BLASTX nr result
ID: Alisma22_contig00000790
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00000790
(1043 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010260084.1 PREDICTED: cold-inducible RNA-binding protein-lik... 112 7e-27
JAU39290.1 Cold-inducible RNA-binding protein, partial [Noccaea ... 111 7e-27
XP_006649858.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 111 1e-26
XP_010483634.1 PREDICTED: cold-inducible RNA-binding protein-lik... 110 2e-26
JAU93503.1 Cold-inducible RNA-binding protein, partial [Noccaea ... 112 2e-26
XP_010455682.1 PREDICTED: cold-inducible RNA-binding protein-lik... 110 2e-26
XP_015620978.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 110 2e-26
XP_006848599.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 110 3e-26
XP_013681048.1 PREDICTED: cold-inducible RNA-binding protein-lik... 109 5e-26
XP_009126650.1 PREDICTED: cold-inducible RNA-binding protein [Br... 109 6e-26
XP_002864655.1 predicted protein [Arabidopsis lyrata subsp. lyra... 108 1e-25
XP_010426030.1 PREDICTED: cold-inducible RNA-binding protein-lik... 108 1e-25
XP_010112904.1 Cold-inducible RNA-binding protein [Morus notabil... 107 1e-25
XP_020086418.1 glycine-rich RNA-binding protein 4, mitochondrial... 108 1e-25
XP_019102255.1 PREDICTED: cold-inducible RNA-binding protein-lik... 107 2e-25
XP_010503216.1 PREDICTED: cold-inducible RNA-binding protein-lik... 107 3e-25
XP_003575643.1 PREDICTED: glycine-rich RNA-binding protein 4, mi... 107 3e-25
KFK27526.1 hypothetical protein AALP_AA8G394900 [Arabis alpina] 107 3e-25
XP_006279867.1 hypothetical protein CARUB_v10028559mg [Capsella ... 107 3e-25
OAP03426.1 hypothetical protein AXX17_AT3G39880 [Arabidopsis tha... 107 4e-25
>XP_010260084.1 PREDICTED: cold-inducible RNA-binding protein-like [Nelumbo
nucifera]
Length = 116
Score = 112 bits (279), Expect = 7e-27
Identities = 53/92 (57%), Positives = 73/92 (79%)
Frame = +3
Query: 411 RGFSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEAN 590
R FSS +FVSRLSSYT ++ L+ LFS FGI+KEARL++D T+RPKGFGFV Y++E EA
Sbjct: 24 RKFSSQLFVSRLSSYTTDKELKKLFSSFGIVKEARLVKDPRTQRPKGFGFVTYESENEAQ 83
Query: 591 RAVQAMNYKIINGRLIFVEIAKDIPESNKETS 686
+A++AMN ++++GRLIFVE+AK K+ +
Sbjct: 84 KALKAMNGRMVDGRLIFVEVAKTSTHKEKKAT 115
>JAU39290.1 Cold-inducible RNA-binding protein, partial [Noccaea caerulescens]
Length = 108
Score = 111 bits (278), Expect = 7e-27
Identities = 54/94 (57%), Positives = 75/94 (79%)
Frame = +3
Query: 387 FMHVFCPQRGFSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVE 566
F+ V + F++ +FVSRLS+YT E SLR LFSPFG IK+ARLIRD T+RPKGFGFV
Sbjct: 1 FVLVLIMAKRFATQLFVSRLSAYTTEPSLRQLFSPFGQIKDARLIRDPETQRPKGFGFVT 60
Query: 567 YQNEAEANRAVQAMNYKIINGRLIFVEIAKDIPE 668
Y++E +A +A+++++ KI++GRLIFVE+AK+ E
Sbjct: 61 YESEDDARKAIKSLDGKIVDGRLIFVEVAKNAEE 94
>XP_006649858.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Oryza brachyantha]
Length = 105
Score = 111 bits (277), Expect = 1e-26
Identities = 52/83 (62%), Positives = 70/83 (84%)
Frame = +3
Query: 411 RGFSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEAN 590
+ FS+ IFVSRLS YT EE L+++F+PFG ++EARL+RD T RPKGFGFV+Y ++AEA
Sbjct: 19 KSFSTEIFVSRLSFYTTEEELKNIFTPFGAVEEARLVRDNQTGRPKGFGFVKYSSQAEAE 78
Query: 591 RAVQAMNYKIINGRLIFVEIAKD 659
+AV+AM+ +I+ GRLIFVEIAK+
Sbjct: 79 KAVKAMDGRILRGRLIFVEIAKE 101
>XP_010483634.1 PREDICTED: cold-inducible RNA-binding protein-like [Camelina
sativa]
Length = 98
Score = 110 bits (275), Expect = 2e-26
Identities = 53/92 (57%), Positives = 76/92 (82%), Gaps = 2/92 (2%)
Frame = +3
Query: 417 FSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRA 596
F++ + VSRL++YT ++SLR LFSPFG I EARLIRD++T+RPKGFGFV +++E +A +A
Sbjct: 5 FTAQLLVSRLAAYTTDQSLRQLFSPFGQITEARLIRDQLTQRPKGFGFVTFKSEDDAQKA 64
Query: 597 VQAMNYKIINGRLIFVEIAKDI--PESNKETS 686
+QA+N KI+NGRLIFVE AK + P +N +++
Sbjct: 65 LQALNGKIVNGRLIFVETAKKVEAPTTNTKSN 96
>JAU93503.1 Cold-inducible RNA-binding protein, partial [Noccaea caerulescens]
Length = 147
Score = 112 bits (279), Expect = 2e-26
Identities = 54/97 (55%), Positives = 76/97 (78%)
Frame = +3
Query: 378 IKKFMHVFCPQRGFSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFG 557
+ F+ V + F++ +FVSRLS+YT E SLR LFSPFG IK+ARLIRD T+RPKGFG
Sbjct: 37 LNHFVVVLIMAKRFATQLFVSRLSAYTTEPSLRQLFSPFGQIKDARLIRDPETQRPKGFG 96
Query: 558 FVEYQNEAEANRAVQAMNYKIINGRLIFVEIAKDIPE 668
FV Y++E +A +A+++++ KI++GRLIFVE+AK+ E
Sbjct: 97 FVTYESEDDARKAIKSLDGKIVDGRLIFVEVAKNAEE 133
>XP_010455682.1 PREDICTED: cold-inducible RNA-binding protein-like [Camelina
sativa]
Length = 116
Score = 110 bits (276), Expect = 2e-26
Identities = 52/89 (58%), Positives = 73/89 (82%)
Frame = +3
Query: 417 FSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRA 596
F++ +FVSRLS+YT ++SLR LFSPFG I EARLIRD++T+RPKGFGFV +++E +A +A
Sbjct: 23 FTAQLFVSRLSAYTTDQSLRQLFSPFGQITEARLIRDQLTQRPKGFGFVTFKSEDDAQKA 82
Query: 597 VQAMNYKIINGRLIFVEIAKDIPESNKET 683
++A+N KI++GRLIFVE AK++ T
Sbjct: 83 LKALNGKIVDGRLIFVESAKEVEPPTTNT 111
>XP_015620978.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Oryza
sativa Japonica Group]
Length = 120
Score = 110 bits (276), Expect = 2e-26
Identities = 53/81 (65%), Positives = 69/81 (85%)
Frame = +3
Query: 417 FSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRA 596
FS+ IFVSRLS YT EE L+++FSPFG ++EARL+RD T RPKGFGFV+Y ++A+A +A
Sbjct: 40 FSTEIFVSRLSFYTTEEELKNVFSPFGAVEEARLVRDNQTGRPKGFGFVKYSSQADAEKA 99
Query: 597 VQAMNYKIINGRLIFVEIAKD 659
V+AM+ +II GRLIFVEIAK+
Sbjct: 100 VKAMDGRIIRGRLIFVEIAKE 120
>XP_006848599.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Amborella trichopoda] ERN10180.1 hypothetical protein
AMTR_s00168p00066520 [Amborella trichopoda]
Length = 125
Score = 110 bits (275), Expect = 3e-26
Identities = 54/95 (56%), Positives = 72/95 (75%)
Frame = +3
Query: 411 RGFSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEAN 590
RGFSS +FVSRLS Y+ E+SL+ FSPFG + EARL+ DK T RPKG+GF+ YQ+E EA
Sbjct: 28 RGFSSELFVSRLSFYSTEQSLKDAFSPFGEVIEARLVIDKATLRPKGYGFIRYQSEIEAQ 87
Query: 591 RAVQAMNYKIINGRLIFVEIAKDIPESNKETS*VV 695
+A++AM+ + + GRLIFVE+AK PE + S V+
Sbjct: 88 KAMKAMDGRFLGGRLIFVEVAKPRPEVGDDASQVM 122
>XP_013681048.1 PREDICTED: cold-inducible RNA-binding protein-like [Brassica napus]
CDY09244.1 BnaA02g06700D [Brassica napus]
Length = 104
Score = 109 bits (272), Expect = 5e-26
Identities = 51/82 (62%), Positives = 70/82 (85%)
Frame = +3
Query: 417 FSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRA 596
F++ +FVSRLS YT ++SLR LFSPFG IKEARLI+D T+RPKGFGFV +++E +A +A
Sbjct: 5 FTTQLFVSRLSGYTTDQSLRQLFSPFGQIKEARLIKDSQTQRPKGFGFVTFESEDDAQKA 64
Query: 597 VQAMNYKIINGRLIFVEIAKDI 662
++A++ KI++GRLIFVE AKD+
Sbjct: 65 MKALDGKIVDGRLIFVEAAKDV 86
>XP_009126650.1 PREDICTED: cold-inducible RNA-binding protein [Brassica rapa]
Length = 110
Score = 109 bits (272), Expect = 6e-26
Identities = 51/82 (62%), Positives = 70/82 (85%)
Frame = +3
Query: 417 FSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRA 596
F++ +FVSRLS YT ++SLR LFSPFG IKEARLI+D T+RPKGFGFV +++E +A +A
Sbjct: 5 FTTQLFVSRLSGYTTDQSLRQLFSPFGQIKEARLIKDSQTQRPKGFGFVTFESEDDAQKA 64
Query: 597 VQAMNYKIINGRLIFVEIAKDI 662
++A++ KI++GRLIFVE AKD+
Sbjct: 65 MKALDGKIVDGRLIFVEAAKDV 86
>XP_002864655.1 predicted protein [Arabidopsis lyrata subsp. lyrata] EFH40914.1
predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 95
Score = 108 bits (269), Expect = 1e-25
Identities = 50/82 (60%), Positives = 70/82 (85%)
Frame = +3
Query: 417 FSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRA 596
F++ +FVSRLS+YT ++SLR LF+PFG I EARLIRD+ T+RPKGFGF+ +++E +A A
Sbjct: 5 FTTQLFVSRLSAYTTDQSLRQLFAPFGQIIEARLIRDQQTQRPKGFGFITFESEDDAQNA 64
Query: 597 VQAMNYKIINGRLIFVEIAKDI 662
++A+N KI+NGRLIFVE AK++
Sbjct: 65 LKALNGKIVNGRLIFVEAAKEV 86
>XP_010426030.1 PREDICTED: cold-inducible RNA-binding protein-like [Camelina
sativa]
Length = 119
Score = 108 bits (271), Expect = 1e-25
Identities = 51/84 (60%), Positives = 71/84 (84%)
Frame = +3
Query: 417 FSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRA 596
FS+ +FVSRLS+YT ++SLR LFSPFG IKEARLIRD T+RPKGFGF+ +++E +A +A
Sbjct: 5 FSAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDPETQRPKGFGFITFESEDDARKA 64
Query: 597 VQAMNYKIINGRLIFVEIAKDIPE 668
+++++ KI++GRLIFVE+AK E
Sbjct: 65 LKSLDGKIVDGRLIFVEVAKKAEE 88
>XP_010112904.1 Cold-inducible RNA-binding protein [Morus notabilis] EXC35053.1
Cold-inducible RNA-binding protein [Morus notabilis]
Length = 94
Score = 107 bits (268), Expect = 1e-25
Identities = 53/89 (59%), Positives = 68/89 (76%)
Frame = +3
Query: 420 SSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRAV 599
SS +FVSRLSSYT E L+ LFSPFG + EARL+ D T+RPKGFGFV Y++E EA +A+
Sbjct: 6 SSQLFVSRLSSYTTNEHLKKLFSPFGEVLEARLVLDSKTQRPKGFGFVTYESEVEAQKAL 65
Query: 600 QAMNYKIINGRLIFVEIAKDIPESNKETS 686
+AMN +I++GRLIFVE+AK + TS
Sbjct: 66 KAMNGRIVDGRLIFVEVAKTSKPGEEATS 94
>XP_020086418.1 glycine-rich RNA-binding protein 4, mitochondrial-like [Ananas
comosus]
Length = 106
Score = 108 bits (269), Expect = 1e-25
Identities = 58/102 (56%), Positives = 73/102 (71%)
Frame = +3
Query: 351 MGSLRCRSTIKKFMHVFCPQRGFSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDK 530
M + R RS + + F +R F S IFVSRLS YT EE R F+PFG I+EARLIRD
Sbjct: 4 MAAGRVRSQVSRG---FLNRREFGSEIFVSRLSFYTTEEEFRKAFAPFGTIEEARLIRDA 60
Query: 531 ITRRPKGFGFVEYQNEAEANRAVQAMNYKIINGRLIFVEIAK 656
T+RPKG+GFV Y +EAEA +A++AM+ ++I GRLIFVE AK
Sbjct: 61 RTQRPKGYGFVLYASEAEAQKAIKAMDGRVIGGRLIFVEAAK 102
>XP_019102255.1 PREDICTED: cold-inducible RNA-binding protein-like [Camelina
sativa]
Length = 88
Score = 107 bits (267), Expect = 2e-25
Identities = 50/79 (63%), Positives = 69/79 (87%)
Frame = +3
Query: 420 SSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRAV 599
S+ +FVSRLS+YT ++SLR LFSPFG IKEARLIRD T+RPKGFGF+ Y++E +A +A+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDPETQRPKGFGFITYESEDDARKAM 65
Query: 600 QAMNYKIINGRLIFVEIAK 656
++++ KI++GRLIFVE+AK
Sbjct: 66 KSLDGKIVDGRLIFVEVAK 84
>XP_010503216.1 PREDICTED: cold-inducible RNA-binding protein-like [Camelina
sativa]
Length = 102
Score = 107 bits (267), Expect = 3e-25
Identities = 50/89 (56%), Positives = 73/89 (82%)
Frame = +3
Query: 420 SSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRAV 599
S+ +FVSRLS+YT ++SLR LFSPFG IKEARLIRD T+RPKGFGF+ +++E +A +A+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDPETQRPKGFGFITFESEDDARKAL 65
Query: 600 QAMNYKIINGRLIFVEIAKDIPESNKETS 686
++++ +I++GRLIFVE+AK E +T+
Sbjct: 66 KSLDGRIVDGRLIFVEVAKKAEEVTTDTN 94
>XP_003575643.1 PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Brachypodium distachyon] XP_014757643.1 PREDICTED:
glycine-rich RNA-binding protein 4, mitochondrial-like
[Brachypodium distachyon] KQJ86415.1 hypothetical
protein BRADI_4g05350 [Brachypodium distachyon]
KQJ86416.1 hypothetical protein BRADI_4g05350
[Brachypodium distachyon] KQJ86417.1 hypothetical
protein BRADI_4g05350 [Brachypodium distachyon]
Length = 108
Score = 107 bits (267), Expect = 3e-25
Identities = 51/83 (61%), Positives = 68/83 (81%)
Frame = +3
Query: 411 RGFSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEAN 590
+GFS+ IFVS+LS YT EE L+++FSPFG I+EARL+RD T RPKGFGFV+Y ++ A
Sbjct: 22 KGFSTEIFVSKLSFYTTEEELKNIFSPFGAIEEARLMRDNQTGRPKGFGFVKYSSQVAAE 81
Query: 591 RAVQAMNYKIINGRLIFVEIAKD 659
+AV+AM+ +II GR+IFVE AK+
Sbjct: 82 KAVKAMDGRIIRGRIIFVETAKE 104
>KFK27526.1 hypothetical protein AALP_AA8G394900 [Arabis alpina]
Length = 98
Score = 107 bits (266), Expect = 3e-25
Identities = 50/81 (61%), Positives = 70/81 (86%)
Frame = +3
Query: 420 SSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRAV 599
+S +FVSRLS+YT +ESLR LFSPFG+I +ARLIRD T+RPKGFGFV +++E +A +A+
Sbjct: 6 ASQLFVSRLSAYTTDESLRQLFSPFGLITQARLIRDSRTQRPKGFGFVTFESEDDAQKAL 65
Query: 600 QAMNYKIINGRLIFVEIAKDI 662
+A++ KI++GRLIFVE AK++
Sbjct: 66 KALDGKIVDGRLIFVEPAKEV 86
>XP_006279867.1 hypothetical protein CARUB_v10028559mg [Capsella rubella]
EOA12765.1 hypothetical protein CARUB_v10028559mg
[Capsella rubella]
Length = 98
Score = 107 bits (266), Expect = 3e-25
Identities = 51/92 (55%), Positives = 76/92 (82%), Gaps = 2/92 (2%)
Frame = +3
Query: 417 FSSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRA 596
+++ +FVSRLS+YT E+SLR LFSPFG I EARLI+D+ T+RPKGFGF+ +++E +A +A
Sbjct: 5 YTAQLFVSRLSAYTTEQSLRQLFSPFGQITEARLIKDQQTQRPKGFGFITFKSENDAQKA 64
Query: 597 VQAMNYKIINGRLIFVEIAKDI--PESNKETS 686
++A+N KI++ RLIFVE AK++ P SN +++
Sbjct: 65 LKALNGKIVDSRLIFVEAAKEVEAPTSNMKSN 96
>OAP03426.1 hypothetical protein AXX17_AT3G39880 [Arabidopsis thaliana]
Length = 102
Score = 107 bits (266), Expect = 4e-25
Identities = 50/83 (60%), Positives = 70/83 (84%)
Frame = +3
Query: 420 SSAIFVSRLSSYTNEESLRHLFSPFGIIKEARLIRDKITRRPKGFGFVEYQNEAEANRAV 599
S+ +FVSRLS+YT ++SLR LFSPFG IKEARLIRD T+RPKGFGF+ + +E +A +A+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKAL 65
Query: 600 QAMNYKIINGRLIFVEIAKDIPE 668
++++ KI++GRLIFVE+AK+ E
Sbjct: 66 KSLDGKIVDGRLIFVEVAKNAEE 88