BLASTX nr result
ID: Alisma22_contig00006242
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00006242
(2637 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_020103739.1 probable RNA polymerase II transcription factor B... 712 0.0
XP_010913638.1 PREDICTED: probable RNA polymerase II transcripti... 706 0.0
XP_008789679.1 PREDICTED: probable RNA polymerase II transcripti... 703 0.0
XP_010928645.1 PREDICTED: probable RNA polymerase II transcripti... 703 0.0
XP_008789678.1 PREDICTED: probable RNA polymerase II transcripti... 700 0.0
XP_017700274.1 PREDICTED: probable RNA polymerase II transcripti... 699 0.0
XP_008800215.1 PREDICTED: probable RNA polymerase II transcripti... 696 0.0
XP_009414712.1 PREDICTED: probable RNA polymerase II transcripti... 690 0.0
KMZ67631.1 General transcription factor IIH subunit [Zostera mar... 679 0.0
JAT46830.1 putative RNA polymerase II transcription factor B sub... 666 0.0
OAY75981.1 putative RNA polymerase II transcription factor B sub... 664 0.0
XP_011628233.1 PREDICTED: probable RNA polymerase II transcripti... 663 0.0
ERN19104.1 hypothetical protein AMTR_s00061p00135540 [Amborella ... 663 0.0
ONK79246.1 uncharacterized protein A4U43_C01F4410 [Asparagus off... 657 0.0
XP_010913639.1 PREDICTED: probable RNA polymerase II transcripti... 653 0.0
XP_010644655.1 PREDICTED: probable RNA polymerase II transcripti... 651 0.0
XP_002276057.1 PREDICTED: probable RNA polymerase II transcripti... 650 0.0
JAT49604.1 putative RNA polymerase II transcription factor B sub... 633 0.0
XP_019051904.1 PREDICTED: probable RNA polymerase II transcripti... 622 0.0
XP_015650975.1 PREDICTED: probable RNA polymerase II transcripti... 607 0.0
>XP_020103739.1 probable RNA polymerase II transcription factor B subunit 1-1 [Ananas
comosus]
Length = 618
Score = 712 bits (1838), Expect = 0.0
Identities = 366/577 (63%), Positives = 441/577 (76%), Gaps = 18/577 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAV+N A KYK +VKE GIPGVL M E RF F PND RS KL VDFRTIKGHKFSK+G+
Sbjct: 1 MAVINMAVKYKTTVKEHGIPGVLKMMEDRFAFVPNDPRSAMKLKVDFRTIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPS------------- 1946
KQ LL++ D KG GYIFEF++F+DRNVCRDFVG +LG+F +V PS
Sbjct: 61 KQALLNLTQDAEKGVGYIFEFDNFSDRNVCRDFVGKVLGKFQSVTPSKPNEQSVPEKPAA 120
Query: 1945 -GHTA-LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
H LST EMERRMKLL EDSEL+KLH QFVI GVLTE EFWATRK+LL+ D +K +K
Sbjct: 121 LSHVEQLSTVEMERRMKLLREDSELQKLHKQFVISGVLTESEFWATRKSLLDDDENKASK 180
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
Q+ GFKSA+LADVRP TDGRTNKVTF+LTPEIIHQIFAEKPAVHRAFL FVP KM+EKDF
Sbjct: 181 QQAGFKSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLNFVPTKMTEKDF 240
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL RTKN AVFLK DDIL NEAR KI+RVDPT+DM AD+
Sbjct: 241 WTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILANEARCKIRRVDPTLDMEADV 300
Query: 1411 GDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVA 1235
GDDY+H+ D FRDG ++ D D E+ RR+LSQDLNRH VVLEGR+LD E GDT+ VA
Sbjct: 301 GDDYIHLPDHGIFRDGSKETMDADYEIARRTLSQDLNRHAAVVLEGRALDVELGDTRTVA 360
Query: 1234 EALAASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQH 1055
EALA S++ +D P+E+ N+ER+ +VSR++EIDDL+AP++LP+APL IKDPREYFDSQH
Sbjct: 361 EALARSKQESSSDLPDENVNMERLAKVSRMTEIDDLQAPRSLPYAPLCIKDPREYFDSQH 420
Query: 1054 ANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLN 881
ANA++ LG++G GM +S ++ Y L + ++ G P++QPE ALK L+ LN
Sbjct: 421 ANALKALGDSG-GMKSINCNMSTEEVYLYLRRQISEVKTRGLEIPVIQPEAALKVLDGLN 479
Query: 880 QHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVK 701
QHLSS ++H G NP ES+LD LP +TR+EL+ +W SI ELLQHFWSS+PIT+ +L++KV
Sbjct: 480 QHLSSTRYHLGKNPQESVLDRLPHRTRDELMHHWMSIQELLQHFWSSYPITTAYLYNKVL 539
Query: 700 RLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
RL+ AMS IY+ L+EIK SVQ+DFRHQVSL VQPM Q
Sbjct: 540 RLKDAMSQIYQKLQEIKESVQSDFRHQVSLFVQPMLQ 576
>XP_010913638.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Elaeis guineensis]
Length = 606
Score = 706 bits (1821), Expect = 0.0
Identities = 359/577 (62%), Positives = 436/577 (75%), Gaps = 18/577 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAV+N AAKYK +VKEPG PGVL M+E +F F PND RS KL+VDFR IKGHKFSK+G+
Sbjct: 1 MAVINMAAKYKTTVKEPGTPGVLRMSEDKFIFVPNDPRSAMKLNVDFRNIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA--------- 1934
KQ LL++ D+ KG GYIFEF++F+DRNVCRDFVG +LG+F + S
Sbjct: 61 KQALLNLTQDSEKGGGYIFEFDNFSDRNVCRDFVGKVLGKFQAMMSSKQNEQLVPEKPAA 120
Query: 1933 ------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
LSTTEME RMKLL EDSEL+KLH QFVI GVLTE EFWATRK+LL+ DA + K
Sbjct: 121 TVHGEQLSTTEMELRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTAK 180
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
QR GFKSA+LADVRP TDGRTNKVTF+LTPEIIHQIFAEKPAVHRAFL FVP+KM+EKDF
Sbjct: 181 QRAGFKSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLNFVPSKMTEKDF 240
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL RTKN AVFLK D+IL NEAR KI+RVDPT+DM AD+
Sbjct: 241 WTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDEILANEARHKIRRVDPTLDMEADI 300
Query: 1411 GDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVA 1235
GDDY+H+ D RDG ++ D ++E RR+LSQDLNRH VVLEGR+LD E GDT+ A
Sbjct: 301 GDDYIHLPDHGILRDGSKETADAENEFARRTLSQDLNRHAAVVLEGRALDVELGDTRTAA 360
Query: 1234 EALAASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQH 1055
EALA S++ T+ +E N ER+E+VSR++EI+DL+AP +LPFAPL IKDPREYFDSQ
Sbjct: 361 EALARSKQELSTEISDEKTNQERMEKVSRMTEIEDLQAPCSLPFAPLCIKDPREYFDSQQ 420
Query: 1054 ANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLN 881
ANA + LG+ G G+T L ++AY LLE + ++ G + P+VQPE ALK LN LN
Sbjct: 421 ANAFKALGDTGGGITPVDCSLKTEEAYIYLLEQISEVKVRGLNKPVVQPEAALKVLNGLN 480
Query: 880 QHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVK 701
+LSS K+H G NP E +LD LP +T++EL+ +WTSI ELL+HFWSS+P+T+ +L++KV
Sbjct: 481 PYLSSTKYHLGKNPQECVLDRLPNRTKDELMHHWTSIQELLRHFWSSYPVTTAYLYNKVL 540
Query: 700 RLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
RL+ AM+ IY L+EIK SVQ+DFRHQVSLLVQPM Q
Sbjct: 541 RLKDAMAQIYHKLQEIKESVQSDFRHQVSLLVQPMLQ 577
>XP_008789679.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Phoenix dactylifera]
Length = 606
Score = 703 bits (1815), Expect = 0.0
Identities = 357/577 (61%), Positives = 441/577 (76%), Gaps = 18/577 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAV+N AAKYK +VKEPGIPGVL M+E++ F PND RS KL+VDFR+IKGHKFSK+G+
Sbjct: 1 MAVINMAAKYKTTVKEPGIPGVLKMSEEKIIFIPNDPRSAMKLNVDFRSIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA--------- 1934
KQ LL++ D+ KG GYIFEF+ F+DRNVCRDFVG +LG+F + S
Sbjct: 61 KQALLNLTQDSEKGGGYIFEFDKFSDRNVCRDFVGKVLGKFQAMMSSKQNEQPVPEKPAA 120
Query: 1933 ------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
LSTTEME RMKLL EDSEL+KLH QFVI GVLTE EFWATRK+LL+ DA + +K
Sbjct: 121 TMHGEQLSTTEMEHRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTSK 180
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
Q+ GFKSA+LADVRP TDGRTNKVTF+LTPEIIHQIFAEKPAVH AFL FVP+KM+EKDF
Sbjct: 181 QQAGFKSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHWAFLNFVPSKMTEKDF 240
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL RTKN AVFLK DDIL NEARRKI+RVDPT+DM ADL
Sbjct: 241 WTKYCRAEYLHRTKNSVVAAAEAAEDEELAVFLKNDDILANEARRKIRRVDPTLDMEADL 300
Query: 1411 GDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVA 1235
GDDY+H+ D RDG ++ D ++++ RR+LSQDLNRH VVLEGR+LD E GDT+ VA
Sbjct: 301 GDDYIHLPDHGILRDGSKETVDAENDIARRTLSQDLNRHAAVVLEGRALDVELGDTRTVA 360
Query: 1234 EALAASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQH 1055
EALA S++ ++ +E N ER++RVSR++EI+DL+AP +LP+APL IKDPREYFDSQ
Sbjct: 361 EALARSKQESSAETSDEKTNQERLKRVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQQ 420
Query: 1054 ANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLN 881
ANA++ LG+ + + LS ++AY L+E + ++ G +NP+VQPE ALK LN LN
Sbjct: 421 ANALKALGDTDARIKPIDCSLSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALKVLNGLN 480
Query: 880 QHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVK 701
Q+LSS K+H G NP ES+LD LP +T++EL+ +WTSI ELL+HFWSS+PIT+ +L++KV
Sbjct: 481 QYLSSTKYHLGKNPQESVLDRLPNRTKDELMHHWTSIQELLRHFWSSYPITTTYLYNKVL 540
Query: 700 RLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
RL+ AM+ IY L+E K SVQ+DFRHQVS LVQPM Q
Sbjct: 541 RLKDAMTQIYHKLQETKESVQSDFRHQVSRLVQPMLQ 577
>XP_010928645.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Elaeis guineensis]
Length = 607
Score = 703 bits (1815), Expect = 0.0
Identities = 357/578 (61%), Positives = 442/578 (76%), Gaps = 19/578 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAV+N AAKYK VKEPGIPGVL M+E++F F PND RS KL+VDFR+IKGHKFSK+G+
Sbjct: 1 MAVINMAAKYKTMVKEPGIPGVLKMSEEKFIFIPNDPRSAMKLNVDFRSIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA--------- 1934
KQ LL++ D+ KG GYIFEF++F++RNVCRDFVG +LG+F + S
Sbjct: 61 KQALLNLTQDSEKGGGYIFEFDNFSNRNVCRDFVGKVLGKFQALMSSKQNEQPVPEKPAA 120
Query: 1933 ------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
LSTTEME RMKLL EDSEL+KLH QFVI GVLTE EFWATRK+LL+ DA + +K
Sbjct: 121 AIHGEQLSTTEMEHRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTSK 180
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
Q+ GFKSA+LADVRPLTDGRTNKVTF+LTPEIIHQIFAEKPAVHRAFL FVP+KM+EKDF
Sbjct: 181 QQAGFKSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLNFVPSKMTEKDF 240
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL RTKN AVFLK DDIL NEARRKI+RVDPT+DM ADL
Sbjct: 241 WTKYCRAEYLHRTKNSVAAAAEAANDEELAVFLKNDDILANEARRKIRRVDPTLDMEADL 300
Query: 1411 GDDYLHILDENF-RDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVA 1235
GDDY+H+ D +DG ++ D ++++ RR+LSQDLNRH VVLEGR+LD E GDT+ VA
Sbjct: 301 GDDYIHLPDHGLPQDGSKETADAENDIARRTLSQDLNRHAAVVLEGRALDVELGDTRTVA 360
Query: 1234 EALAASRKG-RHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQ 1058
EALA S++ ++ +E N ER++RVSR++EI+DL+AP +LP+APL IKDPREYFD Q
Sbjct: 361 EALARSKRAVSFAETSDEKTNQERLKRVSRMTEIEDLQAPYSLPYAPLCIKDPREYFDLQ 420
Query: 1057 HANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWL 884
ANA++ G+ +G LS ++AY L+E + ++ G +NP+VQPE ALK LN L
Sbjct: 421 QANALKAFGDTDAGTKPIDCSLSTEEAYVHLMEQISEMKVRGLNNPVVQPEAALKVLNGL 480
Query: 883 NQHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKV 704
NQ+LSS K+H G NP ES+LD LP +T++EL+ +WTSI ELL+HFWSS+PIT+ +L++KV
Sbjct: 481 NQYLSSTKYHLGKNPQESVLDRLPNRTKDELMHHWTSIQELLRHFWSSYPITTAYLYNKV 540
Query: 703 KRLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
RL+ AM+ IY L+E K SVQ+DFRHQVS LVQPM Q
Sbjct: 541 LRLKDAMAQIYHKLQETKESVQSDFRHQVSRLVQPMLQ 578
>XP_008789678.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Phoenix dactylifera]
Length = 607
Score = 700 bits (1807), Expect = 0.0
Identities = 357/578 (61%), Positives = 442/578 (76%), Gaps = 19/578 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAV+N AAKYK +VKEPGIPGVL M+E++ F PND RS KL+VDFR+IKGHKFSK+G+
Sbjct: 1 MAVINMAAKYKTTVKEPGIPGVLKMSEEKIIFIPNDPRSAMKLNVDFRSIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA--------- 1934
KQ LL++ D+ KG GYIFEF+ F+DRNVCRDFVG +LG+F + S
Sbjct: 61 KQALLNLTQDSEKGGGYIFEFDKFSDRNVCRDFVGKVLGKFQAMMSSKQNEQPVPEKPAA 120
Query: 1933 ------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
LSTTEME RMKLL EDSEL+KLH QFVI GVLTE EFWATRK+LL+ DA + +K
Sbjct: 121 TMHGEQLSTTEMEHRMKLLREDSELQKLHKQFVIGGVLTESEFWATRKSLLDDDAQRTSK 180
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
Q+ GFKSA+LADVRP TDGRTNKVTF+LTPEIIHQIFAEKPAVH AFL FVP+KM+EKDF
Sbjct: 181 QQAGFKSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHWAFLNFVPSKMTEKDF 240
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL RTKN AVFLK DDIL NEARRKI+RVDPT+DM ADL
Sbjct: 241 WTKYCRAEYLHRTKNSVVAAAEAAEDEELAVFLKNDDILANEARRKIRRVDPTLDMEADL 300
Query: 1411 GDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVA 1235
GDDY+H+ D RDG ++ D ++++ RR+LSQDLNRH VVLEGR+LD E GDT+ VA
Sbjct: 301 GDDYIHLPDHGILRDGSKETVDAENDIARRTLSQDLNRHAAVVLEGRALDVELGDTRTVA 360
Query: 1234 EALAASRKGRHT-DSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQ 1058
EALA S++ + ++ +E N ER++RVSR++EI+DL+AP +LP+APL IKDPREYFDSQ
Sbjct: 361 EALARSKQAESSAETSDEKTNQERLKRVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQ 420
Query: 1057 HANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWL 884
ANA++ LG+ + + LS ++AY L+E + ++ G +NP+VQPE ALK LN L
Sbjct: 421 QANALKALGDTDARIKPIDCSLSTEEAYIYLMEQISEVKVRGLNNPVVQPEAALKVLNGL 480
Query: 883 NQHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKV 704
NQ+LSS K+H G NP ES+LD LP +T++EL+ +WTSI ELL+HFWSS+PIT+ +L++KV
Sbjct: 481 NQYLSSTKYHLGKNPQESVLDRLPNRTKDELMHHWTSIQELLRHFWSSYPITTTYLYNKV 540
Query: 703 KRLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
RL+ AM+ IY L+E K SVQ+DFRHQVS LVQPM Q
Sbjct: 541 LRLKDAMTQIYHKLQETKESVQSDFRHQVSRLVQPMLQ 578
>XP_017700274.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Phoenix dactylifera]
Length = 606
Score = 699 bits (1803), Expect = 0.0
Identities = 359/577 (62%), Positives = 436/577 (75%), Gaps = 18/577 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAV+N AAKYK +VKEPG PGVL M+E +F F PND RS KL+V+FR IKGHKFSK+G+
Sbjct: 1 MAVINMAAKYKTTVKEPGTPGVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA--------- 1934
KQ LL++ D+ KG GYIFEF++F+DRNVCRDFVG +LG+F V S
Sbjct: 61 KQALLNLTQDSEKGGGYIFEFDNFSDRNVCRDFVGKVLGKFQAVTSSRQNEQPVPEKPAA 120
Query: 1933 ------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
LSTTEMERRMKLL EDSEL+KLH QFVI GVLTE EFWATRK+LL+ + K
Sbjct: 121 TVHSEQLSTTEMERRMKLLWEDSELQKLHKQFVIGGVLTESEFWATRKSLLDDVVQRTPK 180
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
QR GF+SA+LADVRP TDGRTNKVTF+LTPEIIHQIFAEKPAVHRAFL FVP KM+EKDF
Sbjct: 181 QRAGFRSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLNFVPIKMTEKDF 240
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL RTKN AVFLK DDIL NEAR KI+RVDPT+DM ADL
Sbjct: 241 WTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILANEARCKIRRVDPTLDMEADL 300
Query: 1411 GDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVA 1235
GDDY+H+ D RDG ++ D ++EL RR+LSQDLNRH TVVLEGR+LD E GDT+ A
Sbjct: 301 GDDYIHLPDHGILRDGSKETADAENELARRTLSQDLNRHATVVLEGRALDVELGDTRTAA 360
Query: 1234 EALAASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQH 1055
EALA S++ T++ +E N ER+E+VSR++EI+DL+AP +LP+APL IKDPREYFDSQ
Sbjct: 361 EALARSKQELCTETSDEKTNQERLEKVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQQ 420
Query: 1054 ANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLN 881
ANAV+ LG+ G+G+ L ++AY LLE + ++ G +N +VQPE LK LN LN
Sbjct: 421 ANAVKALGDTGAGIKPVDFSLKTEEAYTYLLEQISEVKVRGLNNLVVQPEATLKVLNGLN 480
Query: 880 QHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVK 701
+LSS K+H G P E +LD LP +T++ELL +WTSI ELL+HFWSS+PIT+ +L++KV
Sbjct: 481 PYLSSTKYHLGKKPQECVLDMLPNRTKDELLHHWTSIQELLRHFWSSYPITTAYLYNKVL 540
Query: 700 RLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
RL+ AM+ IY L+EIK +VQ+DFRHQVSLLVQPM Q
Sbjct: 541 RLKDAMTHIYHKLQEIKEAVQSDFRHQVSLLVQPMLQ 577
>XP_008800215.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Phoenix dactylifera]
Length = 607
Score = 696 bits (1795), Expect = 0.0
Identities = 359/578 (62%), Positives = 436/578 (75%), Gaps = 19/578 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAV+N AAKYK +VKEPG PGVL M+E +F F PND RS KL+V+FR IKGHKFSK+G+
Sbjct: 1 MAVINMAAKYKTTVKEPGTPGVLRMSEDKFIFVPNDPRSAMKLNVNFRNIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA--------- 1934
KQ LL++ D+ KG GYIFEF++F+DRNVCRDFVG +LG+F V S
Sbjct: 61 KQALLNLTQDSEKGGGYIFEFDNFSDRNVCRDFVGKVLGKFQAVTSSRQNEQPVPEKPAA 120
Query: 1933 ------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
LSTTEMERRMKLL EDSEL+KLH QFVI GVLTE EFWATRK+LL+ + K
Sbjct: 121 TVHSEQLSTTEMERRMKLLWEDSELQKLHKQFVIGGVLTESEFWATRKSLLDDVVQRTPK 180
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
QR GF+SA+LADVRP TDGRTNKVTF+LTPEIIHQIFAEKPAVHRAFL FVP KM+EKDF
Sbjct: 181 QRAGFRSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLNFVPIKMTEKDF 240
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL RTKN AVFLK DDIL NEAR KI+RVDPT+DM ADL
Sbjct: 241 WTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILANEARCKIRRVDPTLDMEADL 300
Query: 1411 GDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVA 1235
GDDY+H+ D RDG ++ D ++EL RR+LSQDLNRH TVVLEGR+LD E GDT+ A
Sbjct: 301 GDDYIHLPDHGILRDGSKETADAENELARRTLSQDLNRHATVVLEGRALDVELGDTRTAA 360
Query: 1234 EALAASRKGR-HTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQ 1058
EALA S++ T++ +E N ER+E+VSR++EI+DL+AP +LP+APL IKDPREYFDSQ
Sbjct: 361 EALARSKQAELCTETSDEKTNQERLEKVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQ 420
Query: 1057 HANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWL 884
ANAV+ LG+ G+G+ L ++AY LLE + ++ G +N +VQPE LK LN L
Sbjct: 421 QANAVKALGDTGAGIKPVDFSLKTEEAYTYLLEQISEVKVRGLNNLVVQPEATLKVLNGL 480
Query: 883 NQHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKV 704
N +LSS K+H G P E +LD LP +T++ELL +WTSI ELL+HFWSS+PIT+ +L++KV
Sbjct: 481 NPYLSSTKYHLGKKPQECVLDMLPNRTKDELLHHWTSIQELLRHFWSSYPITTAYLYNKV 540
Query: 703 KRLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
RL+ AM+ IY L+EIK +VQ+DFRHQVSLLVQPM Q
Sbjct: 541 LRLKDAMTHIYHKLQEIKEAVQSDFRHQVSLLVQPMLQ 578
>XP_009414712.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Musa acuminata subsp. malaccensis]
Length = 602
Score = 690 bits (1781), Expect = 0.0
Identities = 351/574 (61%), Positives = 438/574 (76%), Gaps = 15/574 (2%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MA ++K AKYK +VKEPGIPGVL M E FTFTP+D RS KL VDFR IKGHKFSK+G+
Sbjct: 1 MAAISKVAKYKTTVKEPGIPGVLNMMEDVFTFTPHDPRSAMKLRVDFRNIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTV------QPSGHTA--- 1934
KQ LL++ D+ KG GYIFEFN+F +RN CRDFVG +LG+F + +P+ +
Sbjct: 61 KQALLNLTQDSEKGGGYIFEFNNFTERNDCRDFVGKVLGKFQALVSKQNDEPTSEKSAVS 120
Query: 1933 ---LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTKQRT 1763
LST EMERRMKLL EDSEL+KLH + VI VLTE EFWATRKNLL+ D+ + KQRT
Sbjct: 121 LEQLSTIEMERRMKLLREDSELQKLHKELVIGNVLTESEFWATRKNLLDDDSDRTLKQRT 180
Query: 1762 GFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDFWTK 1583
GFKSA+LAD+RP TDGRTNKVTF+LTPEIIHQIFAEKPAVHRAFL FVP+KM+EKDFWTK
Sbjct: 181 GFKSAMLADIRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLNFVPSKMTEKDFWTK 240
Query: 1582 YCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADLGDD 1403
YCRAEYL RTKN AVFLK DDIL +EARRKI+RVDPT+DM ADLGDD
Sbjct: 241 YCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILADEARRKIRRVDPTLDMEADLGDD 300
Query: 1402 YLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAEAL 1226
Y+H+ D RDG ++ D +++L RR+L+QD+NRH VVLEGR+LD E GDT+AVAEAL
Sbjct: 301 YIHLPDHGILRDGSKETADSENDLARRTLAQDVNRHAAVVLEGRALDIELGDTRAVAEAL 360
Query: 1225 AASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQHANA 1046
A S++ D+ +E+ NLER ERVSR++EI+DL+AP +LP+APL IKDPREYFDSQ NA
Sbjct: 361 ARSKQESSADTLDENSNLERQERVSRMTEIEDLQAPHSLPYAPLCIKDPREYFDSQQVNA 420
Query: 1045 VRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHAL--EGFSNPIVQPEEALKTLNWLNQHL 872
++ LG G+G L++++AY L+ + + +G NPIVQ E A K L+ L Q +
Sbjct: 421 LKALGGTGAGSKTIDYSLNSEEAYSYLMHQISEVKAQGLHNPIVQSEVACKVLSGLTQQI 480
Query: 871 SSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKRLR 692
SS ++H G NP ES+LD LPK+T++E++L+WTSI ELL+HFWSS+PIT+ +L++KV RL+
Sbjct: 481 SSTRYHLGKNPQESVLDRLPKRTKDEIMLHWTSIQELLRHFWSSYPITTSYLYNKVLRLK 540
Query: 691 GAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
AM+ IY+ L+ IK VQ+DFRHQ+SLLVQPM Q
Sbjct: 541 SAMTDIYQKLKAIK-DVQSDFRHQISLLVQPMLQ 573
>KMZ67631.1 General transcription factor IIH subunit [Zostera marina]
Length = 584
Score = 679 bits (1753), Expect = 0.0
Identities = 345/570 (60%), Positives = 433/570 (75%), Gaps = 10/570 (1%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
M++V K AKYKP++KEPGIPGVL+MTE +F FTPND SNA LDV+FR+IKGHKFSK+G+
Sbjct: 1 MSIVRKPAKYKPAIKEPGIPGVLLMTEDKFAFTPNDPNSNANLDVEFRSIKGHKFSKDGS 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRF----STVQPSGHTALSTTE 1919
KQILL++ +D+ KG GYIFEF++FA+RN CRD+VG +LG+ S V PSGHT+LST E
Sbjct: 61 KQILLNLTYDSQKGGGYIFEFDNFANRNFCRDYVGTVLGKLQCAPSAVPPSGHTSLSTAE 120
Query: 1918 MERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTKQRTGFKSAILA 1739
ME RMKLL E KLHMQFVI GVLTE EFWATRKNLLE ++ K TKQ+TG K+AILA
Sbjct: 121 MEHRMKLLSE-----KLHMQFVIGGVLTESEFWATRKNLLENNSIKATKQKTGLKNAILA 175
Query: 1738 DVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDFWTKYCRAEYLL 1559
D RPLTDGRTNKVTF+L PEIIHQIFAEKPAVHRA+L VP+KM+EKDFW KYCRAEYL
Sbjct: 176 DFRPLTDGRTNKVTFSLNPEIIHQIFAEKPAVHRAYLMHVPSKMTEKDFWRKYCRAEYLY 235
Query: 1558 RTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADLGDDYLH--ILD 1385
RTKN A+FLK DDIL +E RRKI+RVDPT+DMAAD GDD++H I D
Sbjct: 236 RTKNSIAATAEAAEDEELAIFLKHDDILADEIRRKIRRVDPTLDMAADQGDDFVHLSISD 295
Query: 1384 EN--FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAEALAASRK 1211
+ RDG ND+ D ++EL++RSL+QDLNRHG VVLEGR+LD E GDT+ VAEALA S+K
Sbjct: 296 DQGIVRDGINDTGDIENELSKRSLAQDLNRHGAVVLEGRTLDVELGDTRTVAEALAQSKK 355
Query: 1210 GRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQHANAVRTLG 1031
+S + + ER++R S +EIDDL+ P+ +PFAPL IKDP++YFD Q AN VR
Sbjct: 356 ESSFNS-DATAQFERLDRFSHNAEIDDLQEPRKIPFAPLCIKDPQDYFDFQQANGVRASS 414
Query: 1030 EAGSGMTQHIQMLSAKQAYDSLLENLHAL--EGFSNPIVQPEEALKTLNWLNQHLSSNKF 857
+ GM +S +AY ++ L + G S+PI++PE ALKT NWLNQ +SS+K+
Sbjct: 415 DFSFGMKSDGSKMSIDEAYKIIIAELDEVIKNGISDPIMRPEAALKTFNWLNQQVSSSKY 474
Query: 856 HRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKRLRGAMSP 677
H G NP +S+LD+LP+ T+ ELL ++ S+ ELL+HFW+S+PIT+ +LH KV +L+ AMS
Sbjct: 475 HMGKNPQDSVLDSLPRDTKAELLHHYRSVEELLKHFWASYPITTSYLHAKVVKLKEAMSD 534
Query: 676 IYKALEEIKSSVQTDFRHQVSLLVQPMHQV 587
IY LE IK SV++++RH VS LVQ MHQ+
Sbjct: 535 IYLKLEMIKKSVKSEYRHSVSQLVQQMHQM 564
>JAT46830.1 putative RNA polymerase II transcription factor B subunit 1-1
[Anthurium amnicola]
Length = 604
Score = 666 bits (1719), Expect = 0.0
Identities = 340/576 (59%), Positives = 434/576 (75%), Gaps = 17/576 (2%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAVV A KYKP+VKEPGIPG+L MTE RFTFTP+D+RS+ KLDV F IK H+F+KEG
Sbjct: 1 MAVVVMATKYKPAVKEPGIPGMLRMTEDRFTFTPSDKRSSTKLDVSFSKIKAHRFTKEGT 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA--------- 1934
KQ LL+I+HD+ KG GYIFEF+ F DRNVCRDFVG +LG+F T P G TA
Sbjct: 61 KQALLNILHDSEKGGGYIFEFDSFPDRNVCRDFVGKVLGKFQTPSP-GQTAQAVSESSTP 119
Query: 1933 -----LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTKQ 1769
LS TE+ERRMKLL +DSEL+KLH QFV+ GVLTE EFWATRKN+L+ D + +KQ
Sbjct: 120 VHGEQLSATELERRMKLLRDDSELQKLHRQFVMSGVLTEAEFWATRKNMLDIDTCRTSKQ 179
Query: 1768 RTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDFW 1589
RTGFKSAILADVRPLTDG++NKVTF+LT EIIHQIFAEKPAV +AFL FVP+KM+E DFW
Sbjct: 180 RTGFKSAILADVRPLTDGQSNKVTFSLTWEIIHQIFAEKPAVRQAFLNFVPSKMTENDFW 239
Query: 1588 TKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADLG 1409
KY +A++L RTKN AVFLK+DDI+ E+RRKI+RVDPT+DMAAD+G
Sbjct: 240 KKYFKADFLYRTKNTFAAAAEAAEDEELAVFLKQDDIVAAESRRKIRRVDPTLDMAADIG 299
Query: 1408 DDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAE 1232
DDY+H++D RDG ++ D D+EL +R++ QDLNRH VVLEGR LD E DT+AVAE
Sbjct: 300 DDYMHVMDHGILRDGNKETTDVDNELPQRTILQDLNRHAAVVLEGRVLDAELADTRAVAE 359
Query: 1231 ALAASRKGR-HTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQH 1055
ALA S++ + +ES NL+R++RV +++EI+DL+ +NLPF PL IKDPREYFDSQH
Sbjct: 360 ALARSKQVELSNEGSDESANLDRLKRVHQMTEIEDLQGSRNLPFTPLCIKDPREYFDSQH 419
Query: 1054 ANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE-GFSNPIVQPEEALKTLNWLNQ 878
ANA++ L E G+ L+ K+AYD L + + ++ G +P++QPE A + L+ LN+
Sbjct: 420 ANALKALLETGASTKFVNWSLNGKEAYDYLFDQISEVKVGLRDPVIQPEAAFEVLSGLNR 479
Query: 877 HLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKR 698
H+SS K+ G +P ES+L LP +T++++L +W SI ELL+HFWSS+PIT+ +L++KV R
Sbjct: 480 HVSSTKYDIGKDPHESVLGRLPNRTKDDILEHWASIQELLRHFWSSYPITTAYLYNKVTR 539
Query: 697 LRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
L+ AM+ IY LE IK SVQ+DFRHQVSLLV+PM Q
Sbjct: 540 LKDAMTQIYHKLEGIKESVQSDFRHQVSLLVKPMLQ 575
>OAY75981.1 putative RNA polymerase II transcription factor B subunit 1-1 [Ananas
comosus]
Length = 586
Score = 664 bits (1714), Expect = 0.0
Identities = 352/576 (61%), Positives = 425/576 (73%), Gaps = 17/576 (2%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAV+N A KYK +VKE GIPGVL M E RF F PND RS KL KFSK+G+
Sbjct: 1 MAVINMAVKYKTTVKEHGIPGVLKMMEDRFAFVPNDPRSAMKL----------KFSKDGS 50
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPS------------- 1946
KQ LL++ D KG GYIFEF++F+DRNVCRDFVG +LG+F +V PS
Sbjct: 51 KQALLNLTQDAEKGVGYIFEFDNFSDRNVCRDFVGKVLGKFQSVTPSKPNEQSVPEKPAA 110
Query: 1945 -GHTA-LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
H LST EMERRMKLL EDSEL+KLH QFVI GVLTE EFWATRK+LL+ D +K +K
Sbjct: 111 LSHVEQLSTVEMERRMKLLREDSELQKLHKQFVISGVLTESEFWATRKSLLDDDENKASK 170
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
Q+ GFKSA+LADVRP TDGRTNKVTF+LTPEIIHQIFAEKPAVHRAFL FVP KM+EKDF
Sbjct: 171 QQAGFKSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKPAVHRAFLNFVPTKMTEKDF 230
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL RTKN AVFLK DDIL NEAR KI+RVDPT+DM AD
Sbjct: 231 WTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILANEARCKIRRVDPTLDMEAD- 289
Query: 1411 GDDYLHILDENFRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAE 1232
D + FRDG ++ D D E+ RR+LSQDLNRH VVLEGR+LD E GDT+ VAE
Sbjct: 290 -DHGI------FRDGSKETMDADYEIARRTLSQDLNRHAAVVLEGRALDVELGDTRTVAE 342
Query: 1231 ALAASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQHA 1052
ALA S++ +D P+E+ N+ER+ +VSR++EIDDL+AP++LP+APL IKDPREYFDSQHA
Sbjct: 343 ALARSKQESSSDLPDENVNMERLAKVSRMTEIDDLQAPRSLPYAPLCIKDPREYFDSQHA 402
Query: 1051 NAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLNQ 878
NA++ LG++G GM +S ++ Y L + ++ G P++QPE ALK L+ LNQ
Sbjct: 403 NALKALGDSG-GMKSINCNMSTEEVYLYLRRQISEVKTRGLEIPVIQPEAALKVLDGLNQ 461
Query: 877 HLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKR 698
HLSS ++H G NP ES+LD LP +TR+EL+ +W SI ELLQHFWSS+PIT+ +L++KV R
Sbjct: 462 HLSSTRYHLGKNPQESVLDRLPHRTRDELMHHWMSIQELLQHFWSSYPITTAYLYNKVLR 521
Query: 697 LRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
L+ AMS IY+ L+EIK SVQ+DFRHQVSL VQPM Q
Sbjct: 522 LKDAMSQIYQKLQEIKESVQSDFRHQVSLFVQPMLQ 557
>XP_011628233.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-3 [Amborella trichopoda]
Length = 606
Score = 663 bits (1711), Expect = 0.0
Identities = 351/577 (60%), Positives = 427/577 (74%), Gaps = 19/577 (3%)
Frame = -3
Query: 2260 VVNKAAKYKPS-VKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGAK 2084
VV AKYK S K+PG+ GVL M + F F PND S+ KLDV FR IKGHKFSKEG+K
Sbjct: 5 VVTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSK 64
Query: 2083 QILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA---------- 1934
Q LL++ D KG GY+FEF +F DR+VCRD VG +LGR + PS +A
Sbjct: 65 QALLNLTQD--KGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVVPAQPTTQ 122
Query: 1933 ----LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTKQR 1766
LS EME+RM LL EDSEL+KLH Q VI GVLTE EFWATRKNLL+ A K +KQR
Sbjct: 123 HDNQLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASKQR 182
Query: 1765 TGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDFWT 1586
GFKSA+LADVRPLTDGRTNKVTF+LTPEIIHQIFAEKPAVH+AFL+FVP+KMSE+DFWT
Sbjct: 183 AGFKSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWT 242
Query: 1585 KYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADLGD 1406
KYCRAEYL RTKN AVFLK DDIL +EARRKI+RVDPTVDMAADLGD
Sbjct: 243 KYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGD 302
Query: 1405 DYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAEA 1229
DY H+ RDG +S D +SEL +R+L QDLNRH VVLEGR+LD E GDT+ VAEA
Sbjct: 303 DYSHLPGHGILRDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEA 362
Query: 1228 LAASRKGR-HTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQHA 1052
LA S++ T++ +E+EN +R+ERVS+++EI+DL+AP++LP+APL IKDPREYFDSQ A
Sbjct: 363 LARSKQAEVATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRA 422
Query: 1051 NAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLNQ 878
NA + G+ GSG+ + LS KQAY+SL + ++ GF +PIV P+ ALK LN +NQ
Sbjct: 423 NAFKATGDTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQ 482
Query: 877 HLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKR 698
LSS G NP ++LD LP +T+EELL +WTSI ELL+HFWSS+P+T+ LH KV R
Sbjct: 483 QLSSTDPQLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNR 542
Query: 697 LRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQV 587
++ AM+ IY+ L E+K SVQ++FRHQVSLLV+PM QV
Sbjct: 543 VKDAMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQV 579
>ERN19104.1 hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 663 bits (1711), Expect = 0.0
Identities = 351/577 (60%), Positives = 427/577 (74%), Gaps = 19/577 (3%)
Frame = -3
Query: 2260 VVNKAAKYKPS-VKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGAK 2084
VV AKYK S K+PG+ GVL M + F F PND S+ KLDV FR IKGHKFSKEG+K
Sbjct: 5 VVTMRAKYKASGPKDPGVAGVLTMRDDSFIFRPNDPSSSVKLDVSFRCIKGHKFSKEGSK 64
Query: 2083 QILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA---------- 1934
Q LL++ D KG GY+FEF +F DR+VCRD VG +LGR + PS +A
Sbjct: 65 QALLNLTQD--KGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQSAQVVPAQPTTQ 122
Query: 1933 ----LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTKQR 1766
LS EME+RM LL EDSEL+KLH Q VI GVLTE EFWATRKNLL+ A K +KQR
Sbjct: 123 HDNQLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLLDDAAHKASKQR 182
Query: 1765 TGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDFWT 1586
GFKSA+LADVRPLTDGRTNKVTF+LTPEIIHQIFAEKPAVH+AFL+FVP+KMSE+DFWT
Sbjct: 183 AGFKSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFVPSKMSERDFWT 242
Query: 1585 KYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADLGD 1406
KYCRAEYL RTKN AVFLK DDIL +EARRKI+RVDPTVDMAADLGD
Sbjct: 243 KYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGD 302
Query: 1405 DYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAEA 1229
DY H+ RDG +S D +SEL +R+L QDLNRH VVLEGR+LD E GDT+ VAEA
Sbjct: 303 DYSHLPGHGILRDGSKESVDSESELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEA 362
Query: 1228 LAASRKGR-HTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQHA 1052
LA S++ T++ +E+EN +R+ERVS+++EI+DL+AP++LP+APL IKDPREYFDSQ A
Sbjct: 363 LARSKQAEVATETSDETENQKRLERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRA 422
Query: 1051 NAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLNQ 878
NA + G+ GSG+ + LS KQAY+SL + ++ GF +PIV P+ ALK LN +NQ
Sbjct: 423 NAFKATGDTGSGVNKDCCHLSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQ 482
Query: 877 HLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKR 698
LSS G NP ++LD LP +T+EELL +WTSI ELL+HFWSS+P+T+ LH KV R
Sbjct: 483 QLSSTDPQLGKNPQATVLDMLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNR 542
Query: 697 LRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQV 587
++ AM+ IY+ L E+K SVQ++FRHQVSLLV+PM QV
Sbjct: 543 VKDAMAQIYRKLPEVKESVQSEFRHQVSLLVKPMLQV 579
>ONK79246.1 uncharacterized protein A4U43_C01F4410 [Asparagus officinalis]
Length = 596
Score = 657 bits (1696), Expect = 0.0
Identities = 341/577 (59%), Positives = 425/577 (73%), Gaps = 18/577 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNA-KLDVDFRTIKGHKFSKEG 2090
MA + KYK SVK+PG+PGVL M E++F F PND RS+A KL+V F+ IKGHKFSK+G
Sbjct: 1 MAAITMKVKYKTSVKDPGVPGVLKMNEEKFVFVPNDPRSSASKLNVGFKNIKGHKFSKDG 60
Query: 2089 AKQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA-------- 1934
+KQ LL++ D+ KG GYIFEF++F DRN CRDFVG +LG+F +V S
Sbjct: 61 SKQALLNLTLDSEKGGGYIFEFDNFPDRNACRDFVGKVLGKFQSVASSTKDQAVPEKSNA 120
Query: 1933 ------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTK 1772
LS +EMERRMKLL +DSEL+KLH +FVI GVLTE EFW + L K
Sbjct: 121 TVHAEQLSASEMERRMKLLRDDSELQKLHKEFVIGGVLTESEFWRQDRTL---------K 171
Query: 1771 QRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDF 1592
QRTG KSA+LADVRP DGR NKV F+LTPEIIHQIF EKPAV RAFL +VP KMSEKDF
Sbjct: 172 QRTGLKSAMLADVRPSADGRANKVMFSLTPEIIHQIFVEKPAVLRAFLNYVPRKMSEKDF 231
Query: 1591 WTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADL 1412
WTKYCRAEYL +KN A+FLK+DDIL NEARRK++RVDPT+DM ADL
Sbjct: 232 WTKYCRAEYLQWSKNSATVAAEAAEDEDLAIFLKQDDILANEARRKMRRVDPTLDMEADL 291
Query: 1411 GDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVA 1235
GDDYLH+ D RDG + D D+EL++RS+SQDLNRH VVLEGR LD E GDT+ VA
Sbjct: 292 GDDYLHLPDHGILRDGTKEVVDTDNELSKRSISQDLNRHAAVVLEGRPLDMELGDTRTVA 351
Query: 1234 EALAASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQH 1055
EALA SR+ ++ +E+E+LER+ERVSR++EI+DL+ PQNLP+APL IKDP EYFD Q
Sbjct: 352 EALARSRQAESNETSDENEDLERLERVSRMTEIEDLQGPQNLPYAPLCIKDPHEYFDCQL 411
Query: 1054 ANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLN 881
ANA++ LG++G+G+ L+A++AY L E + ++ G ++P+VQPE ALK LN LN
Sbjct: 412 ANALKALGDSGAGIKPDCS-LNAEEAYVYLAEQISEVKFRGLNDPVVQPEIALKVLNGLN 470
Query: 880 QHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVK 701
QH+SS KFH G +P ES+LD LP +T+EELL WTSI ELL+HFWSS+P+T+ +L+ KV
Sbjct: 471 QHISSTKFHFGKSPQESVLDTLPNRTKEELLHNWTSIQELLRHFWSSYPMTTTYLYHKVL 530
Query: 700 RLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
+L+ AM+ IY L++IK SVQ+D+RHQVSLLVQPM Q
Sbjct: 531 KLKDAMTQIYLKLQKIKESVQSDYRHQVSLLVQPMLQ 567
>XP_010913639.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Elaeis guineensis]
Length = 566
Score = 653 bits (1684), Expect = 0.0
Identities = 332/536 (61%), Positives = 405/536 (75%), Gaps = 18/536 (3%)
Frame = -3
Query: 2143 KLDVDFRTIKGHKFSKEGAKQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRF 1964
KL+VDFR IKGHKFSK+G+KQ LL++ D+ KG GYIFEF++F+DRNVCRDFVG +LG+F
Sbjct: 2 KLNVDFRNIKGHKFSKDGSKQALLNLTQDSEKGGGYIFEFDNFSDRNVCRDFVGKVLGKF 61
Query: 1963 STVQPSGHTA---------------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTED 1829
+ S LSTTEME RMKLL EDSEL+KLH QFVI GVLTE
Sbjct: 62 QAMMSSKQNEQLVPEKPAATVHGEQLSTTEMELRMKLLREDSELQKLHKQFVIGGVLTES 121
Query: 1828 EFWATRKNLLEGDASKRTKQRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKP 1649
EFWATRK+LL+ DA + KQR GFKSA+LADVRP TDGRTNKVTF+LTPEIIHQIFAEKP
Sbjct: 122 EFWATRKSLLDDDAQRTAKQRAGFKSAMLADVRPSTDGRTNKVTFSLTPEIIHQIFAEKP 181
Query: 1648 AVHRAFLRFVPNKMSEKDFWTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVN 1469
AVHRAFL FVP+KM+EKDFWTKYCRAEYL RTKN AVFLK D+IL N
Sbjct: 182 AVHRAFLNFVPSKMTEKDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDEILAN 241
Query: 1468 EARRKIKRVDPTVDMAADLGDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGT 1292
EAR KI+RVDPT+DM AD+GDDY+H+ D RDG ++ D ++E RR+LSQDLNRH
Sbjct: 242 EARHKIRRVDPTLDMEADIGDDYIHLPDHGILRDGSKETADAENEFARRTLSQDLNRHAA 301
Query: 1291 VVLEGRSLDDEFGDTKAVAEALAASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQN 1112
VVLEGR+LD E GDT+ AEALA S++ T+ +E N ER+E+VSR++EI+DL+AP +
Sbjct: 302 VVLEGRALDVELGDTRTAAEALARSKQELSTEISDEKTNQERMEKVSRMTEIEDLQAPCS 361
Query: 1111 LPFAPLSIKDPREYFDSQHANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--G 938
LPFAPL IKDPREYFDSQ ANA + LG+ G G+T L ++AY LLE + ++ G
Sbjct: 362 LPFAPLCIKDPREYFDSQQANAFKALGDTGGGITPVDCSLKTEEAYIYLLEQISEVKVRG 421
Query: 937 FSNPIVQPEEALKTLNWLNQHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELL 758
+ P+VQPE ALK LN LN +LSS K+H G NP E +LD LP +T++EL+ +WTSI ELL
Sbjct: 422 LNKPVVQPEAALKVLNGLNPYLSSTKYHLGKNPQECVLDRLPNRTKDELMHHWTSIQELL 481
Query: 757 QHFWSSFPITSEHLHDKVKRLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
+HFWSS+P+T+ +L++KV RL+ AM+ IY L+EIK SVQ+DFRHQVSLLVQPM Q
Sbjct: 482 RHFWSSYPVTTAYLYNKVLRLKDAMAQIYHKLQEIKESVQSDFRHQVSLLVQPMLQ 537
>XP_010644655.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Vitis vinifera]
Length = 576
Score = 651 bits (1679), Expect = 0.0
Identities = 342/571 (59%), Positives = 421/571 (73%), Gaps = 14/571 (2%)
Frame = -3
Query: 2257 VNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA-KQ 2081
V K A+YK SVK+ G+ GVL MTE +F F PND S+A+ DV+FR IKGHKFSK G+ K
Sbjct: 5 VLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKP 64
Query: 2080 ILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA---------LS 1928
LL++ D+ KG GYIFEF ++ DR VCR+FVG L +FS +G LS
Sbjct: 65 ALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQLS 124
Query: 1927 TTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTKQRTGFKSA 1748
T EMERR+KLL EDSEL+KLH QFV+ GVLTE EFWATRK LL+G+ S+ +KQR GFKSA
Sbjct: 125 TIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSA 184
Query: 1747 ILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDFWTKYCRAE 1568
+++D++PLTDGRTN+VTFNLTPEIIHQIFAEKPAVH+AFL FVPNKM+EKDFW KYCRAE
Sbjct: 185 MISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAE 244
Query: 1567 YLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADLGDDYLHIL 1388
YL T+N AVFLK DDIL NEARRKI+RVDPT+DM AD GDDY+H+
Sbjct: 245 YLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLP 304
Query: 1387 DEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAEALAASRK 1211
D FRDG + D E RR+LSQDLNRH VVLEGR +D E DT+ VAEALA S++
Sbjct: 305 DHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKR 364
Query: 1210 GRHTDSPEE-SENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQHANAVRTL 1034
+ + S ER+ER+SR++EI+DL+AP++LPFA L IKDPR+YFDSQ ANA++TL
Sbjct: 365 VEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTL 424
Query: 1033 GEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLNQHLSSNK 860
G+ +G Q LS ++AY SL + ++ G S+PIV+P+ ALK LN L Q++SS K
Sbjct: 425 GDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTK 484
Query: 859 FHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKRLRGAMS 680
FH G NP ES+LD LP T+EELL +WTSI ELL+HFWSS+PIT+ +L+ K RL+ AMS
Sbjct: 485 FHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMS 544
Query: 679 PIYKALEEIKSSVQTDFRHQVSLLVQPMHQV 587
IY L+EIK SVQ+DFRHQVSLLVQPM Q+
Sbjct: 545 QIYPKLQEIKESVQSDFRHQVSLLVQPMLQL 575
>XP_002276057.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X1 [Vitis vinifera] CBI39821.3 unnamed
protein product, partial [Vitis vinifera]
Length = 602
Score = 650 bits (1678), Expect = 0.0
Identities = 342/570 (60%), Positives = 420/570 (73%), Gaps = 14/570 (2%)
Frame = -3
Query: 2257 VNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA-KQ 2081
V K A+YK SVK+ G+ GVL MTE +F F PND S+A+ DV+FR IKGHKFSK G+ K
Sbjct: 5 VLKRARYKTSVKDSGVAGVLKMTEDKFVFMPNDPTSSARFDVEFRFIKGHKFSKGGSNKP 64
Query: 2080 ILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA---------LS 1928
LL++ D+ KG GYIFEF ++ DR VCR+FVG L +FS +G LS
Sbjct: 65 ALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAGSEQSAVKLFDEQLS 124
Query: 1927 TTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTKQRTGFKSA 1748
T EMERR+KLL EDSEL+KLH QFV+ GVLTE EFWATRK LL+G+ S+ +KQR GFKSA
Sbjct: 125 TIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGNTSRTSKQRVGFKSA 184
Query: 1747 ILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDFWTKYCRAE 1568
+++D++PLTDGRTN+VTFNLTPEIIHQIFAEKPAVH+AFL FVPNKM+EKDFW KYCRAE
Sbjct: 185 MISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNKMTEKDFWNKYCRAE 244
Query: 1567 YLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADLGDDYLHIL 1388
YL T+N AVFLK DDIL NEARRKI+RVDPT+DM AD GDDY+H+
Sbjct: 245 YLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLP 304
Query: 1387 DEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAEALAASRK 1211
D FRDG + D E RR+LSQDLNRH VVLEGR +D E DT+ VAEALA S++
Sbjct: 305 DHGIFRDGSKEIIDPQYEQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKR 364
Query: 1210 GRHTDSPEE-SENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQHANAVRTL 1034
+ + S ER+ER+SR++EI+DL+AP++LPFA L IKDPR+YFDSQ ANA++TL
Sbjct: 365 VEAANEKSDGSVTRERLERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTL 424
Query: 1033 GEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWLNQHLSSNK 860
G+ +G Q LS ++AY SL + ++ G S+PIV+P+ ALK LN L Q++SS K
Sbjct: 425 GDTLAGSKQIKCSLSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTK 484
Query: 859 FHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKRLRGAMS 680
FH G NP ES+LD LP T+EELL +WTSI ELL+HFWSS+PIT+ +L+ K RL+ AMS
Sbjct: 485 FHLGKNPQESVLDRLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMS 544
Query: 679 PIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
IY L+EIK SVQ+DFRHQVSLLVQPM Q
Sbjct: 545 QIYPKLQEIKESVQSDFRHQVSLLVQPMLQ 574
>JAT49604.1 putative RNA polymerase II transcription factor B subunit 1-1
[Anthurium amnicola]
Length = 555
Score = 633 bits (1633), Expect = 0.0
Identities = 322/553 (58%), Positives = 414/553 (74%), Gaps = 17/553 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSKEGA 2087
MAVV A KYKP+VKEPGIPG+L MTE RFTFTP+D+RS+ KLDV F IK H+F+KEG
Sbjct: 1 MAVVVMATKYKPAVKEPGIPGMLRMTEDRFTFTPSDKRSSTKLDVSFSKIKAHRFTKEGT 60
Query: 2086 KQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHTA--------- 1934
KQ LL+I+HD+ KG GYIFEF+ F DRNVCRDFVG +LG+F T P G TA
Sbjct: 61 KQALLNILHDSEKGGGYIFEFDSFPDRNVCRDFVGKVLGKFQTPSP-GQTAQAVSESSTP 119
Query: 1933 -----LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRTKQ 1769
LS TE+ERRMKLL +DSEL+KLH QFV+ GVLTE EFWATRKN+L+ D + +KQ
Sbjct: 120 VHGEQLSATELERRMKLLRDDSELQKLHRQFVMSGVLTEAEFWATRKNMLDIDTCRTSKQ 179
Query: 1768 RTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKDFW 1589
RTGFKSAILADVRPLTDG++NKVTF+LT EIIHQIFAEKPAV +AFL FVP+KM+E DFW
Sbjct: 180 RTGFKSAILADVRPLTDGQSNKVTFSLTWEIIHQIFAEKPAVRQAFLNFVPSKMTENDFW 239
Query: 1588 TKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAADLG 1409
KY +A++L RTKN AVFLK+DDI+ E+RRKI+RVDPT+DMAAD+G
Sbjct: 240 KKYFKADFLYRTKNTFAAAAEAAEDEELAVFLKQDDIVAAESRRKIRRVDPTLDMAADIG 299
Query: 1408 DDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAVAE 1232
DDY+H++D RDG ++ D D+EL +R++ QDLNRH VVLEGR LD E DT+AVAE
Sbjct: 300 DDYMHVMDHGILRDGNKETTDVDNELPQRTILQDLNRHAAVVLEGRVLDAELADTRAVAE 359
Query: 1231 ALAASRKGR-HTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQH 1055
ALA S++ + +ES NL+R++RV +++EI+DL+ +NLPF PL IKDPREYFDSQH
Sbjct: 360 ALARSKQVELSNEGSDESANLDRLKRVHQMTEIEDLQGSRNLPFTPLCIKDPREYFDSQH 419
Query: 1054 ANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE-GFSNPIVQPEEALKTLNWLNQ 878
ANA++ L E G+ L+ K+AYD L + + ++ G +P++QPE A + L+ LN+
Sbjct: 420 ANALKALLETGASTKFVNWSLNGKEAYDYLFDQISEVKVGLRDPVIQPEAAFEVLSGLNR 479
Query: 877 HLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKVKR 698
H+SS K+ G +P ES+L LP +T++++L +W SI ELL+HFWSS+PIT+ +L++KV R
Sbjct: 480 HVSSTKYDIGKDPHESVLGRLPNRTKDDILEHWASIQELLRHFWSSYPITTAYLYNKVTR 539
Query: 697 LRGAMSPIYKALE 659
L+ AM+ IY LE
Sbjct: 540 LKDAMTQIYHKLE 552
>XP_019051904.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 [Nelumbo nucifera]
Length = 638
Score = 622 bits (1603), Expect = 0.0
Identities = 325/528 (61%), Positives = 397/528 (75%), Gaps = 19/528 (3%)
Frame = -3
Query: 2116 KGHKFSKEGAKQILLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRFSTVQPSGHT 1937
+GHKF+KEG+KQ LL++ D G GYIFEF+ F+DR+VCRDFVG +LG+ ++ SG
Sbjct: 84 EGHKFTKEGSKQALLNLTQDPEMGGGYIFEFDKFSDRDVCRDFVGKVLGKIQSMVSSGQD 143
Query: 1936 A---------------LSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNL 1802
A LST EME RMKLL EDSEL+KLH QFVI GVLTE EFWATRK L
Sbjct: 144 ARAVSERSAVAVHDEQLSTREMEHRMKLLREDSELQKLHKQFVIAGVLTESEFWATRKKL 203
Query: 1801 LEGDASKRTKQRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRF 1622
L+ DA + +KQR GFKSA+LADVRPLTDGRTNKVTF+LTPEIIHQIFAEKPAVH+AFL F
Sbjct: 204 LDTDA-RTSKQRVGFKSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLNF 262
Query: 1621 VPNKMSEKDFWTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRV 1442
VPNKM+EKDFWTKYCRAEYL RTKN A+FLK DDIL +EARRKI+RV
Sbjct: 263 VPNKMTEKDFWTKYCRAEYLHRTKNSIAAAAEAAEDEELAIFLKHDDILASEARRKIRRV 322
Query: 1441 DPTVDMAADLGDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLD 1265
DPT+DM AD GDDY+H+ D FRDG + D + EL +R+LSQDLNRH VVLEGR+LD
Sbjct: 323 DPTLDMEADQGDDYMHLPDHGIFRDGNKEVMDSEYELYKRTLSQDLNRHAAVVLEGRALD 382
Query: 1264 DEFGDTKAVAEALAASRKGR-HTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSI 1088
E GDT+ VAEALA S++ T+S +E N +R+ER+S+++ I+DL++ + LPFAPL I
Sbjct: 383 LELGDTRTVAEALARSKQVELATESSDEKANEKRLERLSQMAGIEDLQSSRGLPFAPLCI 442
Query: 1087 KDPREYFDSQHANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQP 914
KDPREYFDSQ ANA++ LG+ GM LS ++AY SL + + ++ G ++P+V+P
Sbjct: 443 KDPREYFDSQQANALQALGDTIGGMKPINYSLSTEEAYGSLRDLISEMKATGLNHPVVKP 502
Query: 913 EEALKTLNWLNQHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFP 734
+ ALK LN L QHLSS K H G NP ES+LD LP+KT+EELL +WTSI ELL+HFWSS+P
Sbjct: 503 DVALKVLNALTQHLSSTKHHVGKNPQESVLDRLPRKTKEELLHHWTSIQELLKHFWSSYP 562
Query: 733 ITSEHLHDKVKRLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
IT+ HL+ KV RL+ AMS IY L+EIK S+Q+DFRHQVSLLVQPM Q
Sbjct: 563 ITTTHLYSKVTRLKDAMSQIYPKLQEIKESMQSDFRHQVSLLVQPMLQ 610
>XP_015650975.1 PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1 isoform X2 [Oryza sativa Japonica Group] BAD03200.1
unknown protein [Oryza sativa Japonica Group] BAF23497.1
Os08g0338200 [Oryza sativa Japonica Group] BAG90767.1
unnamed protein product [Oryza sativa Japonica Group]
BAT04988.1 Os08g0338200 [Oryza sativa Japonica Group]
Length = 604
Score = 607 bits (1566), Expect = 0.0
Identities = 320/578 (55%), Positives = 414/578 (71%), Gaps = 19/578 (3%)
Frame = -3
Query: 2266 MAVVNKAAKYKPSVKEPGIPGVLVMTEKRFTFTPNDQRSNAKLDVDFRTIKGHKFSK-EG 2090
M + AKYK ++K+PG GVL M E +FTFTP+D RS KL+VDFR+IKGHKF+K +G
Sbjct: 1 MGSMTIGAKYKTTLKDPGTTGVLRMNEDKFTFTPHDPRSAMKLNVDFRSIKGHKFNKVDG 60
Query: 2089 AKQI--LLSIVHDNPKGSGYIFEFNDFADRNVCRDFVGNILGRF-------------STV 1955
+K LL++ D+ KG GY+FEF++ +R++ RDFV +LG+ ++V
Sbjct: 61 SKPAPPLLNLSKDSDKGGGYMFEFDNVTNRDLSRDFVAKVLGKQQGTIPPKPNVPPENSV 120
Query: 1954 QPSGHTALSTTEMERRMKLLGEDSELKKLHMQFVIKGVLTEDEFWATRKNLLEGDASKRT 1775
+G LS EM+RRMKLL EDSEL+KLHM+FV+ +L E EFWATRKNLLE +A+K +
Sbjct: 121 TSTGEEQLSAAEMQRRMKLLQEDSELQKLHMKFVLGNILQESEFWATRKNLLEDEANKGS 180
Query: 1774 KQRTGFKSAILADVRPLTDGRTNKVTFNLTPEIIHQIFAEKPAVHRAFLRFVPNKMSEKD 1595
KQR GFKSA+LADVRP DGRTNKVTF+LT EIIHQIFAEKPAVHRAFL FVP KMSEKD
Sbjct: 181 KQRPGFKSAMLADVRPSADGRTNKVTFSLTTEIIHQIFAEKPAVHRAFLDFVPKKMSEKD 240
Query: 1594 FWTKYCRAEYLLRTKNDGXXXXXXXXXXXXAVFLKRDDILVNEARRKIKRVDPTVDMAAD 1415
FWTKY RAEYLLRTKN A+FLK DDIL EAR KIKRVDPT+DM AD
Sbjct: 241 FWTKYFRAEYLLRTKNTVAATAEAAEDEELAIFLKNDDILAKEARLKIKRVDPTLDMEAD 300
Query: 1414 LGDDYLHILDEN-FRDGKNDSNDFDSELTRRSLSQDLNRHGTVVLEGRSLDDEFGDTKAV 1238
GDDY+H+ D RDG ++ D D EL RR+LSQDLNRH VVLEGRS D E DTK V
Sbjct: 301 AGDDYIHLPDHGIIRDGSKETIDNDGELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTV 360
Query: 1237 AEALAASRKGRHTDSPEESENLERIERVSRLSEIDDLRAPQNLPFAPLSIKDPREYFDSQ 1058
AEA+A S+K + S + N ER+ +V+R++EI+DL+AP++LP+APL IKDPREYFDSQ
Sbjct: 361 AEAIARSKKEPPSSSISDDTNHERLVKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQ 420
Query: 1057 HANAVRTLGEAGSGMTQHIQMLSAKQAYDSLLENLHALE--GFSNPIVQPEEALKTLNWL 884
ANA+R+LG G LS A+D LL + +++ G + P++Q + ALK LN L
Sbjct: 421 QANALRSLGGNNDGRHARNCRLSTDDAFDHLLGQISSIKVNGLNYPVIQSDVALKVLNEL 480
Query: 883 NQHLSSNKFHRGTNPSESILDNLPKKTREELLLYWTSIHELLQHFWSSFPITSEHLHDKV 704
N+ +S ++ NP +S+L +P++TR+EL+ +W +I ELLQHFWSS+PIT+ L++KV
Sbjct: 481 NEGISRSRRLNLKNPQDSLLGQIPRRTRDELMDHWAAIQELLQHFWSSYPITTSVLYNKV 540
Query: 703 KRLRGAMSPIYKALEEIKSSVQTDFRHQVSLLVQPMHQ 590
+R++ AM+ IY+ L++IK S Q D RH++S LV+PM Q
Sbjct: 541 QRIKDAMTQIYQKLQDIKESAQPDVRHEISQLVKPMTQ 578