BLASTX nr result
ID: Alisma22_contig00003220
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00003220
(6036 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008806151.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2829 0.0
XP_010935180.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2820 0.0
AIO05697.1 DNA-directed RNA polymerase II subunit 1, partial [Co... 2817 0.0
XP_002285900.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2806 0.0
XP_010266907.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2806 0.0
XP_010941355.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2803 0.0
XP_009401403.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2799 0.0
XP_020113244.1 DNA-directed RNA polymerase II subunit 1 [Ananas ... 2798 0.0
JAT62993.1 DNA-directed RNA polymerase II subunit RPB1, partial ... 2794 0.0
JAT40747.1 DNA-directed RNA polymerase II subunit RPB1, partial ... 2794 0.0
KMZ69245.1 DNA-directed RNA polymerase [Zostera marina] 2794 0.0
XP_006659128.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2789 0.0
ONK55404.1 uncharacterized protein A4U43_UnF3880 [Asparagus offi... 2788 0.0
XP_015649819.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2779 0.0
XP_004972809.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2776 0.0
XP_017252141.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2760 0.0
XP_006828844.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2757 0.0
XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2756 0.0
XP_020186028.1 DNA-directed RNA polymerase II subunit 1-like [Ae... 2755 0.0
XP_002443877.1 hypothetical protein SORBIDRAFT_07g003680 [Sorghu... 2754 0.0
>XP_008806151.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 2829 bits (7334), Expect = 0.0
Identities = 1407/1536 (91%), Positives = 1457/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GGLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETCMANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+DTR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPK+RLKRIYD GD++D+Q QQD++EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
IDGMKM+AEYK KKKSD+QEQLPEPVERKQVL+AERVLSVLKRISDEDC LLGLDP YA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSE+E+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI KAK+ V +LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EFD +KYEID+D+WNP+YMLPEHVEDLK IREFRNVF+AE QKLEADRY
Sbjct: 901 KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+DFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEVNK KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+APEKISPWLLRIELNREMMVDKKLSMADIA KIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKS KVNRFD +GFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+D EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
YLRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHEGMMSP +LSPN+RSSPITDAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>XP_010935180.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 2820 bits (7311), Expect = 0.0
Identities = 1401/1536 (91%), Positives = 1456/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH+ETMERGKPK GGLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETCMANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPK+RLKRIYD GD++D+Q QQD++EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
IDGMKM+AEYK KKKSD+QEQLPEPVERKQVL+AERVLSVLKRISDEDC LLGL P YA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSE+E+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI KAK+ V +LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK +FD V+KYEID+D+WNP+YMLPEHVEDLK IREFRNVF+AE QKLEADRY
Sbjct: 901 KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+DFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEVNK KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+APEKISPWLLRIELNREMMVDKKLSMADIA KIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDEAPKGELQDESAEDDVFLK+IESNMLTEMALRGIPDINKVFIKS KVNRFD +GFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+D EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1440
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
+LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSYMEGL+FGMTPSRSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLEFGMTPSRSPISGT 1500
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHEGMMSP +LSPN+RSSPITDAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>AIO05697.1 DNA-directed RNA polymerase II subunit 1, partial [Cocos nucifera]
Length = 1705
Score = 2817 bits (7302), Expect = 0.0
Identities = 1402/1536 (91%), Positives = 1454/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MDTRFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH+ETMERGKPK GGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETCMANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPK+RLKRIYD GD++D+Q QQD++EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
IDGMKM+AEYK KKKSD+QEQLPEPVERKQVL+AERVLSVLKRISDEDC LLGL+P YA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPLPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSE+E+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGXLLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI KAK+ V +LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EFD +KYEID+D+WNP+YMLPEHVEDLK IREFRNVF+AE QKLEADRY
Sbjct: 901 KLDSLKMKKSEFDKFFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGDN+WP+PVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+DFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
K EVNK KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KSEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+APEKISPWLLRIELNREMMVDKKLSMADIA KIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDE PKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKS KVNRFD DGFK
Sbjct: 1261 MNDEGPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENDGFK 1320
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+D EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVD LLDAAV+AE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDXLLDAAVFAETD 1440
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
+LRGVTENIMLGQL PIGTG C L LNDQMLQ AIELQLPSYMEGLDFGMTPSRSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQXAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHEGMMSP +LSPN+RSSPITDAQFSPYVGGM F
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMTF 1536
>XP_002285900.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2806 bits (7275), Expect = 0.0
Identities = 1398/1536 (91%), Positives = 1453/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKV+MVQFGILSPDEIRQMSVVQ+EH+ET ERGKPK GGLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETC ANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQA KIRNPKNRLK+I D GDE++ Q D+DEPVKKSRGGCGAQQP +T
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQ-ALDSDEPVKKSRGGCGAQQPKLT 179
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
I+GMKM+AEYK Q+KK+D+ EQLPEPVERKQ L+AERVL+VLKRISDEDC LLGL+P YA
Sbjct: 180 IEGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYA 239
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
SEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSESE+GF+TPGDTQV IE+ GSLIHVIWEEVGPDA
Sbjct: 600 NLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI KAK+ V +LI+ AQE+
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQ 719
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQ 899
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKKGEFD V+KYEID+++WNP+YMLPEHVEDLK IREFRNVF+AE QKLEADR+
Sbjct: 900 KLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRF 959
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 960 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1019
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1079
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KP+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FVKSYYEMPDEE
Sbjct: 1140 KPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1199
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
VAPEKISPWLLRIELNREMMVDKKLSMADIA KINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1200 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1259
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKS KVN+FD +GFK
Sbjct: 1260 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFK 1319
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+ EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1320 PEVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
+LRGVTENIMLGQL PIGTG C L LNDQMLQ AIELQLPSYMEGLDFGMTPSRSPI+GT
Sbjct: 1440 FLRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYMEGLDFGMTPSRSPITGT 1499
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYH+GMMSP +LSPN+R SPITDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>XP_010266907.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2806 bits (7274), Expect = 0.0
Identities = 1398/1536 (91%), Positives = 1453/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MDTRFPYSPAEV+KV+ VQFGILSPD IRQMSVVQ+EH+ET E+GKPK GGLSD+RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETCMANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQA +IRNPKNRLK++ D GDE+++Q Q DT EP+KK RGGCGAQQP +T
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQ-DTGEPIKKRRGGCGAQQPKLT 179
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
I+GMKM+AEYK Q+KK+D+QEQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+P YA
Sbjct: 180 IEGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYA 239
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSESE+GF+TPGDTQV IER GSLIHVIWEEVGPDA
Sbjct: 600 NLMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI KAK+ V +LI+ AQE+
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQ 719
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQ 899
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKM+K EFD V++YEID+++WNP+YMLPEHVEDLK IREFRNVF+AE QKLEADRY
Sbjct: 900 KLDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 959
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGDN+WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 960 QLGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1019
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+DFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1079
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FVKSYYEMPDEE
Sbjct: 1140 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEE 1199
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
VAPEKISPWLLRIELNREMMVDKKLSMADIA KINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1200 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1259
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKS KVN+FD +GFK
Sbjct: 1260 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFK 1319
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+ EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1320 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSYMEGLDFGMTPSRSPI GT
Sbjct: 1440 CLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIMGT 1499
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PY+EGMMSP +LSPN R SPITDAQFSPYVGGMAF
Sbjct: 1500 PYNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535
>XP_010941355.1 PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Elaeis
guineensis]
Length = 1842
Score = 2803 bits (7265), Expect = 0.0
Identities = 1390/1536 (90%), Positives = 1450/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKV+ VQFGILSPDEIRQMSV Q+EH ETMERGKPK GGLSD RLGTI
Sbjct: 1 MDVRFPYSPAEVAKVRCVQFGILSPDEIRQMSVAQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETCMANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPK+RLKRI D GD++D+Q QQD++EP+KKSRGGCG+QQP IT
Sbjct: 121 FKQALKIRNPKHRLKRISDACKSKKKCAGGDDVDIQAQQDSEEPIKKSRGGCGSQQPTIT 180
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
IDGMKMVAEYK KKKSD+Q+QLPEPVERKQ+L+A+RVLSVLKRISDEDC LLGL+P YA
Sbjct: 181 IDGMKMVAEYKAPKKKSDDQDQLPEPVERKQILSADRVLSVLKRISDEDCILLGLNPQYA 240
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIE DVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEMDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSE+E+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFS+GIGDTIADA TM+KINETI KAK+ V +LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSMGIGDTIADAVTMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EFD +++YEID+++WNP+YMLPEHVEDLK IREF+NVF+AE QKLEADRY
Sbjct: 901 KLDSLKMKKSEFDKIFRYEIDDNNWNPSYMLPEHVEDLKTIREFKNVFDAEVQKLEADRY 960
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEI TTGDN+WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIVTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+DFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEVNK KE AKNVQ ALEYTTLRSVT ATEVWYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQTALEYTTLRSVTHATEVWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+APEKISPWLLR+ELNREMMVDKKLSMADIA KIN EF D+TCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRVELNREMMVDKKLSMADIAEKINHEFGSDITCIFNDDNADKLILRIRI 1260
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDEAPKG+LQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKS KVNRFD +GFK
Sbjct: 1261 MNDEAPKGDLQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDETEGFK 1320
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+D EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVY+E D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYSEAD 1440
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
+LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1500
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHEGMMSP +LSPN+RSSPITDAQFSPYVGGMAF
Sbjct: 1501 PYHEGMMSPSYLLSPNVRSSPITDAQFSPYVGGMAF 1536
>XP_009401403.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Musa acuminata
subsp. malaccensis]
Length = 1832
Score = 2799 bits (7255), Expect = 0.0
Identities = 1395/1543 (90%), Positives = 1450/1543 (93%), Gaps = 9/1543 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MDTRFP+SPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH ETMERGKPK GLSD RLGTI
Sbjct: 1 MDTRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETMERGKPKPAGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETCMANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADEEDTR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEEDTR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPKNRLKRIYD GD++D+Q QQD++EP+KKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCSGGDDIDVQGQQDSEEPMKKSRGGCGAQQPNIT 180
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
IDGMKMVAEYK KKKSDEQEQLPEP ERKQ+L+AERVLSVLKRISDEDC LLGL+P YA
Sbjct: 181 IDGMKMVAEYKAPKKKSDEQEQLPEPAERKQILSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHL DGDFVLFNRQPSLHKMSIMGH+IKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLCDGDFVLFNRQPSLHKMSIMGHKIKIMPYS 480
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVIELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSESE+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 601 NLIRFSAWHSESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATM+KINETI KAK+ V DLIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQEKQ 720
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMM+SFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMDSFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE Q
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIEYQ 900
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
K DSLKMKKGEFD+V++YEID+D+WNP+Y+ PEHVEDLK IREFRNVF+AE QKLEADRY
Sbjct: 901 KFDSLKMKKGEFDSVFRYEIDDDNWNPSYLQPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGD S PMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDISIPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+DFLSMEAQKNATL FNILLRS+FASKRV+KEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLLFNILLRSSFASKRVMKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KP VNK KE AKNVQCALEYTTLRSVT ATE+WYDPDPMSTIIEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPGVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+APEKISPWLLRIELNREMMVDKKLSMADIA KIN EFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1260
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MND+APKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKS K+NRFD +GFK
Sbjct: 1261 MNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINRFDENEGFK 1320
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
D EWMLDTEGVNLLAVMCHED+DATRTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHEDIDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEGD 1440
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYME-------GLDFGMTPS 1352
+LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSYM+ G DFGMTPS
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMDGGFGGPGGFDFGMTPS 1500
Query: 1351 RSPISGTPYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
RSPISGTPYHEGMMSP +LSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1501 RSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1543
>XP_020113244.1 DNA-directed RNA polymerase II subunit 1 [Ananas comosus] OAY68410.1
DNA-directed RNA polymerase II subunit rpb1 [Ananas
comosus]
Length = 1854
Score = 2798 bits (7254), Expect = 0.0
Identities = 1387/1536 (90%), Positives = 1449/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFP+SPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH+ETMERGKPK GGLSD RLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETCMANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+DTR
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPKNRLKRIYD GD++D+Q QQDTDEPVKKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKRCAGGDDIDVQGQQDTDEPVKKSRGGCGAQQPNIT 180
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
+DGMKMVAE+K KKKSD+QEQLPEPVERKQ+L+AERVL+VLKRISDEDC LLGL+P YA
Sbjct: 181 VDGMKMVAEFKASKKKSDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYA 240
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDQHLELGYKVERHLQDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWH ESE+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHLESETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI KAK+ V +LIK AQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIKLAQEKQ 720
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EFD V+ YEID+ +WNP+YMLPEHV+DLK+I+EFRNVFEAE QKLEADR
Sbjct: 901 KLDSLKMKKSEFDNVFTYEIDDPNWNPSYMLPEHVDDLKSIKEFRNVFEAEVQKLEADRI 960
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGDN+WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 QLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +S+EAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPE+NK KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ T+IEEDVEFVKSYYEMPDE+
Sbjct: 1141 KPEINKKKEMAKNVQCALEYTTLRSVTHATEIWYDPDPLGTLIEEDVEFVKSYYEMPDED 1200
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+APEKISPWLLRIELNREMMVDKKLSMADIA KIN EFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNADKLILRIRI 1260
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDI+KVFIKS KVNRFD +GFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDIHKVFIKSGKVNRFDKSEGFK 1320
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
D EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1380
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1440
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
+LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSY+EGL+FGMTP+RSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGGCSLYLNDQMLQQAIELQLPSYIEGLEFGMTPARSPISGT 1500
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHE MMSP +SPN+RSSPITDAQFSPYVGGM F
Sbjct: 1501 PYHESMMSPSYFMSPNVRSSPITDAQFSPYVGGMVF 1536
>JAT62993.1 DNA-directed RNA polymerase II subunit RPB1, partial [Anthurium
amnicola]
Length = 1912
Score = 2794 bits (7244), Expect = 0.0
Identities = 1387/1544 (89%), Positives = 1453/1544 (94%), Gaps = 1/1544 (0%)
Frame = -3
Query: 5857 ALGT*SAAAMDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGG 5678
A G ++ AMD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH ET ERGKPKV G
Sbjct: 76 AAGIQNSVAMDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAG 135
Query: 5677 LSDSRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSK 5498
LSD RLGTIDRKMKC+TCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSK
Sbjct: 136 LSDPRLGTIDRKMKCDTCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSK 195
Query: 5497 ILADEEDTRFKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGG 5318
ILADEED RFKQALKIRNPK+RLKRIY+ GDE+D+Q QQD++EP+KK+RGG
Sbjct: 196 ILADEEDNRFKQALKIRNPKHRLKRIYEACKSKKKCAGGDEIDVQAQQDSEEPLKKNRGG 255
Query: 5317 CGAQQPNITIDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCF 5138
CGAQQPNITIDGMKMVAEYK KKK+D+QEQLPEPVERKQVL+AERVLSVLKRISDEDC
Sbjct: 256 CGAQQPNITIDGMKMVAEYKAAKKKNDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCL 315
Query: 5137 LLGLDPNYARPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQE 4958
LLGL+P YARPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLRRQE
Sbjct: 316 LLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLRRQE 375
Query: 4957 RNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNL 4778
RNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNL
Sbjct: 376 RNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNL 435
Query: 4777 MGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPP 4598
MGKRVDFSARTVITPDPTINID+LGVPWSIALNLT PETVTPYNIERLKELVEYGPHPPP
Sbjct: 436 MGKRVDFSARTVITPDPTINIDELGVPWSIALNLTIPETVTPYNIERLKELVEYGPHPPP 495
Query: 4597 GKTGAKYIIREDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMG 4418
GKTGAKYIIREDG RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMG
Sbjct: 496 GKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMG 555
Query: 4417 HRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSN 4238
HRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+N
Sbjct: 556 HRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQAN 615
Query: 4237 RPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV 4058
RPVMGIVQDTLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV
Sbjct: 616 RPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV 675
Query: 4057 FNLIIPKQINITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHV 3878
FNLIIPKQIN+ R +AWH E E GF+TPGDTQV IER GSLIHV
Sbjct: 676 FNLIIPKQINLIRYSAWHDEKEKGFITPGDTQVRIERGELLSGTLCKKTLGTSGGSLIHV 735
Query: 3877 IWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVND 3698
IWEEVGPDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI AK+AV D
Sbjct: 736 IWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKD 795
Query: 3697 LIKQAQEKALEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSK 3518
LIKQAQEK LEAEPGRTMMESFEN+VNQVLNKARD+AGSSAQ+SLSESNNLKAMVTAGSK
Sbjct: 796 LIKQAQEKQLEAEPGRTMMESFENKVNQVLNKARDEAGSSAQRSLSESNNLKAMVTAGSK 855
Query: 3517 GSFINISQMTACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQE 3338
GSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLTPQE
Sbjct: 856 GSFINISQMTACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQE 915
Query: 3337 FFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDG 3158
FFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDG
Sbjct: 916 FFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDG 975
Query: 3157 MDAVWIESQKLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAE 2978
MD+VWIE QKLD+LKM K EFD +++YEID+++WNP+YMLPEHVEDLK IREFRNVF+AE
Sbjct: 976 MDSVWIEGQKLDTLKMNKDEFDNLFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAE 1035
Query: 2977 FQKLEADRYQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVD 2798
QKL+ADRYQLGTEIATTGD SWP+PVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVD
Sbjct: 1036 VQKLDADRYQLGTEIATTGDVSWPLPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVD 1095
Query: 2797 KLQERLKVVPGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIES 2618
KLQERLKVVPG+D +SMEAQKNATLFFNILLR TFASKRVLKEYRLTREAFEWVIGEIES
Sbjct: 1096 KLQERLKVVPGDDMMSMEAQKNATLFFNILLRGTFASKRVLKEYRLTREAFEWVIGEIES 1155
Query: 2617 RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKI 2438
RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKI
Sbjct: 1156 RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKI 1215
Query: 2437 KTPSLSVYLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVK 2258
KTPSLSV+LKPEVN TKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFV+
Sbjct: 1216 KTPSLSVFLKPEVNLTKEQAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVR 1275
Query: 2257 SYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNA 2078
SYYEMPDEEV+PEKISPWLLRIELNREMMVDKKLSMA+IA KINLEFDDDLTCIFNDDNA
Sbjct: 1276 SYYEMPDEEVSPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNA 1335
Query: 2077 EKLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVN 1898
+KLILRIRIMND+APKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK VKVN
Sbjct: 1336 DKLILRIRIMNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKPVKVN 1395
Query: 1897 RFDSVDGFKSDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLD 1718
RFD +GFK+ EW LDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRR+LLD
Sbjct: 1396 RFDENEGFKTINEWALDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLD 1455
Query: 1717 ELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILL 1538
ELR VISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILL
Sbjct: 1456 ELRAVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILL 1515
Query: 1537 DAAVYAEKDYLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMT 1358
DAAVYAE D+LRGVTENI+LGQL PIGTG C L LNDQML+QAIELQLPSYMEGLD+GMT
Sbjct: 1516 DAAVYAEADHLRGVTENIILGQLAPIGTGACALYLNDQMLKQAIELQLPSYMEGLDYGMT 1575
Query: 1357 PSRSPISGTPYHEGMMSPML-SPNIRSSPITDAQFSPYVGGMAF 1229
PSRSPI+GTPYHEGMMSP L SPN+R+SPITDAQFSPYV GM+F
Sbjct: 1576 PSRSPITGTPYHEGMMSPYLYSPNVRASPITDAQFSPYVSGMSF 1619
>JAT40747.1 DNA-directed RNA polymerase II subunit RPB1, partial [Anthurium
amnicola]
Length = 1732
Score = 2794 bits (7244), Expect = 0.0
Identities = 1387/1544 (89%), Positives = 1453/1544 (94%), Gaps = 1/1544 (0%)
Frame = -3
Query: 5857 ALGT*SAAAMDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGG 5678
A G ++ AMD RFPYSPAEVAKV+ VQFGILSPDEIRQMSVVQ+EH ET ERGKPKV G
Sbjct: 76 AAGIQNSVAMDMRFPYSPAEVAKVRTVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAG 135
Query: 5677 LSDSRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSK 5498
LSD RLGTIDRKMKC+TCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSK
Sbjct: 136 LSDPRLGTIDRKMKCDTCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSK 195
Query: 5497 ILADEEDTRFKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGG 5318
ILADEED RFKQALKIRNPK+RLKRIY+ GDE+D+Q QQD++EP+KK+RGG
Sbjct: 196 ILADEEDNRFKQALKIRNPKHRLKRIYEACKSKKKCAGGDEIDVQAQQDSEEPLKKNRGG 255
Query: 5317 CGAQQPNITIDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCF 5138
CGAQQPNITIDGMKMVAEYK KKK+D+QEQLPEPVERKQVL+AERVLSVLKRISDEDC
Sbjct: 256 CGAQQPNITIDGMKMVAEYKAAKKKNDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCL 315
Query: 5137 LLGLDPNYARPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQE 4958
LLGL+P YARPDWMILQVL PSVMMDTSSRSEDDLTHQLAM+IRHNENLRRQE
Sbjct: 316 LLGLNPKYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLRRQE 375
Query: 4957 RNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNL 4778
RNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNL
Sbjct: 376 RNGAPAHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNL 435
Query: 4777 MGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPP 4598
MGKRVDFSARTVITPDPTINID+LGVPWSIALNLT PETVTPYNIERLKELVEYGPHPPP
Sbjct: 436 MGKRVDFSARTVITPDPTINIDELGVPWSIALNLTIPETVTPYNIERLKELVEYGPHPPP 495
Query: 4597 GKTGAKYIIREDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMG 4418
GKTGAKYIIREDG RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMG
Sbjct: 496 GKTGAKYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMG 555
Query: 4417 HRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSN 4238
HRI+IMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+N
Sbjct: 556 HRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQAN 615
Query: 4237 RPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV 4058
RPVMGIVQDTLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV
Sbjct: 616 RPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQV 675
Query: 4057 FNLIIPKQINITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHV 3878
FNLIIPKQIN+ R +AWH E E GF+TPGDTQV IER GSLIHV
Sbjct: 676 FNLIIPKQINLIRYSAWHDEKEKGFITPGDTQVRIERGELLSGTLCKKTLGTSGGSLIHV 735
Query: 3877 IWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVND 3698
IWEEVGPDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI AK+AV D
Sbjct: 736 IWEEVGPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKD 795
Query: 3697 LIKQAQEKALEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSK 3518
LIKQAQEK LEAEPGRTMMESFEN+VNQVLNKARD+AGSSAQ+SLSESNNLKAMVTAGSK
Sbjct: 796 LIKQAQEKQLEAEPGRTMMESFENKVNQVLNKARDEAGSSAQRSLSESNNLKAMVTAGSK 855
Query: 3517 GSFINISQMTACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQE 3338
GSFINISQMTACVGQQNVEGKRIP+GF+ RTLPHFTKDDYGPESRGFVENSYLRGLTPQE
Sbjct: 856 GSFINISQMTACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQE 915
Query: 3337 FFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDG 3158
FFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDG
Sbjct: 916 FFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDG 975
Query: 3157 MDAVWIESQKLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAE 2978
MD+VWIE QKLD+LKM K EFD +++YEID+++WNP+YMLPEHVEDLK IREFRNVF+AE
Sbjct: 976 MDSVWIEGQKLDTLKMNKDEFDNLFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAE 1035
Query: 2977 FQKLEADRYQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVD 2798
QKL+ADRYQLGTEIATTGD SWP+PVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVD
Sbjct: 1036 VQKLDADRYQLGTEIATTGDVSWPLPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVD 1095
Query: 2797 KLQERLKVVPGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIES 2618
KLQERLKVVPG+D +SMEAQKNATLFFNILLR TFASKRVLKEYRLTREAFEWVIGEIES
Sbjct: 1096 KLQERLKVVPGDDMMSMEAQKNATLFFNILLRGTFASKRVLKEYRLTREAFEWVIGEIES 1155
Query: 2617 RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKI 2438
RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKI
Sbjct: 1156 RFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKI 1215
Query: 2437 KTPSLSVYLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVK 2258
KTPSLSV+LKPEVN TKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFV+
Sbjct: 1216 KTPSLSVFLKPEVNLTKEQAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVR 1275
Query: 2257 SYYEMPDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNA 2078
SYYEMPDEEV+PEKISPWLLRIELNREMMVDKKLSMA+IA KINLEFDDDLTCIFNDDNA
Sbjct: 1276 SYYEMPDEEVSPEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNA 1335
Query: 2077 EKLILRIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVN 1898
+KLILRIRIMND+APKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK VKVN
Sbjct: 1336 DKLILRIRIMNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKPVKVN 1395
Query: 1897 RFDSVDGFKSDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLD 1718
RFD +GFK+ EW LDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRR+LLD
Sbjct: 1396 RFDENEGFKTINEWALDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLD 1455
Query: 1717 ELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILL 1538
ELR VISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILL
Sbjct: 1456 ELRAVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILL 1515
Query: 1537 DAAVYAEKDYLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMT 1358
DAAVYAE D+LRGVTENI+LGQL PIGTG C L LNDQML+QAIELQLPSYMEGLD+GMT
Sbjct: 1516 DAAVYAEADHLRGVTENIILGQLAPIGTGACALYLNDQMLKQAIELQLPSYMEGLDYGMT 1575
Query: 1357 PSRSPISGTPYHEGMMSPML-SPNIRSSPITDAQFSPYVGGMAF 1229
PSRSPI+GTPYHEGMMSP L SPN+R+SPITDAQFSPYV GM+F
Sbjct: 1576 PSRSPITGTPYHEGMMSPYLYSPNVRASPITDAQFSPYVSGMSF 1619
>KMZ69245.1 DNA-directed RNA polymerase [Zostera marina]
Length = 1841
Score = 2794 bits (7244), Expect = 0.0
Identities = 1394/1537 (90%), Positives = 1448/1537 (94%), Gaps = 3/1537 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MDTRFPYSP+EV+KVQMVQFGI+ PDEIRQMSVV +EH ETMERGKPK GLSD LGTI
Sbjct: 1 MDTRFPYSPSEVSKVQMVQFGIIGPDEIRQMSVVLIEHGETMERGKPKPAGLSDPLLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRK+KCETCMANMAECPGHFGHLELAKPM+HIGF+KTVLAIMRCVCFNCSKILADE+DTR
Sbjct: 61 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPK+RLKRIYD GD++D+Q+Q D++EPVKKSR GCGAQQPNIT
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKSKKTCAVGDDIDVQDQGDSEEPVKKSRTGCGAQQPNIT 180
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
IDGMKMVAEYK QKKK+D+Q+QLPEPVERKQVL+AE+VLSVLKRISD+DC LLGLDP YA
Sbjct: 181 IDGMKMVAEYKAQKKKNDDQDQLPEPVERKQVLSAEKVLSVLKRISDDDCLLLGLDPKYA 240
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVT+PYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 481 TFRLNLSVTAPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 540
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSESESGF+TPGDTQV IER GSLIHVIWEEVGPDA
Sbjct: 601 NLIRYSAWHSESESGFITPGDTQVRIERGEILSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADA TM+KINETI AK+AV DLIKQAQEK
Sbjct: 661 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAGTMEKINETISNAKNAVKDLIKQAQEKQ 720
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTM ESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMTESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFTDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EF+ VY+YEI +D+WNP YM EHVEDLK I EFRNVF+AE QKLEADRY
Sbjct: 901 KLDSLKMKKAEFNNVYRYEIYDDNWNPGYMQSEHVEDLKNIPEFRNVFDAEVQKLEADRY 960
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEI TTGDNSWPMPVNL+RL+WNAQKTF VD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 QLGTEITTTGDNSWPMPVNLRRLVWNAQKTFNVDFRRPSDMHPMEIVEAVDKLQERLKVV 1020
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KP VNKTKE+AKNVQCALEYTTLRSVT+ATEVWYDPDP ST+IEEDVEFVKSYYEMPDEE
Sbjct: 1141 KPGVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPTSTLIEEDVEFVKSYYEMPDEE 1200
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
VAPEKISPWLLRIELNREMMVDKKLSMADIA KINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MND+APKGELQDE+AEDDVFLKKIESNMLTEMALRGIPDINKVFIKS K+N+FD ++GFK
Sbjct: 1261 MNDDAPKGELQDEAAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDELEGFK 1320
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
D EWMLDTEGVNLLAVMCH+DVDATRTTSNHLIE+IEV+GIEAVR+SLLDELRVVISFD
Sbjct: 1321 PDVEWMLDTEGVNLLAVMCHDDVDATRTTSNHLIEVIEVIGIEAVRKSLLDELRVVISFD 1380
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1440
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
YLRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSYMEGLDFGMTPS SPIS
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGSCALYLNDQMLQQAIELQLPSYMEGLDFGMTPSHSPIS-- 1498
Query: 1330 PYH-EGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
P H +GMMSP +LSPNIRSSPITDAQFSPYVGGMAF
Sbjct: 1499 PGHLDGMMSPNYLLSPNIRSSPITDAQFSPYVGGMAF 1535
>XP_006659128.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza
brachyantha]
Length = 1855
Score = 2789 bits (7230), Expect = 0.0
Identities = 1380/1536 (89%), Positives = 1450/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKVQ+VQFGILSPDEIRQMSVVQ+EHAETMERGKPK GGLSD RLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRK+KCETCMA MAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKILADE+DT+
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPKNRLKRIYD GD+LD+Q QQDTDEPVK+ RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKR-RGGCGAQQPNIT 179
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
+DGMKMVAE+K KKK+D+QEQLPEPVERKQ+L+AERVL+VLKRISDEDC LLGL+P +A
Sbjct: 180 VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDT IEKDVFMNILMWWEDFDGK+PAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 599
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSE+E+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI AK+ V +LIKQA +K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISTAKNEVKELIKQAHDKH 719
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKKGEFDTV++YE+D+++W PNYMLPEHVEDLK IREFRNVFEAE QKLEADR+
Sbjct: 900 KLDSLKMKKGEFDTVFRYELDDENWRPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRF 959
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGDN+WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 960 QLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1019
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +S+EAQKNATLFFNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEVNK KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDVEFV+SYYEMPDE+
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
V P+KISPWLLRIELNREMMVDKKLSMADIA KIN EFDDDL+CIFNDDNA+KLILR+RI
Sbjct: 1200 VDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRI 1259
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
NDEAPKGE+QDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK KVN+F+ DGFK
Sbjct: 1260 TNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNDGFK 1319
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
D EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1320 PDNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
YLRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSY+EGLDFGMTP+RSPISGT
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGT 1499
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHEGMMSP +LSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535
>ONK55404.1 uncharacterized protein A4U43_UnF3880 [Asparagus officinalis]
Length = 1843
Score = 2788 bits (7227), Expect = 0.0
Identities = 1390/1536 (90%), Positives = 1443/1536 (93%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFP+SPAEVAKV+ VQFGILSPDEIRQMSVVQVEH ETMERGKPKV GLSD RLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRTVQFGILSPDEIRQMSVVQVEHGETMERGKPKVAGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETC ANMAECPGHFGHLELAKPM+HIGFMKTVLAIMRCVCFNCSKILADE+D R
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLAIMRCVCFNCSKILADEDDVR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPKNRLKRIYD GD++D+Q QQD+DEPVKKSRGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKKCAGGDDIDVQGQQDSDEPVKKSRGGCGAQQPNIT 180
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
IDGMKMVAEYK KKKSD+ EQLPEPVERKQ L+AERVLSVLKRISDEDC LLGL+P YA
Sbjct: 181 IDGMKMVAEYKATKKKSDDPEQLPEPVERKQQLSAERVLSVLKRISDEDCLLLGLNPKYA 240
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N++R +AWHSESE+GF+TPGDTQV IE+ GSLIHVIWEEVGPDA
Sbjct: 601 NLSRASAWHSESETGFITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ FSIGIGDTIADAATM+KINETI KAK+ V DLIK AQ+K
Sbjct: 661 ARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNDVKDLIKLAQDKQ 720
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LE EPGRTMMESFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+ RTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EF+ VY+YEID++ W+P+YMLPEHVEDLK I EFRNVF+AE QKLEADR+
Sbjct: 901 KLDSLKMKKKEFNNVYRYEIDDNQWDPSYMLPEHVEDLKTIPEFRNVFDAEVQKLEADRF 960
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGT+IATTGDN+WPMPVNLKRLIWNAQKTFKVD RRPSDMHPMEIVEAVDKLQE+L+VV
Sbjct: 961 QLGTDIATTGDNTWPMPVNLKRLIWNAQKTFKVDPRRPSDMHPMEIVEAVDKLQEKLRVV 1020
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+DFLSMEAQKNATL FNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLLFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1140
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPE++K KE AKNVQCALEYTTLRSVT ATEVWYDP+PMSTIIEEDV+FV SYYEMPDEE
Sbjct: 1141 KPEISKKKELAKNVQCALEYTTLRSVTHATEVWYDPNPMSTIIEEDVDFVNSYYEMPDEE 1200
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
VAPEKISPWLLRIELNREMMVDKKLSMADIA KIN EFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MND+APKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKS KVNRFD +GFK
Sbjct: 1261 MNDDAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
D EW LDTEGVNLLAVMCHEDVD TRTTSNHLIE+IEVLGIEAVR+SLLDELRVVISFD
Sbjct: 1321 PDVEWTLDTEGVNLLAVMCHEDVDPTRTTSNHLIEVIEVLGIEAVRKSLLDELRVVISFD 1380
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEAD 1440
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
+LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSYMEGLDFGMTP+RSPISGT
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYMEGLDFGMTPARSPISGT 1500
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHEG+MSP +LSPNIRSSP TDAQFSPYV M F
Sbjct: 1501 PYHEGIMSPSYLLSPNIRSSPFTDAQFSPYVNNMPF 1536
>XP_015649819.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Oryza sativa
Japonica Group]
Length = 1855
Score = 2779 bits (7205), Expect = 0.0
Identities = 1375/1536 (89%), Positives = 1448/1536 (94%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKVQ+VQFGILSPDEIRQMSVVQ+EHAETMERGKPK GGLSD RLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
D+K+KCETCMA MAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKILADE+DT+
Sbjct: 61 DQKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPKNRLKRIYD GD+LD+Q QQDTDEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
+DGMKMVAE+K KKK+D+QEQLPEPVERKQ+L+AERVL+VLKRISDEDC LLGL+P +A
Sbjct: 180 VDGMKMVAEFKAPKKKNDDQEQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDT IEKDVFMNILMWWEDFDGK+PAPAILKPRP+WTGKQVFNLIIPK I
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILKPRPIWTGKQVFNLIIPKPI 599
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSE+E+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSEAETGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM KINETI KAKD V +LI QA +K
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMVKINETISKAKDDVKELIMQAHDKQ 719
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDI+VKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIIVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKKGEFD V++YE+D+++W PNYMLPEHV+DLK IREFRNVFEAE QKLEADR+
Sbjct: 900 KLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLG+EIATTGDN+WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 960 QLGSEIATTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1019
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +S+EAQKNATLFFNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEVNK KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDVEFV+SYYEMPDE+
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+ P+KISPWLLRIELNREMMVDKKLSMADIA KIN EFDDDL+CIFNDDNA+KLILR+RI
Sbjct: 1200 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRI 1259
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
NDEAPKGE+QDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK KVN+F+ GFK
Sbjct: 1260 TNDEAPKGEIQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKYGKVNKFEDNVGFK 1319
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+D EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFD
Sbjct: 1320 ADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFD 1379
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
YLRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSY+EGLDFGMTP+RSPISGT
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGT 1499
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHEGMMSP +LSPNIR+SPITDAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1535
>XP_004972809.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Setaria italica]
KQL00756.1 hypothetical protein SETIT_013115mg [Setaria
italica]
Length = 1852
Score = 2776 bits (7197), Expect = 0.0
Identities = 1374/1537 (89%), Positives = 1447/1537 (94%), Gaps = 3/1537 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKVQ+VQFGILSPDEIRQMSV+Q+EHAETMERGKPK GGLSD RLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRK+KCETCMA MAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKILADE+DT+
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPKNRLKRIYD GD+LD+Q QQDTDEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
+DGMKMVAE+K KKK+D+Q+QLPEPVERKQ+L+AERVL+VLKRISDEDC LLGL+P +A
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDT IEKDVFMN LMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSE+E+GF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDA 659
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATM+KINETI KAK+ V +LIKQAQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAQDKH 719
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKKGEFD V++YE+D+++W PNYMLPEHV+DLK IREFRNVFEAE QKLEADR+
Sbjct: 900 KLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEI TTGDNSWPMPVNLKRLIWNAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 960 QLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVV 1019
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +S+EAQKNATLFFNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEVNK KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDVEFV+SYYEMPDE+
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+ P+KISPWLLRIELNREMM+DKKLSMADIA KIN EFDDDL+CIFNDDNA+KLILRIRI
Sbjct: 1200 IDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRI 1259
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
ND+APKGE+QDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK KVN+FD +GFK
Sbjct: 1260 TNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGFK 1319
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+D EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1320 ADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAEAD 1439
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSY+EGLDFGMTP+RSPISGT
Sbjct: 1440 LLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGT 1499
Query: 1330 PYHEGMMSP--MLSPNIRSSPI-TDAQFSPYVGGMAF 1229
PYHEGMMSP +LSPNIR+SPI TDA FSPYVG MAF
Sbjct: 1500 PYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1536
>XP_017252141.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
subsp. sativus]
Length = 1843
Score = 2760 bits (7154), Expect = 0.0
Identities = 1365/1536 (88%), Positives = 1443/1536 (93%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFP+SPAEVAKV+MVQFGILSPDEIRQMSVV +EH ET ERGKPK GLSD RLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETCMANMAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQA KIRNPKNRLK+I D GDE++ Q+Q DTDEP+KKSRGGCGAQQP IT
Sbjct: 121 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIESQSQ-DTDEPLKKSRGGCGAQQPKIT 179
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
I+GMKM+AEYK QKKK+D+ EQLPEPVERKQ L+AERVL+VLKRISDEDC LLGL+P YA
Sbjct: 180 IEGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCMLLGLNPKYA 239
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 299
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
SEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 539
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQI 599
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWH++ E+G +TPGDTQV IE+ GSLIHVIWEEVGPDA
Sbjct: 600 NLMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDA 659
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATM+KINETI AK+AV +LI+ AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKD 719
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LE EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EFD V++YEID+ +WNP+YMLP+HVEDLK IREFRNVF+AE QKLEADR+
Sbjct: 900 KLDSLKMKKNEFDKVFRYEIDDGNWNPSYMLPDHVEDLKTIREFRNVFDAEVQKLEADRF 959
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEI TTGDN+WPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 960 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 1019
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +SMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAP 1079
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KP V+ +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMSTII+EDV+FVKSYYEMPDEE
Sbjct: 1140 KPNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVKSYYEMPDEE 1199
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+ P+KISPWLLR++LNREMM+DKKLSMADIA KINLEFDDDLTCIFNDDNA+KLILRIRI
Sbjct: 1200 IDPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRI 1259
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K NRFD +GF
Sbjct: 1260 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFV 1319
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
++ EWMLDTEGVNLLAV+CHE+VDA RTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1320 TEPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
YLRGVTENIMLGQL PIGTG C L LN++ML+QAI++QLPSYM+GLDFGMTP+RSPISGT
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGDCSLYLNEKMLKQAIDIQLPSYMDGLDFGMTPARSPISGT 1499
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYH+GMMSP MLSPN+R SPITDAQFSPYVGGM F
Sbjct: 1500 PYHDGMMSPNYMLSPNLRLSPITDAQFSPYVGGMGF 1535
>XP_006828844.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Amborella
trichopoda] ERM96260.1 hypothetical protein
AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 2757 bits (7146), Expect = 0.0
Identities = 1372/1537 (89%), Positives = 1445/1537 (94%), Gaps = 3/1537 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKV++VQFGILSP+EIR MSVV+++H+ETMERGKPK GLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKC+TC ANMAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCS+ILADEED R
Sbjct: 61 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSR-GGCGAQQPNI 5294
FKQALKIRNPK RLK++ D GD++D QD++E VKK R GGCGAQQP I
Sbjct: 121 FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180
Query: 5293 TIDGMKMVAEYKTQKKKSDEQEQ-LPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPN 5117
TI+GMKMVAEYK +KK+DEQEQ LPEPVERKQ L AE+VL+VLKRI+DEDC LLGL+P
Sbjct: 181 TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240
Query: 5116 YARPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAH 4937
YARPDWMILQV+ PSVMMDTSSRSEDDLTHQLAM+IRHNENL+RQE+NGAPAH
Sbjct: 241 YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300
Query: 4936 IISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 4757
IISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 301 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360
Query: 4756 SARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 4577
SARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY
Sbjct: 361 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420
Query: 4576 IIREDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 4397
IIREDG RLDLRYLKKS DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 421 IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480
Query: 4396 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 4217
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV
Sbjct: 481 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540
Query: 4216 QDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 4037
QDTLLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK
Sbjct: 541 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600
Query: 4036 QINITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGP 3857
QIN+ R +AWHSESESGF+TPGDT V IER GSLIHVIWEEVGP
Sbjct: 601 QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660
Query: 3856 DAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQE 3677
DAARKFLGHTQWLVNYWLLQQ FSIGIGDTIADAATM+KINETI KAK+ V +LIK AQE
Sbjct: 661 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720
Query: 3676 KALEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 3497
K LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 721 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780
Query: 3496 QMTACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 3317
QMTACVGQQNVEGKRIP+GF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 781 QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840
Query: 3316 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 3137
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 841 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 900
Query: 3136 SQKLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEAD 2957
SQKLDSLKMK+ EF+ VYKYEID+++W+P+YMLPEHVEDLK IREF+NVF+AE QKLEAD
Sbjct: 901 SQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEAD 960
Query: 2956 RYQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLK 2777
R+QLGTEI TTGDNSWPMPVNLKRLIWNAQK FKVDLRRPSDMHPMEIVEAVDKLQERLK
Sbjct: 961 RHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLK 1020
Query: 2776 VVPGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLV 2597
VVPG+D +S+EAQKNATLFFNILLRSTFASKRVLKEYRLTREAF+WVIGEIESRFLQSLV
Sbjct: 1021 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1080
Query: 2596 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 2417
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1081 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1140
Query: 2416 YLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPD 2237
YLK EVNKTKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPMSTIIEEDV+FV+SYYEMPD
Sbjct: 1141 YLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1200
Query: 2236 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRI 2057
EEVAPEKISPWLLRIELNREMMVDKKLSMADIA KINLEFDDDLTCIFNDDNAEKLILRI
Sbjct: 1201 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1260
Query: 2056 RIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDG 1877
RIMNDEAPKGELQDES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKS K+N+FD +G
Sbjct: 1261 RIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEG 1320
Query: 1876 FKSDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVIS 1697
FK + EWMLDTEGVNLLAVMC+E+VDATRTTSNHLIE+I+VLGIEAVRR+LLDELRVVIS
Sbjct: 1321 FKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVIS 1380
Query: 1696 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1517
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE
Sbjct: 1381 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE 1440
Query: 1516 KDYLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPIS 1337
D+LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSYMEG+DFGMTPSRSP++
Sbjct: 1441 ADHLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYMEGMDFGMTPSRSPMT 1500
Query: 1336 GTPYHEGMMSP-MLSPNIRSSPITDAQFSPYVGGMAF 1229
GTPYHEGMMSP +LSPN+RSSPITDAQFSPYVGGMAF
Sbjct: 1501 GTPYHEGMMSPYLLSPNMRSSPITDAQFSPYVGGMAF 1537
>XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit 1, partial [Juglans
regia]
Length = 1671
Score = 2756 bits (7145), Expect = 0.0
Identities = 1366/1536 (88%), Positives = 1438/1536 (93%), Gaps = 2/1536 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKV+MVQFGILSPDEIRQMSVVQ+EH+ETMERGKPK+ GLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETMERGKPKIAGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRKMKCETC ANMAECPGHFGHLELAKPM+HIGFMKTVL+IMRCVCFNCSKILADEED +
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKI+NPKNRLK+I D GDEL++Q Q D++EPVKKSRGGCGAQQP +T
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDELEVQGQ-DSEEPVKKSRGGCGAQQPKLT 179
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
I+GMKM+AEYK Q+KKSD+QEQLPEPVERKQ LTAERVL+VLKRISDEDC LLGL+P YA
Sbjct: 180 IEGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLNVLKRISDEDCQLLGLNPKYA 239
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 299
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
SEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 SEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
R+DG RLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 RDDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDT I KDVFMNILMWWEDFDGKIPAPAILKP P WTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTLISKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQVFNLIIPKQI 599
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+TR +AWH ESE+GF+TPGDTQV IER GSLIHVIWEEVGPDA
Sbjct: 600 NLTRTSAWHLESETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGH QWLVNYWLLQ GFSIGIGDTIADAATM+ INETI KAK+ V +LI++AQ +
Sbjct: 660 ARKFLGHVQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRKAQARE 719
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LE EPGRTMM+SFEN+VNQ LN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMDSFENKVNQTLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIPYGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ 899
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
+LDSLKMKK EF+ V++YE D++ WNP+YM+ EH+EDLK IREFRNVF+AE QKLEADRY
Sbjct: 900 RLDSLKMKKTEFERVFRYEFDDEQWNPDYMMQEHIEDLKTIREFRNVFDAEVQKLEADRY 959
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLG EIATTGDNSWP+PVNLKRLIWNAQK FK+D RR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 960 QLGAEIATTGDNSWPLPVNLKRLIWNAQKIFKIDPRRHSDMHPMEIVEAVDKLQERLKVV 1019
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PGED LS+EAQKNATLFF+ILLRSTFASKRVL+EY+LTREAFEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGEDLLSVEAQKNATLFFSILLRSTFASKRVLEEYKLTREAFEWVIGEIESRFLQSLVAP 1079
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYL 1139
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEV +TKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDV+FV+SYYEMPDEE
Sbjct: 1140 KPEVCRTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVRSYYEMPDEE 1199
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
VAPEKISPWLLRIELNREMMVDKKLSMADIA KINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1200 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1259
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K+N+FD DGFK
Sbjct: 1260 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQCKINKFDENDGFK 1319
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+ EWMLDTEGVNLLAVMCHEDVD+ RTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1320 PEQEWMLDTEGVNLLAVMCHEDVDSRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1439
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
YLRGVTENIMLGQL PIGTG C L LND+ML+ AIELQLPSYM+GLDFGMTPS SP+SGT
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMDGLDFGMTPSHSPVSGT 1499
Query: 1330 PYHEGMMSP--MLSPNIRSSPITDAQFSPYVGGMAF 1229
PYHEG+MSP +LSPN+R SPITDAQFSPYVGGMAF
Sbjct: 1500 PYHEGLMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>XP_020186028.1 DNA-directed RNA polymerase II subunit 1-like [Aegilops tauschii
subsp. tauschii]
Length = 1852
Score = 2755 bits (7141), Expect = 0.0
Identities = 1362/1535 (88%), Positives = 1440/1535 (93%), Gaps = 1/1535 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKV++VQFGILSPDEIRQMSVV +EHAETMERGK K GGLSD RLGTI
Sbjct: 1 MDARFPYSPAEVAKVKLVQFGILSPDEIRQMSVVVIEHAETMERGKAKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRK+KC+TCMA MAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKILADEEDT+
Sbjct: 61 DRKIKCDTCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEEDTK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPKNRL+RIYD GDEL++Q+QQD DEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLRRIYDACKSKKICAGGDELEVQDQQDADEPVKK-RGGCGAQQPNIT 179
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
+DGMKMVAE+K KKKSD+Q+QLPEPVERKQ+L+AERVL+VLKRISDEDC LLGL+P YA
Sbjct: 180 VDGMKMVAEFKATKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYA 239
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDP INIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 360 RTVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQD 539
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDT IEKDVFMNILMWWEDFDGK+PAPAIL+PRP+WTGKQVFNLIIPK I
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNILMWWEDFDGKVPAPAILRPRPIWTGKQVFNLIIPKLI 599
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWH+E+ESGF+TPGDT V IE+ GSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHAETESGFITPGDTMVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 659
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATM+KINETI AK+ V +LIKQAQEK
Sbjct: 660 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETIGTAKNEVKELIKQAQEKN 719
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIP+GFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EFD V++YE+D+++W P YMLP+HV+DLK IREFRNVFEAE QKLEADR
Sbjct: 900 KLDSLKMKKAEFDNVFRYELDDENWRPTYMLPDHVDDLKTIREFRNVFEAEVQKLEADRL 959
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEI TTGDN+WPMPVNLKRLIWNAQKTFK+DLRRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 960 QLGTEITTTGDNTWPMPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1019
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +S+EAQKNATLFFNILLRSTFASKRVLKEYRLT+E+FEWVIGEIESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKESFEWVIGEIESRFLQSLVAP 1079
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+L
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFL 1139
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEV+K KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEEDVEFV+SYYEMPDE+
Sbjct: 1140 KPEVSKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+ P+KISPWLLRIELNREMMVDKKLSMADIA KIN EFDDDL+CIFNDDNA+KLILR+RI
Sbjct: 1200 IDPDKISPWLLRIELNREMMVDKKLSMADIAEKINHEFDDDLSCIFNDDNADKLILRVRI 1259
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
NDEAPKGE+QDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK KVN+FD +GFK
Sbjct: 1260 TNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKYGKVNKFDESEGFK 1319
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
D EWMLDTEGVNLLAVMCHEDVD+TRTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1320 PDNEWMLDTEGVNLLAVMCHEDVDSTRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1439
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
YLRGVTENIMLGQL PIGTG CGL LNDQMLQQAIELQLPSY+EGLD+GMTP+RSP+S T
Sbjct: 1440 YLRGVTENIMLGQLAPIGTGGCGLYLNDQMLQQAIELQLPSYVEGLDYGMTPARSPMSAT 1499
Query: 1330 PYHE-GMMSPMLSPNIRSSPITDAQFSPYVGGMAF 1229
PY + GMMSPMLSPN R+SPITDAQFSPYVGGMAF
Sbjct: 1500 PYRDGGMMSPMLSPNFRASPITDAQFSPYVGGMAF 1534
>XP_002443877.1 hypothetical protein SORBIDRAFT_07g003680 [Sorghum bicolor]
EES13372.1 hypothetical protein SORBI_007G044100 [Sorghum
bicolor]
Length = 1857
Score = 2754 bits (7140), Expect = 0.0
Identities = 1368/1537 (89%), Positives = 1439/1537 (93%), Gaps = 3/1537 (0%)
Frame = -3
Query: 5830 MDTRFPYSPAEVAKVQMVQFGILSPDEIRQMSVVQVEHAETMERGKPKVGGLSDSRLGTI 5651
MD RFPYSPAEVAKV++VQFGILSPDEIRQMSVVQ+EHAETMERGKPK GGLSD RLGTI
Sbjct: 1 MDARFPYSPAEVAKVELVQFGILSPDEIRQMSVVQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 5650 DRKMKCETCMANMAECPGHFGHLELAKPMYHIGFMKTVLAIMRCVCFNCSKILADEEDTR 5471
DRK+KCETCMA MAECPGHFGHLELAKPM+HIGF+KTVL+IMRCVCFNCSKILADE++T+
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDETK 120
Query: 5470 FKQALKIRNPKNRLKRIYDXXXXXXXXXXGDELDLQNQQDTDEPVKKSRGGCGAQQPNIT 5291
FKQALKIRNPKNRLKRIYD GD+LD+Q +QDTDEPVKK RGGCGAQQPNIT
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQ-EQDTDEPVKK-RGGCGAQQPNIT 178
Query: 5290 IDGMKMVAEYKTQKKKSDEQEQLPEPVERKQVLTAERVLSVLKRISDEDCFLLGLDPNYA 5111
+DGMKMVAE+K KKKSD+Q+QLPEPVERKQ+L+AERVL+VLKRISDEDC LLGL+P YA
Sbjct: 179 VDGMKMVAEFKAPKKKSDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKYA 238
Query: 5110 RPDWMILQVLXXXXXXXXPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 4931
RPDWMILQVL PSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII
Sbjct: 239 RPDWMILQVLPVPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 298
Query: 4930 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 4751
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 299 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 358
Query: 4750 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 4571
RTVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 359 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 418
Query: 4570 REDGTRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 4391
REDG RLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 419 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 478
Query: 4390 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 4211
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 479 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 538
Query: 4210 TLLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 4031
TLLGCRK+TKRDT IEKDVFMNILMWW+DFDGKIPAPAILKPRP+WTGKQVFNLIIPKQI
Sbjct: 539 TLLGCRKITKRDTLIEKDVFMNILMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 598
Query: 4030 NITRIAAWHSESESGFMTPGDTQVLIERXXXXXXXXXXXXXXXXXGSLIHVIWEEVGPDA 3851
N+ R +AWHSE E GF+TPGDT V IE+ GSLIH+IWEEVGPDA
Sbjct: 599 NLIRFSAWHSEEEKGFITPGDTMVRIEKGELLSGTLCKKSLGTGTGSLIHIIWEEVGPDA 658
Query: 3850 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMDKINETILKAKDAVNDLIKQAQEKA 3671
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADA+TM IN+TI KAKD V +LIK+A EK
Sbjct: 659 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMQTINDTICKAKDEVKELIKKAHEKQ 718
Query: 3670 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 3491
LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 719 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 778
Query: 3490 TACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 3311
TACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 779 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 838
Query: 3310 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 3131
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 839 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 898
Query: 3130 KLDSLKMKKGEFDTVYKYEIDEDDWNPNYMLPEHVEDLKAIREFRNVFEAEFQKLEADRY 2951
KLDSLKMKK EFD +++YE+D+++W PNYMLPEHV+DLK IREFRNVFEAE QKLEADRY
Sbjct: 899 KLDSLKMKKPEFDNLFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRY 958
Query: 2950 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVV 2771
QLGTEIATTGDNSWPMPVNLKRLIWNAQKTF++D RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 959 QLGTEIATTGDNSWPMPVNLKRLIWNAQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVV 1018
Query: 2770 PGEDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 2591
PG+D +S+EAQKNATLFFNILLRSTFASKRVLKEYRLT+EAFEWVIGEIESRFLQSLVAP
Sbjct: 1019 PGDDPMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1078
Query: 2590 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 2411
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1079 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1138
Query: 2410 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEE 2231
KPEVN+ KE AKNVQCALEYTTLRSVT ATE+WYDPDP+ TIIEED EFV+SYYEMPDE+
Sbjct: 1139 KPEVNQKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDAEFVQSYYEMPDED 1198
Query: 2230 VAPEKISPWLLRIELNREMMVDKKLSMADIAGKINLEFDDDLTCIFNDDNAEKLILRIRI 2051
+ P+KISPWLLRIELNREMMVDKKLSMADIA KIN EFDDDL+CIFNDDNA+KLILRIRI
Sbjct: 1199 IDPDKISPWLLRIELNREMMVDKKLSMADIADKINREFDDDLSCIFNDDNADKLILRIRI 1258
Query: 2050 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSVKVNRFDSVDGFK 1871
NDEAPKGE+QDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK KVN F +GFK
Sbjct: 1259 TNDEAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKEGKVNTFYQDEGFK 1318
Query: 1870 SDTEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFD 1691
+ EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1319 AANEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1378
Query: 1690 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEKD 1511
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAE D
Sbjct: 1379 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESD 1438
Query: 1510 YLRGVTENIMLGQLGPIGTGCCGLLLNDQMLQQAIELQLPSYMEGLDFGMTPSRSPISGT 1331
+LRGVTENIMLGQL PIGTG C L LNDQMLQQAIELQLPSY+EGLDFGMTP+RSPISGT
Sbjct: 1439 HLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYVEGLDFGMTPARSPISGT 1498
Query: 1330 PYHEGMMSP--MLSPNIRSSPI-TDAQFSPYVGGMAF 1229
PYHEGMMSP +LSPNIR+SPI TDA FSPYVG MAF
Sbjct: 1499 PYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMAF 1535