BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00004027
         (2062 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_007038959.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   577   0.0  
OMO75948.1 RNA polymerase sigma-70 [Corchorus capsularis]             575   0.0  
OMO56397.1 RNA polymerase sigma-70 [Corchorus olitorius]              570   0.0  
XP_017636101.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   570   0.0  
XP_016737339.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   568   0.0  
XP_016716409.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   567   0.0  
KJB52622.1 hypothetical protein B456_008G270500 [Gossypium raimo...   568   0.0  
XP_012440029.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   566   0.0  
XP_011084487.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   566   0.0  
XP_002268709.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   565   0.0  
XP_010266467.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   561   0.0  
XP_015878246.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   555   0.0  
XP_010523561.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   554   0.0  
XP_019230135.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   553   0.0  
XP_009785134.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   552   0.0  
XP_015070568.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   551   0.0  
XP_007219010.1 hypothetical protein PRUPE_ppa004259mg [Prunus pe...   550   0.0  
XP_009601650.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   548   0.0  
XP_006350582.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   547   0.0  
XP_004234179.1 PREDICTED: RNA polymerase sigma factor sigE, chlo...   546   0.0  

>XP_007038959.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Theobroma cacao] EOY23460.1
            Sigma factor E isoform 1 [Theobroma cacao] EOY23461.1
            Sigma factor E isoform 1 [Theobroma cacao]
          Length = 516

 Score =  577 bits (1487), Expect = 0.0
 Identities = 315/520 (60%), Positives = 374/520 (71%), Gaps = 5/520 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVV+VSSS  RTP+G   K  T R  +  RP  VAFK D + N A VT QE + +P E+
Sbjct: 1    MGVVSVSSSAARTPLGLSTKFSTQRCTSR-RPLTVAFKADKSDNTALVTPQEHILLPIET 59

Query: 1676 VKE--QRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLN-ADGISTL 1506
             KE  +R G                T++   C+LE+DYNE AA LE+IYKL+ A   S +
Sbjct: 60   AKEHPKRRGKAKKDPKIVNHVF---TDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDV 116

Query: 1505 EELGSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCM 1326
            EE+                 +++G ++              RL+LD RIAL+  RE+  +
Sbjct: 117  EEVEGKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPV 176

Query: 1325 SSVTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTK 1146
             SV  R KS E     IDRLVRDYSASTDLVSLDW+KMKIPPVLPS+EHTWLFKLMQP K
Sbjct: 177  VSVR-RKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMK 235

Query: 1145 AILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVIN 966
            A+L+ K++L+ DLG++PT+ E           +R+ LE+G AARNKLIKHNLRLVLF IN
Sbjct: 236  ALLQAKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSIN 295

Query: 965  KYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFS 786
            KY+QDF NG +FQDLCQAGVKGLITAIDRFEP+R FRLSTY LFWIRHAIIRSMT+SSF+
Sbjct: 296  KYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLSSFT 355

Query: 785  RVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSR 606
            RV FG+ES+R EIQR KL+L+FEL R PT+EEI+ +VG+SP+RY ++MRASK + SLHSR
Sbjct: 356  RVSFGLESVRVEIQRAKLELLFELHREPTEEEIIKKVGISPERYQEVMRASKPVASLHSR 415

Query: 605  HKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 426
            H VTQEEFI GITD+DGVGGD RRQPA            LKPKES+VIRQRYGLDGKGDR
Sbjct: 416  HSVTQEEFINGITDIDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 475

Query: 425  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 476  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>OMO75948.1 RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 516

 Score =  575 bits (1483), Expect = 0.0
 Identities = 319/520 (61%), Positives = 370/520 (71%), Gaps = 5/520 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTV-QEPVSIPKE 1680
            MGVV+VSSS  RTP+G G K  T +  +  RP  VAFK D + N A VT  Q+ + +P E
Sbjct: 1    MGVVSVSSSAARTPLGLGSKFYTQKCTSR-RPLIVAFKADKSNNTALVTPHQDHILLPLE 59

Query: 1679 SVKEQ--RTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTL 1506
            + KE+  R G                T+E   C+LE+DYNE AA LE+IYKL+    ++ 
Sbjct: 60   TAKEKPKRRGKAKKASKTVNRVF---TDEVSPCTLEVDYNEAAAKLENIYKLSPSTTTSD 116

Query: 1505 EELGSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCM 1326
             E                   DE                  RL+LDKRIALR+ REK  +
Sbjct: 117  VEEVEGKLKGGRRGRKRSKESDEKADESNQIVVKNQTKKNKRLSLDKRIALRNNREKKHV 176

Query: 1325 SSVTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTK 1146
             SVT R KS E     IDRLVRDYSASTDLVSLDWKKMKIPPVLPS EHTWLFKLMQP K
Sbjct: 177  VSVT-RKKSHENESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMK 235

Query: 1145 AILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVIN 966
            A+LE K+ L+ +LG++PT+ E           +RR LE+G AAR+KLIKHNLRLVLFVIN
Sbjct: 236  ALLETKQELQKNLGRDPTEDELAEATNMSAAEVRRHLEVGRAARSKLIKHNLRLVLFVIN 295

Query: 965  KYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFS 786
            KY+QDF NG +FQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMT+SSF+
Sbjct: 296  KYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFT 355

Query: 785  RVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSR 606
            RV FG+ES+R EIQR KL+L+FEL R PT++EI+ +VG+SP+RY ++MRASK + SLHSR
Sbjct: 356  RVSFGLESVRVEIQRAKLELLFELHREPTEDEIVKKVGISPERYQEVMRASKSVASLHSR 415

Query: 605  HKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 426
            H VTQEE I GITDVDGVGGD RRQPA            LKPKES+VIRQRYGLDGKGDR
Sbjct: 416  HSVTQEELISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 475

Query: 425  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 476  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>OMO56397.1 RNA polymerase sigma-70 [Corchorus olitorius]
          Length = 516

 Score =  570 bits (1468), Expect = 0.0
 Identities = 317/520 (60%), Positives = 368/520 (70%), Gaps = 5/520 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTV-QEPVSIPKE 1680
            MGVV+VSSS  RTP+G G K  T +  +  RP  VAFK D   N A VT  Q+ + +P E
Sbjct: 1    MGVVSVSSSAARTPLGLGSKFYTQKCTSR-RPLIVAFKADKPNNTALVTPHQDHILLPLE 59

Query: 1679 SVKEQ--RTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTL 1506
            + KE+  R G                T+E   C+LE+DYNE AA LE+IYKL+    ++ 
Sbjct: 60   TAKEKPKRRGKAKKASKTVSRVF---TDEVSPCTLEVDYNEAAAKLENIYKLSPSTTTSD 116

Query: 1505 EELGSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCM 1326
             E                   DE                  RL+LDKRIAL++ REK  +
Sbjct: 117  VEEVEGKLKGGRRRRKRSKESDEKADESNQIVVKNHTKKKKRLSLDKRIALKNYREKKHV 176

Query: 1325 SSVTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTK 1146
             SVT R KS E     IDRLVRDYSASTDLVSLDWKKMKIPPVLPS EHTWLFKLMQP K
Sbjct: 177  VSVT-RKKSYENESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMK 235

Query: 1145 AILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVIN 966
            A+LE  + L+ +LG++PT+ E           +RR LE+G AAR+KLIKHNLRLVLFVIN
Sbjct: 236  ALLETTEELQKNLGRDPTEDELAEATNMSAAEVRRHLEVGRAARSKLIKHNLRLVLFVIN 295

Query: 965  KYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFS 786
            KY+QDF NG +FQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMT+SSF+
Sbjct: 296  KYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFT 355

Query: 785  RVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSR 606
            RV FG+ES+R EIQR KL+L+FEL R PT++EI+ +VG+SP+RY ++MRASK + SLHSR
Sbjct: 356  RVSFGLESVRVEIQRAKLELLFELHREPTEDEIVKKVGISPERYQEVMRASKSVASLHSR 415

Query: 605  HKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 426
            H VTQEE I GITDVDGVGGD RRQPA            LKPKES+VIRQRYGLDGKGDR
Sbjct: 416  HSVTQEELISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 475

Query: 425  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 476  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>XP_017636101.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Gossypium arboreum]
            KHG11410.1 RNA polymerase sigma factor rpoD [Gossypium
            arboreum]
          Length = 516

 Score =  570 bits (1468), Expect = 0.0
 Identities = 317/522 (60%), Positives = 373/522 (71%), Gaps = 7/522 (1%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVV+VSSS  RTP+G G K  T R     RPC +AFK D + N A VT+++   +P E+
Sbjct: 1    MGVVSVSSSAARTPVGLGTKFSTQRCTFR-RPCIMAFKADKSNNTALVTLRDHNLLPVET 59

Query: 1676 VKE--QRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLE 1503
             KE  +R G                T+E    ++++DYNE AA LE+IYKL+     T +
Sbjct: 60   AKEHPKRRGKAKKASKTVNRDF---TDEGSPYTVDVDYNEAAAKLENIYKLSPS-TQTFD 115

Query: 1502 ELGSTXXXXXXXXXXXXXXEDEGTS--AXXXXXXXXXXXXXXRLTLDKRIALRSKREKLC 1329
            E GS               E +G +                 RL LDKRI L+  RE+  
Sbjct: 116  EKGSEGETKGRHLRRKRSTESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREE-- 173

Query: 1328 MSSVTGRLKSKERSEHD-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQP 1152
             S V+G+ K    +E + IDRLVRDYSASTDLVSLDWKKMKIPPVLPS EHTWLFKLMQP
Sbjct: 174  KSVVSGQSKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQP 233

Query: 1151 TKAILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFV 972
             KA+LE K++L+ DLG++PT+ E           +RRQLE+G AARNKLIKHNLRLVLFV
Sbjct: 234  MKALLEAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFV 293

Query: 971  INKYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSS 792
            INKY+QDF NG +FQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMT+SS
Sbjct: 294  INKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSS 353

Query: 791  FSRVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLH 612
            F+RV FG+ES+R EIQR KL+L+FEL R PTD+E++ RVG+SP+RY ++MRASK + SLH
Sbjct: 354  FTRVSFGLESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLH 413

Query: 611  SRHKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKG 432
             RH VTQEEFI GITDVDGVGGD RRQPA            LKPKES+VIRQRYGLDGKG
Sbjct: 414  LRHSVTQEEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 473

Query: 431  DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            DRTLGEI+GNLNISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 474  DRTLGEISGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>XP_016737339.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Gossypium hirsutum]
          Length = 516

 Score =  568 bits (1463), Expect = 0.0
 Identities = 317/522 (60%), Positives = 372/522 (71%), Gaps = 7/522 (1%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVV+VSSS  RTP+G G K  T R     RPC VAFK D + N A VT+++   +P E+
Sbjct: 1    MGVVSVSSSAARTPVGLGTKFSTQRCTFR-RPCIVAFKADKSNNTALVTLRDHNLLPVET 59

Query: 1676 VKE--QRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLE 1503
             KE  +R G                T+E    ++++DYNE AA LE+IYKL+     T +
Sbjct: 60   AKEHPKRRGKAKKASKTVNRDF---TDEGSPYTVDVDYNEAAAKLENIYKLSPS-TQTFD 115

Query: 1502 ELGSTXXXXXXXXXXXXXXEDEGTS--AXXXXXXXXXXXXXXRLTLDKRIALRSKREKLC 1329
            E GS               E +G +                 RL LDKRI L+  RE+  
Sbjct: 116  EKGSEGETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREE-- 173

Query: 1328 MSSVTGRLKSKERSEHD-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQP 1152
             S V+G+ K    +E + IDRLVRDYSASTDLVSLDWKKMKIPPVLPS EHTWLFKLMQP
Sbjct: 174  KSVVSGQSKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQP 233

Query: 1151 TKAILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFV 972
             KA+LE K++L+ DLG++PT+ E           +RRQLE+G AARNKLIKHNLRLVLFV
Sbjct: 234  MKALLEAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFV 293

Query: 971  INKYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSS 792
            I KY+QDF NG +FQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMT+SS
Sbjct: 294  IKKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSS 353

Query: 791  FSRVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLH 612
            F+RV FG+ES+R EIQR KL+L+FEL R PTD+E++ RVG+SP+RY ++MRASK + SLH
Sbjct: 354  FTRVSFGLESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLH 413

Query: 611  SRHKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKG 432
             RH VTQEEFI GITDVDGVGGD RRQPA            LKPKES+VIRQRYGLDGKG
Sbjct: 414  LRHSVTQEEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 473

Query: 431  DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            DRTLGEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 474  DRTLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>XP_016716409.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Gossypium hirsutum]
            XP_016716411.1 PREDICTED: RNA polymerase sigma factor
            sigE, chloroplastic/mitochondrial-like [Gossypium
            hirsutum]
          Length = 516

 Score =  567 bits (1462), Expect = 0.0
 Identities = 316/522 (60%), Positives = 372/522 (71%), Gaps = 7/522 (1%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVV+VSSS  RTP+G G K  T R     RPC +AFK D   N A VT+++   +P E+
Sbjct: 1    MGVVSVSSSAARTPVGLGTKFSTQRCTFR-RPCIMAFKADKFNNTALVTLRDHNLLPVET 59

Query: 1676 VKE--QRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLE 1503
             KE  +R G                T+E    ++++DYNE AA LE+IYKL+     T +
Sbjct: 60   AKEHPKRRGKAKKASKTVNRDF---TDEGSPYTVDVDYNEAAAKLENIYKLSPS-TQTFD 115

Query: 1502 ELGSTXXXXXXXXXXXXXXEDEGTS--AXXXXXXXXXXXXXXRLTLDKRIALRSKREKLC 1329
            E GS               E +G +                 RL LDKRI L+  RE+  
Sbjct: 116  EKGSEGETKGRHLRGKRSTESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREE-- 173

Query: 1328 MSSVTGRLKSKERSEHD-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQP 1152
             S V+G+ K    +E + IDRLVRDYSASTDLVSLDWKKMKIPPVLPS EHTWLFKLMQP
Sbjct: 174  KSVVSGQSKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQP 233

Query: 1151 TKAILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFV 972
             KA+LE K++L+ DLG++PT+ E           +RRQLE+G AARNKLIKHNLRLVLFV
Sbjct: 234  MKALLEAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFV 293

Query: 971  INKYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSS 792
            INKY+QDF NG +FQDLCQAG KGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMT+SS
Sbjct: 294  INKYFQDFANGPRFQDLCQAGAKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSS 353

Query: 791  FSRVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLH 612
            F+RV FG+ES+R EIQR KL+L+FEL R PTD+E++ RVG+SP+RY ++MRASK ++SLH
Sbjct: 354  FTRVSFGLESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVVSLH 413

Query: 611  SRHKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKG 432
             RH VTQEEFI GITDVDGVGGD RRQPA            LKPKES+VIRQRYGLDGKG
Sbjct: 414  LRHSVTQEEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 473

Query: 431  DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            DRTLGEI+GNLNISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 474  DRTLGEISGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>KJB52622.1 hypothetical protein B456_008G270500 [Gossypium raimondii]
          Length = 547

 Score =  568 bits (1464), Expect = 0.0
 Identities = 317/524 (60%), Positives = 373/524 (71%), Gaps = 7/524 (1%)
 Frame = -3

Query: 1856 FGMGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPK 1683
            F MGVV+VSSS  RTP+G G K  T R     RPC VAFK D + N A VT+++   +P 
Sbjct: 30   FEMGVVSVSSSAARTPVGLGTKFSTQRCTFR-RPCIVAFKADKSNNTALVTLRDHNLLPV 88

Query: 1682 ESVKE--QRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGIST 1509
            E+ KE  +R G                T+E    ++++DYNE AA LE+IYKL+     T
Sbjct: 89   ETAKEHPKRRGKAKKASKTVNRDF---TDEGSPYTVDVDYNEAAAKLENIYKLSPS-TQT 144

Query: 1508 LEELGSTXXXXXXXXXXXXXXEDEGTS--AXXXXXXXXXXXXXXRLTLDKRIALRSKREK 1335
             +E GS               E +G +                 RL LDKRI L+  RE+
Sbjct: 145  FDEKGSEGETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREE 204

Query: 1334 LCMSSVTGRLKSKERSEHD-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLM 1158
               S V+G+ K    +E + IDRLVRDYSASTDLVSLDWKKMK+PPVLPS EHTWLFKLM
Sbjct: 205  --KSVVSGQSKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLM 262

Query: 1157 QPTKAILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVL 978
            QP KA+LE K++L+ DLG++PT+ E           +RRQLE+G AARNKLIKHNLRLVL
Sbjct: 263  QPMKALLEAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVL 322

Query: 977  FVINKYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTV 798
            FVI KY+QDF NG +FQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMT+
Sbjct: 323  FVIKKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTL 382

Query: 797  SSFSRVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILS 618
            SSF+RV FG+ES+R EIQR KL+L+FEL R PTD+E++ RVG+SP+RY ++MRASK + S
Sbjct: 383  SSFTRVSFGLESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVAS 442

Query: 617  LHSRHKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDG 438
            LH RH VTQEEFI GITDVDGVGGD RRQPA            LKPKES+VIRQRYGLDG
Sbjct: 443  LHLRHSVTQEEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDG 502

Query: 437  KGDRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            KGDRTLGEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 503  KGDRTLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRRYV 546


>XP_012440029.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Gossypium raimondii]
            XP_012440030.1 PREDICTED: RNA polymerase sigma factor
            sigE, chloroplastic/mitochondrial [Gossypium raimondii]
            KJB52623.1 hypothetical protein B456_008G270500
            [Gossypium raimondii] KJB52624.1 hypothetical protein
            B456_008G270500 [Gossypium raimondii]
          Length = 516

 Score =  567 bits (1460), Expect = 0.0
 Identities = 316/522 (60%), Positives = 372/522 (71%), Gaps = 7/522 (1%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVV+VSSS  RTP+G G K  T R     RPC VAFK D + N A VT+++   +P E+
Sbjct: 1    MGVVSVSSSAARTPVGLGTKFSTQRCTFR-RPCIVAFKADKSNNTALVTLRDHNLLPVET 59

Query: 1676 VKE--QRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLE 1503
             KE  +R G                T+E    ++++DYNE AA LE+IYKL+     T +
Sbjct: 60   AKEHPKRRGKAKKASKTVNRDF---TDEGSPYTVDVDYNEAAAKLENIYKLSPS-TQTFD 115

Query: 1502 ELGSTXXXXXXXXXXXXXXEDEGTS--AXXXXXXXXXXXXXXRLTLDKRIALRSKREKLC 1329
            E GS               E +G +                 RL LDKRI L+  RE+  
Sbjct: 116  EKGSEGETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREE-- 173

Query: 1328 MSSVTGRLKSKERSEHD-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQP 1152
             S V+G+ K    +E + IDRLVRDYSASTDLVSLDWKKMK+PPVLPS EHTWLFKLMQP
Sbjct: 174  KSVVSGQSKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLMQP 233

Query: 1151 TKAILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFV 972
             KA+LE K++L+ DLG++PT+ E           +RRQLE+G AARNKLIKHNLRLVLFV
Sbjct: 234  MKALLEAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFV 293

Query: 971  INKYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSS 792
            I KY+QDF NG +FQDLCQAGVKGLITAIDRFEP+R FRLSTYGLFWIRHAIIRSMT+SS
Sbjct: 294  IKKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSS 353

Query: 791  FSRVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLH 612
            F+RV FG+ES+R EIQR KL+L+FEL R PTD+E++ RVG+SP+RY ++MRASK + SLH
Sbjct: 354  FTRVSFGLESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLH 413

Query: 611  SRHKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKG 432
             RH VTQEEFI GITDVDGVGGD RRQPA            LKPKES+VIRQRYGLDGKG
Sbjct: 414  LRHSVTQEEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG 473

Query: 431  DRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            DRTLGEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 474  DRTLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRRYV 515


>XP_011084487.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial-like [Sesamum indicum]
          Length = 518

 Score =  566 bits (1458), Expect = 0.0
 Identities = 310/520 (59%), Positives = 371/520 (71%), Gaps = 3/520 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  RTP+G   + LT R     R   ++FK D NKN A +  +E V++P E+
Sbjct: 1    MGVVTVSSSAARTPLGLDARYLT-RVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEA 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLEEL 1497
             KE+                  +T+EA   ++++DYNE AA LE IYK +     +LEE+
Sbjct: 60   KKEKEK-RSRKVKKLVERVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEV 118

Query: 1496 GSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMSSV 1317
                              +E                  RLTL+KRIAL++ +E   ++S 
Sbjct: 119  KDQRVKRRRPLRKRTGEAEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASS 178

Query: 1316 TGRLKSKERSEHD-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKAI 1140
            + + K ++  E + IDRLVRDYSASTDLVSLDWKKMKIPPVLPS EH WLFKLMQP KAI
Sbjct: 179  SQKRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 238

Query: 1139 LEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINKY 960
            L+VK++L+ DLG+E TD E           LR+QLE+G AARNKLIKHNLRLVLFV+NKY
Sbjct: 239  LQVKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 298

Query: 959  YQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSRV 780
            +QDF NG +FQDLCQAGVKGLITAIDRFEPKR FRLSTY LFWIRHAIIRSMT+SSF++V
Sbjct: 299  FQDFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLSSFTKV 358

Query: 779  PFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRHK 600
             FG+ES+R EIQ+ KL+L+FEL RLP+DEEI+ RVG+SP+RY+++MR SK I SLH+RH 
Sbjct: 359  SFGLESVRVEIQKAKLELLFELQRLPSDEEIVNRVGISPERYHEVMRVSKPISSLHARHA 418

Query: 599  VTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 420
            VTQEEFI GI+DVD V GDKRRQPA            LKPKES+VIRQRYGLDGKGDRTL
Sbjct: 419  VTQEEFINGISDVDDVEGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 478

Query: 419  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHIGK 300
            GEIAGNLNISREMVRKHEVKALMKLKHPAR+DYLRR+I K
Sbjct: 479  GEIAGNLNISREMVRKHEVKALMKLKHPARIDYLRRYIYK 518


>XP_002268709.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Vitis vinifera] CBI22546.3
            unnamed protein product, partial [Vitis vinifera]
          Length = 518

 Score =  565 bits (1455), Expect = 0.0
 Identities = 305/520 (58%), Positives = 368/520 (70%), Gaps = 5/520 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS----RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPK 1683
            MGVVTVSSS    RTP G   K    ++P   RP  +AFK D  KN A VT  EP+ +P 
Sbjct: 1    MGVVTVSSSASASRTPFGLNAKFSNHQTPLR-RPLVLAFKADKAKNIALVTPHEPIPLPI 59

Query: 1682 ESVKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLN-ADGISTL 1506
            E+ K+ +                   E +P CS+E+DYNE AA LE+IYKL+ A  +S  
Sbjct: 60   ETSKDHKKRLRRASKPSKRVKAVSTDEVSP-CSVELDYNEAAAKLENIYKLSPATDVSEA 118

Query: 1505 EELGSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCM 1326
            E+L                 +D+                  RL+L+KRIAL   +++  +
Sbjct: 119  EDLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAV 178

Query: 1325 SSVTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTK 1146
            +S+  +  SK   E+ ID LVR+YSASTDLVSLDWKKMKIPPVLP  EH WLFKLMQP K
Sbjct: 179  ASIQKKRDSKNEDEN-IDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMK 237

Query: 1145 AILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVIN 966
             +LEVK +L+ DLG+EPTD E           +RR +E+G AARNKLIKHNLRLVLFVIN
Sbjct: 238  GLLEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVIN 297

Query: 965  KYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFS 786
            KY+Q+F NG KFQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMT+SSF+
Sbjct: 298  KYFQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLSSFT 357

Query: 785  RVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSR 606
            RV FG+ES+R EIQR KL+L+F+L RLPT+EEI+ +VG+SP+RY+++MRASK +LSLH+R
Sbjct: 358  RVSFGLESVRVEIQRAKLELLFKLQRLPTEEEIIEKVGISPERYHEVMRASKSVLSLHAR 417

Query: 605  HKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 426
            H  TQEE+I GITDV+GVGGD+ RQ A            LKPKES+V+RQRYGLDGKGDR
Sbjct: 418  HATTQEEYINGITDVEGVGGDRGRQLALLRLALDDVLDSLKPKESLVMRQRYGLDGKGDR 477

Query: 425  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            TLGEIAGNL+ISREMVRKHEVKALMKLKHPARVDYLR++I
Sbjct: 478  TLGEIAGNLSISREMVRKHEVKALMKLKHPARVDYLRQYI 517


>XP_010266467.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nelumbo nucifera]
          Length = 514

 Score =  561 bits (1446), Expect = 0.0
 Identities = 300/518 (57%), Positives = 368/518 (71%), Gaps = 3/518 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  +TP+G   +  +       RP  +AFKTD  K++A VT  EP+ +P ++
Sbjct: 1    MGVVTVSSSSSQTPLGLSSR-FSVHQTQLKRPLILAFKTDKAKDRALVTHHEPIPLPMDT 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNAD-GISTLEE 1500
             KE +                  ++EA  C++EMDYN+VAA LESIYKL+    +S +++
Sbjct: 60   PKENQK-RLRRATKPSKRVKVVCSDEASSCTIEMDYNDVAAKLESIYKLSPPTDVSDVDD 118

Query: 1499 LGSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMSS 1320
                               D  T                RL+LD+RIALR K+E+  +  
Sbjct: 119  TDRVGRRRRRTRKKLGEA-DRKTGKESSDNVIRNHNKNKRLSLDRRIALRRKKEEGAVQ- 176

Query: 1319 VTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKAI 1140
                +K   + + D+D+LV +YS STDL SLDWKKMKIPPVLPS EH WLFKLMQP  A+
Sbjct: 177  -LSGVKEGSKEDGDVDKLVGEYSVSTDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMNAL 235

Query: 1139 LEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINKY 960
             ++K++L  DLG+EPTD E           +RR +E+G AARN+LIKHNLRLVLFVINKY
Sbjct: 236  FQMKENLHRDLGREPTDGELADSTNMSVFQVRRCIEVGRAARNRLIKHNLRLVLFVINKY 295

Query: 959  YQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSRV 780
            +Q+F NG KFQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMT+SSF+RV
Sbjct: 296  FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIMRSMTLSSFTRV 355

Query: 779  PFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRHK 600
             FG+ES+R EIQR KL+LMFEL+RLPT+EEI+ +VG+SP+RY+++++ASK + SLHSRH 
Sbjct: 356  SFGLESVRVEIQRAKLELMFELERLPTEEEIIKKVGISPERYHEVIKASKPVFSLHSRHA 415

Query: 599  VTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 420
            +TQEEFI GITD++GVGGDKRRQPA            LKPKES+VIRQRYGLDGKGDRTL
Sbjct: 416  ITQEEFINGITDIEGVGGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 475

Query: 419  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            GEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR+I
Sbjct: 476  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 513


>XP_015878246.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Ziziphus jujuba]
          Length = 515

 Score =  555 bits (1431), Expect = 0.0
 Identities = 308/519 (59%), Positives = 365/519 (70%), Gaps = 4/519 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  +TP+G   K  T++S  + +P  VAFK D     A V   E + +P E+
Sbjct: 1    MGVVTVSSSAAQTPLGLSPKFPTYQS-ISKKPLIVAFKADKFNETALVAPHEQIPLPIEA 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNA-DGISTLEE 1500
             KE +                  T+EA  C+LE+DYNE AA LE+IYKL+     S +E+
Sbjct: 60   RKEHQK-RLGKVNKPSKRVNAAITDEASTCTLEVDYNEAAAKLENIYKLSPMTDASDVED 118

Query: 1499 LGSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMSS 1320
            +G                 DE                  RL LDKR+ L  K+ K+   +
Sbjct: 119  VGGLKTRGRRRKKKISAD-DEEEKRTSGSFVRSRRKKAKRLNLDKRVEL--KKNKVDEVN 175

Query: 1319 VTGRLKSKERSEHD-IDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKA 1143
               R + +  SE+D I+ LVR+YSASTDLVSLDWKKMKIPPVLPS EH WLFKLMQP KA
Sbjct: 176  ACVRKRKESISENDNIENLVREYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPLKA 235

Query: 1142 ILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINK 963
            +L+V ++L+  LG++PT+ E           ++R LE+G AARNKLIKHNLRLVLFVINK
Sbjct: 236  LLQVNENLKQSLGRKPTEGELAEATNMSIAQVKRHLEVGRAARNKLIKHNLRLVLFVINK 295

Query: 962  YYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSR 783
            Y+QDF NG +FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAIIRSMT+SSF R
Sbjct: 296  YFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLSSFQR 355

Query: 782  VPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRH 603
            V FG+ES+R EIQ+ KL+LMFEL RLPT+EEI+ +VG+SP+RYN++MRASK + SLHSRH
Sbjct: 356  VSFGLESVRAEIQKAKLELMFELKRLPTEEEIIEKVGISPERYNEVMRASKAVFSLHSRH 415

Query: 602  KVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 423
             VTQEEFI GITDV+GV GD RRQPA            LKPKES+VIRQRYGLDG+GDRT
Sbjct: 416  AVTQEEFIDGITDVEGVEGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGRGDRT 475

Query: 422  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRR+I
Sbjct: 476  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 514


>XP_010523561.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Tarenaya hassleriana]
          Length = 504

 Score =  554 bits (1428), Expect = 0.0
 Identities = 306/518 (59%), Positives = 365/518 (70%), Gaps = 3/518 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVV+VSSS  R+P+G     LT RS A  RP  VAFK D + + A V  +E + +P E 
Sbjct: 1    MGVVSVSSSAARSPLGLSNNILTQRS-ALKRPSVVAFKADKSSHSALVIPREKILLPAEQ 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLEEL 1497
             KE+R                  T  AP  +L++DYNE AA LESI+KL+          
Sbjct: 60   PKEKRV-----PRKNPKKSKSSDTNVAPSSALDVDYNEAAARLESIFKLST--------- 105

Query: 1496 GSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIAL-RSKREKLCMSS 1320
             +T              E + T+               RL+LDKRI+L R+ +EK  ++S
Sbjct: 106  ATTRKVPSRRKRKDDSDEKKTTTKTAKMVVSNKTKRRKRLSLDKRISLKRNNQEKSAVAS 165

Query: 1319 VTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKAI 1140
            V  +   + + +  +DRLVRDYSASTD+VSLDWKKMKIPPVL S+EH+WLFKLMQP KA+
Sbjct: 166  VQKKTVKRLQEDEKMDRLVRDYSASTDIVSLDWKKMKIPPVLSSIEHSWLFKLMQPMKAL 225

Query: 1139 LEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINKY 960
            L+VK  L+ +LG+EPTDAE            +R++EIG AARNKLIKHNLRLVLFV+NKY
Sbjct: 226  LQVKDELQKNLGREPTDAEVADGANMSVAEAKRRIEIGRAARNKLIKHNLRLVLFVMNKY 285

Query: 959  YQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSRV 780
            +QDF NG KFQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAIIRSMT SSF+RV
Sbjct: 286  FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTRV 345

Query: 779  PFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRHK 600
            PFG+ES+R EIQR KL+L+FEL R+PT  EI+ R+G+SP+RY +++ A+K +LSL+SRH 
Sbjct: 346  PFGLESVRVEIQRAKLELLFELGRVPTGSEIVERLGISPERYREVVIAAKPVLSLNSRHA 405

Query: 599  VTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 420
            VTQEEFI GITD DGVG D RRQPA            LKPKES+VIRQRYGLDGKGDRTL
Sbjct: 406  VTQEEFIDGITDFDGVGSDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 465

Query: 419  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRR+I
Sbjct: 466  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYI 503


>XP_019230135.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana attenuata]
            OIT06417.1 rna polymerase sigma factor sige,
            chloroplasticmitochondrial [Nicotiana attenuata]
          Length = 518

 Score =  553 bits (1425), Expect = 0.0
 Identities = 302/518 (58%), Positives = 353/518 (68%), Gaps = 3/518 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  R+P+G   +      P   RP  V+FK D  K    V  +E +S+P E+
Sbjct: 1    MGVVTVSSSASRSPLGLSTRFSAHLCPLK-RPVVVSFKKDKTKKTTLVAPKESISLPIET 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLEEL 1497
             KE                      EA   +LE+DY+E AA LESIYK + +  S+  E 
Sbjct: 60   SKENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEA 119

Query: 1496 GSTXXXXXXXXXXXXXXEDE-GTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMSS 1320
                              DE                   RL LD+RIAL   +E   ++S
Sbjct: 120  KDHQIVKRRQRTRKRIVGDEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 179

Query: 1319 VTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKAI 1140
               R   ++  +  ID+LVR+YS +TDL SLDWKKMKIPPVLPS EH WLFKLMQP KAI
Sbjct: 180  SQNRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 239

Query: 1139 LEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINKY 960
            L+VK++L+ DLG+EPTDAE           LR+ LE+G AARNKLIKHNLRLVLFVINKY
Sbjct: 240  LQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 299

Query: 959  YQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSRV 780
            +QDF NG KFQDLCQAGVKGLITA+DRFEP R FRLSTYGLFWIRHAIIRSMT SSF++V
Sbjct: 300  FQDFANGPKFQDLCQAGVKGLITAVDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 359

Query: 779  PFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRHK 600
            PFG+ESIR EIQ+ KL+L+FEL R+PTDEEI+ RV LSP+RY+++M+ SK + SLH+RH 
Sbjct: 360  PFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARHM 419

Query: 599  VTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 420
             TQEEFI GITDVDGV GDKRRQPA            LKPKES+VIRQRYGLDGKGDRTL
Sbjct: 420  TTQEEFINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 479

Query: 419  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            GEIAGNLNISREMVRKHEVKALMKLKHP RVDYLR++I
Sbjct: 480  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRQYI 517


>XP_009785134.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana sylvestris]
            XP_016473301.1 PREDICTED: RNA polymerase sigma factor
            sigE, chloroplastic/mitochondrial-like [Nicotiana
            tabacum]
          Length = 519

 Score =  552 bits (1422), Expect = 0.0
 Identities = 303/519 (58%), Positives = 351/519 (67%), Gaps = 4/519 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  R+P+G   +      P   RP  V+FK D  K    V  +E +S+P E+
Sbjct: 1    MGVVTVSSSASRSPLGLSTRFSAHLCPLK-RPVVVSFKKDKTKKTTLVAPKESISLPIET 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYK--LNADGISTLE 1503
             KE                      EA    LE+DY+E AA LESIYK  L  D   T  
Sbjct: 60   SKENEKRSRRVSKRTERVHAVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEA 119

Query: 1502 ELGSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMS 1323
            +                  ++E                  RL LD+RIAL   +E   ++
Sbjct: 120  KDHQIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVA 179

Query: 1322 SVTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKA 1143
            S   R   ++  +  ID+LVR+YS +TDL SLDWKKMKIPPVLPS EH WLFKLMQP KA
Sbjct: 180  SSQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKA 239

Query: 1142 ILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINK 963
            IL+VK++L+ DLG+EPTDAE           LR+ LE+G AARNKLIKHNLRLVLFVINK
Sbjct: 240  ILQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINK 299

Query: 962  YYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSR 783
            Y+QDF NG KFQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAIIRSMT SSF++
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 359

Query: 782  VPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRH 603
            VPFG+ESIR EIQ+ KL+L+FEL R+PTDEEI+ RV LSP+RY+++M+ SK + SLH+RH
Sbjct: 360  VPFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARH 419

Query: 602  KVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 423
              TQEE I GITDVDGV GDKRRQPA            LKPKES+VIRQRYGLDGKGDRT
Sbjct: 420  MTTQEELINGITDVDGVDGDKRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT 479

Query: 422  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            LGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR+I
Sbjct: 480  LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 518


>XP_015070568.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X1 [Solanum
            pennellii]
          Length = 516

 Score =  551 bits (1419), Expect = 0.0
 Identities = 302/518 (58%), Positives = 357/518 (68%), Gaps = 3/518 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  R+P+G   +      P   RP  V+FK D  KN   V+ +E +S+P E+
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLK-RPVIVSFKKDKTKNTTLVSPKESISLPIET 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLEEL 1497
             KE                    T EAP  +LE+DY+E AA LESIYK + +  S   E+
Sbjct: 60   SKENEK--RSRRVTKRTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEV 117

Query: 1496 GSTXXXXXXXXXXXXXXEDE-GTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMSS 1320
                              DE                   RL LD+RIAL   +E   ++S
Sbjct: 118  KDHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLAS 177

Query: 1319 VTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKAI 1140
               R   ++  +  ID+LVR+YS +TDL SLDWKKMKIPPVLPS EHTWLFKLMQP KAI
Sbjct: 178  SERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAI 237

Query: 1139 LEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINKY 960
            L+VK++L+ DLG+EPTD E           LR++LE G AARNKLIKHNLRLVLFV+NKY
Sbjct: 238  LQVKENLQNDLGREPTDGEVAEATNIDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKY 297

Query: 959  YQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSRV 780
            +QDF N S+FQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAIIRSMT SSF++V
Sbjct: 298  FQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 357

Query: 779  PFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRHK 600
            PFG+ESIR EIQ+ KL+L+FEL R+PTD+EI+ RVG SP+RY+++M+ SK I SLH+R+K
Sbjct: 358  PFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNK 417

Query: 599  VTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 420
             TQEE I GITDVDGV GDKR+QPA            LKPKES+VIRQRYGLDGKGDRTL
Sbjct: 418  TTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 477

Query: 419  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            GEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RR+I
Sbjct: 478  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515


>XP_007219010.1 hypothetical protein PRUPE_ppa004259mg [Prunus persica] ONI25507.1
            hypothetical protein PRUPE_2G307500 [Prunus persica]
          Length = 519

 Score =  550 bits (1416), Expect = 0.0
 Identities = 295/520 (56%), Positives = 365/520 (70%), Gaps = 5/520 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  RTP+G   K LT +     +P  VAFKTD     A V  QE + +P E+
Sbjct: 1    MGVVTVSSSASRTPLGLSTK-LTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIET 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLN--ADGISTLE 1503
             K+ +                  T+ A  C+LE+DYNE AA LE++YK +   +  S +E
Sbjct: 60   RKKHQK-RLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVE 118

Query: 1502 EL-GSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCM 1326
            ++ G                 D+  +               RL+L+KR+AL+  +++  +
Sbjct: 119  DVDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVI 178

Query: 1325 SSVTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTK 1146
            SS+  + KS++     I+ LVR+YS STDLVSLDWKKMKIPPVL S EH WLFKLMQP K
Sbjct: 179  SSIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMK 238

Query: 1145 AILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVIN 966
             +LEVK++L+ DLG+EPT+ E           +++ LE+G AAR+KLIKHNLRLVLFV+N
Sbjct: 239  GLLEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMN 298

Query: 965  KYYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFS 786
            KY+QDF NG KFQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAIIRSMT+SSF+
Sbjct: 299  KYFQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLSSFT 358

Query: 785  RVPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSR 606
            RV FG+ES+R EIQ+ KL ++F L R+PT++EI+ +VG+SP+RY+++MRASK + SLHSR
Sbjct: 359  RVSFGLESVRAEIQKAKLGMLFALKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLHSR 418

Query: 605  HKVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDR 426
            H  TQEEFI GITDVDGV GD R++PA            LKPKES+VIRQRYGLDGKGDR
Sbjct: 419  HTTTQEEFINGITDVDGVEGDNRQKPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR 478

Query: 425  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRR++
Sbjct: 479  TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYV 518


>XP_009601650.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
            XP_016512797.1 PREDICTED: RNA polymerase sigma factor
            sigE, chloroplastic/mitochondrial-like [Nicotiana
            tabacum]
          Length = 519

 Score =  548 bits (1411), Expect = 0.0
 Identities = 301/519 (57%), Positives = 350/519 (67%), Gaps = 4/519 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  R+P+G          P   RP  V+FK D  K    V  +E +S+P E+
Sbjct: 1    MGVVTVSSSASRSPLGLSTSFSAHLCPLK-RPVVVSFKKDKTKKTTLVAPKESISLPIET 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYK--LNADGISTLE 1503
             KE                      EA   +LE+DY+E AA LESIYK  L  D   T  
Sbjct: 60   SKENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEA 119

Query: 1502 ELGSTXXXXXXXXXXXXXXEDEGTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMS 1323
            +                   +E                  RL LD+RIAL   +E   ++
Sbjct: 120  KDHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVA 179

Query: 1322 SVTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKA 1143
            S   R   ++  +  ID+LVR+YS +TDL SLDWKKMKIPPVLPS EH WLFKLMQP KA
Sbjct: 180  SSQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKA 239

Query: 1142 ILEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINK 963
            IL+VK++L+ DLG+EPTDAE           LR+ LE+G AARNKLIKHNLRLVLFVINK
Sbjct: 240  ILQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINK 299

Query: 962  YYQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSR 783
            Y+QDF NG KFQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAIIRSMT SSF++
Sbjct: 300  YFQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTK 359

Query: 782  VPFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRH 603
            VPFG+ESIR EIQ+ KL+L+FEL R+PTDEEI+ RV LSP+RY+++M+ SK + SLH+RH
Sbjct: 360  VPFGLESIRVEIQKAKLQLLFELQRMPTDEEIIERVRLSPERYHEVMKVSKPVFSLHARH 419

Query: 602  KVTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRT 423
              TQEEFI GITDVDGV G KR+QPA            LKPKES+VIRQRYGLDGKG+RT
Sbjct: 420  MTTQEEFINGITDVDGVDGVKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRT 479

Query: 422  LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            LGEIAGNLNISREMVRKHEVKALMKLKHP RVDYLRR+I
Sbjct: 480  LGEIAGNLNISREMVRKHEVKALMKLKHPTRVDYLRRYI 518


>XP_006350582.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial [Solanum tuberosum]
          Length = 516

 Score =  547 bits (1410), Expect = 0.0
 Identities = 300/518 (57%), Positives = 357/518 (68%), Gaps = 3/518 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  R+P+G   +  T   P   RP  V+FK D  KN   +  +E +S+  E+
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSTRLCPLK-RPVIVSFKKDKTKNTTLIAPKESISLSIET 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLEEL 1497
             KE                      EA   +LE+DY+E AA LESIYK + +  S+  E+
Sbjct: 60   SKENEKRSRRVSKRSERVHAVAI--EASPSTLELDYSEAAAKLESIYKRSLETASSNTEV 117

Query: 1496 GSTXXXXXXXXXXXXXXEDE-GTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMSS 1320
                              DE                   RL LD+RIAL   +E   ++S
Sbjct: 118  QDHLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVAS 177

Query: 1319 VTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKAI 1140
               R   ++  +  ID+LVR+YS +TDL SLDWKKMKIPPVLPS EH WLFKLMQP KAI
Sbjct: 178  SERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAI 237

Query: 1139 LEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINKY 960
            L+VK++L+ DLG+EPTD E           LR++LE+G AARNKLIKHNLRLVLFV+NKY
Sbjct: 238  LQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKY 297

Query: 959  YQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSRV 780
            +QDF NGS+FQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAIIRSMT SSF++V
Sbjct: 298  FQDFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTSSFTKV 357

Query: 779  PFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRHK 600
            PFG+ESIR EIQ+ KL+L+FEL R+PTDEEI+ RVGLSP+RY+++M+ SK + SLH+R+K
Sbjct: 358  PFGLESIRVEIQKAKLELLFELQRIPTDEEIIRRVGLSPERYHEVMKVSKPVSSLHARNK 417

Query: 599  VTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 420
             TQEE I GITDVDGV GDKR+QPA            LKPKES+VIRQRYGLDGKGDRTL
Sbjct: 418  TTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 477

Query: 419  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            GEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RR+I
Sbjct: 478  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515


>XP_004234179.1 PREDICTED: RNA polymerase sigma factor sigE,
            chloroplastic/mitochondrial isoform X1 [Solanum
            lycopersicum]
          Length = 516

 Score =  546 bits (1408), Expect = 0.0
 Identities = 301/518 (58%), Positives = 356/518 (68%), Gaps = 3/518 (0%)
 Frame = -3

Query: 1850 MGVVTVSSS--RTPIGFGVKSLTFRSPATLRPCCVAFKTDGNKNKAFVTVQEPVSIPKES 1677
            MGVVTVSSS  R+P+G   +      P   RP  V+FK D  KN   V+ +E +S P E+
Sbjct: 1    MGVVTVSSSASRSPLGLSSRFSARLCPLK-RPVIVSFKKDITKNTTLVSPKESISSPIET 59

Query: 1676 VKEQRTGXXXXXXXXXXXXXXXATEEAPLCSLEMDYNEVAATLESIYKLNADGISTLEEL 1497
             KE                    T EAP  +LE+DY+E AA LESIYK + +  S   E+
Sbjct: 60   SKENEK--RSRRVSKRTERVHAVTIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEV 117

Query: 1496 GSTXXXXXXXXXXXXXXEDE-GTSAXXXXXXXXXXXXXXRLTLDKRIALRSKREKLCMSS 1320
                              DE                   RL LD+RIAL   +E   ++S
Sbjct: 118  KDHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLAS 177

Query: 1319 VTGRLKSKERSEHDIDRLVRDYSASTDLVSLDWKKMKIPPVLPSLEHTWLFKLMQPTKAI 1140
               R  +++  +  ID+LVR+YS +TDL SLDWKKMKIPPVLPS EHTWLFKLMQP KAI
Sbjct: 178  SERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAI 237

Query: 1139 LEVKKSLETDLGKEPTDAEXXXXXXXXXXXLRRQLEIGHAARNKLIKHNLRLVLFVINKY 960
            L+VK++L+ DLG+EPTD E           LR++LE G AARNKLIKHNLRLVLFV+NKY
Sbjct: 238  LQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMNKY 297

Query: 959  YQDFGNGSKFQDLCQAGVKGLITAIDRFEPKRGFRLSTYGLFWIRHAIIRSMTVSSFSRV 780
            +QDF N S+FQDLCQAGVKGLITAIDRFEP R FRLSTYGLFWIRHAIIR MT SSF++V
Sbjct: 298  FQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTSSFTKV 357

Query: 779  PFGIESIRQEIQREKLKLMFELDRLPTDEEILTRVGLSPDRYNDIMRASKQILSLHSRHK 600
            PFG+ESIR EIQ+ KL+L+FEL R+PTD+EI+ RVG SP+RY+++M+ SK I SLH+R+K
Sbjct: 358  PFGLESIRVEIQKAKLELLFELQRIPTDDEIIKRVGFSPERYHEVMKVSKPIFSLHARNK 417

Query: 599  VTQEEFIKGITDVDGVGGDKRRQPAXXXXXXXXXXXXLKPKESMVIRQRYGLDGKGDRTL 420
             TQEE I GITDVDGV GDKR+QPA            LKPKES+VIRQRYGLDGKGDRTL
Sbjct: 418  TTQEELINGITDVDGVDGDKRKQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTL 477

Query: 419  GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRHI 306
            GEIAGNLNISREMVRKHEVKALMKLKHP RVDY+RR+I
Sbjct: 478  GEIAGNLNISREMVRKHEVKALMKLKHPTRVDYVRRYI 515