BLASTX nr result
ID: Alisma22_contig00005828
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00005828
(1263 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010924257.1 PREDICTED: putative exosome complex component rrp... 352 e-118
XP_002282635.1 PREDICTED: putative exosome complex component rrp... 350 e-117
XP_008806895.1 PREDICTED: putative exosome complex component rrp... 347 e-116
XP_010251261.1 PREDICTED: putative exosome complex component rrp... 345 e-115
JAT53480.1 Putative exosome complex component rrp40 [Anthurium a... 344 e-114
XP_020106314.1 putative exosome complex component rrp40 isoform ... 342 e-114
XP_016721111.1 PREDICTED: putative exosome complex component rrp... 342 e-114
XP_016666803.1 PREDICTED: putative exosome complex component rrp... 342 e-114
OAY75957.1 putative exosome complex component rrp40 [Ananas como... 342 e-114
XP_003518749.1 PREDICTED: putative exosome complex component rrp... 342 e-114
XP_006827742.1 PREDICTED: putative exosome complex component rrp... 342 e-114
XP_012080072.1 PREDICTED: putative exosome complex component rrp... 342 e-114
XP_007036203.1 PREDICTED: putative exosome complex component rrp... 341 e-113
XP_009402530.1 PREDICTED: putative exosome complex component rrp... 341 e-113
ONK81783.1 uncharacterized protein A4U43_C01F32830 [Asparagus of... 341 e-113
XP_012478610.1 PREDICTED: putative exosome complex component rrp... 340 e-113
XP_014492890.1 PREDICTED: putative exosome complex component rrp... 339 e-113
XP_002318044.1 exonuclease-related family protein [Populus trich... 339 e-113
XP_011044305.1 PREDICTED: putative exosome complex component rrp... 339 e-112
OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Cor... 337 e-112
>XP_010924257.1 PREDICTED: putative exosome complex component rrp40 [Elaeis
guineensis]
Length = 242
Score = 352 bits (903), Expect = e-118
Identities = 173/242 (71%), Positives = 198/242 (81%), Gaps = 1/242 (0%)
Frame = -3
Query: 1033 MEVE-PGNPPLKANVDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFL 857
M+VE P NPPL + +D+ V+PGD VLDL M QTIKLG GLRQDCDTI+ KAG+L
Sbjct: 1 MDVEKPSNPPLTSCIDRIVLPGDTVLDLSTMANQTIKLGEGLRQDCDTISVMKAGKLRLS 60
Query: 856 KPNKYWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIP 677
KPNKYWVESS KRY PC EDTI+GIVVDS+ DNF+VDIK P LA LPVLAFEGGTRRNIP
Sbjct: 61 KPNKYWVESSHKRYVPCAEDTILGIVVDSKPDNFLVDIKGPTLALLPVLAFEGGTRRNIP 120
Query: 676 KFEMGTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTC 497
KFE+GTL+Y RVVKAN+ M+PELSCTD+ GKA+EFGPLK GYMF+ TC
Sbjct: 121 KFEVGTLLYVRVVKANNSMNPELSCTDATGKAAEFGPLKDGYMFETSTGLARMLLGSPTC 180
Query: 496 PVLDALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQR 317
P+L+ALGKKLSFEIA+GLNGRVWVNASSP T+++VSNAIM SE LSG QQ+IMVEKLMQ+
Sbjct: 181 PILEALGKKLSFEIAIGLNGRVWVNASSPATIIVVSNAIMNSEFLSGTQQRIMVEKLMQK 240
Query: 316 LQ 311
LQ
Sbjct: 241 LQ 242
>XP_002282635.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Vitis vinifera] CBI15022.3 unnamed protein product,
partial [Vitis vinifera]
Length = 237
Score = 350 bits (898), Expect = e-117
Identities = 174/228 (76%), Positives = 192/228 (84%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
VDQ VVPGDVVLDL M QTIKLG GL QDCD IT TKAGRL F KPNKYWVESSQKRY
Sbjct: 10 VDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVESSQKRY 69
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC EDT++GIVVDS++DNF+VDIK PALA LPVLAFEGGTRRNIPKFE GTL+Y RVVK
Sbjct: 70 VPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVK 129
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN+GM+PELSCTD+ GKA+EFGPLK GYMF+ TCPVL+ALGKKLSFEI
Sbjct: 130 ANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGKKLSFEI 189
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNASSP TV++V+NAIM SESLS QQKIMV+KL+QR+Q
Sbjct: 190 AVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRIQ 237
>XP_008806895.1 PREDICTED: putative exosome complex component rrp40 [Phoenix
dactylifera]
Length = 242
Score = 347 bits (891), Expect = e-116
Identities = 175/242 (72%), Positives = 197/242 (81%), Gaps = 1/242 (0%)
Frame = -3
Query: 1033 MEVE-PGNPPLKANVDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFL 857
M+VE P +PPL + VDQ VVPGD VLDL M+ QTIKLG GLRQD D I+ KAG+L
Sbjct: 1 MKVEQPSDPPLNSCVDQLVVPGDTVLDLSTMSNQTIKLGEGLRQDSDKISVMKAGKLRLS 60
Query: 856 KPNKYWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIP 677
KPNKYWVESS KRY PC EDTI+GIVVDS+ DNF+VDIK P LA LPVLAFEGGTRRNIP
Sbjct: 61 KPNKYWVESSHKRYVPCVEDTILGIVVDSKPDNFLVDIKGPTLAFLPVLAFEGGTRRNIP 120
Query: 676 KFEMGTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTC 497
KFE+GTL+Y RVVKAN+ M+PELSCTD+ GKA+EFGPLK GYMF+ TC
Sbjct: 121 KFEVGTLLYVRVVKANNSMNPELSCTDASGKAAEFGPLKDGYMFETSTGLARMLLSSPTC 180
Query: 496 PVLDALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQR 317
PVL+ALGKKLSFEIA+GLNGRVWVNASSP T VI+SNAIM+SE LSG QQ+IMVEKLMQ+
Sbjct: 181 PVLEALGKKLSFEIAIGLNGRVWVNASSPATTVILSNAIMKSEFLSGTQQRIMVEKLMQK 240
Query: 316 LQ 311
LQ
Sbjct: 241 LQ 242
>XP_010251261.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Nelumbo nucifera]
Length = 243
Score = 345 bits (884), Expect = e-115
Identities = 169/228 (74%), Positives = 192/228 (84%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
+DQ VVPGDVVLDL +M+ QTIKLG GLRQDCDTI+ KAG+L F KPNKYWVESSQKRY
Sbjct: 13 IDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGKLKFSKPNKYWVESSQKRY 72
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC EDTI+G VVDS++DNF+VDIK P LA LPVLAFEGGTRRNIPK+E GTL+Y RVVK
Sbjct: 73 VPCVEDTILGTVVDSKADNFLVDIKGPTLAFLPVLAFEGGTRRNIPKYEAGTLLYVRVVK 132
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN+GM+PELSCTD+ GKA+EFG LK GYMF+ TCPVL+ALGKKLSFEI
Sbjct: 133 ANAGMNPELSCTDASGKAAEFGVLKDGYMFETSTGLSRMLLSSPTCPVLEALGKKLSFEI 192
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
A+GLNGRVWVNA+SP TV++VSNAIM SESLSG QQ+IMVEKLMQ+ Q
Sbjct: 193 AIGLNGRVWVNAASPSTVILVSNAIMNSESLSGVQQRIMVEKLMQKFQ 240
>JAT53480.1 Putative exosome complex component rrp40 [Anthurium amnicola]
Length = 253
Score = 344 bits (882), Expect = e-114
Identities = 171/237 (72%), Positives = 191/237 (80%)
Frame = -3
Query: 1030 EVEPGNPPLKANVDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKP 851
E PP A VD+ VVPGD+VLDL MT QT+KLG GLRQD DTIT KAGRL F KP
Sbjct: 11 EAPSSAPPTIALVDKIVVPGDIVLDLSKMTNQTVKLGSGLRQDGDTITVMKAGRLRFSKP 70
Query: 850 NKYWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKF 671
NKYWVESS KRY PC ED ++GIV D + DNF+VDIK P LASLPVLAFEGGTRRNIPKF
Sbjct: 71 NKYWVESSHKRYIPCVEDKVLGIVADCKPDNFLVDIKGPTLASLPVLAFEGGTRRNIPKF 130
Query: 670 EMGTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPV 491
E+GTL+Y RVVKANSGM+PELSCTD+ GKA+EFGPLK GYMF+ TCPV
Sbjct: 131 EIGTLLYVRVVKANSGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLCRMLLGSPTCPV 190
Query: 490 LDALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQ 320
L+ALGKKLSFEIAVGLNGRVWVNASSP+T++ V+NAIM SESLSG QQ+IMV+KLMQ
Sbjct: 191 LEALGKKLSFEIAVGLNGRVWVNASSPKTIIAVTNAIMNSESLSGVQQRIMVDKLMQ 247
>XP_020106314.1 putative exosome complex component rrp40 isoform X1 [Ananas
comosus]
Length = 235
Score = 342 bits (878), Expect = e-114
Identities = 170/228 (74%), Positives = 189/228 (82%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
VD+ VVPGDVVLDL M QTIKLG GLRQDCDTI+A KAG+L KPNKYW+ESSQKRY
Sbjct: 8 VDKPVVPGDVVLDLSTMANQTIKLGAGLRQDCDTISAMKAGKLRLSKPNKYWIESSQKRY 67
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC EDT++GIVVD++ DNF+VDIK P LA LPVLAFEGGTRRNIPKFE+GTLIY+RVVK
Sbjct: 68 VPCVEDTVLGIVVDTKPDNFLVDIKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYARVVK 127
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
ANS M+PELSCTD+ GKA+EFGPLK GYMF+ CPVL+ALGKKLSFE
Sbjct: 128 ANSIMNPELSCTDAGGKAAEFGPLKDGYMFETSTGLARMLLSSPMCPVLEALGKKLSFET 187
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNASSP V++VSNAIMRSE LSG QQ+IMVEKLM RLQ
Sbjct: 188 AVGLNGRVWVNASSPSNVILVSNAIMRSEFLSGTQQRIMVEKLMDRLQ 235
>XP_016721111.1 PREDICTED: putative exosome complex component rrp40 [Gossypium
hirsutum]
Length = 240
Score = 342 bits (878), Expect = e-114
Identities = 166/228 (72%), Positives = 191/228 (83%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
VD VVPGDVVLDL +MT QTIKLG GLRQDCD I+ATKAG L F KPNKYW+ESSQKRY
Sbjct: 13 VDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISATKAGTLRFSKPNKYWIESSQKRY 72
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC EDTI+GIVVDS++DNF++DIK PA+ LPVLAFEGGTRRNIPKFE+GTL+Y RVVK
Sbjct: 73 VPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVGTLLYLRVVK 132
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN GM+PELSCTD+ GKA+EFGPLK GYMF+ CPVL+ALGKKLSFEI
Sbjct: 133 ANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLLRKLLSSPACPVLEALGKKLSFEI 192
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNA+SP+T+V+V+NAIM SE LSGAQQ IMV+ L++ +Q
Sbjct: 193 AVGLNGRVWVNAASPDTIVVVANAIMNSECLSGAQQIIMVDHLLKNIQ 240
>XP_016666803.1 PREDICTED: putative exosome complex component rrp40 isoform X2
[Gossypium hirsutum] XP_017635430.1 PREDICTED: putative
exosome complex component rrp40 isoform X2 [Gossypium
arboreum]
Length = 240
Score = 342 bits (878), Expect = e-114
Identities = 167/228 (73%), Positives = 193/228 (84%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
VD VVPGDVVLDL +MT+QTIKLG GLRQDCD I+A KAG L F KPNKYW+ESSQKRY
Sbjct: 13 VDSTVVPGDVVLDLSSMTSQTIKLGGGLRQDCDAISAMKAGTLRFSKPNKYWIESSQKRY 72
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC EDTI+GIVVDS++DNF++DIK PA+ LPVLAFEGGTRRNIPKFE+GTL+Y RVVK
Sbjct: 73 VPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVGTLLYLRVVK 132
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN GM+PELSCTD+ GKA+EFGPLK GYMF+ TCPVL+ALGKKLSFEI
Sbjct: 133 ANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPVLEALGKKLSFEI 192
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNA+SP+T+V+V+NAIM SESLSGAQQ IMV+ L++ +Q
Sbjct: 193 AVGLNGRVWVNAASPDTIVVVANAIMNSESLSGAQQIIMVDHLLKNIQ 240
>OAY75957.1 putative exosome complex component rrp40 [Ananas comosus]
Length = 235
Score = 342 bits (877), Expect = e-114
Identities = 169/228 (74%), Positives = 189/228 (82%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
VD+ VVPGDVVLDL M QTIKLG GLRQDCDTI+A KAG+L KPNKYW+ESSQKRY
Sbjct: 8 VDKPVVPGDVVLDLSTMANQTIKLGAGLRQDCDTISAMKAGKLRLSKPNKYWIESSQKRY 67
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC EDT++GIVVD++ DNF+VD+K P LA LPVLAFEGGTRRNIPKFE+GTLIY+RVVK
Sbjct: 68 VPCVEDTVLGIVVDTKPDNFLVDVKGPNLAFLPVLAFEGGTRRNIPKFEIGTLIYARVVK 127
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
ANS M+PELSCTD+ GKA+EFGPLK GYMF+ CPVL+ALGKKLSFE
Sbjct: 128 ANSIMNPELSCTDAGGKAAEFGPLKDGYMFETSTGLARMLLSSPMCPVLEALGKKLSFET 187
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNASSP V++VSNAIMRSE LSG QQ+IMVEKLM RLQ
Sbjct: 188 AVGLNGRVWVNASSPSNVILVSNAIMRSEFLSGTQQRIMVEKLMDRLQ 235
>XP_003518749.1 PREDICTED: putative exosome complex component rrp40 [Glycine max]
XP_006574927.1 PREDICTED: putative exosome complex
component rrp40 [Glycine max] KHN01995.1 Putative
exosome complex component rrp40 [Glycine soja]
KRH70818.1 hypothetical protein GLYMA_02G112000 [Glycine
max] KRH70819.1 hypothetical protein GLYMA_02G112000
[Glycine max]
Length = 240
Score = 342 bits (877), Expect = e-114
Identities = 167/227 (73%), Positives = 194/227 (85%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
VDQ+V PGDV+LDL NMT QTIKLG GLRQDCD I+ KAGRL F KPNKYWVE+SQKRY
Sbjct: 13 VDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKPNKYWVENSQKRY 72
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
P ED+++GIVVDSRSDNF+VDIK PALA LPVLAFEGGTRRNIP+FE+GTLIY+RVVK
Sbjct: 73 VPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRFEIGTLIYARVVK 132
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN GM+PEL+CTD+ GKA+EFG LK GYMF+ TCPVLDALGKKLSFEI
Sbjct: 133 ANPGMNPELACTDASGKAAEFGALKDGYMFECTTGLSRMLLSSPTCPVLDALGKKLSFEI 192
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRL 314
AVGLNGRVWV+A+SP+T ++V+NAIM SE+LSGAQQ+IMVEKL++R+
Sbjct: 193 AVGLNGRVWVSAASPQTTIVVANAIMNSETLSGAQQRIMVEKLLERI 239
>XP_006827742.1 PREDICTED: putative exosome complex component rrp40 [Amborella
trichopoda] XP_011625387.1 PREDICTED: putative exosome
complex component rrp40 [Amborella trichopoda]
ERM95158.1 hypothetical protein AMTR_s00009p00262150
[Amborella trichopoda]
Length = 240
Score = 342 bits (876), Expect = e-114
Identities = 166/228 (72%), Positives = 190/228 (83%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
VD V PGDVVLDL NM QT+KLG GLRQ+CD I TKAGR F KPNKYWVESSQKRY
Sbjct: 13 VDHWVAPGDVVLDLTNMANQTLKLGGGLRQECDAIIVTKAGRFKFSKPNKYWVESSQKRY 72
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC EDT++GIVVDS++DNF+VDIK P L LPVLAFEGGTRRN+PKFE+GT++Y RVVK
Sbjct: 73 VPCVEDTVLGIVVDSKADNFLVDIKGPTLGFLPVLAFEGGTRRNVPKFEIGTVLYLRVVK 132
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN+GM+PELSCTD+ GKASEFGP+K GYMF+ TCPVLDALGKKLSFEI
Sbjct: 133 ANTGMNPELSCTDATGKASEFGPIKDGYMFESSTGLARLLLSRPTCPVLDALGKKLSFEI 192
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNASSP TV++V+NAIM +E LSGAQQ+I+VEKL+QR+Q
Sbjct: 193 AVGLNGRVWVNASSPSTVILVANAIMSAEFLSGAQQRILVEKLLQRVQ 240
>XP_012080072.1 PREDICTED: putative exosome complex component rrp40 [Jatropha curcas]
KDP31104.1 hypothetical protein JCGZ_11480 [Jatropha
curcas]
Length = 241
Score = 342 bits (876), Expect = e-114
Identities = 168/241 (69%), Positives = 197/241 (81%)
Frame = -3
Query: 1033 MEVEPGNPPLKANVDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLK 854
ME +P + P VD+ VVPGDVV+DL M+ QTIKLG GLRQDCD I+ TK+G+L F K
Sbjct: 1 MEAKPSSSPTSL-VDKLVVPGDVVIDLSTMSNQTIKLGGGLRQDCDAISVTKSGKLRFSK 59
Query: 853 PNKYWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPK 674
PNKYWVE SQKRY PC ED+++GIVVDS+++NF+VDIK P LA LPVLAFEGGTRRNIPK
Sbjct: 60 PNKYWVEGSQKRYVPCAEDSVLGIVVDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPK 119
Query: 673 FEMGTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCP 494
FE+GTL+Y RVVKAN GM+PELSCTD+ GKA+EFG LK GYMF+ TCP
Sbjct: 120 FEVGTLLYVRVVKANPGMNPELSCTDASGKAAEFGVLKDGYMFECSTGLSRMLLSSPTCP 179
Query: 493 VLDALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRL 314
VL+ALG KLSFEIAVGLNGRVWVNA+SP TV+IV+NAIM SE+LSG QQKIMVEKL+Q++
Sbjct: 180 VLEALGNKLSFEIAVGLNGRVWVNATSPSTVIIVANAIMNSETLSGVQQKIMVEKLLQKI 239
Query: 313 Q 311
Q
Sbjct: 240 Q 240
>XP_007036203.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Theobroma cacao] EOY20704.1 PNAS-3 related isoform 1
[Theobroma cacao]
Length = 240
Score = 341 bits (875), Expect = e-113
Identities = 168/238 (70%), Positives = 196/238 (82%)
Frame = -3
Query: 1024 EPGNPPLKANVDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNK 845
+ G+PP + +D VVPGDVVLDL +MT QTI LG GLRQDCD I+ KAG L F KPNK
Sbjct: 5 QSGSPP--SLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCDAISVMKAGTLRFSKPNK 62
Query: 844 YWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEM 665
YWVESSQKRY PC EDT++GIVVDS++DNF++DIK P LA LPVLAFEGGTRRNIPKFE+
Sbjct: 63 YWVESSQKRYTPCVEDTVLGIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKFEV 122
Query: 664 GTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLD 485
GTL+Y RVVKAN GM+PELSCTD+ GKA+EFGPLK GYMF+ TCPVL+
Sbjct: 123 GTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPVLE 182
Query: 484 ALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
ALGKKLSFEIAVGLNGRVWVNA++P+T+V+V+NAIM SESLSGAQQ IMVE L++ +Q
Sbjct: 183 ALGKKLSFEIAVGLNGRVWVNAATPDTIVVVANAIMNSESLSGAQQIIMVEHLLKNIQ 240
>XP_009402530.1 PREDICTED: putative exosome complex component rrp40 [Musa acuminata
subsp. malaccensis]
Length = 241
Score = 341 bits (875), Expect = e-113
Identities = 172/241 (71%), Positives = 191/241 (79%)
Frame = -3
Query: 1033 MEVEPGNPPLKANVDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLK 854
M E + P + VD+ VVPGD VLDL M QTIKLG GLRQDCDTI+ KAG+L K
Sbjct: 1 MNAETSDAPPTSLVDRTVVPGDTVLDLTAMANQTIKLGAGLRQDCDTISVMKAGKLRLSK 60
Query: 853 PNKYWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPK 674
PNKYWVESS KRYAPC EDT++GIVVD + DNF+VDIK+P LA LPVLAFEGGTRRNIPK
Sbjct: 61 PNKYWVESSHKRYAPCVEDTVLGIVVDCKPDNFLVDIKAPTLAFLPVLAFEGGTRRNIPK 120
Query: 673 FEMGTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCP 494
FE+GTL+Y RVVKAN+ M+PELSC D GKASEFG LK GYMF+ TCP
Sbjct: 121 FEIGTLLYVRVVKANNSMNPELSCVDETGKASEFGQLKDGYMFETSTGLSRMLLSSPTCP 180
Query: 493 VLDALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRL 314
VL+ALGK LS+EIAVGLNGRVWVNASSP TV++VSNAIM SESLSG QQKIMVEKLMQRL
Sbjct: 181 VLEALGKTLSYEIAVGLNGRVWVNASSPSTVILVSNAIMNSESLSGVQQKIMVEKLMQRL 240
Query: 313 Q 311
Q
Sbjct: 241 Q 241
>ONK81783.1 uncharacterized protein A4U43_C01F32830 [Asparagus officinalis]
Length = 242
Score = 341 bits (875), Expect = e-113
Identities = 167/241 (69%), Positives = 199/241 (82%)
Frame = -3
Query: 1033 MEVEPGNPPLKANVDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLK 854
ME++ N + +++ VVPGDVVLDL +T QTIKLG GLRQ+CDTI++ KAG+L LK
Sbjct: 1 MEIDSSNSHPTSLLEKIVVPGDVVLDLSKLTNQTIKLGAGLRQECDTISSMKAGKLRHLK 60
Query: 853 PNKYWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPK 674
PNKYW+ESS+KRYAPC ED I+GIVVDS+ DNF++DIK P+LA LPVLAFEGGTRRNIPK
Sbjct: 61 PNKYWIESSEKRYAPCVEDAILGIVVDSKPDNFLIDIKGPSLAFLPVLAFEGGTRRNIPK 120
Query: 673 FEMGTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCP 494
FE+G+L+Y RVVKANSGM+ ELSCTD+ GKA+EFGPLKGGYMF+ TCP
Sbjct: 121 FEVGSLLYVRVVKANSGMNAELSCTDASGKAAEFGPLKGGYMFETSTGLSRMLLSSPTCP 180
Query: 493 VLDALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRL 314
VL+ALGKKLSFE AVGLNGRVWVNASSP TV++VSNAI SE LSG QQ+IMVEKL+QR+
Sbjct: 181 VLEALGKKLSFETAVGLNGRVWVNASSPSTVILVSNAIKSSEFLSGVQQRIMVEKLLQRV 240
Query: 313 Q 311
+
Sbjct: 241 E 241
>XP_012478610.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Gossypium raimondii] KJB30309.1 hypothetical protein
B456_005G137000 [Gossypium raimondii]
Length = 240
Score = 340 bits (872), Expect = e-113
Identities = 165/228 (72%), Positives = 190/228 (83%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
VD VVPGDVVLDL +MT QTIKLG GLRQDCD I+A KAG L F KPNKYW+ESSQKRY
Sbjct: 13 VDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGTLRFSKPNKYWIESSQKRY 72
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC EDTI+GIVVDS++DNF++DIK PA+ LPVLAFEGGTRRNIPKFE+GTL+Y RVVK
Sbjct: 73 VPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVGTLLYLRVVK 132
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN GM+PELSCTD+ GKA+EFGPLK GYMF+ CPVL+ALGKKLSFEI
Sbjct: 133 ANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPACPVLEALGKKLSFEI 192
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNA+SP+T+V+V+NAIM SE LSGAQQ IMV+ L++ +Q
Sbjct: 193 AVGLNGRVWVNAASPDTIVVVANAIMNSECLSGAQQIIMVDHLLKNIQ 240
>XP_014492890.1 PREDICTED: putative exosome complex component rrp40 [Vigna radiata
var. radiata] XP_014492891.1 PREDICTED: putative exosome
complex component rrp40 [Vigna radiata var. radiata]
Length = 240
Score = 339 bits (870), Expect = e-113
Identities = 172/242 (71%), Positives = 198/242 (81%), Gaps = 1/242 (0%)
Frame = -3
Query: 1033 MEVEPGNPPLKAN-VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFL 857
ME +P + AN VDQ V PGDVVLDL +MT QTIKLG GLRQDCD I+ KAGRL F
Sbjct: 1 METKPSSS--SANFVDQLVCPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGRLRFS 58
Query: 856 KPNKYWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIP 677
KPNKYWVE+SQKRY P ED+++GIV DSRSDNF+VDIK PA+A LPVLAFEGGTRRNIP
Sbjct: 59 KPNKYWVENSQKRYVPHAEDSVLGIVADSRSDNFLVDIKGPAIAFLPVLAFEGGTRRNIP 118
Query: 676 KFEMGTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTC 497
KFE+GTL+Y+RVVKAN GM+PELSCTD+ GKA+EFG LK GYMF+ TC
Sbjct: 119 KFEIGTLLYARVVKANPGMNPELSCTDATGKAAEFGALKDGYMFECTTGLSRRLLSSPTC 178
Query: 496 PVLDALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQR 317
PVLDALGKK+SFEIAVGLNGRVWV A+SP+T +IV+NAIM SE+LS AQQ+IMVEKL+QR
Sbjct: 179 PVLDALGKKISFEIAVGLNGRVWVKAASPQTTIIVANAIMNSETLSDAQQRIMVEKLLQR 238
Query: 316 LQ 311
+Q
Sbjct: 239 IQ 240
>XP_002318044.1 exonuclease-related family protein [Populus trichocarpa] ABK93275.1
unknown [Populus trichocarpa] EEE96264.1
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 339 bits (870), Expect = e-113
Identities = 165/228 (72%), Positives = 190/228 (83%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
+D VVPGDVV+DL +MT QTIKLG GLRQDCD I+ KAG+L F KPNKYWVE+SQKRY
Sbjct: 13 IDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNKYWVETSQKRY 72
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC ED+++GIVVDS+SDNF++DIK PALA LPVLAFEGGTRRNIPKFE GTL+Y RVVK
Sbjct: 73 VPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVK 132
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN GM+PELSCTD+ GKA+EFG LK GYMF+ TCPVL+ALGKKLSFEI
Sbjct: 133 ANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPVLEALGKKLSFEI 192
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNA+SP V+IV+NAIM SE+LSG QQKIM EKL+Q++Q
Sbjct: 193 AVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKIQ 240
>XP_011044305.1 PREDICTED: putative exosome complex component rrp40 [Populus
euphratica]
Length = 242
Score = 339 bits (869), Expect = e-112
Identities = 166/228 (72%), Positives = 190/228 (83%)
Frame = -3
Query: 994 VDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNKYWVESSQKRY 815
+D VVPGDVV+DL +MT QTIKLG GLRQDCD I+ KAG+L F KPNKYWVE+SQKRY
Sbjct: 13 IDNLVVPGDVVVDLSSMTNQTIKLGGGLRQDCDAISVMKAGKLRFSKPNKYWVETSQKRY 72
Query: 814 APCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEMGTLIYSRVVK 635
PC ED+I+GIVVDS+SDNF++D+K PALA LPVLAFEGGTRRNIPKFE GTL+Y RVVK
Sbjct: 73 VPCAEDSILGIVVDSKSDNFLIDMKGPALAFLPVLAFEGGTRRNIPKFEAGTLLYVRVVK 132
Query: 634 ANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLDALGKKLSFEI 455
AN GMSPELSCTD+ GKA+EFG LK GYMF+ TCPVL+ALGKKLSFEI
Sbjct: 133 ANPGMSPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPVLEALGKKLSFEI 192
Query: 454 AVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
AVGLNGRVWVNA+SP V+IV+NAIM SE+LSG QQKIM EKL+Q++Q
Sbjct: 193 AVGLNGRVWVNANSPSIVIIVANAIMNSETLSGIQQKIMAEKLLQKIQ 240
>OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Corchorus
capsularis]
Length = 240
Score = 337 bits (865), Expect = e-112
Identities = 166/238 (69%), Positives = 194/238 (81%)
Frame = -3
Query: 1024 EPGNPPLKANVDQAVVPGDVVLDLKNMTTQTIKLGHGLRQDCDTITATKAGRLNFLKPNK 845
E G+P + +D VVPGDVVLDL +MT QTIKLG GLRQDCD I+ KAG L F KPNK
Sbjct: 5 ESGSPA--SFIDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGTLRFTKPNK 62
Query: 844 YWVESSQKRYAPCTEDTIIGIVVDSRSDNFIVDIKSPALASLPVLAFEGGTRRNIPKFEM 665
YWVESSQKRY PC EDT++GIVVDS++DN ++DIK PALA LPVLAFEGGTRRNIPKFE+
Sbjct: 63 YWVESSQKRYVPCVEDTVLGIVVDSKADNLLIDIKGPALAFLPVLAFEGGTRRNIPKFEV 122
Query: 664 GTLIYSRVVKANSGMSPELSCTDSQGKASEFGPLKGGYMFDXXXXXXXXXXXXXTCPVLD 485
GTL+Y RVVKAN GM+PELSCTD+ GKA+EFGPLK GYMF+ TCPVL+
Sbjct: 123 GTLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPVLE 182
Query: 484 ALGKKLSFEIAVGLNGRVWVNASSPETVVIVSNAIMRSESLSGAQQKIMVEKLMQRLQ 311
ALGKK+SFEIAVGLNGR WVNA+SPET+++V+NAIM SESLS AQQ IMVE L++ ++
Sbjct: 183 ALGKKISFEIAVGLNGRAWVNAASPETIIVVANAIMNSESLSAAQQIIMVEHLLKNIE 240