BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00045171
         (557 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subc...    56   7e-06
gb|ABA94267.1| retrotransposon protein, putative, unclassified [...    55   9e-06
emb|CAH67900.1| OSIGBa0115K01-H0319F09.6 [Oryza sativa Indica Gr...    55   9e-06
emb|CAE02825.1| OSJNBa0043A12.30 [Oryza sativa Japonica Group]         55   9e-06
emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group]         55   9e-06

>gb|ABA97831.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1564

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 323  IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 490
            +  YPL ++L+  + + R+ K A+ L EFDL FEPR+A K Q +ADF+ ++ PV+DP
Sbjct: 919  VTSYPLGQILHNREGTGRVVKWAIELAEFDLHFEPRHAIKSQVLADFIAEWAPVDDP 975


>gb|ABA94267.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 270

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = +2

Query: 311 WDKAIKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVED 487
           W   +  YPL ++L+  + + R+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P  +
Sbjct: 189 WVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPE 248

Query: 488 P 490
           P
Sbjct: 249 P 249


>emb|CAH67900.1| OSIGBa0115K01-H0319F09.6 [Oryza sativa Indica Group]
          Length = 1917

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 323  IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 490
            +  YPL ++L+  + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P  +P
Sbjct: 1251 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1307


>emb|CAE02825.1| OSJNBa0043A12.30 [Oryza sativa Japonica Group]
          Length = 1827

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 323  IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 490
            +  YPL ++L+  + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P  +P
Sbjct: 1234 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1290


>emb|CAE05649.2| OSJNBa0038O10.15 [Oryza sativa Japonica Group]
          Length = 1989

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 323  IKDYPLREVLYRSDMSRRIAK*AVALGEFDLTFEPRNAHKWQAMADFLTDF-PVEDP 490
            +  YPL ++L+  + +RR+ K A+ L EFDL FEPR+A K QA+ADF+ ++ P  +P
Sbjct: 1323 VTSYPLGQILHNREGTRRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEP 1379