLLCPICQGDFLEQMELPRA 322
           + P    PP      A      TYWC+ECD  V++ L   PLLCP C   FLE M+ P +
Sbjct: 66  IPPPPPPPPSPPMATAAEPEAKTYWCHECDMSVSLTLLPSPLLCPHCHTSFLELMDSPFS 125

Query: 323 QD 328
           Q+
Sbjct: 126 QN 127


>XP_010243363.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nelumbo
           nucifera] XP_010243364.1 PREDICTED: E3 ubiquitin-protein
           ligase RING1-like [Nelumbo nucifera]
          Length = 348

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/67 (40%), Positives = 38/67 (56%)
 Frame = +2

Query: 116 MSGGSPPTSVAPAVGVPPGERSLDARRATTSTYWCYECDAGVNVALTAVPLLCPICQGDF 295
           MS  +  T+   A G      S + ++A    YWC+ECD  V+++  +  L CP CQGDF
Sbjct: 1   MSSANATTATVTATGAGATTTSSNRQQA----YWCHECDMSVSLSPNSPSLHCPFCQGDF 56

Query: 296 LEQMELP 316
           LE+ME P
Sbjct: 57  LEEMESP 63


>JAT46076.1 E3 ubiquitin-protein ligase RING1-like [Anthurium amnicola]
           JAT48282.1 E3 ubiquitin-protein ligase RING1-like
           [Anthurium amnicola] JAT60557.1 E3 ubiquitin-protein
           ligase RING1-like [Anthurium amnicola]
          Length = 395

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
 Frame = +2

Query: 203 TSTYWCYECDAGVNVALTAVPLLCPICQGDFLEQMELPRAQDQ---GRERTLVLP 358
           ++TYWC+ECD GV + L+  PL+CP C G FLE+ME  R + +    R RTL  P
Sbjct: 18  SATYWCHECDMGVALPLSPPPLVCPHCGGGFLEEMEELRPRRRPAPSRSRTLSPP 72


>JAT45254.1 E3 ubiquitin-protein ligase RING1-like [Anthurium amnicola]
          Length = 394

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
 Frame = +2

Query: 203 TSTYWCYECDAGVNVALTAVPLLCPICQGDFLEQMELPRAQDQ---GRERTLVLP 358
           ++TYWC+ECD GV + L+  PL+CP C G FLE+ME  R + +    R RTL  P
Sbjct: 18  SATYWCHECDMGVALRLSPPPLVCPHCGGCFLEEMEELRPRRRPAPSRSRTLSPP 72


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