BLASTX nr result
ID: Alisma22_contig00000048
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Alisma22_contig00000048
(1682 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009780849.1 PREDICTED: chloroplast stem-loop binding protein ... 636 0.0
XP_018437951.1 PREDICTED: LOW QUALITY PROTEIN: chloroplast stem-... 632 0.0
XP_012088856.1 PREDICTED: chloroplast stem-loop binding protein ... 632 0.0
XP_009619213.1 PREDICTED: chloroplast stem-loop binding protein ... 630 0.0
XP_009148185.1 PREDICTED: chloroplast stem-loop binding protein ... 630 0.0
XP_013586906.1 PREDICTED: chloroplast stem-loop binding protein ... 629 0.0
XP_011092178.1 PREDICTED: chloroplast stem-loop binding protein ... 629 0.0
XP_006417582.1 hypothetical protein EUTSA_v10007937mg [Eutrema s... 629 0.0
XP_013641013.1 PREDICTED: chloroplast stem-loop binding protein ... 629 0.0
KFK43232.1 hypothetical protein AALP_AA1G097200 [Arabis alpina] 628 0.0
BAJ33886.1 unnamed protein product [Eutrema halophilum] 628 0.0
XP_019234782.1 PREDICTED: chloroplast stem-loop binding protein ... 628 0.0
XP_010475766.1 PREDICTED: chloroplast stem-loop binding protein ... 628 0.0
XP_011023817.1 PREDICTED: chloroplast stem-loop binding protein ... 627 0.0
JAU90666.1 Chloroplast stem-loop binding protein of 41 kDa b, ch... 627 0.0
JAU44200.1 Chloroplast stem-loop binding protein of 41 kDa b, ch... 627 0.0
XP_009412145.1 PREDICTED: chloroplast stem-loop binding protein ... 627 0.0
NP_172405.1 chloroplast RNA binding protein [Arabidopsis thalian... 626 0.0
ABK96584.1 unknown [Populus trichocarpa x Populus deltoides] 626 0.0
XP_010458216.1 PREDICTED: chloroplast stem-loop binding protein ... 626 0.0
>XP_009780849.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Nicotiana sylvestris] XP_016455933.1
PREDICTED: chloroplast stem-loop binding protein of 41
kDa b, chloroplastic-like [Nicotiana tabacum]
Length = 378
Score = 636 bits (1641), Expect = 0.0
Identities = 315/387 (81%), Positives = 340/387 (87%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA +VA++ + PS + DFNGA+L S+Q K++ CQ K +L +TAS
Sbjct: 1 MASLVAVQHKQPSFAVL--------PSSHSDFNGAKLISSLQFKRKPCQP-KGALHVTAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
AKKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGESDQD+ADFSSK+LH
Sbjct: 52 SAKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR DF+FVKSS+SAEGFDVVYDINGREAVEVEPILDALP LEQYIYCSSAGVYLK+D
Sbjct: 112 LKGDRMDFDFVKSSLSAEGFDVVYDINGREAVEVEPILDALPNLEQYIYCSSAGVYLKTD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
LPH E DAVDPKSRHKGKLETESLLES+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 YLPHFEADAVDPKSRHKGKLETESLLESRDVNWTSVRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIPIP SG QITQLGHVKDLATAFIQVL N KASKQVFNISG KYVTFDGLAKACAKA
Sbjct: 232 GRPIPIPNSGLQITQLGHVKDLATAFIQVLGNEKASKQVFNISGEKYVTFDGLAKACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKAVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVLN 1378
DFGRGT+RK ADF+TDD+IL K LVLN
Sbjct: 352 DFGRGTYRKEADFSTDDLILGKSLVLN 378
>XP_018437951.1 PREDICTED: LOW QUALITY PROTEIN: chloroplast stem-loop binding protein
of 41 kDa b, chloroplastic [Raphanus sativus]
Length = 378
Score = 632 bits (1630), Expect = 0.0
Identities = 313/386 (81%), Positives = 342/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L+ VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMMQQSQPSLSLL--------TSSLSDFNGAKLNLQVQYKRKV-QQPKGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
ILPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 ILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGWTPEFDLV+GL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWTPEFDLVDGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>XP_012088856.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Jatropha curcas] KDP23362.1 hypothetical
protein JCGZ_23195 [Jatropha curcas]
Length = 380
Score = 632 bits (1630), Expect = 0.0
Identities = 310/356 (87%), Positives = 330/356 (92%)
Frame = +2
Query: 308 DFNGARLSFSVQNKKRTCQTRKASLEITASGAKKILIMGGTRFIGIFLSRLLVKEGHQVT 487
DFNG RL +Q K++ QT K +L++TAS +K ILIMGGTRFIG+FLSRLLVKEGHQVT
Sbjct: 24 DFNGTRLHSQIQCKRKVWQT-KGALQVTASTSKNILIMGGTRFIGVFLSRLLVKEGHQVT 82
Query: 488 LFTRGKAPIAQQLPGESDQDFADFSSKILHLKGDRQDFEFVKSSVSAEGFDVVYDINGRE 667
LFTRGKAPI QQLPGESDQ++ADFSSKILHLKGDR+DFEFVKSS+SA+GFDVVYDINGRE
Sbjct: 83 LFTRGKAPITQQLPGESDQEYADFSSKILHLKGDRKDFEFVKSSLSAKGFDVVYDINGRE 142
Query: 668 AVEVEPILDALPKLEQYIYCSSAGVYLKSDILPHAEVDAVDPKSRHKGKLETESLLESKG 847
AVEVEPILDALPKLEQ+IYCSSAGVYLKSD+LPHAE DAVDPKSRHKGKLETESLLESKG
Sbjct: 143 AVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLESKG 202
Query: 848 VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGKQITQLGHVKDLATAFIQVL 1027
VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP SG QITQLGHVKDLA AFIQVL
Sbjct: 203 VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGVQITQLGHVKDLAKAFIQVL 262
Query: 1028 DNPKASKQVFNISGSKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 1207
N KASKQVFNISG KYVTFDGLA+ACAKA GFPEPE+VHYNPKEFDFGKKKAFPFRDQH
Sbjct: 263 GNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQH 322
Query: 1208 FFASIDKATQVLGWTPEFDLVEGLADSYNLDFGRGTFRKAADFTTDDMILSKKLVL 1375
FFASI+KA VLGW PEFDLVEGLADSYNLDFGRGTFRK ADF+TDD+IL K LVL
Sbjct: 323 FFASIEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDLILGKSLVL 378
>XP_009619213.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Nicotiana tomentosiformis] XP_016458846.1
PREDICTED: chloroplast stem-loop binding protein of 41
kDa b, chloroplastic [Nicotiana tabacum] XP_018631489.1
PREDICTED: chloroplast stem-loop binding protein of 41
kDa b, chloroplastic [Nicotiana tomentosiformis]
Length = 374
Score = 630 bits (1626), Expect = 0.0
Identities = 312/382 (81%), Positives = 336/382 (87%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA +VA++ + PS + DFNGA+L S+Q K++ CQ K +L +TAS
Sbjct: 1 MASLVAVQHKQPSFAVL--------PSSHSDFNGAKLISSLQFKRKPCQP-KGALHVTAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
AKKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGESDQD+ADFSSK+LH
Sbjct: 52 SAKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR DF+FVKSS+SAEGFDVVYDINGREAVEVEPILDALP LEQYIYCSSAGVYLK+D
Sbjct: 112 LKGDRMDFDFVKSSLSAEGFDVVYDINGREAVEVEPILDALPNLEQYIYCSSAGVYLKTD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
LPH E DAVDPKSRHKGKLETESLLES+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 YLPHFEADAVDPKSRHKGKLETESLLESRDVNWTSVRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIPIP SG QITQLGHVKDLATAFIQVL N KASKQVFNISG KYVTFDGLAKACAKA
Sbjct: 232 GRPIPIPNSGLQITQLGHVKDLATAFIQVLGNEKASKQVFNISGEKYVTFDGLAKACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKAVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSK 1363
DFGRGTFRK ADF+TDD+IL K
Sbjct: 352 DFGRGTFRKEADFSTDDLILGK 373
>XP_009148185.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Brassica rapa] XP_013641012.1 PREDICTED:
chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic isoform X1 [Brassica napus] CDX93509.1
BnaA06g05390D [Brassica napus]
Length = 378
Score = 630 bits (1624), Expect = 0.0
Identities = 312/386 (80%), Positives = 340/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMMQQSQPSLSLL--------TSSVSDFNGAKLHLQVQYKRKV-QQPKGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
+LPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 VLPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>XP_013586906.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Brassica oleracea var. oleracea]
XP_013711566.1 PREDICTED: chloroplast stem-loop binding
protein of 41 kDa b, chloroplastic-like [Brassica napus]
CDX94984.1 BnaC05g06870D [Brassica napus]
Length = 378
Score = 629 bits (1623), Expect = 0.0
Identities = 312/386 (80%), Positives = 340/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMLQQSQPSLSLL--------TSSLSDFNGAKLHSQVQYKRKV-QQPKGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
+LPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 VLPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>XP_011092178.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Sesamum indicum]
Length = 381
Score = 629 bits (1623), Expect = 0.0
Identities = 314/386 (81%), Positives = 338/386 (87%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA MV + + PS+ DFNGARL+ SVQ K++ Q K +L +TAS
Sbjct: 1 MASMVVVHHKQPSST------SILLSSSLSDFNGARLTASVQYKRKLWQP-KGALRVTAS 53
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES+ DFADFSSKILH
Sbjct: 54 STKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFADFSSKILH 113
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+DFEFVKSS++AEGFDVVYDINGREAVEVEPIL+ALP LEQYIYCSSAGVYLKSD
Sbjct: 114 LKGDRKDFEFVKSSLAAEGFDVVYDINGREAVEVEPILEALPNLEQYIYCSSAGVYLKSD 173
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
PH E+DAVDPKSRHKGKLETESLL+S+GVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 174 YPPHFEIDAVDPKSRHKGKLETESLLQSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 233
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIPIP SG Q+TQLGHVKDLATAFI+VL N KAS++VFNISG KYVTFDGLAKACAKA
Sbjct: 234 GRPIPIPNSGMQVTQLGHVKDLATAFIKVLGNEKASREVFNISGEKYVTFDGLAKACAKA 293
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
AGFPEPEIVHYNPKEFDFGKKK FPFRDQHFFAS++KA VLGW PEFDLVEGLADSYNL
Sbjct: 294 AGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNL 353
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADF+TDD+IL K LVL
Sbjct: 354 DFGRGTFRKEADFSTDDIILGKSLVL 379
>XP_006417582.1 hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
ESQ35935.1 hypothetical protein EUTSA_v10007937mg
[Eutrema salsugineum]
Length = 379
Score = 629 bits (1622), Expect = 0.0
Identities = 311/386 (80%), Positives = 340/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMLQQSQPSFSLL--------TSSLSDFNGAKLHLQVQYKRKVYQP-KGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
ILPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 ILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>XP_013641013.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic isoform X2 [Brassica napus]
Length = 378
Score = 629 bits (1621), Expect = 0.0
Identities = 311/386 (80%), Positives = 340/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMMQQSQPSLSLL--------TSSVSDFNGAKLHLQVQYKRKV-QQPKGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
+LPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 VLPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLV+GL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVDGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>KFK43232.1 hypothetical protein AALP_AA1G097200 [Arabis alpina]
Length = 379
Score = 628 bits (1620), Expect = 0.0
Identities = 311/386 (80%), Positives = 339/386 (87%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMLQQSQPSFSLL--------TSSLSDFNGAKLHLQVQYKRKVYQP-KGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
ILPH EVDAVDPKSRHKGKLETES LESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 ILPHCEVDAVDPKSRHKGKLETESFLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNI+G KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFVTVLGNEKASREIFNIAGEKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>BAJ33886.1 unnamed protein product [Eutrema halophilum]
Length = 379
Score = 628 bits (1620), Expect = 0.0
Identities = 305/356 (85%), Positives = 330/356 (92%)
Frame = +2
Query: 308 DFNGARLSFSVQNKKRTCQTRKASLEITASGAKKILIMGGTRFIGIFLSRLLVKEGHQVT 487
DFNGA+L VQ K++ Q K +L ++AS KKILIMGGTRFIG+FLSRLLVKEGHQVT
Sbjct: 23 DFNGAKLHLQVQYKRKVYQP-KGALYVSASSEKKILIMGGTRFIGVFLSRLLVKEGHQVT 81
Query: 488 LFTRGKAPIAQQLPGESDQDFADFSSKILHLKGDRQDFEFVKSSVSAEGFDVVYDINGRE 667
LFTRGK+PIA+QLPGESDQDFADFSSKILHLKGDR+D++FVKSS+SAEGFDVVYDINGRE
Sbjct: 82 LFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGRE 141
Query: 668 AVEVEPILDALPKLEQYIYCSSAGVYLKSDILPHAEVDAVDPKSRHKGKLETESLLESKG 847
A EVEPI+DALPKLEQYIYCSSAGVYLKSDILPH EVDAVDPKSRHKGKLETESLL+SKG
Sbjct: 142 AEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKG 201
Query: 848 VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGKQITQLGHVKDLATAFIQVL 1027
VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P SG QI+QLGHVKDLATAF+ VL
Sbjct: 202 VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVL 261
Query: 1028 DNPKASKQVFNISGSKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 1207
N KAS+++FNISG KY+TFDGLA+ACAKA GFPEPEIVHYNPKEFDFGKKKAFPFRDQH
Sbjct: 262 GNEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 321
Query: 1208 FFASIDKATQVLGWTPEFDLVEGLADSYNLDFGRGTFRKAADFTTDDMILSKKLVL 1375
FFAS++KA VLGW PEFDLVEGL DSYNLDFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 322 FFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVL 377
>XP_019234782.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Nicotiana attenuata] OIT26506.1
chloroplast stem-loop binding protein of 41 kda b,
chloroplastic [Nicotiana attenuata]
Length = 374
Score = 628 bits (1619), Expect = 0.0
Identities = 310/382 (81%), Positives = 336/382 (87%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA +VA++ + PS + DFNGA+L S+Q K++ CQ K +L +TAS
Sbjct: 1 MASLVAVQHKQPSFAVL--------PSSHSDFNGAKLISSLQFKRKPCQP-KGALHVTAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
AKKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGESDQD+ADFSSK+LH
Sbjct: 52 SAKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR DF+FVK+S+SAEGFDVVYDINGREAVEVEPILDALP LEQYIYCSSAGVYLK+D
Sbjct: 112 LKGDRMDFDFVKTSLSAEGFDVVYDINGREAVEVEPILDALPNLEQYIYCSSAGVYLKTD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
LPH E DAVDPKSRHKGKLETESLLES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 YLPHFEADAVDPKSRHKGKLETESLLESRGVNWTSVRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIPIP SG QITQLGHVKDLATAFI+VL N KASKQVFNISG KYVTFDGLAKACAKA
Sbjct: 232 GRPIPIPNSGLQITQLGHVKDLATAFIKVLGNEKASKQVFNISGEKYVTFDGLAKACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEF LVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKAVLGWKPEFGLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSK 1363
DFGRGTFRK ADF+TDD+IL K
Sbjct: 352 DFGRGTFRKEADFSTDDLILGK 373
>XP_010475766.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Camelina sativa]
Length = 379
Score = 628 bits (1619), Expect = 0.0
Identities = 310/386 (80%), Positives = 340/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA++ VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMLQQHQPSFSLL--------TSSLSDFNGAKIHLQVQYKRKVHQP-KGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
ILPH E DAVDPKSRHKGKLETESLL++KGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 ILPHCEEDAVDPKSRHKGKLETESLLQTKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KASK++FNISG KYVTFDGLAKACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASKEIFNISGDKYVTFDGLAKACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA +VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKRVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>XP_011023817.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Populus euphratica]
Length = 380
Score = 627 bits (1618), Expect = 0.0
Identities = 308/356 (86%), Positives = 330/356 (92%)
Frame = +2
Query: 308 DFNGARLSFSVQNKKRTCQTRKASLEITASGAKKILIMGGTRFIGIFLSRLLVKEGHQVT 487
DFNG RL VQ K+R QT K +L+++AS +K ILIMGGTRFIG+FLSRLLVKEGHQVT
Sbjct: 24 DFNGTRLHSQVQCKRRVWQT-KGALQVSASSSKNILIMGGTRFIGVFLSRLLVKEGHQVT 82
Query: 488 LFTRGKAPIAQQLPGESDQDFADFSSKILHLKGDRQDFEFVKSSVSAEGFDVVYDINGRE 667
LFTRGKAPI QQLPGESDQD+ADFSSKILHLKGDR+DFEFVK+S++A+GFDVVYDINGRE
Sbjct: 83 LFTRGKAPITQQLPGESDQDYADFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGRE 142
Query: 668 AVEVEPILDALPKLEQYIYCSSAGVYLKSDILPHAEVDAVDPKSRHKGKLETESLLESKG 847
AVEVEPILDALPKLEQ+IYCSSAGVYLKSD+LPH+E DAVDPKSRHKGKLETESLLES+G
Sbjct: 143 AVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRG 202
Query: 848 VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGKQITQLGHVKDLATAFIQVL 1027
VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP SG Q+TQLGHVKDLA AFIQVL
Sbjct: 203 VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVL 262
Query: 1028 DNPKASKQVFNISGSKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 1207
N KAS+QVFNISG KYVTFDGLAKACAKAAGFPEPEIVHYNPK+FDFGKKKAFPFRDQH
Sbjct: 263 GNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQH 322
Query: 1208 FFASIDKATQVLGWTPEFDLVEGLADSYNLDFGRGTFRKAADFTTDDMILSKKLVL 1375
FFASIDKA VLGW PEFDLVEGLADSYNLDFGRGT+RK ADF TDD+IL K LVL
Sbjct: 323 FFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLILGKSLVL 378
>JAU90666.1 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
[Noccaea caerulescens]
Length = 379
Score = 627 bits (1616), Expect = 0.0
Identities = 310/386 (80%), Positives = 340/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMLQQSQPSFSLLASSLS--------DFNGAKLHSQVQYKRKVKQP-KGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIG+FLSRLL+KEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGVFLSRLLLKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
ILPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 ILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGDKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLV+GL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVDGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>JAU44200.1 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
[Noccaea caerulescens]
Length = 379
Score = 627 bits (1616), Expect = 0.0
Identities = 310/386 (80%), Positives = 340/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMLQQSQPSFSLL--------TSSLSDFNGAKLHSQVQYKRKV-QQPKGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIG+FLSRLL+KEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGVFLSRLLLKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
ILPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 ILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGDKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLV+GL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVDGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>XP_009412145.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 385
Score = 627 bits (1616), Expect = 0.0
Identities = 310/386 (80%), Positives = 341/386 (88%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA++VA++ R S + +F+GA LS S+Q ++RT Q K +L++TAS
Sbjct: 1 MARLVAMQPRQASPWASSSSPLLPSSLS--EFSGAALSISLQKRRRTWQP-KGALQVTAS 57
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
GAKKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQD+ DF SKILH
Sbjct: 58 GAKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYEDFKSKILH 117
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+DFEFVK+S++A+GFDV+YDINGREAVEVEPILDALPKLEQ+IYCSSAGVYLKSD
Sbjct: 118 LKGDRKDFEFVKTSLAAKGFDVIYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSD 177
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
+LPH E DAVDPKSRHKGKLETESLL+S+GVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 178 LLPHFETDAVDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 237
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QITQLGHVKDLA AF+ VL N KASKQV+NISGSKYVTFDGLA+ACAK
Sbjct: 238 GRPIPVPNSGVQITQLGHVKDLARAFVMVLGNSKASKQVYNISGSKYVTFDGLARACAKG 297
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASI+KA + LGW PEF LVEGLADSYNL
Sbjct: 298 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIEKAQRELGWAPEFGLVEGLADSYNL 357
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMIL K LVL
Sbjct: 358 DFGRGTFRKPADFTTDDMILGKSLVL 383
>NP_172405.1 chloroplast RNA binding protein [Arabidopsis thaliana] Q9SA52.1
RecName: Full=Chloroplast stem-loop binding protein of 41
kDa b, chloroplastic; Short=CSP41-b; AltName:
Full=Heteroglycan-interacting protein 1.3; AltName:
Full=Protein CHLOROPLAST RNA BINDING; AltName:
Full=Protein Gb5f; Flags: Precursor AAG40395.1 At1g09340
[Arabidopsis thaliana] AAL16114.1 At1g09340/T31J12_6
[Arabidopsis thaliana] AAD18098.1 Identical to gb|Y10557
g5bf gene from Arabidopsis thaliana. ESTs gb|R30578,
gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767
come from this gene [Arabidopsis thaliana] AAK59555.1
putative RNA-binding protein [Arabidopsis thaliana]
AAL47493.1 putative RNA-binding protein [Arabidopsis
thaliana] AEE28431.1 chloroplast RNA binding protein
[Arabidopsis thaliana] OAP13774.1 HIP1.3 [Arabidopsis
thaliana]
Length = 378
Score = 626 bits (1615), Expect = 0.0
Identities = 310/386 (80%), Positives = 339/386 (87%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K +L ++AS
Sbjct: 1 MAKMMMLQQHQPSFSLL--------TSSLSDFNGAKLHLQVQYKRKVHQP-KGALYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
ILPH E DAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 ILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLAKACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377
>ABK96584.1 unknown [Populus trichocarpa x Populus deltoides]
Length = 380
Score = 626 bits (1615), Expect = 0.0
Identities = 307/356 (86%), Positives = 330/356 (92%)
Frame = +2
Query: 308 DFNGARLSFSVQNKKRTCQTRKASLEITASGAKKILIMGGTRFIGIFLSRLLVKEGHQVT 487
DFNG RL VQ K+R QT K +L+++AS +K ILIMGGTRFIG+FLSRLLVKEGHQVT
Sbjct: 24 DFNGTRLHSQVQCKRRVWQT-KGALQVSASSSKNILIMGGTRFIGVFLSRLLVKEGHQVT 82
Query: 488 LFTRGKAPIAQQLPGESDQDFADFSSKILHLKGDRQDFEFVKSSVSAEGFDVVYDINGRE 667
LFTRGKAPI QQLPGESDQD++DFSSKILHLKGDR+DFEFVK+S++A+GFDVVYDINGRE
Sbjct: 83 LFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGRE 142
Query: 668 AVEVEPILDALPKLEQYIYCSSAGVYLKSDILPHAEVDAVDPKSRHKGKLETESLLESKG 847
AVEVEPILDALPKLEQ+IYCSSAGVYLKSD+LPH+E DAVDPKSRHKGKLETESLLES+G
Sbjct: 143 AVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRG 202
Query: 848 VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGKQITQLGHVKDLATAFIQVL 1027
VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP SG Q+TQLGHVKDLA AFIQVL
Sbjct: 203 VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVL 262
Query: 1028 DNPKASKQVFNISGSKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 1207
N KAS+QVFNISG KYVTFDGLAKACAKAAGFPEPEIVHYNPK+FDFGKKKAFPFRDQH
Sbjct: 263 GNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQH 322
Query: 1208 FFASIDKATQVLGWTPEFDLVEGLADSYNLDFGRGTFRKAADFTTDDMILSKKLVL 1375
FFASIDKA VLGW PEFDLVEGLADSYNLDFGRGT+RK ADF TDD+IL K LVL
Sbjct: 323 FFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLILGKSLVL 378
>XP_010458216.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
chloroplastic [Camelina sativa]
Length = 379
Score = 626 bits (1614), Expect = 0.0
Identities = 309/386 (80%), Positives = 339/386 (87%)
Frame = +2
Query: 218 MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
MA+M+ ++ PS + DFNGA+L VQ K++ Q K L ++AS
Sbjct: 1 MAKMMMLQQHQPSFSLL--------TSSLSDFNGAKLHLQVQYKRKVHQP-KGGLYVSAS 51
Query: 398 GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
KKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52 SEKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111
Query: 578 LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD
Sbjct: 112 LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSD 171
Query: 758 ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
ILPH E DAVDPKSRHKGKLETESLL++KGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172 ILPHCEEDAVDPKSRHKGKLETESLLQTKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231
Query: 938 GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232 GRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGDKYVTFDGLARACAKA 291
Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA +VLGW PEFDLVEGL DSYNL
Sbjct: 292 GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKRVLGWKPEFDLVEGLTDSYNL 351
Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352 DFGRGTFRKEADFTTDDMILSKKLVL 377