BLASTX nr result
ID: Alisma22_contig00005988
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Alisma22_contig00005988 (1211 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value JAT58239.1 HTH-type transcriptional repressor YcgE [Anthurium am... 63 4e-08 JAT50410.1 ERAD-associated E3 ubiquitin-protein ligase component... 56 5e-06 >JAT58239.1 HTH-type transcriptional repressor YcgE [Anthurium amnicola] Length = 170 Score = 62.8 bits (151), Expect = 4e-08 Identities = 54/178 (30%), Positives = 65/178 (36%), Gaps = 5/178 (2%) Frame = -1 Query: 890 PASLLKHNTWSPDSLREETWQXXXXXXXXXXXDGS-----RMCRSVTEEDLEELRGCIXX 726 PA L K +WSPDS REE WQ + + R+ +SVT+EDL+ELRGCI Sbjct: 16 PAPLYKQRSWSPDSDREEAWQRRKGLYKSRRKEAAGGRLHRLSKSVTDEDLDELRGCI-- 73 Query: 725 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKKLWELLPALDLYYAVKRSSRQIX 546 +L + LPALDLYYAV RS Sbjct: 74 --------------DLGFRFGLDSPVSTATASSDDADRLSDTLPALDLYYAVNRS----- 114 Query: 545 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPREVKARLKQWAQVVAC 372 P++VK RLKQWAQVVAC Sbjct: 115 ---------YSGPVAAGAKCEPSSGVSPAGSPLSIYSPGDSPQQVKRRLKQWAQVVAC 163 >JAT50410.1 ERAD-associated E3 ubiquitin-protein ligase component HRD3, partial [Anthurium amnicola] Length = 147 Score = 56.2 bits (134), Expect = 5e-06 Identities = 50/168 (29%), Positives = 57/168 (33%) Frame = -1 Query: 881 LLKHNTWSPDSLREETWQXXXXXXXXXXXDGSRMCRSVTEEDLEELRGCIXXXXXXXXXX 702 L K +WSPD REE W R+ RSVTEEDLEELRGCI Sbjct: 15 LYKQRSWSPDIDREEAWLRRRDLYRSRRGCHHRLSRSVTEEDLEELRGCI---------- 64 Query: 701 XXXXXXXXXXXXXXXXXXXXXXXXXXXNKKLWELLPALDLYYAVKRSSRQIXXXXXXXXX 522 +L + LPALDLYYAV R+ Sbjct: 65 ----ELGFGFGVGVGSPASFTTESSDDADRLSDTLPALDLYYAVHRNCSS---------- 110 Query: 521 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPREVKARLKQWAQVV 378 PR+VK +LKQWAQVV Sbjct: 111 -----------DAPAAGPSPAGSPPSIYSPGESPRQVKMKLKQWAQVV 147