BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00006279
         (780 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMZ56096.1 hypothetical protein ZOSMA_99G00260 [Zostera marina]        69   9e-10
XP_006347924.1 PREDICTED: nuclear pore complex protein NUP62 iso...    64   6e-08
XP_015164492.1 PREDICTED: nuclear pore complex protein NUP62 iso...    64   6e-08
XP_013636660.1 PREDICTED: nuclear pore complex protein NUP62 [Br...    62   3e-07
XP_006293763.1 hypothetical protein CARUB_v10022723mg [Capsella ...    59   3e-06
CDX74703.1 BnaA05g04490D [Brassica napus]                              59   3e-06
XP_018440001.1 PREDICTED: nuclear pore complex protein NUP62 [Ra...    57   8e-06

>KMZ56096.1 hypothetical protein ZOSMA_99G00260 [Zostera marina]
          Length = 799

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 54/123 (43%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
 Frame = +3

Query: 6   SQTSFGFGSAASTVS-PSQPSFGFGXXXXXXXXXXXXIGFGXXXXXXXXXXXQPSFGFGX 182
           SQ SFGFGSA STVS PSQPSFGFG            +              QPSFGFG 
Sbjct: 346 SQPSFGFGSAPSTVSAPSQPSFGFGSAPTTASAATTTV------------TSQPSFGFGS 393

Query: 183 XXXXXXXXXXXXLGFG-APASASSQ-------PSFGYGSTATPASATPSQPSFSLS--TS 332
                        GF  AP++ SS        PSFG+ S   PA + PSQPSFS S  TS
Sbjct: 394 APSAVSASSQLSFGFNNAPSAVSSSATTVASLPSFGFSSA--PAVSAPSQPSFSFSSLTS 451

Query: 333 AAS 341
           AA+
Sbjct: 452 AAT 454



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 58/140 (41%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
 Frame = +3

Query: 6   SQTSFGFGSAASTVSP-----SQPSFGFGXXXXXXXXXXXX------IGFGXXXXXXXXX 152
           SQ+ FGFGS  ST+S      SQPSFGFG                   GFG         
Sbjct: 269 SQSQFGFGSVPSTISTVTTAASQPSFGFGSAPSIVSAATTTAVSQPSFGFGNAPSTVSVP 328

Query: 153 XXQPSFGFGXXXXXXXXXXXXXLGFG-APA--SASSQPSFGYGSTATPASA----TPSQP 311
             QPSFGFG              GFG AP+  SA SQPSFG+GS  T ASA      SQP
Sbjct: 329 S-QPSFGFGNAPSTVSAPSQPSFGFGSAPSTVSAPSQPSFGFGSAPTTASAATTTVTSQP 387

Query: 312 SFSL-----STSAASQPLFG 356
           SF       + SA+SQ  FG
Sbjct: 388 SFGFGSAPSAVSASSQLSFG 407


>XP_006347924.1 PREDICTED: nuclear pore complex protein NUP62 isoform X2 [Solanum
           tuberosum]
          Length = 798

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   SSQTSFGFGSAASTVSPSQPSFGFGXXXXXXXXXXXXIGFGXXXXXXXXXXXQPSFGFGX 182
           SS  SFGFG++ ++ S S PSFGFG             GFG            PSFGFG 
Sbjct: 54  SSAPSFGFGTSTTSAS-SAPSFGFGTSTTSASSAPS-FGFGTSTTSASSA---PSFGFGT 108

Query: 183 XXXXXXXXXXXXLGFG-APASASSQPSFGYGSTATPASATPSQPSFSLSTSAASQPLFG 356
                        GFG +  SASS PSFG+G++ T AS+ PS    + +TSA+S P FG
Sbjct: 109 STTSASSAPS--FGFGTSTTSASSAPSFGFGTSTTSASSAPSFGFGTSTTSASSAPSFG 165


>XP_015164492.1 PREDICTED: nuclear pore complex protein NUP62 isoform X1 [Solanum
           tuberosum]
          Length = 842

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
 Frame = +3

Query: 3   SSQTSFGFGSAASTVSPSQPSFGFGXXXXXXXXXXXXIGFGXXXXXXXXXXXQPSFGFGX 182
           SS  SFGFG++ ++ S S PSFGFG             GFG            PSFGFG 
Sbjct: 54  SSAPSFGFGTSTTSAS-SAPSFGFGTSTTSASSAPS-FGFGTSTTSASSA---PSFGFGT 108

Query: 183 XXXXXXXXXXXXLGFG-APASASSQPSFGYGSTATPASATPSQPSFSLSTSAASQPLFG 356
                        GFG +  SASS PSFG+G++ T AS+ PS    + +TSA+S P FG
Sbjct: 109 STTSASSAPS--FGFGTSTTSASSAPSFGFGTSTTSASSAPSFGFGTSTTSASSAPSFG 165


>XP_013636660.1 PREDICTED: nuclear pore complex protein NUP62 [Brassica oleracea
           var. oleracea]
          Length = 752

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 46/121 (38%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
 Frame = +3

Query: 3   SSQTSFGFGSAASTVSPS-QPSFGFG-XXXXXXXXXXXXIGFGXXXXXXXXXXXQPSFGF 176
           +  T FGFGS A T S S  PSFGFG              GFG            PSFGF
Sbjct: 40  NQSTGFGFGSTAQTASSSAAPSFGFGATASAPASSTTPSFGFG-ATASAPAASTTPSFGF 98

Query: 177 GXXXXXXXXXXXXXLGFGAPAS---ASSQPSFGYGSTAT-PASATPSQPSFSLSTSAASQ 344
           G              GFGA AS   AS+ PSFG+G+T++ PAS+T     F  + S  + 
Sbjct: 99  GATSSAPASSTTPSFGFGATASAPAASTTPSFGFGATSSAPASSTTPSFGFGATASTVTA 158

Query: 345 P 347
           P
Sbjct: 159 P 159



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 46/125 (36%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
 Frame = +3

Query: 3   SSQTSFGFGSAAST-VSPSQPSFGFGXXXXXXXXXXXX-IGFGXXXXXXXXXXXQPSFGF 176
           S+  SFGFG+ AS   S + PSFGFG              GFG            PSFGF
Sbjct: 57  SAAPSFGFGATASAPASSTTPSFGFGATASAPAASTTPSFGFGATSSAPASSTT-PSFGF 115

Query: 177 GXXXXXXXXXXXXXLGFGAPASA---SSQPSFGYGSTAT--PASATPSQPSFSLSTSAAS 341
           G              GFGA +SA   S+ PSFG+G+TA+   A A+ + PSF     A++
Sbjct: 116 GATASAPAASTTPSFGFGATSSAPASSTTPSFGFGATASTVTAPASSATPSFGFGAPAST 175

Query: 342 QPLFG 356
              FG
Sbjct: 176 GFGFG 180


>XP_006293763.1 hypothetical protein CARUB_v10022723mg [Capsella rubella]
           EOA26661.1 hypothetical protein CARUB_v10022723mg
           [Capsella rubella]
          Length = 723

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 45/117 (38%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
 Frame = +3

Query: 6   SQTSFGFGSAASTV--SPSQPSFGFGXXXXXXXXXXXXIGFGXXXXXXXXXXXQPSFGFG 179
           S T FGFGS AS+   S +  SFGFG             GFG            PSFGFG
Sbjct: 46  SSTGFGFGSTASSTPASSTSSSFGFGASSTPS------FGFGSSASST------PSFGFG 93

Query: 180 XXXXXXXXXXXXXLGFGAPASASSQPSFGYGSTATPASA-TPSQPSFSLSTSAASQP 347
                         GFGA AS+S      +GS+ T ASA +P+   F   TS+ASQP
Sbjct: 94  SSASSTPASTTPSFGFGANASSSGSAPSLFGSSTTNASAPSPASSPFGFVTSSASQP 150


>CDX74703.1 BnaA05g04490D [Brassica napus]
          Length = 736

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 50/134 (37%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
 Frame = +3

Query: 3   SSQTSFGFGSAASTVSPSQ-PSFGFGXXXXXXXXXXXX-IGFGXXXXXXXXXXXQPSFGF 176
           S+  SFGFG+ AS  + S  PSFGFG              GFG            PSFGF
Sbjct: 76  STTPSFGFGANASAPAASTTPSFGFGATSSAPTASTTPSFGFGATSSAPTASTT-PSFGF 134

Query: 177 GXXXXXXXXXXXXXLGFGAPASA---SSQPSFGYGSTAT-----PASATPSQPSFS---- 320
           G              GFGA +SA   S+ PSFG+G TA+      +SATPS  +FS    
Sbjct: 135 GATSSAPASSTTPSFGFGATSSAPASSTTPSFGFGGTASTVTAPASSATPSGSAFSSSLF 194

Query: 321 ---LSTSAASQPLF 353
               S +++S PLF
Sbjct: 195 SAPSSAASSSSPLF 208


>XP_018440001.1 PREDICTED: nuclear pore complex protein NUP62 [Raphanus sativus]
          Length = 787

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 46/127 (36%), Positives = 57/127 (44%), Gaps = 9/127 (7%)
 Frame = +3

Query: 3   SSQTSFGFGSAAST-VSPSQPSFGFGXXXXXXXXXXXX-IGFGXXXXXXXXXXXQPSFGF 176
           +  T FGFG+ AS   S + PSFGFG              GFG            PSFGF
Sbjct: 41  NQSTGFGFGANASAPASSTTPSFGFGASASAPTSSATPSFGFGASASAPASSAT-PSFGF 99

Query: 177 GXXXXXXXXXXXXXLGFGAPASAS-----SQPSFGYGSTATPAS--ATPSQPSFSLSTSA 335
           G              GFGA A+AS     + PSFG+G+TA  AS  A+ + PSF     A
Sbjct: 100 GASAPAPTSSAAPSFGFGASATASGPAASTTPSFGFGATAPTASTPASSAAPSFGFGAPA 159

Query: 336 ASQPLFG 356
           ++   FG
Sbjct: 160 STGFGFG 166