BLASTX nr result

ID: Alisma22_contig00005988 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00005988
         (1211 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

JAT58239.1 HTH-type transcriptional repressor YcgE [Anthurium am...    63   4e-08
JAT50410.1 ERAD-associated E3 ubiquitin-protein ligase component...    56   5e-06

>JAT58239.1 HTH-type transcriptional repressor YcgE [Anthurium amnicola]
          Length = 170

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 54/178 (30%), Positives = 65/178 (36%), Gaps = 5/178 (2%)
 Frame = -1

Query: 890 PASLLKHNTWSPDSLREETWQXXXXXXXXXXXDGS-----RMCRSVTEEDLEELRGCIXX 726
           PA L K  +WSPDS REE WQ           + +     R+ +SVT+EDL+ELRGCI  
Sbjct: 16  PAPLYKQRSWSPDSDREEAWQRRKGLYKSRRKEAAGGRLHRLSKSVTDEDLDELRGCI-- 73

Query: 725 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKLWELLPALDLYYAVKRSSRQIX 546
                                                +L + LPALDLYYAV RS     
Sbjct: 74  --------------DLGFRFGLDSPVSTATASSDDADRLSDTLPALDLYYAVNRS----- 114

Query: 545 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPREVKARLKQWAQVVAC 372
                                                    P++VK RLKQWAQVVAC
Sbjct: 115 ---------YSGPVAAGAKCEPSSGVSPAGSPLSIYSPGDSPQQVKRRLKQWAQVVAC 163


>JAT50410.1 ERAD-associated E3 ubiquitin-protein ligase component HRD3, partial
           [Anthurium amnicola]
          Length = 147

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 50/168 (29%), Positives = 57/168 (33%)
 Frame = -1

Query: 881 LLKHNTWSPDSLREETWQXXXXXXXXXXXDGSRMCRSVTEEDLEELRGCIXXXXXXXXXX 702
           L K  +WSPD  REE W               R+ RSVTEEDLEELRGCI          
Sbjct: 15  LYKQRSWSPDIDREEAWLRRRDLYRSRRGCHHRLSRSVTEEDLEELRGCI---------- 64

Query: 701 XXXXXXXXXXXXXXXXXXXXXXXXXXXNKKLWELLPALDLYYAVKRSSRQIXXXXXXXXX 522
                                        +L + LPALDLYYAV R+             
Sbjct: 65  ----ELGFGFGVGVGSPASFTTESSDDADRLSDTLPALDLYYAVHRNCSS---------- 110

Query: 521 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPREVKARLKQWAQVV 378
                                            PR+VK +LKQWAQVV
Sbjct: 111 -----------DAPAAGPSPAGSPPSIYSPGESPRQVKMKLKQWAQVV 147


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