BLASTX nr result
ID: Alisma22_contig00002288
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00002288
(3648 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010275189.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 502 e-162
XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Popu... 493 e-159
XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Po... 493 e-159
XP_010266387.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 492 e-158
OAY70832.1 RNA polymerase sigma factor sigA [Ananas comosus] 489 e-157
XP_020114871.1 RNA polymerase sigma factor sigA isoform X1 [Anan... 488 e-157
XP_020114873.1 RNA polymerase sigma factor sigA isoform X3 [Anan... 484 e-156
XP_002319237.2 hypothetical protein POPTR_0013s07290g [Populus t... 481 e-154
XP_008808794.1 PREDICTED: RNA polymerase sigma factor sigA [Phoe... 480 e-154
OAY41811.1 hypothetical protein MANES_09G130800 [Manihot esculen... 480 e-154
XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 479 e-153
OAY44539.1 hypothetical protein MANES_08G159000 [Manihot esculenta] 479 e-153
XP_017630518.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 478 e-153
XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 478 e-153
XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Rici... 478 e-153
EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus c... 477 e-153
EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao] 476 e-152
XP_017630520.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 475 e-152
XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isofo... 475 e-152
XP_011011636.1 PREDICTED: RNA polymerase sigma factor sigA-like ... 475 e-152
>XP_010275189.1 PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
XP_010275190.1 PREDICTED: RNA polymerase sigma factor
sigA-like [Nelumbo nucifera] XP_010275191.1 PREDICTED:
RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
Length = 516
Score = 502 bits (1293), Expect = e-162
Identities = 262/480 (54%), Positives = 344/480 (71%), Gaps = 3/480 (0%)
Frame = -1
Query: 1758 MAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGPN 1579
MA AAVIGL AGK LLS++FY S++ DR+ +V DHG Y + P + +IA+K S+F +
Sbjct: 11 MATAAVIGLNAGKRLLSSTFYYSDVTDRLASVYDHGLAQYQTAPSKSVVIAKKSSNFDHD 70
Query: 1578 YPPGQQKQFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSMLEK 1399
+ + Q ++A KE LN+ + ST D W D LQKS+LEK
Sbjct: 71 FASNRHNQSIKALKEHLNTFST-STEDMWLQTSDHLEEGNSDLDYSLEALLLLQKSLLEK 129
Query: 1398 QWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLH---RRRKQ 1228
QW LS +K+ R+ + P +E K +V RSG+SARQRR R + N + + RRR
Sbjct: 130 QWNLSFEKSMRKGA-PKEETRKKIQVTRSGVSARQRRTNTRKKYLNTDSSMMQTTRRRHL 188
Query: 1227 VSTISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEPS 1048
S +S +L Q++ K Y++G + + +L+H EV+ L +K+K+G+SLE+HK RL+ +LG EPS
Sbjct: 189 GSMVSEELLQSRLKGYVKGVISEELLTHSEVVQLSKKIKVGISLEEHKMRLKERLGCEPS 248
Query: 1047 DRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXXX 868
D +LA+ LRISR+EL +MIECSLAREK+AMSN+RLVMSIA KYDN+GA+M
Sbjct: 249 DEQLATSLRISRAELQMKMIECSLAREKIAMSNVRLVMSIAHKYDNMGAEMADLVQGGLI 308
Query: 867 XXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTKL 688
GIEK+DSSKG KISTYVYWWIRQG+S+ +VENSRTLR+PSH+ RL IR AK +L
Sbjct: 309 GLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHMHERLSLIRNAKIRL 368
Query: 687 EDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADPH 508
E++GI+P+IDRIA+ LN+SQ+KVRNATEA+++V+SLDRE FPSL+G P ET HSY+AD
Sbjct: 369 EEKGITPSIDRIAECLNISQKKVRNATEAVNKVISLDREAFPSLNGLPGETLHSYIADNR 428
Query: 507 LENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISMER 328
+ENNPWHG EW LKDEVNNLL+TTL ERERDIIRLY+GLD+E LTWE+I R+ +S ER
Sbjct: 429 IENNPWHGVDEWSLKDEVNNLLNTTLRERERDIIRLYYGLDEECLTWEDISRRIGLSRER 488
>XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
XP_011012458.1 PREDICTED: RNA polymerase sigma factor
sigA [Populus euphratica]
Length = 509
Score = 493 bits (1268), Expect = e-159
Identities = 255/482 (52%), Positives = 341/482 (70%), Gaps = 4/482 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+ GK LLS+SFY S+L +++ +V DHG + + ++A+K S++GP
Sbjct: 1 MMATAAVIGLSTGKRLLSSSFYYSDLTEKLSSVNDHGITYCPTATTKNVVVAKKSSNYGP 60
Query: 1581 NYPPGQQKQF-LRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
N+P + ++A KE +++++ +S +WF +D LQKSML
Sbjct: 61 NFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRR---R 1234
EKQW LS ++T +S +NN K V SG+SARQRR R +N NQ+ ++ + +
Sbjct: 121 EKQWNLSFERTNSSDSTS-KKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFK 179
Query: 1233 KQVSTISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYE 1054
S ISP L QN+ K Y++G V D VL H EV+ L + ++ GLS E HK RL+ +LG E
Sbjct: 180 FLRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCE 239
Query: 1053 PSDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXX 874
PSD ++A LRISR++L ++I+CSLAREKLAMSN+RLVMSIAQKYDN+GA+M
Sbjct: 240 PSDEQIADSLRISRADLQAKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGG 299
Query: 873 XXXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKT 694
GIEK+DSSKG+KISTYVYWWIRQG+S+ +V+NSRTLR+P+HL RL IR AK
Sbjct: 300 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKI 359
Query: 693 KLEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVAD 514
+LE++G++P+IDRIA+ LNMSQRKVRNATEAIS+V SLDRE FPSL+G P ET+HSY+AD
Sbjct: 360 RLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 419
Query: 513 PHLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISM 334
ENNPWHG EW LK+EVN L+D+TL ERE++IIRLYHGLD+E LTWE+I ++ +S
Sbjct: 420 NRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSR 479
Query: 333 ER 328
ER
Sbjct: 480 ER 481
>XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
EEF00264.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein
[Populus trichocarpa]
Length = 509
Score = 493 bits (1268), Expect = e-159
Identities = 255/482 (52%), Positives = 342/482 (70%), Gaps = 4/482 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL++GK LLS+SFY S+L +++ V DHG Y + + I+A+K S++GP
Sbjct: 1 MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGP 60
Query: 1581 NYPPGQQKQF-LRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
++P + ++A KE +++++ +S +WF +D LQKSML
Sbjct: 61 SFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRR---R 1234
EKQW LS ++T +S +NN K V SG+SARQRR R +N NQ+ ++ + +
Sbjct: 121 EKQWNLSFERTNSSDSTS-KKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFK 179
Query: 1233 KQVSTISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYE 1054
S SP L QN+ K Y++G V D VL H EV+ L + ++ GLS E HK RL+ +LG E
Sbjct: 180 FLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCE 239
Query: 1053 PSDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXX 874
PSD ++A LRISR++L +++I+CSLAREKLAMSN+RLVMSIAQKYDN+GA+M
Sbjct: 240 PSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGG 299
Query: 873 XXXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKT 694
GIEK+DSSKG+KISTYVYWWIRQG+S+ +V+NSRTLR+P+HL RL IR AK
Sbjct: 300 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKI 359
Query: 693 KLEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVAD 514
+LE++G++P+IDRIA+ LNMSQRKVRNATEAIS+V SLDRE FPSL+G P ET+HSY+AD
Sbjct: 360 RLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 419
Query: 513 PHLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISM 334
ENNPWHG EW LK+EVN L+D+TL ERE++IIRLYHGLD+E LTWE+I ++ +S
Sbjct: 420 NRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSR 479
Query: 333 ER 328
ER
Sbjct: 480 ER 481
>XP_010266387.1 PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
Length = 506
Score = 492 bits (1267), Expect = e-158
Identities = 262/480 (54%), Positives = 343/480 (71%), Gaps = 3/480 (0%)
Frame = -1
Query: 1758 MAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGPN 1579
MA AAVIGL+AGK LL+++FY S++ DR+L+V DHG Y + + IIA+K S+FG +
Sbjct: 1 MATAAVIGLSAGKRLLNSTFYYSDVTDRLLSVYDHGLAQYQATSAKNVIIARKSSNFGDS 60
Query: 1578 YPPGQQKQFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSMLEK 1399
+P Q Q +RA KE +N+ + ST D W LQK +LEK
Sbjct: 61 FPSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVDALLLLQKFLLEK 120
Query: 1398 QWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHR--RRKQV 1225
QW LS ++T + P +E + K +V RSG+SARQRR + R + + + +RKQ+
Sbjct: 121 QWNLSFEQT-ITDGAPGEETHKKIQVTRSGVSARQRRTSTRRTCLSPKHSIMQPTKRKQL 179
Query: 1224 -STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEPS 1048
S +SP+L ++ Y++G + + +L+H EV+ L +K+K GLSLE+HK RL+ +LG +PS
Sbjct: 180 GSMVSPELLKSHY-GYVKGVISEELLTHAEVVQLSKKIKAGLSLEEHKLRLKERLGCDPS 238
Query: 1047 DRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXXX 868
D +LAS LRISR+EL +++IECSLAREKL MSN+RLVMSIAQKYDN+GA+M
Sbjct: 239 DEQLASSLRISRAELQSKVIECSLAREKLTMSNVRLVMSIAQKYDNMGAEMADLVQGGLI 298
Query: 867 XXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTKL 688
GIEK+DSSKG+KISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR AK +L
Sbjct: 299 GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLCLIRNAKIRL 358
Query: 687 EDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADPH 508
++GI+P+IDRIA+ LNMS++KVRNATEA+++V SLDRE FPSL+G P ET HSY+AD
Sbjct: 359 AEKGITPSIDRIAECLNMSEKKVRNATEAVNKVFSLDREAFPSLNGLPRETLHSYIADNR 418
Query: 507 LENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISMER 328
LENNPWHG EW LKDEVNNLL TTL ERERDIIRLY+GLDKE LTWE+I R+ +S ER
Sbjct: 419 LENNPWHGVDEWSLKDEVNNLLSTTLEERERDIIRLYYGLDKECLTWEDISRRIGLSRER 478
>OAY70832.1 RNA polymerase sigma factor sigA [Ananas comosus]
Length = 501
Score = 489 bits (1259), Expect = e-157
Identities = 260/478 (54%), Positives = 344/478 (71%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+AG LLSTSFY S+L +++ V DHG +SS + IIAQK +FGP
Sbjct: 1 MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAIIAQKSPNFGP 60
Query: 1581 NYPPGQQKQFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSMLE 1402
N +Q + ++A KE +S+ STT++W + LQKSMLE
Sbjct: 61 NASSNRQMRAIKALKEHAHSAAT-STTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLE 119
Query: 1401 KQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRRRKQVS 1222
KQW L D+ + + P ++NN K EV RSG+SARQRR R R + L+R ++ S
Sbjct: 120 KQWELPFDQM-KTFTEPAEKNN-KVEVTRSGVSARQRRTDTRRRFSIMP--LNRGKQIRS 175
Query: 1221 TISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEPSDR 1042
T+SP+L Q +++ Y++G V + +L+H EV+NL +K+K GL LE+H+ +L+ KLG EPSD+
Sbjct: 176 TVSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLEEHRAKLKEKLGTEPSDK 235
Query: 1041 ELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXXXXX 862
+LA LR+SR+EL++R+ ECS AREKLAMSNIRLV+SIAQKYDNLGA+M
Sbjct: 236 QLACSLRMSRAELHSRLFECSQAREKLAMSNIRLVISIAQKYDNLGAEMADLIQGGLIGL 295
Query: 861 XXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTKLED 682
GIEK+DSSKG+KISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR AK +LED
Sbjct: 296 LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLED 355
Query: 681 RGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADPHLE 502
+GI+P+ID++A+ LNMSQ+KVRNATEA+++V+SLDRE FPSL+G P ET HSY+AD +LE
Sbjct: 356 KGITPSIDKLAESLNMSQKKVRNATEAVNKVLSLDREAFPSLNGLPGETLHSYIADRNLE 415
Query: 501 NNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISMER 328
NNPWHG+ EW +KDEVN LL L +RERDI++LYHGL E+ TWE+I RQ +S ER
Sbjct: 416 NNPWHGFEEWSVKDEVNKLLHLALNKRERDIVQLYHGLGGESRTWEDISRQFGLSRER 473
>XP_020114871.1 RNA polymerase sigma factor sigA isoform X1 [Ananas comosus]
Length = 501
Score = 488 bits (1255), Expect = e-157
Identities = 259/478 (54%), Positives = 344/478 (71%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+AG LLSTSFY S+L +++ V DHG +SS + IIAQK +FGP
Sbjct: 1 MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAIIAQKSPNFGP 60
Query: 1581 NYPPGQQKQFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSMLE 1402
N +Q + ++A KE +S+ STT++W + LQKSMLE
Sbjct: 61 NASSNRQMRAIKALKEHAHSAAT-STTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLE 119
Query: 1401 KQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRRRKQVS 1222
KQW L D+ + + P ++NN K EV RSG+SARQRR R R + L+R ++ S
Sbjct: 120 KQWELPFDQM-KTFTEPAEKNN-KVEVTRSGVSARQRRTDTRRRFSIMP--LNRGKQIRS 175
Query: 1221 TISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEPSDR 1042
T+SP+L Q +++ Y++G V + +L+H EV+NL +K+K GL L++H+ +L+ KLG EPSD+
Sbjct: 176 TVSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLKEHRAKLKEKLGTEPSDK 235
Query: 1041 ELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXXXXX 862
+LA LR+SR+EL++R+ ECS AREKLAMSNIRLV+SIAQKYDNLGA+M
Sbjct: 236 QLACSLRMSRAELHSRLFECSQAREKLAMSNIRLVISIAQKYDNLGAEMADLIQGGLIGL 295
Query: 861 XXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTKLED 682
GIEK+DSSKG+KISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR AK +LED
Sbjct: 296 LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLED 355
Query: 681 RGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADPHLE 502
+GI+P+ID++A+ LNMSQ+KVRNATEA+++V+SLDRE FPSL+G P ET HSY+AD +LE
Sbjct: 356 KGITPSIDKLAESLNMSQKKVRNATEAVNKVLSLDREAFPSLNGLPGETLHSYIADRNLE 415
Query: 501 NNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISMER 328
NNPWHG+ EW +KDEVN LL L +RERDI++LYHGL E+ TWE+I RQ +S ER
Sbjct: 416 NNPWHGFEEWSVKDEVNKLLHLALNKRERDIVQLYHGLGGESRTWEDISRQFGLSRER 473
>XP_020114873.1 RNA polymerase sigma factor sigA isoform X3 [Ananas comosus]
Length = 466
Score = 484 bits (1247), Expect = e-156
Identities = 256/471 (54%), Positives = 340/471 (72%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+AG LLSTSFY S+L +++ V DHG +SS + IIAQK +FGP
Sbjct: 1 MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAIIAQKSPNFGP 60
Query: 1581 NYPPGQQKQFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSMLE 1402
N +Q + ++A KE +S+ STT++W + LQKSMLE
Sbjct: 61 NASSNRQMRAIKALKEHAHSAAT-STTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLE 119
Query: 1401 KQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRRRKQVS 1222
KQW L D+ + + P ++NN K EV RSG+SARQRR R R + L+R ++ S
Sbjct: 120 KQWELPFDQM-KTFTEPAEKNN-KVEVTRSGVSARQRRTDTRRRFSIMP--LNRGKQIRS 175
Query: 1221 TISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEPSDR 1042
T+SP+L Q +++ Y++G V + +L+H EV+NL +K+K GL L++H+ +L+ KLG EPSD+
Sbjct: 176 TVSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLKEHRAKLKEKLGTEPSDK 235
Query: 1041 ELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXXXXX 862
+LA LR+SR+EL++R+ ECS AREKLAMSNIRLV+SIAQKYDNLGA+M
Sbjct: 236 QLACSLRMSRAELHSRLFECSQAREKLAMSNIRLVISIAQKYDNLGAEMADLIQGGLIGL 295
Query: 861 XXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTKLED 682
GIEK+DSSKG+KISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR AK +LED
Sbjct: 296 LRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLED 355
Query: 681 RGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADPHLE 502
+GI+P+ID++A+ LNMSQ+KVRNATEA+++V+SLDRE FPSL+G P ET HSY+AD +LE
Sbjct: 356 KGITPSIDKLAESLNMSQKKVRNATEAVNKVLSLDREAFPSLNGLPGETLHSYIADRNLE 415
Query: 501 NNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ 349
NNPWHG+ EW +KDEVN LL L +RERDI++LYHGL E+ TWE+I RQ
Sbjct: 416 NNPWHGFEEWSVKDEVNKLLHLALNKRERDIVQLYHGLGGESRTWEDISRQ 466
>XP_002319237.2 hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
EEE95160.2 hypothetical protein POPTR_0013s07290g
[Populus trichocarpa]
Length = 499
Score = 481 bits (1239), Expect = e-154
Identities = 255/479 (53%), Positives = 332/479 (69%), Gaps = 1/479 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA A+ IGLT GK LLS+SFY S+L +++ V DHG Y + I+A+K S +GP
Sbjct: 1 MMATASFIGLTTGKRLLSSSFYFSDLTEKLSNVNDHGVAHYQITTTKSVIVAKKSSKYGP 60
Query: 1581 NYPPGQQKQFL-RACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
++P + +A KE +++++ +ST +WF D LQKSML
Sbjct: 61 SFPSSYRNPHSNKALKELIDTASASSTVATWFKTLDDFEEESSVLDYSVEALILLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRRRKQV 1225
EKQW LS + +S I ++N K V SG+SARQRR + +N NQ+ ++
Sbjct: 121 EKQWNLSFESINSSDSK-IKKSNKKIPVTCSGVSARQRRLNNKRKNQNQSKFM------- 172
Query: 1224 STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEPSD 1045
S ISP L N+ K Y++G V D VL H EV+ L + ++ GLSLE HK L+ +LG EPSD
Sbjct: 173 SDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSLEDHKSSLKERLGCEPSD 232
Query: 1044 RELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXXXX 865
+LA LRISR++L +++I+CSLAREKLAMSN+RLVMSIAQK DN+GA+M
Sbjct: 233 EQLADSLRISRADLQSQLIQCSLAREKLAMSNVRLVMSIAQKNDNMGAEMADLVQAGLIG 292
Query: 864 XXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTKLE 685
GIEK+DSSKG+KISTYVYWWIRQG+S+ +VEN RTLR+P+HL RL IR AK +LE
Sbjct: 293 LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIRLE 352
Query: 684 DRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADPHL 505
++G++P+IDRIA+ LNMSQRKVRNATEAIS+V SLDRE FPSL+G P ET+HSY+AD L
Sbjct: 353 EKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRL 412
Query: 504 ENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISMER 328
ENNPWHG EW LK+EVN L+D+ L ERER+IIRLYHGLDKE LTWE+I ++ +S ER
Sbjct: 413 ENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSRER 471
>XP_008808794.1 PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
XP_008808795.1 PREDICTED: RNA polymerase sigma factor
sigA [Phoenix dactylifera] XP_008808796.1 PREDICTED: RNA
polymerase sigma factor sigA [Phoenix dactylifera]
XP_008808797.1 PREDICTED: RNA polymerase sigma factor
sigA [Phoenix dactylifera]
Length = 508
Score = 480 bits (1235), Expect = e-154
Identities = 251/483 (51%), Positives = 339/483 (70%), Gaps = 6/483 (1%)
Frame = -1
Query: 1758 MAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGPN 1579
MA AAVIGL+ GK LLSTSFY ++L +++ V DHGS +S+ + I A++ S+FG N
Sbjct: 1 MATAAVIGLSTGKRLLSTSFYPADLAEKLFAVPDHGSMQFSTSSTKNTIAAKRSSNFGTN 60
Query: 1578 YPPGQQKQFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSMLEK 1399
P + Q ++A KE ++++ + ST D+WF D LQKSMLEK
Sbjct: 61 IPSNRHSQAIKALKEHVDTAAL-STADAWFRRPDPLEDGESDLEYSLEVLILLQKSMLEK 119
Query: 1398 QWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLH------RR 1237
QW+L ++ + + E+ K EV+RSG+SAR+RR R R N++ Y+
Sbjct: 120 QWKLPFEQI--KTVDDPRESCKKTEVIRSGISARKRRTVTRRRCFNRSAYMEPFNGGEEG 177
Query: 1236 RKQVSTISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGY 1057
++ ST+SP+L Q + + Y+RG V + +L+H EV++L +K++ GLSLE+ + +L+ KLG+
Sbjct: 178 KELRSTVSPELLQTRVRGYVRGTVSENLLTHAEVVHLSRKIRAGLSLEEKRMKLKEKLGF 237
Query: 1056 EPSDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXX 877
EPSD++LAS+LR+S +EL++++ ECSLAREKLAMSN+RLVMSIAQKYDNLGA+M
Sbjct: 238 EPSDKQLASFLRMSHAELHSKLTECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLIQG 297
Query: 876 XXXXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAK 697
GIEK+DSSKG KISTYVYWWIRQG+S+ +VENSRTLR+PSHL RL IR AK
Sbjct: 298 GLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAK 357
Query: 696 TKLEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVA 517
+LED+G+ P+ID IA+ LNMS +KV+NATEA+S+V SLDRE FPSL+G P ET HSY+A
Sbjct: 358 IRLEDKGVMPSIDNIAESLNMSPKKVKNATEAVSKVFSLDREAFPSLNGLPGETLHSYIA 417
Query: 516 DPHLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VIS 337
D +L N PWHG+ +W LKDEVN LL TL +RER IIRLY+G+ E TWE+I RQ +S
Sbjct: 418 DKNLANIPWHGFEDWSLKDEVNKLLHATLSKRERAIIRLYYGIGNETHTWEDISRQFGLS 477
Query: 336 MER 328
ER
Sbjct: 478 RER 480
>OAY41811.1 hypothetical protein MANES_09G130800 [Manihot esculenta] OAY41812.1
hypothetical protein MANES_09G130800 [Manihot esculenta]
Length = 509
Score = 480 bits (1235), Expect = e-154
Identities = 257/482 (53%), Positives = 340/482 (70%), Gaps = 4/482 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+M AAVIGL+AGK LLS+SFY S+L D++ V DHG Y + I A+K S++GP
Sbjct: 1 MMTTAAVIGLSAGKRLLSSSFYYSDLTDKLFNVNDHGLTHYQIASTKNVIGAKKSSNYGP 60
Query: 1581 NYPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
YP + Q ++A KE +++++ +STT++ F + LQKSML
Sbjct: 61 TYPSSNRNTQSIKALKEHVDTASSSSTTETRFKTFHDIEEDISDLDYSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRRR--K 1231
EKQW LS ++T +S ++ K V SGLSARQRR R +N QN + K
Sbjct: 121 EKQWNLSFERTASSDSTN-RKSEKKIPVTCSGLSARQRRINTRRKNLGQNKATVQASTFK 179
Query: 1230 QV-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYE 1054
Q+ S +SP+L QN+ K Y++G V + +L+H EV+ L + +K GLSLE HK RL+ +LG E
Sbjct: 180 QLQSAVSPELLQNRLKGYVKGVVSEELLTHAEVVRLSRIIKAGLSLEDHKSRLKERLGCE 239
Query: 1053 PSDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXX 874
PSD +LA+ LRISR+EL +++I CSLAREKLAMSN+RLVMSIAQ+YD++GA+M
Sbjct: 240 PSDEQLATSLRISRAELQSKLIACSLAREKLAMSNVRLVMSIAQRYDHMGAEMADLVQGG 299
Query: 873 XXXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKT 694
GIEK+DSSKG+KISTYVYWWIRQG+S+ +V+NSRTLR+P+HL RL IR AK
Sbjct: 300 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKI 359
Query: 693 KLEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVAD 514
+LE++G++P+IDRIA+ L MSQ+KVRNATEAIS+V SLDRE FPSL+G P ET+HSY+AD
Sbjct: 360 RLEEKGVTPSIDRIAESLKMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 419
Query: 513 PHLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISM 334
L+NNPWH EW LKDEVN L+D TL ERER+IIRLY+GLD E+LTWE+I ++ +S
Sbjct: 420 NCLDNNPWHVVDEWALKDEVNRLIDLTLREREREIIRLYYGLDNESLTWEDISKRIGLSR 479
Query: 333 ER 328
ER
Sbjct: 480 ER 481
>XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
[Gossypium raimondii] KJB44350.1 hypothetical protein
B456_007G247500 [Gossypium raimondii]
Length = 508
Score = 479 bits (1233), Expect = e-153
Identities = 255/481 (53%), Positives = 341/481 (70%), Gaps = 3/481 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+ GK LLS+SF SE D++ D+GS Y + + ++A++ S+
Sbjct: 1 MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLMVAKRSSNCSQ 60
Query: 1581 NYPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
N P + Q ++A KE +++++ ST + W + LQKSML
Sbjct: 61 NLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQN-DYLHRRRKQ 1228
EKQW LS ++T S P + ++K V SG+SARQRR + + + +QN + KQ
Sbjct: 121 EKQWTLSFERTMFTES-PSRKTHNKVPVTCSGVSARQRRFSTKRKILSQNKSMIQPNAKQ 179
Query: 1227 V-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEP 1051
+ S I P+L QN+ K Y++G V + +LSH EV+ L +K+K GLSLE+H+ RL+ +LG EP
Sbjct: 180 LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGCEP 239
Query: 1050 SDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXX 871
SD +LA+ L++SR+EL +R IECSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299
Query: 870 XXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTK 691
GIEK+DSSKGYKISTYVYWWIRQG+S+ +VENSRTLR+P++L RL IR AK +
Sbjct: 300 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359
Query: 690 LEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADP 511
LE++GI+PTIDRIA+ LNMSQ+KVRNATEA+S+V SLDR+ FPSL+G P ET+HSY+AD
Sbjct: 360 LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419
Query: 510 HLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISME 331
H+ENNPWHG EW LKDEVN L++ TL ERER+IIRLYHGLDKE+LTWE+I ++ +S E
Sbjct: 420 HVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479
Query: 330 R 328
R
Sbjct: 480 R 480
>OAY44539.1 hypothetical protein MANES_08G159000 [Manihot esculenta]
Length = 508
Score = 479 bits (1232), Expect = e-153
Identities = 251/481 (52%), Positives = 343/481 (71%), Gaps = 4/481 (0%)
Frame = -1
Query: 1758 MAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGPN 1579
MA AAVIGL++GK LLS++FY S+L ++ V DHG Y + I A+K S++GP
Sbjct: 1 MATAAVIGLSSGKRLLSSTFYYSDLTEKPFNVYDHGLTYYQIASTKNGIAAKKSSNYGPR 60
Query: 1578 YPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSMLE 1402
+P + + ++A KE +++++ +ST +W ++ LQKS+LE
Sbjct: 61 FPSSNRNTRSIKALKEHVDAASASSTAVTWSKTFNDIEEDSSDLDYSVEALLLLQKSLLE 120
Query: 1401 KQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRR---RK 1231
KQW LS ++T +S+ I+ + K V SGLSAR+RR R + +Q+ + + +
Sbjct: 121 KQWNLSFERTISSDSSSIN-SQKKIPVTCSGLSARKRRVNTRRKTLSQSKSIVQASTFKH 179
Query: 1230 QVSTISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEP 1051
S +SP+L QN+ K Y++G V + +L+H EV++L + +K GLS+E+HK RL+ +LG EP
Sbjct: 180 LKSAVSPELLQNRLKGYVKGVVSEELLTHKEVVHLSKIIKAGLSMEEHKSRLKERLGCEP 239
Query: 1050 SDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXX 871
SD++LA+ LRISR+EL +++I CSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 SDKQLATSLRISRTELQSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 299
Query: 870 XXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTK 691
GIEK+DSSKG+KISTYVYWWIRQG+SK +VENSRTLR+P+HL RL IR AK +
Sbjct: 300 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRIAKIR 359
Query: 690 LEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADP 511
LED+G++P+IDRIA+ LN+SQ+KVRNATEAIS+V SLDRE FPSL+G P ET+HSY+AD
Sbjct: 360 LEDKGVTPSIDRIAESLNISQKKVRNATEAISKVFSLDREAFPSLNGFPGETHHSYIADN 419
Query: 510 HLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISME 331
+ENNPWHG EW LKDEVN L+D+TL ERER+IIRLYHGL E LTWE+I ++ +S E
Sbjct: 420 CIENNPWHGVDEWALKDEVNKLIDSTLREREREIIRLYHGLGNECLTWEDISKRIGLSRE 479
Query: 330 R 328
R
Sbjct: 480 R 480
>XP_017630518.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Gossypium arboreum] XP_017630519.1 PREDICTED: RNA
polymerase sigma factor sigA-like isoform X1 [Gossypium
arboreum] KHG03684.1 RNA polymerase sigma factor rpoD
[Gossypium arboreum] KHG18047.1 RNA polymerase sigma
factor rpoD [Gossypium arboreum]
Length = 508
Score = 478 bits (1231), Expect = e-153
Identities = 257/481 (53%), Positives = 338/481 (70%), Gaps = 3/481 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+ GK LLS+SF SE D++ D+GS Y + + I+A++ S+
Sbjct: 1 MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLIVAKRSSNCSQ 60
Query: 1581 NYPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
N P + Q ++A K +++++ ST + W + LQKSML
Sbjct: 61 NLPSSNRHTQLIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQN-DYLHRRRKQ 1228
EKQW LS ++T S P + +SK V SG+SARQRR + + +QN + KQ
Sbjct: 121 EKQWTLSFERTMFIES-PSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPNAKQ 179
Query: 1227 V-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEP 1051
+ S I P+L QN+ K Y++G V + +LSH EV+ L +K+K GLSLE+H RL+ +LG EP
Sbjct: 180 LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCEP 239
Query: 1050 SDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXX 871
SD +LA+ L++SR+EL +R IECSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299
Query: 870 XXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTK 691
GIEK+DSSKGYKISTYVYWWIRQG+S+ +VENSRTLR+P++L RL IR AK +
Sbjct: 300 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359
Query: 690 LEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADP 511
LE++GI+PTIDRIA+ LNMSQ+KVRNATEA+S+V SLDR+ FPSL+G P ET+HSY+AD
Sbjct: 360 LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419
Query: 510 HLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISME 331
H+ENNPWHG EW LKDEVN L+D TL ERER+IIRLYHGLDKE+LTWE+I ++ +S E
Sbjct: 420 HVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479
Query: 330 R 328
R
Sbjct: 480 R 480
>XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like [Gossypium hirsutum]
XP_016671617.1 PREDICTED: RNA polymerase sigma factor
sigA-like [Gossypium hirsutum]
Length = 508
Score = 478 bits (1229), Expect = e-153
Identities = 257/481 (53%), Positives = 338/481 (70%), Gaps = 3/481 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+ GK LLS+SF SE D++ D+GS Y + + I+A++ S+
Sbjct: 1 MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLIVAKRSSNCSQ 60
Query: 1581 NYPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
N P + Q ++A K +++++ ST + W + LQKSML
Sbjct: 61 NLPSSNRHTQSIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQN-DYLHRRRKQ 1228
EKQW LS ++T S P + +SK V SG+SARQRR + + +QN + KQ
Sbjct: 121 EKQWTLSFERTMFIES-PSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPNAKQ 179
Query: 1227 V-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEP 1051
+ S I P+L QN+ K Y++G V + +LSH EV+ L +K+K GLSLE+H RL+ +LG EP
Sbjct: 180 LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCEP 239
Query: 1050 SDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXX 871
SD +LA+ L++SR+EL +R IECSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299
Query: 870 XXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTK 691
GIEK+DSSKGYKISTYVYWWIRQG+S+ +VENSRTLR+P++L RL IR AK +
Sbjct: 300 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359
Query: 690 LEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADP 511
LE++GI+PTIDRIA+ LNMSQ+KVRNATEA+S+V SLDR+ FPSL+G P ET+HSY+AD
Sbjct: 360 LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419
Query: 510 HLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISME 331
H+ENNPWHG EW LKDEVN L+D TL ERER+IIRLYHGLDKE+LTWE+I ++ +S E
Sbjct: 420 HVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479
Query: 330 R 328
R
Sbjct: 480 R 480
>XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Ricinus communis]
Length = 509
Score = 478 bits (1229), Expect = e-153
Identities = 249/482 (51%), Positives = 346/482 (71%), Gaps = 4/482 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+AGK LLS++FY S+L +++ + +HG Y + I+A+K S++GP
Sbjct: 1 MMATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGP 60
Query: 1581 NYPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
++P + Q ++A KE +++++ ST + F ++ LQKSML
Sbjct: 61 SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRRR--K 1231
EKQW LS ++T +S P ++ K V SG+SARQRR IR +N +Q+ + + K
Sbjct: 121 EKQWNLSFERTDSSDS-PSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFK 179
Query: 1230 QV-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYE 1054
Q+ S +SP+L QN+ K Y++G V + +LSH EV+ L + +K GLSLE HK RL+ +LG +
Sbjct: 180 QLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCD 239
Query: 1053 PSDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXX 874
PSD ++A+ L+ISR+EL ++ I CSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 PSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 299
Query: 873 XXXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKT 694
GIEK+DSSKG++ISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR AK
Sbjct: 300 LIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKI 359
Query: 693 KLEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVAD 514
+LE++G++P+IDRIA+ LN+SQ+KVRNATEA+S+V SLDRE FPSL+G P ET+HSY+AD
Sbjct: 360 RLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIAD 419
Query: 513 PHLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISM 334
LENNPWHG +W LKDEVN L++ TL ERE++IIRLY+GLD E+LTWE+I ++ +S
Sbjct: 420 NCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSR 479
Query: 333 ER 328
ER
Sbjct: 480 ER 481
>EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus communis]
Length = 508
Score = 477 bits (1227), Expect = e-153
Identities = 249/481 (51%), Positives = 345/481 (71%), Gaps = 4/481 (0%)
Frame = -1
Query: 1758 MAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGPN 1579
MA AAVIGL+AGK LLS++FY S+L +++ + +HG Y + I+A+K S++GP+
Sbjct: 1 MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60
Query: 1578 YPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSMLE 1402
+P + Q ++A KE +++++ ST + F ++ LQKSMLE
Sbjct: 61 FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120
Query: 1401 KQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRRR--KQ 1228
KQW LS ++T +S P ++ K V SG+SARQRR IR +N +Q+ + + KQ
Sbjct: 121 KQWNLSFERTDSSDS-PSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQ 179
Query: 1227 V-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEP 1051
+ S +SP+L QN+ K Y++G V + +LSH EV+ L + +K GLSLE HK RL+ +LG +P
Sbjct: 180 LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 239
Query: 1050 SDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXX 871
SD ++A+ L+ISR+EL ++ I CSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 299
Query: 870 XXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTK 691
GIEK+DSSKG++ISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR AK +
Sbjct: 300 IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 359
Query: 690 LEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADP 511
LE++G++P+IDRIA+ LN+SQ+KVRNATEA+S+V SLDRE FPSL+G P ET+HSY+AD
Sbjct: 360 LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 419
Query: 510 HLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISME 331
LENNPWHG +W LKDEVN L++ TL ERE++IIRLY+GLD E+LTWE+I ++ +S E
Sbjct: 420 CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 479
Query: 330 R 328
R
Sbjct: 480 R 480
>EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]
Length = 508
Score = 476 bits (1224), Expect = e-152
Identities = 256/481 (53%), Positives = 340/481 (70%), Gaps = 3/481 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGLT GK LLS+SF S++ +++ D+GS + + + I+A+K S+
Sbjct: 1 MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60
Query: 1581 NYPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
+ P ++ Q ++A KE ++S+++ ST + F + LQKSML
Sbjct: 61 SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRR-NTIRARNTNQNDYLHRRRKQ 1228
EKQW LS ++T S P + + K V SG+SARQRR NT R + KQ
Sbjct: 121 EKQWTLSFERTVFTES-PSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQ 179
Query: 1227 V-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEP 1051
+ S ISP+L Q++ K Y++G V D +LSH EV+ L +K+K GLSLE+H+ RL+ +LG EP
Sbjct: 180 LRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEP 239
Query: 1050 SDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXX 871
SD +LA+ L+ISR+EL +++IECSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 SDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299
Query: 870 XXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTK 691
GIEK+DSSKGYKISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR AK +
Sbjct: 300 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIR 359
Query: 690 LEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADP 511
LE++GI+PTIDRIA+ LNMSQ+KVRNATEA+S+V SLDR+ FPSL+G P ET+HSY+AD
Sbjct: 360 LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419
Query: 510 HLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISME 331
H+EN PWHG EW LKDEVN L+ TL ERER+IIRLY+GLDKE+LTWE+I ++ +S E
Sbjct: 420 HVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRE 479
Query: 330 R 328
R
Sbjct: 480 R 480
>XP_017630520.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
[Gossypium arboreum]
Length = 503
Score = 475 bits (1223), Expect = e-152
Identities = 254/474 (53%), Positives = 334/474 (70%), Gaps = 3/474 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGL+ GK LLS+SF SE D++ D+GS Y + + I+A++ S+
Sbjct: 1 MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLIVAKRSSNCSQ 60
Query: 1581 NYPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
N P + Q ++A K +++++ ST + W + LQKSML
Sbjct: 61 NLPSSNRHTQLIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQN-DYLHRRRKQ 1228
EKQW LS ++T S P + +SK V SG+SARQRR + + +QN + KQ
Sbjct: 121 EKQWTLSFERTMFIES-PSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPNAKQ 179
Query: 1227 V-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEP 1051
+ S I P+L QN+ K Y++G V + +LSH EV+ L +K+K GLSLE+H RL+ +LG EP
Sbjct: 180 LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCEP 239
Query: 1050 SDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXX 871
SD +LA+ L++SR+EL +R IECSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299
Query: 870 XXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTK 691
GIEK+DSSKGYKISTYVYWWIRQG+S+ +VENSRTLR+P++L RL IR AK +
Sbjct: 300 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359
Query: 690 LEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADP 511
LE++GI+PTIDRIA+ LNMSQ+KVRNATEA+S+V SLDR+ FPSL+G P ET+HSY+AD
Sbjct: 360 LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419
Query: 510 HLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ 349
H+ENNPWHG EW LKDEVN L+D TL ERER+IIRLYHGLDKE+LTWE+I ++
Sbjct: 420 HVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKR 473
>XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Theobroma
cacao]
Length = 508
Score = 475 bits (1222), Expect = e-152
Identities = 254/481 (52%), Positives = 342/481 (71%), Gaps = 3/481 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA AAVIGLT GK LLS+SF S++ +++ D+GS + + + I+A+K S+
Sbjct: 1 MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60
Query: 1581 NYPPGQQK-QFLRACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
+ P ++ Q ++A KE ++S+++ ST + F + LQKSML
Sbjct: 61 SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNHLEVESYDLDYSVEALLLLQKSML 120
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQN-DYLHRRRKQ 1228
EKQW LS ++T S P + + K V SG+SARQRR + + +QN + KQ
Sbjct: 121 EKQWTLSFERTVFTES-PSRKIHKKIPVTCSGVSARQRRFNTKRKILSQNKSIIQPNAKQ 179
Query: 1227 V-STISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYEP 1051
+ S ISP+L Q++ K Y++G V + +LSH EV+ L +K+K GLSLE+H+ RL+ +LG EP
Sbjct: 180 LRSLISPELLQSRLKGYVKGVVSEELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEP 239
Query: 1050 SDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXXX 871
SD +LA+ L+ISR+EL +++IECSLAREKLAMSN+RLVMSIAQ+YDN+GA+M
Sbjct: 240 SDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299
Query: 870 XXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKTK 691
GIEK+DSSKGYKISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR AK +
Sbjct: 300 IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIR 359
Query: 690 LEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVADP 511
LE++GI+PTIDRIA+ LNMSQ+KVRNATEA+S+V SLDR+ FPSL+G P ET+HSY+AD
Sbjct: 360 LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419
Query: 510 HLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISME 331
H+EN PWHG EW LKDEVN L+ TL ERER+IIRLY+GLDKE+LTWE+I ++ +S E
Sbjct: 420 HVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRE 479
Query: 330 R 328
R
Sbjct: 480 R 480
>XP_011011636.1 PREDICTED: RNA polymerase sigma factor sigA-like [Populus euphratica]
XP_011011637.1 PREDICTED: RNA polymerase sigma factor
sigA-like [Populus euphratica]
Length = 508
Score = 475 bits (1222), Expect = e-152
Identities = 252/482 (52%), Positives = 334/482 (69%), Gaps = 4/482 (0%)
Frame = -1
Query: 1761 LMAIAAVIGLTAGKGLLSTSFYSSELCDRVLTVQDHGSGLYSSGPVRCFIIAQKKSDFGP 1582
+MA A+ IGLT GK LLS++FY S+L +R+ V DHG Y + I+A+K S +GP
Sbjct: 1 MMATASFIGLTTGKRLLSSTFYYSDLTERLSNVNDHGIA-YQITTTKSVIVAKKSSKYGP 59
Query: 1581 NYPPGQQKQFL-RACKEELNSSTVASTTDSWFIEYDXXXXXXXXXXXXXXXXXXLQKSML 1405
++P + +A KE +++++ +ST +WF D LQKSML
Sbjct: 60 SFPSSYRNPHSNKALKELIDTASASSTVATWFKALDDFEEESSVLDYSVEALILLQKSML 119
Query: 1404 EKQWRLSLDKTGRRNSNPIDENNSKDEVVRSGLSARQRRNTIRARNTNQNDYLHRR---R 1234
EKQW LS ++ +S I ++N K V SG+SARQRR + +N NQ+ ++ +
Sbjct: 120 EKQWNLSFERINSSDSK-IKKSNKKIPVTCSGVSARQRRLNSKRKNQNQSKFMSCSGDFK 178
Query: 1233 KQVSTISPKLQQNQSKSYIRGYVRDTVLSHIEVINLCQKLKMGLSLEKHKRRLETKLGYE 1054
S ISP L N+ K Y++G V D VL H EV+ L + ++ G+SLE HK L+ +LG E
Sbjct: 179 LPRSDISPDLLLNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGISLEDHKSSLKERLGCE 238
Query: 1053 PSDRELASYLRISRSELNTRMIECSLAREKLAMSNIRLVMSIAQKYDNLGAQMXXXXXXX 874
PSD +LA LRISR++L +++I+CSLA+EKLAMSN+RLVMSIAQK DN+GA+M
Sbjct: 239 PSDEQLADSLRISRADLQSQLIQCSLAKEKLAMSNVRLVMSIAQKNDNMGAEMADLVQAG 298
Query: 873 XXXXXXGIEKYDSSKGYKISTYVYWWIRQGISKVVVENSRTLRIPSHLQVRLFSIRAAKT 694
GIEK+DSSKG+KISTYVYWWIRQG+S+ +VENSRTLR+P+HL RL IR A+
Sbjct: 299 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNARI 358
Query: 693 KLEDRGISPTIDRIAKVLNMSQRKVRNATEAISRVVSLDREPFPSLSGEPSETYHSYVAD 514
+LE++G++P+IDRIA+ LNMSQRKVRNATEAI +V SLDRE FPSL+G P ET+HSY+AD
Sbjct: 359 RLEEKGVTPSIDRIAESLNMSQRKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIAD 418
Query: 513 PHLENNPWHGYHEWCLKDEVNNLLDTTLLERERDIIRLYHGLDKENLTWEEIGRQ*VISM 334
HL NNPWHG EW LK+EVN L+D+ L ERER+IIRLYHGLDKE LTWE+I ++ +S
Sbjct: 419 NHLGNNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRMGLSR 478
Query: 333 ER 328
ER
Sbjct: 479 ER 480