BLASTX nr result

ID: Alisma22_contig00000048 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Alisma22_contig00000048
         (1682 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_009780849.1 PREDICTED: chloroplast stem-loop binding protein ...   636   0.0  
XP_018437951.1 PREDICTED: LOW QUALITY PROTEIN: chloroplast stem-...   632   0.0  
XP_012088856.1 PREDICTED: chloroplast stem-loop binding protein ...   632   0.0  
XP_009619213.1 PREDICTED: chloroplast stem-loop binding protein ...   630   0.0  
XP_009148185.1 PREDICTED: chloroplast stem-loop binding protein ...   630   0.0  
XP_013586906.1 PREDICTED: chloroplast stem-loop binding protein ...   629   0.0  
XP_011092178.1 PREDICTED: chloroplast stem-loop binding protein ...   629   0.0  
XP_006417582.1 hypothetical protein EUTSA_v10007937mg [Eutrema s...   629   0.0  
XP_013641013.1 PREDICTED: chloroplast stem-loop binding protein ...   629   0.0  
KFK43232.1 hypothetical protein AALP_AA1G097200 [Arabis alpina]       628   0.0  
BAJ33886.1 unnamed protein product [Eutrema halophilum]               628   0.0  
XP_019234782.1 PREDICTED: chloroplast stem-loop binding protein ...   628   0.0  
XP_010475766.1 PREDICTED: chloroplast stem-loop binding protein ...   628   0.0  
XP_011023817.1 PREDICTED: chloroplast stem-loop binding protein ...   627   0.0  
JAU90666.1 Chloroplast stem-loop binding protein of 41 kDa b, ch...   627   0.0  
JAU44200.1 Chloroplast stem-loop binding protein of 41 kDa b, ch...   627   0.0  
XP_009412145.1 PREDICTED: chloroplast stem-loop binding protein ...   627   0.0  
NP_172405.1 chloroplast RNA binding protein [Arabidopsis thalian...   626   0.0  
ABK96584.1 unknown [Populus trichocarpa x Populus deltoides]          626   0.0  
XP_010458216.1 PREDICTED: chloroplast stem-loop binding protein ...   626   0.0  

>XP_009780849.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Nicotiana sylvestris] XP_016455933.1
            PREDICTED: chloroplast stem-loop binding protein of 41
            kDa b, chloroplastic-like [Nicotiana tabacum]
          Length = 378

 Score =  636 bits (1641), Expect = 0.0
 Identities = 315/387 (81%), Positives = 340/387 (87%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA +VA++ + PS  +              DFNGA+L  S+Q K++ CQ  K +L +TAS
Sbjct: 1    MASLVAVQHKQPSFAVL--------PSSHSDFNGAKLISSLQFKRKPCQP-KGALHVTAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
             AKKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGESDQD+ADFSSK+LH
Sbjct: 52   SAKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR DF+FVKSS+SAEGFDVVYDINGREAVEVEPILDALP LEQYIYCSSAGVYLK+D
Sbjct: 112  LKGDRMDFDFVKSSLSAEGFDVVYDINGREAVEVEPILDALPNLEQYIYCSSAGVYLKTD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
             LPH E DAVDPKSRHKGKLETESLLES+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  YLPHFEADAVDPKSRHKGKLETESLLESRDVNWTSVRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIPIP SG QITQLGHVKDLATAFIQVL N KASKQVFNISG KYVTFDGLAKACAKA
Sbjct: 232  GRPIPIPNSGLQITQLGHVKDLATAFIQVLGNEKASKQVFNISGEKYVTFDGLAKACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKAVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVLN 1378
            DFGRGT+RK ADF+TDD+IL K LVLN
Sbjct: 352  DFGRGTYRKEADFSTDDLILGKSLVLN 378


>XP_018437951.1 PREDICTED: LOW QUALITY PROTEIN: chloroplast stem-loop binding protein
            of 41 kDa b, chloroplastic [Raphanus sativus]
          Length = 378

 Score =  632 bits (1630), Expect = 0.0
 Identities = 313/386 (81%), Positives = 342/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L+  VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMMQQSQPSLSLL--------TSSLSDFNGAKLNLQVQYKRKV-QQPKGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            ILPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  ILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGWTPEFDLV+GL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWTPEFDLVDGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>XP_012088856.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Jatropha curcas] KDP23362.1 hypothetical
            protein JCGZ_23195 [Jatropha curcas]
          Length = 380

 Score =  632 bits (1630), Expect = 0.0
 Identities = 310/356 (87%), Positives = 330/356 (92%)
 Frame = +2

Query: 308  DFNGARLSFSVQNKKRTCQTRKASLEITASGAKKILIMGGTRFIGIFLSRLLVKEGHQVT 487
            DFNG RL   +Q K++  QT K +L++TAS +K ILIMGGTRFIG+FLSRLLVKEGHQVT
Sbjct: 24   DFNGTRLHSQIQCKRKVWQT-KGALQVTASTSKNILIMGGTRFIGVFLSRLLVKEGHQVT 82

Query: 488  LFTRGKAPIAQQLPGESDQDFADFSSKILHLKGDRQDFEFVKSSVSAEGFDVVYDINGRE 667
            LFTRGKAPI QQLPGESDQ++ADFSSKILHLKGDR+DFEFVKSS+SA+GFDVVYDINGRE
Sbjct: 83   LFTRGKAPITQQLPGESDQEYADFSSKILHLKGDRKDFEFVKSSLSAKGFDVVYDINGRE 142

Query: 668  AVEVEPILDALPKLEQYIYCSSAGVYLKSDILPHAEVDAVDPKSRHKGKLETESLLESKG 847
            AVEVEPILDALPKLEQ+IYCSSAGVYLKSD+LPHAE DAVDPKSRHKGKLETESLLESKG
Sbjct: 143  AVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHAETDAVDPKSRHKGKLETESLLESKG 202

Query: 848  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGKQITQLGHVKDLATAFIQVL 1027
            VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP SG QITQLGHVKDLA AFIQVL
Sbjct: 203  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGVQITQLGHVKDLAKAFIQVL 262

Query: 1028 DNPKASKQVFNISGSKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 1207
             N KASKQVFNISG KYVTFDGLA+ACAKA GFPEPE+VHYNPKEFDFGKKKAFPFRDQH
Sbjct: 263  GNEKASKQVFNISGEKYVTFDGLARACAKAGGFPEPELVHYNPKEFDFGKKKAFPFRDQH 322

Query: 1208 FFASIDKATQVLGWTPEFDLVEGLADSYNLDFGRGTFRKAADFTTDDMILSKKLVL 1375
            FFASI+KA  VLGW PEFDLVEGLADSYNLDFGRGTFRK ADF+TDD+IL K LVL
Sbjct: 323  FFASIEKAKHVLGWKPEFDLVEGLADSYNLDFGRGTFRKEADFSTDDLILGKSLVL 378


>XP_009619213.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Nicotiana tomentosiformis] XP_016458846.1
            PREDICTED: chloroplast stem-loop binding protein of 41
            kDa b, chloroplastic [Nicotiana tabacum] XP_018631489.1
            PREDICTED: chloroplast stem-loop binding protein of 41
            kDa b, chloroplastic [Nicotiana tomentosiformis]
          Length = 374

 Score =  630 bits (1626), Expect = 0.0
 Identities = 312/382 (81%), Positives = 336/382 (87%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA +VA++ + PS  +              DFNGA+L  S+Q K++ CQ  K +L +TAS
Sbjct: 1    MASLVAVQHKQPSFAVL--------PSSHSDFNGAKLISSLQFKRKPCQP-KGALHVTAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
             AKKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGESDQD+ADFSSK+LH
Sbjct: 52   SAKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR DF+FVKSS+SAEGFDVVYDINGREAVEVEPILDALP LEQYIYCSSAGVYLK+D
Sbjct: 112  LKGDRMDFDFVKSSLSAEGFDVVYDINGREAVEVEPILDALPNLEQYIYCSSAGVYLKTD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
             LPH E DAVDPKSRHKGKLETESLLES+ VNWTS+RPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  YLPHFEADAVDPKSRHKGKLETESLLESRDVNWTSVRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIPIP SG QITQLGHVKDLATAFIQVL N KASKQVFNISG KYVTFDGLAKACAKA
Sbjct: 232  GRPIPIPNSGLQITQLGHVKDLATAFIQVLGNEKASKQVFNISGEKYVTFDGLAKACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKAVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSK 1363
            DFGRGTFRK ADF+TDD+IL K
Sbjct: 352  DFGRGTFRKEADFSTDDLILGK 373


>XP_009148185.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Brassica rapa] XP_013641012.1 PREDICTED:
            chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic isoform X1 [Brassica napus] CDX93509.1
            BnaA06g05390D [Brassica napus]
          Length = 378

 Score =  630 bits (1624), Expect = 0.0
 Identities = 312/386 (80%), Positives = 340/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMMQQSQPSLSLL--------TSSVSDFNGAKLHLQVQYKRKV-QQPKGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            +LPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  VLPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>XP_013586906.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Brassica oleracea var. oleracea]
            XP_013711566.1 PREDICTED: chloroplast stem-loop binding
            protein of 41 kDa b, chloroplastic-like [Brassica napus]
            CDX94984.1 BnaC05g06870D [Brassica napus]
          Length = 378

 Score =  629 bits (1623), Expect = 0.0
 Identities = 312/386 (80%), Positives = 340/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMLQQSQPSLSLL--------TSSLSDFNGAKLHSQVQYKRKV-QQPKGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            +LPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  VLPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>XP_011092178.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Sesamum indicum]
          Length = 381

 Score =  629 bits (1623), Expect = 0.0
 Identities = 314/386 (81%), Positives = 338/386 (87%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA MV +  + PS+                DFNGARL+ SVQ K++  Q  K +L +TAS
Sbjct: 1    MASMVVVHHKQPSST------SILLSSSLSDFNGARLTASVQYKRKLWQP-KGALRVTAS 53

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGES+ DFADFSSKILH
Sbjct: 54   STKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESEADFADFSSKILH 113

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+DFEFVKSS++AEGFDVVYDINGREAVEVEPIL+ALP LEQYIYCSSAGVYLKSD
Sbjct: 114  LKGDRKDFEFVKSSLAAEGFDVVYDINGREAVEVEPILEALPNLEQYIYCSSAGVYLKSD 173

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
              PH E+DAVDPKSRHKGKLETESLL+S+GVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 174  YPPHFEIDAVDPKSRHKGKLETESLLQSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 233

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIPIP SG Q+TQLGHVKDLATAFI+VL N KAS++VFNISG KYVTFDGLAKACAKA
Sbjct: 234  GRPIPIPNSGMQVTQLGHVKDLATAFIKVLGNEKASREVFNISGEKYVTFDGLAKACAKA 293

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
            AGFPEPEIVHYNPKEFDFGKKK FPFRDQHFFAS++KA  VLGW PEFDLVEGLADSYNL
Sbjct: 294  AGFPEPEIVHYNPKEFDFGKKKPFPFRDQHFFASVEKAKSVLGWKPEFDLVEGLADSYNL 353

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADF+TDD+IL K LVL
Sbjct: 354  DFGRGTFRKEADFSTDDIILGKSLVL 379


>XP_006417582.1 hypothetical protein EUTSA_v10007937mg [Eutrema salsugineum]
            ESQ35935.1 hypothetical protein EUTSA_v10007937mg
            [Eutrema salsugineum]
          Length = 379

 Score =  629 bits (1622), Expect = 0.0
 Identities = 311/386 (80%), Positives = 340/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMLQQSQPSFSLL--------TSSLSDFNGAKLHLQVQYKRKVYQP-KGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            ILPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  ILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>XP_013641013.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic isoform X2 [Brassica napus]
          Length = 378

 Score =  629 bits (1621), Expect = 0.0
 Identities = 311/386 (80%), Positives = 340/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMMQQSQPSLSLL--------TSSVSDFNGAKLHLQVQYKRKV-QQPKGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            +LPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  VLPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGEKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLV+GL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVDGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>KFK43232.1 hypothetical protein AALP_AA1G097200 [Arabis alpina]
          Length = 379

 Score =  628 bits (1620), Expect = 0.0
 Identities = 311/386 (80%), Positives = 339/386 (87%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMLQQSQPSFSLL--------TSSLSDFNGAKLHLQVQYKRKVYQP-KGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            ILPH EVDAVDPKSRHKGKLETES LESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  ILPHCEVDAVDPKSRHKGKLETESFLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNI+G KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFVTVLGNEKASREIFNIAGEKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>BAJ33886.1 unnamed protein product [Eutrema halophilum]
          Length = 379

 Score =  628 bits (1620), Expect = 0.0
 Identities = 305/356 (85%), Positives = 330/356 (92%)
 Frame = +2

Query: 308  DFNGARLSFSVQNKKRTCQTRKASLEITASGAKKILIMGGTRFIGIFLSRLLVKEGHQVT 487
            DFNGA+L   VQ K++  Q  K +L ++AS  KKILIMGGTRFIG+FLSRLLVKEGHQVT
Sbjct: 23   DFNGAKLHLQVQYKRKVYQP-KGALYVSASSEKKILIMGGTRFIGVFLSRLLVKEGHQVT 81

Query: 488  LFTRGKAPIAQQLPGESDQDFADFSSKILHLKGDRQDFEFVKSSVSAEGFDVVYDINGRE 667
            LFTRGK+PIA+QLPGESDQDFADFSSKILHLKGDR+D++FVKSS+SAEGFDVVYDINGRE
Sbjct: 82   LFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGRE 141

Query: 668  AVEVEPILDALPKLEQYIYCSSAGVYLKSDILPHAEVDAVDPKSRHKGKLETESLLESKG 847
            A EVEPI+DALPKLEQYIYCSSAGVYLKSDILPH EVDAVDPKSRHKGKLETESLL+SKG
Sbjct: 142  AEEVEPIIDALPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKG 201

Query: 848  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGKQITQLGHVKDLATAFIQVL 1027
            VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIP+P SG QI+QLGHVKDLATAF+ VL
Sbjct: 202  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVL 261

Query: 1028 DNPKASKQVFNISGSKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 1207
             N KAS+++FNISG KY+TFDGLA+ACAKA GFPEPEIVHYNPKEFDFGKKKAFPFRDQH
Sbjct: 262  GNEKASREIFNISGEKYITFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 321

Query: 1208 FFASIDKATQVLGWTPEFDLVEGLADSYNLDFGRGTFRKAADFTTDDMILSKKLVL 1375
            FFAS++KA  VLGW PEFDLVEGL DSYNLDFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 322  FFASVEKAKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVL 377


>XP_019234782.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Nicotiana attenuata] OIT26506.1
            chloroplast stem-loop binding protein of 41 kda b,
            chloroplastic [Nicotiana attenuata]
          Length = 374

 Score =  628 bits (1619), Expect = 0.0
 Identities = 310/382 (81%), Positives = 336/382 (87%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA +VA++ + PS  +              DFNGA+L  S+Q K++ CQ  K +L +TAS
Sbjct: 1    MASLVAVQHKQPSFAVL--------PSSHSDFNGAKLISSLQFKRKPCQP-KGALHVTAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
             AKKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI+QQLPGESDQD+ADFSSK+LH
Sbjct: 52   SAKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPISQQLPGESDQDYADFSSKLLH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR DF+FVK+S+SAEGFDVVYDINGREAVEVEPILDALP LEQYIYCSSAGVYLK+D
Sbjct: 112  LKGDRMDFDFVKTSLSAEGFDVVYDINGREAVEVEPILDALPNLEQYIYCSSAGVYLKTD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
             LPH E DAVDPKSRHKGKLETESLLES+GVNWTS+RPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  YLPHFEADAVDPKSRHKGKLETESLLESRGVNWTSVRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIPIP SG QITQLGHVKDLATAFI+VL N KASKQVFNISG KYVTFDGLAKACAKA
Sbjct: 232  GRPIPIPNSGLQITQLGHVKDLATAFIKVLGNEKASKQVFNISGEKYVTFDGLAKACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEF LVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKAVLGWKPEFGLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSK 1363
            DFGRGTFRK ADF+TDD+IL K
Sbjct: 352  DFGRGTFRKEADFSTDDLILGK 373


>XP_010475766.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Camelina sativa]
          Length = 379

 Score =  628 bits (1619), Expect = 0.0
 Identities = 310/386 (80%), Positives = 340/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA++   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMLQQHQPSFSLL--------TSSLSDFNGAKIHLQVQYKRKVHQP-KGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            ILPH E DAVDPKSRHKGKLETESLL++KGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  ILPHCEEDAVDPKSRHKGKLETESLLQTKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KASK++FNISG KYVTFDGLAKACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASKEIFNISGDKYVTFDGLAKACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA +VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKRVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>XP_011023817.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Populus euphratica]
          Length = 380

 Score =  627 bits (1618), Expect = 0.0
 Identities = 308/356 (86%), Positives = 330/356 (92%)
 Frame = +2

Query: 308  DFNGARLSFSVQNKKRTCQTRKASLEITASGAKKILIMGGTRFIGIFLSRLLVKEGHQVT 487
            DFNG RL   VQ K+R  QT K +L+++AS +K ILIMGGTRFIG+FLSRLLVKEGHQVT
Sbjct: 24   DFNGTRLHSQVQCKRRVWQT-KGALQVSASSSKNILIMGGTRFIGVFLSRLLVKEGHQVT 82

Query: 488  LFTRGKAPIAQQLPGESDQDFADFSSKILHLKGDRQDFEFVKSSVSAEGFDVVYDINGRE 667
            LFTRGKAPI QQLPGESDQD+ADFSSKILHLKGDR+DFEFVK+S++A+GFDVVYDINGRE
Sbjct: 83   LFTRGKAPITQQLPGESDQDYADFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGRE 142

Query: 668  AVEVEPILDALPKLEQYIYCSSAGVYLKSDILPHAEVDAVDPKSRHKGKLETESLLESKG 847
            AVEVEPILDALPKLEQ+IYCSSAGVYLKSD+LPH+E DAVDPKSRHKGKLETESLLES+G
Sbjct: 143  AVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRG 202

Query: 848  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGKQITQLGHVKDLATAFIQVL 1027
            VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP SG Q+TQLGHVKDLA AFIQVL
Sbjct: 203  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVL 262

Query: 1028 DNPKASKQVFNISGSKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 1207
             N KAS+QVFNISG KYVTFDGLAKACAKAAGFPEPEIVHYNPK+FDFGKKKAFPFRDQH
Sbjct: 263  GNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQH 322

Query: 1208 FFASIDKATQVLGWTPEFDLVEGLADSYNLDFGRGTFRKAADFTTDDMILSKKLVL 1375
            FFASIDKA  VLGW PEFDLVEGLADSYNLDFGRGT+RK ADF TDD+IL K LVL
Sbjct: 323  FFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLILGKSLVL 378


>JAU90666.1 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
            [Noccaea caerulescens]
          Length = 379

 Score =  627 bits (1616), Expect = 0.0
 Identities = 310/386 (80%), Positives = 340/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMLQQSQPSFSLLASSLS--------DFNGAKLHSQVQYKRKVKQP-KGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIG+FLSRLL+KEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGVFLSRLLLKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            ILPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  ILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGDKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLV+GL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVDGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>JAU44200.1 Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
            [Noccaea caerulescens]
          Length = 379

 Score =  627 bits (1616), Expect = 0.0
 Identities = 310/386 (80%), Positives = 340/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMLQQSQPSFSLL--------TSSLSDFNGAKLHSQVQYKRKV-QQPKGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIG+FLSRLL+KEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGVFLSRLLLKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPILDALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            ILPH EVDAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  ILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASREIFNISGDKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLV+GL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVDGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>XP_009412145.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Musa acuminata subsp. malaccensis]
          Length = 385

 Score =  627 bits (1616), Expect = 0.0
 Identities = 310/386 (80%), Positives = 341/386 (88%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA++VA++ R  S   +             +F+GA LS S+Q ++RT Q  K +L++TAS
Sbjct: 1    MARLVAMQPRQASPWASSSSPLLPSSLS--EFSGAALSISLQKRRRTWQP-KGALQVTAS 57

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
            GAKKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGKAPI QQLPGESDQD+ DF SKILH
Sbjct: 58   GAKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDQDYEDFKSKILH 117

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+DFEFVK+S++A+GFDV+YDINGREAVEVEPILDALPKLEQ+IYCSSAGVYLKSD
Sbjct: 118  LKGDRKDFEFVKTSLAAKGFDVIYDINGREAVEVEPILDALPKLEQFIYCSSAGVYLKSD 177

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            +LPH E DAVDPKSRHKGKLETESLL+S+GVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 178  LLPHFETDAVDPKSRHKGKLETESLLDSRGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 237

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QITQLGHVKDLA AF+ VL N KASKQV+NISGSKYVTFDGLA+ACAK 
Sbjct: 238  GRPIPVPNSGVQITQLGHVKDLARAFVMVLGNSKASKQVYNISGSKYVTFDGLARACAKG 297

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
            AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASI+KA + LGW PEF LVEGLADSYNL
Sbjct: 298  AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIEKAQRELGWAPEFGLVEGLADSYNL 357

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMIL K LVL
Sbjct: 358  DFGRGTFRKPADFTTDDMILGKSLVL 383


>NP_172405.1 chloroplast RNA binding protein [Arabidopsis thaliana] Q9SA52.1
            RecName: Full=Chloroplast stem-loop binding protein of 41
            kDa b, chloroplastic; Short=CSP41-b; AltName:
            Full=Heteroglycan-interacting protein 1.3; AltName:
            Full=Protein CHLOROPLAST RNA BINDING; AltName:
            Full=Protein Gb5f; Flags: Precursor AAG40395.1 At1g09340
            [Arabidopsis thaliana] AAL16114.1 At1g09340/T31J12_6
            [Arabidopsis thaliana] AAD18098.1 Identical to gb|Y10557
            g5bf gene from Arabidopsis thaliana. ESTs gb|R30578,
            gb|R90475, gb|T22384, gb|T22425, gb|N64934 and gb|T46767
            come from this gene [Arabidopsis thaliana] AAK59555.1
            putative RNA-binding protein [Arabidopsis thaliana]
            AAL47493.1 putative RNA-binding protein [Arabidopsis
            thaliana] AEE28431.1 chloroplast RNA binding protein
            [Arabidopsis thaliana] OAP13774.1 HIP1.3 [Arabidopsis
            thaliana]
          Length = 378

 Score =  626 bits (1615), Expect = 0.0
 Identities = 310/386 (80%), Positives = 339/386 (87%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K +L ++AS
Sbjct: 1    MAKMMMLQQHQPSFSLL--------TSSLSDFNGAKLHLQVQYKRKVHQP-KGALYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIG+FLSR+LVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPIL+ALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            ILPH E DAVDPKSRHKGKLETESLL+SKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  ILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLAKACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGEKYVTFDGLAKACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA  VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


>ABK96584.1 unknown [Populus trichocarpa x Populus deltoides]
          Length = 380

 Score =  626 bits (1615), Expect = 0.0
 Identities = 307/356 (86%), Positives = 330/356 (92%)
 Frame = +2

Query: 308  DFNGARLSFSVQNKKRTCQTRKASLEITASGAKKILIMGGTRFIGIFLSRLLVKEGHQVT 487
            DFNG RL   VQ K+R  QT K +L+++AS +K ILIMGGTRFIG+FLSRLLVKEGHQVT
Sbjct: 24   DFNGTRLHSQVQCKRRVWQT-KGALQVSASSSKNILIMGGTRFIGVFLSRLLVKEGHQVT 82

Query: 488  LFTRGKAPIAQQLPGESDQDFADFSSKILHLKGDRQDFEFVKSSVSAEGFDVVYDINGRE 667
            LFTRGKAPI QQLPGESDQD++DFSSKILHLKGDR+DFEFVK+S++A+GFDVVYDINGRE
Sbjct: 83   LFTRGKAPITQQLPGESDQDYSDFSSKILHLKGDRKDFEFVKTSLAAKGFDVVYDINGRE 142

Query: 668  AVEVEPILDALPKLEQYIYCSSAGVYLKSDILPHAEVDAVDPKSRHKGKLETESLLESKG 847
            AVEVEPILDALPKLEQ+IYCSSAGVYLKSD+LPH+E DAVDPKSRHKGKLETESLLES+G
Sbjct: 143  AVEVEPILDALPKLEQFIYCSSAGVYLKSDLLPHSEKDAVDPKSRHKGKLETESLLESRG 202

Query: 848  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGKQITQLGHVKDLATAFIQVL 1027
            VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIP SG Q+TQLGHVKDLA AFIQVL
Sbjct: 203  VNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPNSGIQMTQLGHVKDLAKAFIQVL 262

Query: 1028 DNPKASKQVFNISGSKYVTFDGLAKACAKAAGFPEPEIVHYNPKEFDFGKKKAFPFRDQH 1207
             N KAS+QVFNISG KYVTFDGLAKACAKAAGFPEPEIVHYNPK+FDFGKKKAFPFRDQH
Sbjct: 263  GNEKASQQVFNISGEKYVTFDGLAKACAKAAGFPEPEIVHYNPKDFDFGKKKAFPFRDQH 322

Query: 1208 FFASIDKATQVLGWTPEFDLVEGLADSYNLDFGRGTFRKAADFTTDDMILSKKLVL 1375
            FFASIDKA  VLGW PEFDLVEGLADSYNLDFGRGT+RK ADF TDD+IL K LVL
Sbjct: 323  FFASIDKAKHVLGWEPEFDLVEGLADSYNLDFGRGTYRKEADFFTDDLILGKSLVL 378


>XP_010458216.1 PREDICTED: chloroplast stem-loop binding protein of 41 kDa b,
            chloroplastic [Camelina sativa]
          Length = 379

 Score =  626 bits (1614), Expect = 0.0
 Identities = 309/386 (80%), Positives = 339/386 (87%)
 Frame = +2

Query: 218  MAQMVAIRSRSPSTIIAGXXXXXXXXXXXXDFNGARLSFSVQNKKRTCQTRKASLEITAS 397
            MA+M+ ++   PS  +              DFNGA+L   VQ K++  Q  K  L ++AS
Sbjct: 1    MAKMMMLQQHQPSFSLL--------TSSLSDFNGAKLHLQVQYKRKVHQP-KGGLYVSAS 51

Query: 398  GAKKILIMGGTRFIGIFLSRLLVKEGHQVTLFTRGKAPIAQQLPGESDQDFADFSSKILH 577
              KKILIMGGTRFIG+FLSRLLVKEGHQVTLFTRGK+PIA+QLPGESDQDFADFSSKILH
Sbjct: 52   SEKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILH 111

Query: 578  LKGDRQDFEFVKSSVSAEGFDVVYDINGREAVEVEPILDALPKLEQYIYCSSAGVYLKSD 757
            LKGDR+D++FVKSS+SAEGFDVVYDINGREA EVEPI+DALPKLEQYIYCSSAGVYLKSD
Sbjct: 112  LKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIDALPKLEQYIYCSSAGVYLKSD 171

Query: 758  ILPHAEVDAVDPKSRHKGKLETESLLESKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 937
            ILPH E DAVDPKSRHKGKLETESLL++KGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA
Sbjct: 172  ILPHCEEDAVDPKSRHKGKLETESLLQTKGVNWTSIRPVYIYGPLNYNPVEEWFFHRLKA 231

Query: 938  GRPIPIPGSGKQITQLGHVKDLATAFIQVLDNPKASKQVFNISGSKYVTFDGLAKACAKA 1117
            GRPIP+P SG QI+QLGHVKDLATAF+ VL N KAS+++FNISG KYVTFDGLA+ACAKA
Sbjct: 232  GRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASREIFNISGDKYVTFDGLARACAKA 291

Query: 1118 AGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASIDKATQVLGWTPEFDLVEGLADSYNL 1297
             GFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFAS++KA +VLGW PEFDLVEGL DSYNL
Sbjct: 292  GGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKRVLGWKPEFDLVEGLTDSYNL 351

Query: 1298 DFGRGTFRKAADFTTDDMILSKKLVL 1375
            DFGRGTFRK ADFTTDDMILSKKLVL
Sbjct: 352  DFGRGTFRKEADFTTDDMILSKKLVL 377


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