BLASTX nr result
ID: Alisma22_contig00001588
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00001588
(2313 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010929959.1 PREDICTED: cleavage and polyadenylation specifici... 410 e-130
XP_008805116.1 PREDICTED: cleavage and polyadenylation specifici... 404 e-128
XP_009780918.1 PREDICTED: cleavage and polyadenylation specifici... 390 e-122
XP_015076042.1 PREDICTED: cleavage and polyadenylation specifici... 388 e-121
XP_009619090.1 PREDICTED: cleavage and polyadenylation specifici... 386 e-120
XP_019231531.1 PREDICTED: cleavage and polyadenylation specifici... 384 e-120
XP_015894525.1 PREDICTED: cleavage and polyadenylation specifici... 382 e-119
XP_016547542.1 PREDICTED: cleavage and polyadenylation specifici... 381 e-119
ONI30252.1 hypothetical protein PRUPE_1G240200 [Prunus persica] ... 379 e-118
XP_006341786.1 PREDICTED: cleavage and polyadenylation specifici... 377 e-117
XP_010650880.1 PREDICTED: cleavage and polyadenylation specifici... 375 e-116
XP_002282072.3 PREDICTED: cleavage and polyadenylation specifici... 375 e-116
EOY00741.1 RNA-binding family protein isoform 6 [Theobroma cacao] 371 e-115
XP_007044903.1 PREDICTED: cleavage and polyadenylation specifici... 372 e-115
XP_017971402.1 PREDICTED: cleavage and polyadenylation specifici... 372 e-115
XP_017971401.1 PREDICTED: cleavage and polyadenylation specifici... 372 e-115
EOY00736.1 RNA-binding family protein isoform 1 [Theobroma cacao... 371 e-115
EOY00740.1 RNA-binding family protein isoform 5, partial [Theobr... 371 e-115
XP_008389756.1 PREDICTED: cleavage and polyadenylation specifici... 370 e-114
EOY00739.1 RNA-binding family protein isoform 4 [Theobroma cacao] 371 e-114
>XP_010929959.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Elaeis guineensis]
Length = 630
Score = 410 bits (1053), Expect = e-130
Identities = 259/628 (41%), Positives = 329/628 (52%), Gaps = 17/628 (2%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQLDYGD E GGS K+QY G+ G I FL
Sbjct: 1 MDPVMEEQLDYGDEECGGSQKLQYQGSGGAIPALAEEEMMGEDDEFDDLYNDVNIGEDFL 60
Query: 509 QTMEQRHVS-APQTGHGLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVSARV 685
QT++QR P + G +Q++DGPG T G S+PG+ +G++ + S
Sbjct: 61 QTVQQRREPPVPFSNGGFLNQKMDGPGSATPQPGGQASASIPGLGEQGKEPKPGFGSLET 120
Query: 686 DQPKNGPVTGKAMEQETINYSTSFSQVN-RALEMSSGSQMG-AGFRGDPTHP-PLKVS-G 853
+Q G + K +E+ + ++ FS +A E S +G AGF G+ P P K S
Sbjct: 121 EQKSGGFLARKGLEEGSGDFPEGFSHEGIKAPETVQESNVGNAGFHGNSLAPSPPKTSMD 180
Query: 854 PMLTSRPLLTPESGI-SGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPVIGSIDSNGPT 1030
P S PLL P + SG N P+P Q A + V + V+N+ SR +G ++++GPT
Sbjct: 181 PKYASGPLLLPSDSVRSGVRNPQPVPVIQAVA---NSVNHAVMNDNSRSGMGLVNADGPT 237
Query: 1031 VILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPVAAASCKAG 1210
+++VG+L WWTTDA+LES +SQYGRVKEI FF+ERASGKSKGYC+VEFYD AAA+CK G
Sbjct: 238 ILVVGDLHWWTTDAQLESMMSQYGRVKEIKFFEERASGKSKGYCQVEFYDATAAAACKEG 297
Query: 1211 MNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXXXXXXXXXXXX 1390
M G +FNGR C V +AS + LKQMG+ Y R Q Q Q
Sbjct: 298 MYGHMFNGRPCAVEYASPQVLKQMGAAYTNR-QAQAQPQ---------------QHGRRQ 341
Query: 1391 XXXNYGNKAGW-GRGGQGMPXXXXXXXXXXXXXXXXXPKGIMGMGAQFGQGLT------A 1549
G GW GRGGQG P KGI G G G G+T A
Sbjct: 342 MIGGMGRGGGWGGRGGQGPPNRGQGGAGPMRGRGGMGAKGIGGPGGGVGTGVTGGPYGPA 401
Query: 1550 PAMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXXTMNPVGLPGVAPHVNPAFF 1729
MMHPQ +M FD ++ VGLPGVAPHVNPAFF
Sbjct: 402 GGMMHPQGMMGAAFDPTYMGGGGPFGGFSGPAFPGMMPPFQAVSSVGLPGVAPHVNPAFF 461
Query: 1730 GRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-RTKEXXXXXXXXXXXXXXXE 1903
GRGM N MG++GS+GM+G+S GMW D GM GWT E+ G RT E E
Sbjct: 462 GRGMSGNAMGMMGSNGMEGHSVGMWTDTGMAGWTGEDHGRRTGESSYGGDDVAADYGYGE 521
Query: 1904 ATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRDRSNVDRHSEGKDVYRDHXXX 2083
E+ GRSNASREK+ GSERDWSGSS R++ + RE++RDRS+ +R+ E KD YRD
Sbjct: 522 VNNEKVGRSNASREKERGSERDWSGSSERRYRDEREKERDRSDRERYREEKDRYRDQRQR 581
Query: 2084 XXXXXXXXXXXGQY--SRSRNKSEMKHE 2161
G + SRSRNKS M E
Sbjct: 582 DRDWDNESDWDGGHSSSRSRNKSRMVPE 609
>XP_008805116.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Phoenix dactylifera]
Length = 630
Score = 404 bits (1037), Expect = e-128
Identities = 254/629 (40%), Positives = 324/629 (51%), Gaps = 18/629 (2%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQLDYGD EYGGS K+QY G+ G I F+
Sbjct: 1 MDPMMEEQLDYGDEEYGGSQKLQYQGSGGAIPAIAEEEMMGEDDEYDDLYNDVNIGEDFM 60
Query: 509 QTMEQRHVSAPQTGHG-LSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVSARV 685
QTM+QR G+G L +Q+ DGPG T G +S+ G+ EG++ +
Sbjct: 61 QTMQQRREPPVSLGNGGLLNQKTDGPGSATPQMGGQASVSIAGLGEEGKELKPAYGPLET 120
Query: 686 DQPKNGPVTGKAMEQETINYSTSFS-QVNRALEMSSGSQMG-AGFRGDPT--HPPLKVSG 853
+Q G + K +E+ + ++ FS Q ++A E S +G AGF G+ PP
Sbjct: 121 EQKSGGLLARKGLEEGSGDFPEGFSHQGSKAPETVQESNVGNAGFHGNSAAPSPPKPGMD 180
Query: 854 PMLTSRPLLTP-ESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPVIGSIDSNGPT 1030
P + PL P +S SG N P+P NQ + V V+N+ SR +G + ++G
Sbjct: 181 PKYSGGPLSLPSDSARSGVRNPQPVPVNQAVTTAAYHV---VMNDNSRSGMGLVGNDGAA 237
Query: 1031 VILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPVAAASCKAG 1210
+++VG+L WWTTDA+LES +SQYGRVKEI FF+ERASGKSKGYC+VEFYD AAA+CK G
Sbjct: 238 MLVVGDLHWWTTDAQLESVMSQYGRVKEIKFFEERASGKSKGYCQVEFYDATAAAACKEG 297
Query: 1211 MNGCVFNGRACVVTFASAETLKQMGSGYMKR-NQIPVQSQXXXXXXXXXXXXXXXXXXXX 1387
M G FNGR CVV +AS + LKQMG+ Y R +Q Q Q
Sbjct: 298 MYGHAFNGRTCVVEYASPQILKQMGAAYTSRQSQAQPQQQ-----------------GRR 340
Query: 1388 XXXXNYGNKAGW-GRGGQGMPXXXXXXXXXXXXXXXXXPKGIMGMGAQFGQGLT------ 1546
G GW GRGGQG P KG+ G G FG G T
Sbjct: 341 QMNSGMGRGGGWGGRGGQGPPNRGQGNAGPMRGRGAMGAKGMGGPGGGFGTGATGGPYGP 400
Query: 1547 APAMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXXTMNPVGLPGVAPHVNPAF 1726
A MMHPQ +M FD ++ VGLPGVAPHVNPAF
Sbjct: 401 AGGMMHPQGMMGAAFDPTYMGGGGPYGGFSGPAFPGMMPPFQAVSSVGLPGVAPHVNPAF 460
Query: 1727 FGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-RTKEXXXXXXXXXXXXXXX 1900
FGRGM N MG++G +GM+G+S GMW D G+ GWT E+ G RT+E
Sbjct: 461 FGRGMSGNAMGMMGGNGMEGHSAGMWTDMGIGGWTGEDHGRRTRESSYGGDDVAADYGYG 520
Query: 1901 EATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRDRSNVDRHSEGKDVYRDHXX 2080
E ER RSNASREK+ GSERDWSGSS R++ + RE++RDRS+ +R+ E KD Y DH
Sbjct: 521 EVNNERVERSNASREKERGSERDWSGSSERRYRDEREKERDRSDKERYREEKDRYMDHRQ 580
Query: 2081 XXXXXXXXXXXXGQY--SRSRNKSEMKHE 2161
G + SRSRNKS E
Sbjct: 581 RDRDWDNEGDWDGGHSSSRSRNKSRTVQE 609
>XP_009780918.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Nicotiana sylvestris]
Length = 648
Score = 390 bits (1001), Expect = e-122
Identities = 254/648 (39%), Positives = 325/648 (50%), Gaps = 39/648 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD +EQLDYGD EYGGSHK+QYHG G I GFL
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGG-GTIPALAEDEMMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTGHGLSSQ---------RIDGPGVNTADHGVLVGMSMPGIATEGRDNR 661
Q P +S Q + DG G + A +PG+ATEG+
Sbjct: 60 QLQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEA--------KIPGVATEGK--- 108
Query: 662 MPGVSARVDQPKNGPVTGKAMEQETINYSTSFSQVNRALEM--SSGSQMG-AGFRG---- 820
G R + K+GPV + E+ +Q R L M + SQ+G +G++G
Sbjct: 109 YAGTEVRFPEQKSGPVVERGTERPA-----DAAQKGRPLAMMLTRDSQVGNSGYQGSIQT 163
Query: 821 ------DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVIN 982
DP + P K + + PL+ SG+ G +PTNQ S+ GN + +P+I+
Sbjct: 164 TQKIGADPINMPEKNANE---ATPLVN--SGVGGSRVVTQMPTNQLSSSGNVNINSPIIS 218
Query: 983 EVSRPVIGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYC 1162
E P+ S++ NG T++ VGEL WWTTDAE+ES L+QYG VKEI FFDERASGKSKGYC
Sbjct: 219 ET--PIRPSLE-NGNTMLFVGELHWWTTDAEIESVLTQYGNVKEIKFFDERASGKSKGYC 275
Query: 1163 KVEFYDPVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXX 1342
+VEF+DP AAASCK GMNG +FNGRACVV FA+ +T+KQMGS YM + Q VQ+Q
Sbjct: 276 QVEFFDPAAAASCKEGMNGHIFNGRACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGRR 335
Query: 1343 XXXXXXXXXXXXXXXXXXXNYGNKAGWGRGGQGMP------XXXXXXXXXXXXXXXXXPK 1504
+ WGRGG GMP P
Sbjct: 336 PMNEGVGRGGANYAPGDAGRNFGRGSWGRGGPGMPNRGPGGGPVRGRGGMGAKNMMGNPG 395
Query: 1505 GIMGMGAQFGQGLTAPA-------MMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXX 1663
G G FGQGL PA +MHPQ +M GFD
Sbjct: 396 AGTGPGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPGFMGRGAGYGGFSGPAFPGMIP 455
Query: 1664 XXXTMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGD-PGMGWTAEEP 1840
+NP+GLPGVAPHVNPAFFGRGM NGMG++G++GMDG GMW D G GW EE
Sbjct: 456 QFPAVNPMGLPGVAPHVNPAFFGRGMSANGMGMMGNAGMDGPHPGMWTDTSGGGWGGEEH 515
Query: 1841 G-RTKEXXXXXXXXXXXXXXXEATQERGGRSNA-SREKDVGSERDWSGSSGRKHSENREQ 2014
G RT+E E + ++G RS+A SREK+ GSERDWSG+S R+H + RE
Sbjct: 516 GRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSERRHRDEREH 575
Query: 2015 DRDRSNVD-RHSEGKDVYRDHXXXXXXXXXXXXXXGQYSRSRNKSEMK 2155
DR+R + + R+ E +D YRD+ S SR++S +
Sbjct: 576 DRERYDREHRYKEERDGYRDYRQKERESEYEDDYDRGQSSSRSRSRSR 623
>XP_015076042.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Solanum pennellii]
Length = 648
Score = 388 bits (997), Expect = e-121
Identities = 252/636 (39%), Positives = 322/636 (50%), Gaps = 27/636 (4%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD +EQLDYGD EYGGSHK+QYHG+ G I GFL
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGS-GTIPALAEDEMLGEDDEYDDLYNDVNIGEGFL 59
Query: 509 QTMEQRHVSAPQTGHGLSSQRIDGPGVNTADHGVLVG--MSMPGIATEGRDNRMPGVSAR 682
Q +++ V P G S ++ + G L +PGIATE + G +
Sbjct: 60 Q-LQRSEVPVPSVDAGNGSFQVQKDSFPASRAGGLGSEEAKIPGIATE---EKYAGTEVQ 115
Query: 683 VDQPKNGPVTGKAMEQETINYSTSFSQVN-RALEMSSGSQMG-AGFRGDPTHPPLKVSGP 856
Q K GP+ +E+ET + + + AL M+ SQ+G +G++G P + P
Sbjct: 116 FPQQKGGPL----VERETERPADAAQKARPSALTMNLNSQVGNSGYQGSMPMPQKIGADP 171
Query: 857 ML-----TSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVS-RPVIGSIDS 1018
M TS S ++G +PTNQ ++ GN + NPVI+E RP +
Sbjct: 172 MAMPEINTSEATPLVNSAVAGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSL----E 227
Query: 1019 NGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPVAAAS 1198
NG T++ VGEL WWTTDAELES L+QYG VKEI FFDERASGKSKGYC+VEF+DP +AA+
Sbjct: 228 NGNTMLFVGELHWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAA 287
Query: 1199 CKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXXXXXXXX 1378
CK GMNG FNGR CVV FA+A+T+KQMGS Y + Q VQSQ
Sbjct: 288 CKEGMNGYNFNGRPCVVAFATAQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGGPN 347
Query: 1379 XXXXXXXNYGNKAGWGRGGQGMP------XXXXXXXXXXXXXXXXXPKGIMGMGAQFGQG 1540
+ WGRGG GMP P G G FGQG
Sbjct: 348 YTPGDAGRNFGRGSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMMVNPGAGNGAGGAFGQG 407
Query: 1541 LTAPA-------MMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXXTMNPVGLPG 1699
L PA +MHPQ +M GFD +NP+GLPG
Sbjct: 408 LAGPAFGGPPPGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFPAVNPMGLPG 467
Query: 1700 VAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGD-PGMGWTAEEPG-RTKEXXXXXX 1873
VAPHVNPAFFGRGM NGMG++G++GMDG GMW D G GW EE G RT+E
Sbjct: 468 VAPHVNPAFFGRGMAANGMGMMGTAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYGGE 527
Query: 1874 XXXXXXXXXEATQERGGRSNA-SREKDVGSERDWSGSSGRKHSENREQDRDRSNVD-RHS 2047
E + ++G RS+A SREK+ GSERDWSG+S R+H + RE DRDR + + R+
Sbjct: 528 DNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDRRHRDEREHDRDRHDKEHRYR 587
Query: 2048 EGKDVYRDHXXXXXXXXXXXXXXGQYSRSRNKSEMK 2155
E +D YRD+ S SR++S+ +
Sbjct: 588 EERDGYRDYRQKERESEYEEEYDRGQSSSRSRSKSR 623
>XP_009619090.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Nicotiana tomentosiformis]
Length = 648
Score = 386 bits (991), Expect = e-120
Identities = 257/653 (39%), Positives = 327/653 (50%), Gaps = 42/653 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD +EQLDYGD EYGGSHK+QYHG G I GFL
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGG-GTIPALAEDEMMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTGHGLSSQR----------IDGPGVNTADHGVLVGMSMPGIATEGRDN 658
Q +++ P G S R DG G + A +PG+ATEG+
Sbjct: 60 Q-LQRSEAPVPPVDAGNGSFRDQKASFPDAKADGIGSDEA--------KIPGVATEGK-- 108
Query: 659 RMPGVSARVDQPKNGPVTGKAMEQETINYSTSFSQVNRALEM--SSGSQMG-AGFRG--- 820
G R + K+GPV + E+ +Q R L M + SQMG +G++G
Sbjct: 109 -YAGTEVRFPEQKSGPVAERGTERPA-----DAAQKGRPLAMMLTGDSQMGNSGYQGSIP 162
Query: 821 -------DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVI 979
DP + P K + + PL+ SG+ G +PTNQ S+ GN + +P+I
Sbjct: 163 TTQKIGADPINMPEKNANE---ATPLVN--SGVGGSRVVPQMPTNQLSSSGNVNMNSPII 217
Query: 980 NEVSRPVIGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGY 1159
+E P+ S++ NG T++ VGEL WWTTD+E+ES L+QYG VKEI FFDERASGKSKGY
Sbjct: 218 SET--PIRPSLE-NGNTMLFVGELHWWTTDSEIESVLTQYGNVKEIKFFDERASGKSKGY 274
Query: 1160 CKVEFYDPVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXX 1339
C+VEF+DP AAASCK GMNG +FNGRACVV FA+ +T+KQMGS YM + Q VQ+Q
Sbjct: 275 CQVEFFDPAAAASCKEGMNGHIFNGRACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGR 334
Query: 1340 XXXXXXXXXXXXXXXXXXXXNYGNKAGWGRGGQGMP------XXXXXXXXXXXXXXXXXP 1501
+ WGRGG GMP P
Sbjct: 335 RPMNEGVGRGGANYTPGDAGRNFGRGSWGRGGPGMPNRGPGGGPVRGRGGMGAKNMMGNP 394
Query: 1502 KGIMGMGAQFGQGLTAPA-------MMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXX 1660
G G FGQGL PA +MHPQ +M GFD
Sbjct: 395 GTGTGHGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPGFMGRGAGYGGFSGPAFPGMI 454
Query: 1661 XXXXTMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGD-PGMGWTAEE 1837
+NP+GLPGVAPHVNPAFFGRGM NGMG++G++GMDG GMW D G GW EE
Sbjct: 455 PQFPAVNPMGLPGVAPHVNPAFFGRGMSANGMGMMGNAGMDGPHPGMWTDTSGGGWGGEE 514
Query: 1838 PG-RTKEXXXXXXXXXXXXXXXEATQERGGRSNA-SREKDVGSERDWSGSSGRKHSENRE 2011
G RT+E E + ++G RS+A SREK+ GSERDWSG+S R+H + RE
Sbjct: 515 HGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSERRHRDERE 574
Query: 2012 QDRDRSNVD-RHSEGKDVYRD--HXXXXXXXXXXXXXXGQYSRSRNKSEMKHE 2161
DR+R + + R+ E +D YR H SRSR++S E
Sbjct: 575 HDRERYDREHRYKEERDGYRHYRHKEREAEYEDDYDRGQSSSRSRSRSRAAQE 627
>XP_019231531.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Nicotiana attenuata] OIT28678.1 hypothetical protein
A4A49_35854 [Nicotiana attenuata]
Length = 648
Score = 384 bits (985), Expect = e-120
Identities = 252/650 (38%), Positives = 323/650 (49%), Gaps = 39/650 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD +EQLDYGD EYGGSHK+QYHG G I GFL
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGG-GTIPALAEDEMMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTGHGLSSQ---------RIDGPGVNTADHGVLVGMSMPGIATEGRDNR 661
Q P +S Q + DG G + A +P +ATEG+
Sbjct: 60 QLQRSEAPVPPVDAGNVSFQDQKASFPDAKADGIGSDEA--------KIPCVATEGK--- 108
Query: 662 MPGVSARVDQPKNGPVTGKAMEQETINYSTSFSQVNRALEMSSGSQMG-AGFRG------ 820
G R + K+GPV +A E+ + A+ ++ SQMG +G++G
Sbjct: 109 YAGTEVRFPEQKSGPVVERATERPA---GAAQKGKPLAMTLTRDSQMGNSGYQGSIPTTQ 165
Query: 821 ----DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEV 988
DP + P K + + PL+ SG+ G +P NQ + GN + +P+I+E
Sbjct: 166 KIGADPINMPEKNANE---ATPLVN--SGVGGSRIVPQMPANQLGSSGNVNMNSPIISET 220
Query: 989 SRPVIGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKV 1168
P+ S++ NG T++ VGEL WWTTDAE+ES L+QYG VKEI FFDERASGKSKGYC+V
Sbjct: 221 --PIRPSLE-NGNTMLFVGELHWWTTDAEIESVLTQYGNVKEIKFFDERASGKSKGYCQV 277
Query: 1169 EFYDPVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXX 1348
EF+DP AAASCK GMNG +FNGRACVV FA+ +T+KQMGS YM + Q VQ+Q
Sbjct: 278 EFFDPAAAASCKEGMNGHIFNGRACVVAFATPQTIKQMGSSYMNKTQNQVQTQPQGRRPM 337
Query: 1349 XXXXXXXXXXXXXXXXXNYGNKAGWGRGGQGMP------XXXXXXXXXXXXXXXXXPKGI 1510
+ WGRGG GMP P
Sbjct: 338 NEGVGRGGANYAPGDAGRNFGRGSWGRGGPGMPNRGPGGGPVRGRGGMGAKNMMGNPGAG 397
Query: 1511 MGMGAQFGQGLTAPA-------MMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXX 1669
G G FGQGL PA +MHPQ +M GFD
Sbjct: 398 TGPGGAFGQGLAGPAFGGPPAGLMHPQGMMGPGFDPGFMGRGAGYGGFSGPAFPGMIPQF 457
Query: 1670 XTMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGD-PGMGWTAEEPG- 1843
+NP+GLPGVAPHVNPAFFGRGM NGMG++G++GMDG GMW D G GW EE G
Sbjct: 458 PAVNPMGLPGVAPHVNPAFFGRGMSANGMGMMGNAGMDGPHPGMWTDTSGGGWGGEEHGR 517
Query: 1844 RTKEXXXXXXXXXXXXXXXEATQERGGRSNA-SREKDVGSERDWSGSSGRKHSENREQDR 2020
RT+E E + ++G RS+A SREK+ GSERDWSG+S ++H + RE DR
Sbjct: 518 RTRESSYGGEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSEKRHRDEREHDR 577
Query: 2021 DRSNVD-RHSEGKDVYRD--HXXXXXXXXXXXXXXGQYSRSRNKSEMKHE 2161
+R + + R+ E +D YRD H SRSR++S E
Sbjct: 578 ERYDREHRYKEERDGYRDYRHKEREAEYEDDYDRGQSSSRSRSRSRAAQE 627
>XP_015894525.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Ziziphus jujuba]
Length = 659
Score = 382 bits (981), Expect = e-119
Identities = 253/619 (40%), Positives = 326/619 (52%), Gaps = 37/619 (5%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+DY D EYGG+ K+QY G+ G I GFL
Sbjct: 1 MDPMAEEQIDYDDEEYGGAQKLQYQGS-GTIPALADEELMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTG---HGLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVSA 679
Q + + P TG G +Q+IDGP + G +++PG++ +G+ G+ A
Sbjct: 60 Q-LHRSEAPQPPTGVGNGGHQAQKIDGPEPRE-EVGGSQELNIPGVSVQGK---YAGIGA 114
Query: 680 RVDQPKNGPVTGKAMEQETINYSTSFS-QVNRALEMSSGSQMG-AGFRGDPT-HPPLKVS 850
+ + K GPV K E ++ Y S Q R +E++ +Q+ GF+G + P + V
Sbjct: 115 QFPEQKEGPVVDKGSEARSMGYPDGASTQKGRVMEVNHDTQVRHMGFQGSTSITPSIGVD 174
Query: 851 GPMLT----SRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVS-RPVIGSID 1015
+T S P+ T SG +G +P NQ +A N + P++NE RP I
Sbjct: 175 SSNITGKTVSEPVPTLNSGSAGPRGGPQMPANQMNA--NVNIHRPMVNENQIRPPI---- 228
Query: 1016 SNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPVAAA 1195
NG T++ VGEL WWTTDAELES LSQYGRVKEI FFDERASGKSKGYC+VEFYD AAA
Sbjct: 229 ENGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDSSAAA 288
Query: 1196 SCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQS--QXXXXXXXXXXXXXX 1369
+CK GMNG VFNGRACVV FAS +TLKQMG+ Y+ +NQ QS Q
Sbjct: 289 ACKEGMNGHVFNGRACVVAFASPQTLKQMGASYVNKNQAQNQSQPQGRRPMNDGGGRGGN 348
Query: 1370 XXXXXXXXXXNYGNKAGWGRGGQG-MPXXXXXXXXXXXXXXXXXPKGIMGM--------- 1519
N+G + GWGRGGQG + K ++G
Sbjct: 349 MNYQSGESGRNFG-RGGWGRGGQGILNRGPGGGGPMRGRGGAMGAKNMVGNTAGVGGNAG 407
Query: 1520 GAQFGQGLTAP-------AMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXXTM 1678
G +GQGL P MM+PQ +M +GFD +
Sbjct: 408 GGGYGQGLPGPGFGGPAGGMMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFHGMLPSFPAV 467
Query: 1679 NPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-RTK 1852
N +GL GVAPHVNPAFFGRGM NGMG++GSS MDG+ GMW DP M GW+ EE G R +
Sbjct: 468 NTMGLAGVAPHVNPAFFGRGMASNGMGMMGSSLMDGHHAGMWTDPSMGGWSGEEHGRRMR 527
Query: 1853 EXXXXXXXXXXXXXXXEATQERGGRSN-ASREKDVGSERDWSGSSGRKHSENREQDRDRS 2029
E EA QE+G RS+ ASRE++ GSERDWSG+S R+H + R+QD DRS
Sbjct: 528 ESSYGGDDGASEYGYGEADQEKGVRSSAASRERERGSERDWSGNSERRHRDERDQDWDRS 587
Query: 2030 NVD----RHSEGKDVYRDH 2074
+ R+ E KD +RDH
Sbjct: 588 EKEHREHRYREEKDGHRDH 606
>XP_016547542.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Capsicum annuum]
Length = 648
Score = 381 bits (979), Expect = e-119
Identities = 243/640 (37%), Positives = 329/640 (51%), Gaps = 31/640 (4%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD +EQLDYGD EYGGSHK+QYHG+ G I GFL
Sbjct: 1 MDQATDEQLDYGDEEYGGSHKMQYHGS-GTIPALAEDEMMGEDDEYDDLYNDVNIGEGFL 59
Query: 509 QTMEQRH-VSAPQTGHG-LSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVSAR 682
Q + + + TG+G +Q+ P + G +PG+ATE + +
Sbjct: 60 QLQQSEGPIPSVDTGNGSFQAQKASFPDSSAGGIGSEEA-KIPGVATE---RKYASTEVQ 115
Query: 683 VDQPKNGPVTGKAMEQETINYSTSFSQVNRALEMSSGSQMG-AGFRGDPTHPPLKVSGPM 859
Q K G V + +E+ + A+ ++ SQ+G +G++G + P + +G
Sbjct: 116 FPQQKGGSVVEREIERPA---DAAKKARPSAITLTLNSQVGNSGYQG--SMPMSQTTG-- 168
Query: 860 LTSRPLLTPE-----------SGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPVIG 1006
+ P+ PE SG++G + +PTNQ ++ GN + +P+I+E P+
Sbjct: 169 --ADPITMPEKNASEVTPLVNSGVAGSRFVSHMPTNQLNSSGNVNMNSPIISET--PIRA 224
Query: 1007 SIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPV 1186
S++ NG T++ VGEL WWTTD+ELES L+QYG+VKEI FFDERASGKSKGYC+VEF+DP
Sbjct: 225 SLE-NGNTMLFVGELHWWTTDSELESVLTQYGKVKEIKFFDERASGKSKGYCQVEFFDPA 283
Query: 1187 AAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXXXX 1366
+AA+CK GMNG +FNGRACVV FA+ +T+KQMGS Y+ + Q VQSQ
Sbjct: 284 SAAACKEGMNGYIFNGRACVVAFATPQTIKQMGSSYVNKTQTQVQSQPQGRRPMNEGVGR 343
Query: 1367 XXXXXXXXXXXNYGNKAGWGRGGQGMPXXXXXXXXXXXXXXXXXPKGIM------GMGAQ 1528
+ WGRGG GM ++ G G
Sbjct: 344 GGVNYTPGDAGRNFGRGSWGRGGPGMANRGPGGGPVRGRGSMGSKNMVVNPGAGNGAGGA 403
Query: 1529 FGQGLTAPA-------MMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXXTMNPV 1687
FGQGL PA +MHPQ +M GFD +NP+
Sbjct: 404 FGQGLAGPAFGGPPAGLMHPQGMMGPGFDPGFMSRGAGYGGFSGPAFPGMIPPFPAVNPL 463
Query: 1688 GLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGD-PGMGWTAEEPG-RTKEXX 1861
GLPGVAPHVNPAFFGRGM NGMG++G++GMDG GMW D G GW EE G RT+E
Sbjct: 464 GLPGVAPHVNPAFFGRGMTANGMGMMGTAGMDGPHPGMWTDTSGGGWGGEENGRRTRESS 523
Query: 1862 XXXXXXXXXXXXXEATQERGGRSNA-SREKDVGSERDWSGSSGRKHSENREQDRDRSNVD 2038
EA+ ++G RS+A SREK+ GSERDWSG+S R+H + RE DR+R + D
Sbjct: 524 YGCEDNASEYGYGEASHDKGARSSAVSREKERGSERDWSGNSDRRHRDEREHDRERYDKD 583
Query: 2039 -RHSEGKDVYRDHXXXXXXXXXXXXXXGQYSRSRNKSEMK 2155
R+ E +D YRD+ S SR++S +
Sbjct: 584 HRYREERDDYRDYRQKERESEYEEDYDRGQSSSRSRSRSR 623
>ONI30252.1 hypothetical protein PRUPE_1G240200 [Prunus persica] ONI30253.1
hypothetical protein PRUPE_1G240200 [Prunus persica]
ONI30254.1 hypothetical protein PRUPE_1G240200 [Prunus
persica] ONI30255.1 hypothetical protein PRUPE_1G240200
[Prunus persica] ONI30256.1 hypothetical protein
PRUPE_1G240200 [Prunus persica] ONI30257.1 hypothetical
protein PRUPE_1G240200 [Prunus persica]
Length = 660
Score = 379 bits (974), Expect = e-118
Identities = 258/650 (39%), Positives = 322/650 (49%), Gaps = 41/650 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+DY D EYGG+ K+QY G+ G I GFL
Sbjct: 1 MDPMAEEQIDYEDEEYGGAQKLQYQGS-GAISALADEEPMVEDDEYDDLYNDVNVREGFL 59
Query: 509 QTMEQRHVSAPQTG---HGLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVSA 679
Q M + P G GL +Q+ D GV +PG++ +G+ + A
Sbjct: 60 Q-MHRSEAPLPPGGVGNGGLQAQKTDVTETRV-QAGVSQESKIPGVSVQGKYS---SAVA 114
Query: 680 RVDQPKNGPVTGKAMEQETINY--STSFSQVNRALEMSSGSQMG-AGFRGDPTHPPLKVS 850
+ + + P K E + Y S SQ RA+EMS +Q+ GF+G T PP V
Sbjct: 115 QFPEQQGQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPP-NVG 173
Query: 851 GPM--LTSRPLL----TPESGISGKLNAAPLPTNQTSAV--GNHPVINPVINEVSRPVIG 1006
G +T + L + SG +G +PTNQ S N P+ N N++ PV
Sbjct: 174 GDSSDITGKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNE--NQIRPPV-- 229
Query: 1007 SIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPV 1186
NG T++ VGEL WWTTDAELES LSQYGRVKEI FFDERASGKSKGYC+VEF+DP
Sbjct: 230 ---ENGSTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPA 286
Query: 1187 AAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQ---XXXXXXXXXX 1357
AA +CK GM+G +FNGRACVV FAS +TLKQMG+ Y+ ++Q QSQ
Sbjct: 287 AATACKEGMDGYLFNGRACVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNEGVGR 346
Query: 1358 XXXXXXXXXXXXXXNYGNKAGWGRGGQGMP--------XXXXXXXXXXXXXXXXXPKGI- 1510
N+G + GWGRGGQG+ P G+
Sbjct: 347 GGGVNYQTGDTGGRNFG-RGGWGRGGQGVANRGPGGGGPMRGRGGAMGAKNMAGNPAGVG 405
Query: 1511 MGMGAQFGQGLTAP-------AMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXX 1669
G +GQGL P MM+PQ +M GFD
Sbjct: 406 TGANGGYGQGLAGPGFGGPVGGMMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSF 465
Query: 1670 XTMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG- 1843
+N +GL GVAPHVNPAFFGRGM NGMG++GSSGMDG+ GMW DP M GW +E G
Sbjct: 466 PAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMDGHHAGMWNDPSMGGWGGDEHGR 525
Query: 1844 RTKEXXXXXXXXXXXXXXXEATQERGGRSNA-SREKDVGSERDWSGSSGRKHSENREQDR 2020
RT+E EA E+GGRSNA SRE++ GSERDWSG+S R+H + REQD
Sbjct: 526 RTRESSYGGDDGASEYGYGEANHEKGGRSNAPSRERERGSERDWSGNSERRHRDEREQDW 585
Query: 2021 DRS-----NVDRHSEGKDVYRDHXXXXXXXXXXXXXXGQYSRSRNKSEMK 2155
DRS R+ E KD YRDH S SR +S K
Sbjct: 586 DRSERGEHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQSSSRPRSRSK 635
>XP_006341786.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Solanum tuberosum] XP_006341787.1 PREDICTED: cleavage
and polyadenylation specificity factor subunit 6 [Solanum
tuberosum] XP_015161766.1 PREDICTED: cleavage and
polyadenylation specificity factor subunit 6 [Solanum
tuberosum] XP_015161767.1 PREDICTED: cleavage and
polyadenylation specificity factor subunit 6 [Solanum
tuberosum]
Length = 648
Score = 377 bits (969), Expect = e-117
Identities = 249/638 (39%), Positives = 320/638 (50%), Gaps = 29/638 (4%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD +EQLDYGD EYGGSHK+QYHG+ G I GFL
Sbjct: 1 MDPTADEQLDYGDEEYGGSHKMQYHGS-GTIPALAEDEMMGEDDEYDDLYNDVNIGEGFL 59
Query: 509 QTMEQRHVSAPQTGHGLSSQRIDGPGVNTADHGVLVG--MSMPGIATEGRDNRMPGVSAR 682
Q +++ V P G + + + G L +PGIATEG+ G +
Sbjct: 60 Q-LQRSEVPVPSVDAGNGNFQAQKDSFPASRAGGLGSEEAKIPGIATEGK---YAGTEVQ 115
Query: 683 VDQPKNGPVTGKAMEQETINYSTSFSQVN-RALEMSSGSQMG-AGFRGDPTHPPLKVSGP 856
Q K PV +E+ET + + + A+ M+ SQ G +G++G P + P
Sbjct: 116 FPQQKGEPV----VERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADP 171
Query: 857 MLT-------SRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVS-RPVIGSI 1012
M + PL+ S + G +PTNQ ++ GN + NPVI+E RP +
Sbjct: 172 MAMPEKNASEATPLMN--SVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSL--- 226
Query: 1013 DSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPVAA 1192
NG T++ VGEL WWTTDAELES L+QYG VKEI FFDERASGKSKGYC+VEF+DP +A
Sbjct: 227 -ENGNTMLFVGELHWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASA 285
Query: 1193 ASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXXXXXX 1372
A+CK GMNG FNGRACVV FA+ +T+KQMGS Y + Q VQSQ
Sbjct: 286 AACKEGMNGYNFNGRACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGRGG 345
Query: 1373 XXXXXXXXXNYGNKAGWGRGGQGMP------XXXXXXXXXXXXXXXXXPKGIMGMGAQFG 1534
+ WGRGG GMP P G G FG
Sbjct: 346 PNYTPGDAGRNFGRGSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMMVNPGAGNGAGGAFG 405
Query: 1535 QGLTAPA-------MMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXXTMNPVGL 1693
QGL PA +MHPQ +M GFD +NP+GL
Sbjct: 406 QGLAGPAFGGPPAGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGL 465
Query: 1694 PGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGD-PGMGWTAEEPG-RTKEXXXX 1867
PGVAPHVNPAFFGRGM NGMG++ ++GMDG GMW D G GW EE G RT+E
Sbjct: 466 PGVAPHVNPAFFGRGMAANGMGMMSAAGMDGPHPGMWTDTSGGGWGGEEHGRRTRESSYG 525
Query: 1868 XXXXXXXXXXXEATQERGGRSNA-SREKDVGSERDWSGSSGRKHSENREQDRDRSNVD-R 2041
E + ++G RS+A SREK+ GSERDWSG+S ++H + RE DRDR + + R
Sbjct: 526 GEDNASEYGYGEVSHDKGARSSAVSREKERGSERDWSGNSDKRHRDEREHDRDRHDKEHR 585
Query: 2042 HSEGKDVYRDHXXXXXXXXXXXXXXGQYSRSRNKSEMK 2155
+ E +D YRD+ S SR++S+ +
Sbjct: 586 YREERDGYRDYRQKERESEYEEDYDRGQSSSRSRSKSR 623
>XP_010650880.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera] XP_010650883.1
PREDICTED: cleavage and polyadenylation specificity
factor subunit CG7185 isoform X2 [Vitis vinifera]
XP_010650886.1 PREDICTED: cleavage and polyadenylation
specificity factor subunit CG7185 isoform X2 [Vitis
vinifera] XP_019075332.1 PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185 isoform
X2 [Vitis vinifera]
Length = 650
Score = 375 bits (963), Expect = e-116
Identities = 253/642 (39%), Positives = 318/642 (49%), Gaps = 33/642 (5%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQLDY D EYGG+ K+ + G G I GFL
Sbjct: 1 MDPMAEEQLDYEDEEYGGAQKMPFQGG-GAISALADDELMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQ---TGHGLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVSA 679
Q M + AP G + + D P + G G+ +PG++ EG+ + +
Sbjct: 60 Q-MHRSEAPAPSGVMAGGPFQAHKTDVPP-QKLEAGTSQGLIIPGVSIEGKYS-----NP 112
Query: 680 RVDQPKNGPVTGKAMEQETINY--STSFSQVNRALEMSSGSQM-GAGFRGDPTHP----- 835
+ K GP+ K E + ++ S SQ R LEM+ +Q+ GF+G P
Sbjct: 113 HFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGA 172
Query: 836 -PLKVSGPMLT-SRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVS-RPVIG 1006
P V G + S P+L SG G + +NQ N V P++NE RP +
Sbjct: 173 EPSDVHGKIANESTPVLN--SGTGGPRAVPQMLSNQMGM--NVNVNRPMVNENQIRPAV- 227
Query: 1007 SIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPV 1186
NG T++ VGEL WWTTDAELES LSQYGRVKEI FFDERASGKSKGYC+VEFYD
Sbjct: 228 ---DNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDAS 284
Query: 1187 AAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXXXX 1366
AAA+CK GMNG +FNGRACVV FAS +TLKQMG+ YM + Q QSQ
Sbjct: 285 AAAACKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQSQSQGRRPMNDGVGRGG 344
Query: 1367 XXXXXXXXXXXNYGNKAGWGRGGQGM--------PXXXXXXXXXXXXXXXXXPKGIMGMG 1522
NYG + GWGRGGQG+ G+ G
Sbjct: 345 GMNMQGGDAGRNYG-RGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMVGNTAGVGASG 403
Query: 1523 AQFGQGLTAP-------AMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXXTMN 1681
+GQGL P +MHPQ +M +GFD +N
Sbjct: 404 GGYGQGLAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVN 463
Query: 1682 PVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-RTKE 1855
+GL GVAPHVNPAFFGRGM NGMG++G++GMDG+ GMW D M GW EE G RT+E
Sbjct: 464 TMGLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRE 523
Query: 1856 XXXXXXXXXXXXXXXEATQERGGRSN-ASREKDVGSERDWSGSSGRKHSENREQDRDRSN 2032
E E+ GRSN ASREK+ GSERDWSG+S R+H + REQD +RS+
Sbjct: 524 SSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSD 583
Query: 2033 VD-RHSEGKDVYRDHXXXXXXXXXXXXXXGQYSRSRNKSEMK 2155
D R+ E KD YRDH S SR++S +
Sbjct: 584 KDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSR 625
>XP_002282072.3 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X1 [Vitis vinifera]
Length = 656
Score = 375 bits (963), Expect = e-116
Identities = 253/642 (39%), Positives = 318/642 (49%), Gaps = 33/642 (5%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQLDY D EYGG+ K+ + G G I GFL
Sbjct: 7 MDPMAEEQLDYEDEEYGGAQKMPFQGG-GAISALADDELMGEDDEYDDLYNDVNVGEGFL 65
Query: 509 QTMEQRHVSAPQ---TGHGLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVSA 679
Q M + AP G + + D P + G G+ +PG++ EG+ + +
Sbjct: 66 Q-MHRSEAPAPSGVMAGGPFQAHKTDVPP-QKLEAGTSQGLIIPGVSIEGKYS-----NP 118
Query: 680 RVDQPKNGPVTGKAMEQETINY--STSFSQVNRALEMSSGSQM-GAGFRGDPTHP----- 835
+ K GP+ K E + ++ S SQ R LEM+ +Q+ GF+G P
Sbjct: 119 HFHEKKEGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGA 178
Query: 836 -PLKVSGPMLT-SRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVS-RPVIG 1006
P V G + S P+L SG G + +NQ N V P++NE RP +
Sbjct: 179 EPSDVHGKIANESTPVLN--SGTGGPRAVPQMLSNQMGM--NVNVNRPMVNENQIRPAV- 233
Query: 1007 SIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDPV 1186
NG T++ VGEL WWTTDAELES LSQYGRVKEI FFDERASGKSKGYC+VEFYD
Sbjct: 234 ---DNGATMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDAS 290
Query: 1187 AAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXXXX 1366
AAA+CK GMNG +FNGRACVV FAS +TLKQMG+ YM + Q QSQ
Sbjct: 291 AAAACKEGMNGYIFNGRACVVAFASPQTLKQMGASYMNKTQAQSQSQGRRPMNDGVGRGG 350
Query: 1367 XXXXXXXXXXXNYGNKAGWGRGGQGM--------PXXXXXXXXXXXXXXXXXPKGIMGMG 1522
NYG + GWGRGGQG+ G+ G
Sbjct: 351 GMNMQGGDAGRNYG-RGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMVGNTAGVGASG 409
Query: 1523 AQFGQGLTAP-------AMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXXTMN 1681
+GQGL P +MHPQ +M +GFD +N
Sbjct: 410 GGYGQGLAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVN 469
Query: 1682 PVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-RTKE 1855
+GL GVAPHVNPAFFGRGM NGMG++G++GMDG+ GMW D M GW EE G RT+E
Sbjct: 470 TMGLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRE 529
Query: 1856 XXXXXXXXXXXXXXXEATQERGGRSN-ASREKDVGSERDWSGSSGRKHSENREQDRDRSN 2032
E E+ GRSN ASREK+ GSERDWSG+S R+H + REQD +RS+
Sbjct: 530 SSYGGDDGASDYGYGEVNHEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSD 589
Query: 2033 VD-RHSEGKDVYRDHXXXXXXXXXXXXXXGQYSRSRNKSEMK 2155
D R+ E KD YRDH S SR++S +
Sbjct: 590 KDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSR 631
>EOY00741.1 RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 602
Score = 371 bits (952), Expect = e-115
Identities = 244/620 (39%), Positives = 308/620 (49%), Gaps = 38/620 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+D+GD EYGG K+QY G+ G I GFL
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGS-GAIPALADEEMMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTGH----GLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVS 676
Q QR + Q G GL +QR + P + G G+++PG++ +G+ P VS
Sbjct: 60 QL--QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKH---PNVS 113
Query: 677 ARVDQPKNGPVTGKA-MEQETINYSTSFSQVNRALEMSSGSQM-GAGFRG---------- 820
AR + + P + M + +S SQ E + Q+ GF+G
Sbjct: 114 ARYPEKEEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGI 173
Query: 821 DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPV 1000
DP+ P K++ P + SG G +P NQ NHPV+N N+V P+
Sbjct: 174 DPSGVPQKIAND-----PAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNE--NQVQPPI 226
Query: 1001 IGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYD 1180
NGPT++ VGEL WWTTDAELES LSQYGR+KEI FFDE+ASGKSKGYC+VEFYD
Sbjct: 227 -----ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYD 281
Query: 1181 PVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXX 1360
P +AA CK GMNG +FNGRACVV FAS +TLKQMG+ YM +NQ Q+Q
Sbjct: 282 PSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNEGLG 341
Query: 1361 XXXXXXXXXXXXXNYGNKAGWGRGGQG----------MPXXXXXXXXXXXXXXXXXPKGI 1510
+ GWGRGGQG M G
Sbjct: 342 RGGNLNYQSGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401
Query: 1511 MGMGAQFGQGL------TAPAMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXX 1672
G GA +GQG A MMHPQ +M GFD
Sbjct: 402 NGAGA-YGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFP 460
Query: 1673 TMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-R 1846
+N +GL GVAPHVNPAFFGRGM NGMG++G+SGMDG GMW D M GW +E G R
Sbjct: 461 AVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRR 520
Query: 1847 TKEXXXXXXXXXXXXXXXEATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRDR 2026
T+E +A E+G S ASREK+ SER+WSG+S R+H + +EQD DR
Sbjct: 521 TRESSYGGEDGASEYGYGDANHEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDR 580
Query: 2027 SNVD----RHSEGKDVYRDH 2074
S + R+ E KD YR+H
Sbjct: 581 SEREHREHRYREEKDSYREH 600
>XP_007044903.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X3 [Theobroma cacao] XP_017971403.1 PREDICTED:
cleavage and polyadenylation specificity factor subunit 6
isoform X3 [Theobroma cacao] XP_017971405.1 PREDICTED:
cleavage and polyadenylation specificity factor subunit 6
isoform X3 [Theobroma cacao] XP_017971406.1 PREDICTED:
cleavage and polyadenylation specificity factor subunit 6
isoform X3 [Theobroma cacao] EOY00734.1 RNA-binding
family protein isoform 1 [Theobroma cacao] EOY00735.1
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 372 bits (956), Expect = e-115
Identities = 241/621 (38%), Positives = 313/621 (50%), Gaps = 39/621 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+D+GD EYGG+ K+QY G+ G I GFL
Sbjct: 1 MDAMAEEQIDFGDEEYGGAQKMQYQGS-GAIPALADEEMMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTGH----GLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVS 676
Q QR + PQ G GL +Q+ + P + G G+++PG++ +G+ V+
Sbjct: 60 QL--QRSEAPPQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGKHLN---VT 113
Query: 677 ARVDQPKNGPVTGKA-MEQETINYSTSFSQVNRALEMSSGSQM-GAGFRG---------- 820
AR + P + M + TS SQ R +E + +Q+ GF+G
Sbjct: 114 ARYPEQDGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGI 173
Query: 821 DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPV 1000
DP+ P K++ P + SG G A +P NQ NHP+I+ N+V P+
Sbjct: 174 DPSGVPQKIANV-----PAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISE--NQVRPPI 226
Query: 1001 IGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYD 1180
NGPT++ VGEL WWTTDAELES LSQYGRVKEI FFDERASGKSKGYC+VEFYD
Sbjct: 227 -----ENGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD 281
Query: 1181 PVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXX 1360
P +AA+CK GM+G +FNGRACVV FAS +TLKQMG+ YM +NQ Q+Q
Sbjct: 282 PASAAACKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNDGLG 341
Query: 1361 XXXXXXXXXXXXXNYGNKAGWGRGGQGMPXXXXXXXXXXXXXXXXXPKGIMGM------- 1519
+ GWGRGGQG+ K ++G
Sbjct: 342 RGGNMNYQSGDAGRNYGRGGWGRGGQGV-VNRSGVGGPMRGRGGVGVKNMVGSSAGVGNG 400
Query: 1520 ---GAQFGQGLTAP-------AMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXX 1669
GA +GQG P MMHPQ +M GFD
Sbjct: 401 ANGGAAYGQGPAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSF 460
Query: 1670 XTMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG- 1843
+N +GL GVAPHVNPAFFGRGM NGMG++G GMDG GMW D M GW +E G
Sbjct: 461 PAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGR 520
Query: 1844 RTKEXXXXXXXXXXXXXXXEATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRD 2023
RT+E +A E+G S ASREK+ S+R+WSG+S R+H + +E+D D
Sbjct: 521 RTRESSYGGEDGASEYGYGDANHEKGRSSGASREKERVSDREWSGNSDRRHRDEKERDWD 580
Query: 2024 RSNVD----RHSEGKDVYRDH 2074
RS + R+ E KD YR+H
Sbjct: 581 RSEREHREHRYREEKDSYREH 601
>XP_017971402.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X2 [Theobroma cacao]
Length = 660
Score = 372 bits (956), Expect = e-115
Identities = 241/621 (38%), Positives = 313/621 (50%), Gaps = 39/621 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+D+GD EYGG+ K+QY G+ G I GFL
Sbjct: 8 MDAMAEEQIDFGDEEYGGAQKMQYQGS-GAIPALADEEMMGEDDEYDDLYNDVNVGEGFL 66
Query: 509 QTMEQRHVSAPQTGH----GLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVS 676
Q QR + PQ G GL +Q+ + P + G G+++PG++ +G+ V+
Sbjct: 67 QL--QRSEAPPQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGKHLN---VT 120
Query: 677 ARVDQPKNGPVTGKA-MEQETINYSTSFSQVNRALEMSSGSQM-GAGFRG---------- 820
AR + P + M + TS SQ R +E + +Q+ GF+G
Sbjct: 121 ARYPEQDGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGI 180
Query: 821 DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPV 1000
DP+ P K++ P + SG G A +P NQ NHP+I+ N+V P+
Sbjct: 181 DPSGVPQKIANV-----PAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISE--NQVRPPI 233
Query: 1001 IGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYD 1180
NGPT++ VGEL WWTTDAELES LSQYGRVKEI FFDERASGKSKGYC+VEFYD
Sbjct: 234 -----ENGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD 288
Query: 1181 PVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXX 1360
P +AA+CK GM+G +FNGRACVV FAS +TLKQMG+ YM +NQ Q+Q
Sbjct: 289 PASAAACKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNDGLG 348
Query: 1361 XXXXXXXXXXXXXNYGNKAGWGRGGQGMPXXXXXXXXXXXXXXXXXPKGIMGM------- 1519
+ GWGRGGQG+ K ++G
Sbjct: 349 RGGNMNYQSGDAGRNYGRGGWGRGGQGV-VNRSGVGGPMRGRGGVGVKNMVGSSAGVGNG 407
Query: 1520 ---GAQFGQGLTAP-------AMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXX 1669
GA +GQG P MMHPQ +M GFD
Sbjct: 408 ANGGAAYGQGPAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSF 467
Query: 1670 XTMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG- 1843
+N +GL GVAPHVNPAFFGRGM NGMG++G GMDG GMW D M GW +E G
Sbjct: 468 PAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGR 527
Query: 1844 RTKEXXXXXXXXXXXXXXXEATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRD 2023
RT+E +A E+G S ASREK+ S+R+WSG+S R+H + +E+D D
Sbjct: 528 RTRESSYGGEDGASEYGYGDANHEKGRSSGASREKERVSDREWSGNSDRRHRDEKERDWD 587
Query: 2024 RSNVD----RHSEGKDVYRDH 2074
RS + R+ E KD YR+H
Sbjct: 588 RSEREHREHRYREEKDSYREH 608
>XP_017971401.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X1 [Theobroma cacao]
Length = 700
Score = 372 bits (956), Expect = e-115
Identities = 241/621 (38%), Positives = 313/621 (50%), Gaps = 39/621 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+D+GD EYGG+ K+QY G+ G I GFL
Sbjct: 48 MDAMAEEQIDFGDEEYGGAQKMQYQGS-GAIPALADEEMMGEDDEYDDLYNDVNVGEGFL 106
Query: 509 QTMEQRHVSAPQTGH----GLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVS 676
Q QR + PQ G GL +Q+ + P + G G+++PG++ +G+ V+
Sbjct: 107 QL--QRSEAPPQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGKHLN---VT 160
Query: 677 ARVDQPKNGPVTGKA-MEQETINYSTSFSQVNRALEMSSGSQM-GAGFRG---------- 820
AR + P + M + TS SQ R +E + +Q+ GF+G
Sbjct: 161 ARYPEQDGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGI 220
Query: 821 DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPV 1000
DP+ P K++ P + SG G A +P NQ NHP+I+ N+V P+
Sbjct: 221 DPSGVPQKIANV-----PAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISE--NQVRPPI 273
Query: 1001 IGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYD 1180
NGPT++ VGEL WWTTDAELES LSQYGRVKEI FFDERASGKSKGYC+VEFYD
Sbjct: 274 -----ENGPTMLFVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYD 328
Query: 1181 PVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXX 1360
P +AA+CK GM+G +FNGRACVV FAS +TLKQMG+ YM +NQ Q+Q
Sbjct: 329 PASAAACKEGMDGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNDGLG 388
Query: 1361 XXXXXXXXXXXXXNYGNKAGWGRGGQGMPXXXXXXXXXXXXXXXXXPKGIMGM------- 1519
+ GWGRGGQG+ K ++G
Sbjct: 389 RGGNMNYQSGDAGRNYGRGGWGRGGQGV-VNRSGVGGPMRGRGGVGVKNMVGSSAGVGNG 447
Query: 1520 ---GAQFGQGLTAP-------AMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXX 1669
GA +GQG P MMHPQ +M GFD
Sbjct: 448 ANGGAAYGQGPAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSF 507
Query: 1670 XTMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG- 1843
+N +GL GVAPHVNPAFFGRGM NGMG++G GMDG GMW D M GW +E G
Sbjct: 508 PAVNTLGLAGVAPHVNPAFFGRGMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGR 567
Query: 1844 RTKEXXXXXXXXXXXXXXXEATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRD 2023
RT+E +A E+G S ASREK+ S+R+WSG+S R+H + +E+D D
Sbjct: 568 RTRESSYGGEDGASEYGYGDANHEKGRSSGASREKERVSDREWSGNSDRRHRDEKERDWD 627
Query: 2024 RSNVD----RHSEGKDVYRDH 2074
RS + R+ E KD YR+H
Sbjct: 628 RSEREHREHRYREEKDSYREH 648
>EOY00736.1 RNA-binding family protein isoform 1 [Theobroma cacao] EOY00737.1
RNA-binding family protein isoform 1 [Theobroma cacao]
EOY00738.1 RNA-binding family protein isoform 1
[Theobroma cacao]
Length = 652
Score = 371 bits (952), Expect = e-115
Identities = 244/620 (39%), Positives = 308/620 (49%), Gaps = 38/620 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+D+GD EYGG K+QY G+ G I GFL
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGS-GAIPALADEEMMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTGH----GLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVS 676
Q QR + Q G GL +QR + P + G G+++PG++ +G+ P VS
Sbjct: 60 QL--QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKH---PNVS 113
Query: 677 ARVDQPKNGPVTGKA-MEQETINYSTSFSQVNRALEMSSGSQM-GAGFRG---------- 820
AR + + P + M + +S SQ E + Q+ GF+G
Sbjct: 114 ARYPEKEEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGI 173
Query: 821 DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPV 1000
DP+ P K++ P + SG G +P NQ NHPV+N N+V P+
Sbjct: 174 DPSGVPQKIAND-----PAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNE--NQVQPPI 226
Query: 1001 IGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYD 1180
NGPT++ VGEL WWTTDAELES LSQYGR+KEI FFDE+ASGKSKGYC+VEFYD
Sbjct: 227 -----ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYD 281
Query: 1181 PVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXX 1360
P +AA CK GMNG +FNGRACVV FAS +TLKQMG+ YM +NQ Q+Q
Sbjct: 282 PSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNEGLG 341
Query: 1361 XXXXXXXXXXXXXNYGNKAGWGRGGQG----------MPXXXXXXXXXXXXXXXXXPKGI 1510
+ GWGRGGQG M G
Sbjct: 342 RGGNLNYQSGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401
Query: 1511 MGMGAQFGQGL------TAPAMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXX 1672
G GA +GQG A MMHPQ +M GFD
Sbjct: 402 NGAGA-YGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFP 460
Query: 1673 TMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-R 1846
+N +GL GVAPHVNPAFFGRGM NGMG++G+SGMDG GMW D M GW +E G R
Sbjct: 461 AVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRR 520
Query: 1847 TKEXXXXXXXXXXXXXXXEATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRDR 2026
T+E +A E+G S ASREK+ SER+WSG+S R+H + +EQD DR
Sbjct: 521 TRESSYGGEDGASEYGYGDANHEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDR 580
Query: 2027 SNVD----RHSEGKDVYRDH 2074
S + R+ E KD YR+H
Sbjct: 581 SEREHREHRYREEKDSYREH 600
>EOY00740.1 RNA-binding family protein isoform 5, partial [Theobroma cacao]
Length = 656
Score = 371 bits (952), Expect = e-115
Identities = 244/620 (39%), Positives = 308/620 (49%), Gaps = 38/620 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+D+GD EYGG K+QY G+ G I GFL
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGS-GAIPALADEEMMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTGH----GLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVS 676
Q QR + Q G GL +QR + P + G G+++PG++ +G+ P VS
Sbjct: 60 QL--QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKH---PNVS 113
Query: 677 ARVDQPKNGPVTGKA-MEQETINYSTSFSQVNRALEMSSGSQM-GAGFRG---------- 820
AR + + P + M + +S SQ E + Q+ GF+G
Sbjct: 114 ARYPEKEEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGI 173
Query: 821 DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPV 1000
DP+ P K++ P + SG G +P NQ NHPV+N N+V P+
Sbjct: 174 DPSGVPQKIAND-----PAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNE--NQVQPPI 226
Query: 1001 IGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYD 1180
NGPT++ VGEL WWTTDAELES LSQYGR+KEI FFDE+ASGKSKGYC+VEFYD
Sbjct: 227 -----ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYD 281
Query: 1181 PVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXX 1360
P +AA CK GMNG +FNGRACVV FAS +TLKQMG+ YM +NQ Q+Q
Sbjct: 282 PSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNEGLG 341
Query: 1361 XXXXXXXXXXXXXNYGNKAGWGRGGQG----------MPXXXXXXXXXXXXXXXXXPKGI 1510
+ GWGRGGQG M G
Sbjct: 342 RGGNLNYQSGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401
Query: 1511 MGMGAQFGQGL------TAPAMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXX 1672
G GA +GQG A MMHPQ +M GFD
Sbjct: 402 NGAGA-YGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFP 460
Query: 1673 TMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-R 1846
+N +GL GVAPHVNPAFFGRGM NGMG++G+SGMDG GMW D M GW +E G R
Sbjct: 461 AVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRR 520
Query: 1847 TKEXXXXXXXXXXXXXXXEATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRDR 2026
T+E +A E+G S ASREK+ SER+WSG+S R+H + +EQD DR
Sbjct: 521 TRESSYGGEDGASEYGYGDANHEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDR 580
Query: 2027 SNVD----RHSEGKDVYRDH 2074
S + R+ E KD YR+H
Sbjct: 581 SEREHREHRYREEKDSYREH 600
>XP_008389756.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica] XP_017192498.1 PREDICTED:
cleavage and polyadenylation specificity factor subunit
6-like [Malus domestica]
Length = 658
Score = 370 bits (949), Expect = e-114
Identities = 248/623 (39%), Positives = 323/623 (51%), Gaps = 41/623 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD +G+EQ+DY D EYGGS K+QY G+ G I GF+
Sbjct: 1 MDPMGDEQIDYEDEEYGGSQKLQYQGS-GAISALADEEPMVEDDEYDDLYNDVNVGEGFM 59
Query: 509 QTMEQRHVSAPQTG---HGLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVSA 679
Q M + P G GL +Q+ + P A GV + +PG++ +G+ + G A
Sbjct: 60 Q-MHRSEAPVPPGGVGNGGLQAQKTNVPEPR-ARAGVSQDLKIPGVSVQGKYS---GAGA 114
Query: 680 RVDQPKNGPVTGKAMEQETINY--STSFSQVNRALEMSSGSQMGA-GFRGDPTHPP-LKV 847
+ + +N P K E + Y S SQ R +EM+ +Q+ GF+G T PP + +
Sbjct: 115 QFPE-QNQPPVAKEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTIPPNVGI 173
Query: 848 SGPMLTSR------PLLTPESGISGKLNAAPLPTNQTSAV--GNHPVINPVINEVSRPVI 1003
+T + P L P G +G AA +PTNQ S N P++N N++ P+
Sbjct: 174 DSSDITGKGNSEYIPSLNP--GTAGPPGAAQIPTNQMSIKINANRPMVNE--NQIRPPI- 228
Query: 1004 GSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYDP 1183
NG ++ VGEL WWTTDAE+ES LSQYGRVKEI FFDERASGKSKGYC+VEF+DP
Sbjct: 229 ----ENGSAMLFVGELHWWTTDAEIESXLSQYGRVKEIKFFDERASGKSKGYCQVEFHDP 284
Query: 1184 VAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQ---XXXXXXXXX 1354
AA +CK GM+G VFNGRACVV FAS +TLKQMG+ Y+ ++Q Q+Q
Sbjct: 285 AAATACKEGMDGYVFNGRACVVAFASPQTLKQMGASYLSKSQXQAQAQQPGRRPMNDGVG 344
Query: 1355 XXXXXXXXXXXXXXXNYGNKAGWGRGGQ------GMPXXXXXXXXXXXXXXXXXPKGIMG 1516
N+G + GWGRGGQ G P G+ G
Sbjct: 345 RGAGVNFQAGDTGGRNFG-RGGWGRGGQGGRGPGGGGPMRGRGGAMGVKNMVGNPAGV-G 402
Query: 1517 MGAQ---FGQGLTAP------AMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXX 1669
GA +GQGL P MM+PQ +M +GFD
Sbjct: 403 TGANGGGYGQGLGGPGFGGPVGMMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQF 462
Query: 1670 XTMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGMG-WTAEEPG- 1843
+N +GL GVAPHVNPAFFGRGM NGMG++GSSGM+G+ GMW DP MG W EE G
Sbjct: 463 PGVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGSSGMEGHHAGMWNDPSMGAWGGEEHGR 522
Query: 1844 RTKEXXXXXXXXXXXXXXXEATQERGGRSN-ASREKDVGSERDWSGSSGRKHSENREQDR 2020
RT+E + E+G RS+ ASRE++ GSERDWSG+S R+H + REQD
Sbjct: 523 RTRESSYGGDDNASEYGYGDTNNEKGARSSAASRERERGSERDWSGNSERRHRDGREQDF 582
Query: 2021 DRS-----NVDRHSEGKDVYRDH 2074
+RS R+ E KD YR+H
Sbjct: 583 ERSERGEHREHRYKEEKDSYREH 605
>EOY00739.1 RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 697
Score = 371 bits (952), Expect = e-114
Identities = 244/620 (39%), Positives = 308/620 (49%), Gaps = 38/620 (6%)
Frame = +2
Query: 329 MDHIGEEQLDYGDGEYGGSHKVQYHGNQGGIHXXXXXXXXXXXXXXXXXXXXXXXXXGFL 508
MD + EEQ+D+GD EYGG K+QY G+ G I GFL
Sbjct: 1 MDAMAEEQIDFGDEEYGGGQKMQYQGS-GAIPALADEEMMGEDDEYDDLYNDVNVGEGFL 59
Query: 509 QTMEQRHVSAPQTGH----GLSSQRIDGPGVNTADHGVLVGMSMPGIATEGRDNRMPGVS 676
Q QR + Q G GL +QR + P + G G+++PG++ +G+ P VS
Sbjct: 60 QL--QRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKH---PNVS 113
Query: 677 ARVDQPKNGPVTGKA-MEQETINYSTSFSQVNRALEMSSGSQM-GAGFRG---------- 820
AR + + P + M + +S SQ E + Q+ GF+G
Sbjct: 114 ARYPEKEEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGI 173
Query: 821 DPTHPPLKVSGPMLTSRPLLTPESGISGKLNAAPLPTNQTSAVGNHPVINPVINEVSRPV 1000
DP+ P K++ P + SG G +P NQ NHPV+N N+V P+
Sbjct: 174 DPSGVPQKIAND-----PAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNE--NQVQPPI 226
Query: 1001 IGSIDSNGPTVILVGELQWWTTDAELESALSQYGRVKEINFFDERASGKSKGYCKVEFYD 1180
NGPT++ VGEL WWTTDAELES LSQYGR+KEI FFDE+ASGKSKGYC+VEFYD
Sbjct: 227 -----ENGPTMLFVGELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYD 281
Query: 1181 PVAAASCKAGMNGCVFNGRACVVTFASAETLKQMGSGYMKRNQIPVQSQXXXXXXXXXXX 1360
P +AA CK GMNG +FNGRACVV FAS +TLKQMG+ YM +NQ Q+Q
Sbjct: 282 PSSAAVCKEGMNGYMFNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRRPNEGLG 341
Query: 1361 XXXXXXXXXXXXXNYGNKAGWGRGGQG----------MPXXXXXXXXXXXXXXXXXPKGI 1510
+ GWGRGGQG M G
Sbjct: 342 RGGNLNYQSGDAGRNYGRGGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGA 401
Query: 1511 MGMGAQFGQGL------TAPAMMHPQNIMATGFDXXXXXXXXXXXXXXXXXXXXXXXXXX 1672
G GA +GQG A MMHPQ +M GFD
Sbjct: 402 NGAGA-YGQGPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFP 460
Query: 1673 TMNPVGLPGVAPHVNPAFFGRGMMQNGMGLIGSSGMDGNSTGMWGDPGM-GWTAEEPG-R 1846
+N +GL GVAPHVNPAFFGRGM NGMG++G+SGMDG GMW D M GW +E G R
Sbjct: 461 AVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRR 520
Query: 1847 TKEXXXXXXXXXXXXXXXEATQERGGRSNASREKDVGSERDWSGSSGRKHSENREQDRDR 2026
T+E +A E+G S ASREK+ SER+WSG+S R+H + +EQD DR
Sbjct: 521 TRESSYGGEDGASEYGYGDANHEKGRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDR 580
Query: 2027 SNVD----RHSEGKDVYRDH 2074
S + R+ E KD YR+H
Sbjct: 581 SEREHREHRYREEKDSYREH 600