BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00044856
         (563 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005847921.1| hypothetical protein CHLNCDRAFT_35273 [Chlor...   166   3e-39
gb|AAP79212.1| photosystem II protein PSII10 [Bigelowiella natans]    155   5e-36
ref|XP_002945815.1| hypothetical protein VOLCADRAFT_109549 [Volv...   149   4e-34
dbj|BAA78585.1| hypothetical protein [Chlamydomonas sp. HS-5]         146   3e-33
gb|ACF24546.1| photosystem II protein PSII10 [Gymnochlora stellata]   146   3e-33
emb|CCC15106.1| 10 kDa photosystem II polypeptide [Lepidodinium ...   145   9e-33
ref|XP_005652306.1| photosystem II protein PsbR, partial [Coccom...   144   2e-32
ref|XP_001696588.1| 10 kDa photosystem II polypeptide [Chlamydom...   143   4e-32
ref|XP_002984174.1| hypothetical protein SELMODRAFT_180828 [Sela...   100   4e-19
ref|XP_002972260.1| hypothetical protein SELMODRAFT_231914 [Sela...    99   1e-18
ref|XP_004251952.1| PREDICTED: photosystem II 10 kDa polypeptide...    97   4e-18
ref|XP_006344915.1| PREDICTED: photosystem II 10 kDa polypeptide...    96   6e-18
gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]    96   6e-18
gb|AGS13734.1| chloroplast photosystem II protein [Brassica rapa...    95   1e-17
ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...    94   2e-17
gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like pr...    94   3e-17
gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like pr...    94   3e-17
gb|AAO32060.1| photosystem II 10kDa polypeptide, partial [Brassi...    93   4e-17
gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]       93   4e-17
sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa polyp...    93   5e-17

>ref|XP_005847921.1| hypothetical protein CHLNCDRAFT_35273 [Chlorella variabilis]
           gi|307107577|gb|EFN55819.1| hypothetical protein
           CHLNCDRAFT_35273 [Chlorella variabilis]
          Length = 144

 Score =  166 bits (421), Expect = 3e-39
 Identities = 82/140 (58%), Positives = 98/140 (70%)
 Frame = +2

Query: 77  ATPQKSFLGAQLSSTTAKRPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQGISKK 256
           A  Q +  G  L  + A+   +V+  +VASG KK+DI   G  SI NE ++ N+ G SK 
Sbjct: 3   ALTQSACFGKTLPVSGARARKSVNTTVVASGAKKIDISKQGLNSIENETVKLNLMGKSKT 62

Query: 257 MEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWF 436
           ME KGW+D QG+KGKGYGVYRFA KYGANVDGYSPIYTPD+WS  G  Y LG KGL+AW 
Sbjct: 63  MESKGWVDPQGRKGKGYGVYRFANKYGANVDGYSPIYTPDTWSESGDSYKLGTKGLLAWA 122

Query: 437 LLVSTLLGVGVFLVVSTSQL 496
            L+  LLGVGV LVVSTS +
Sbjct: 123 GLIVVLLGVGVNLVVSTSAI 142


>gb|AAP79212.1| photosystem II protein PSII10 [Bigelowiella natans]
          Length = 197

 Score =  155 bits (393), Expect = 5e-36
 Identities = 78/133 (58%), Positives = 95/133 (71%)
 Frame = +2

Query: 98  LGAQLSSTTAKRPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWL 277
           LGA +++ +  R AA SR  V    K+VDIK  G  SI++E I+ N+QG S+ M  K W+
Sbjct: 66  LGAPMNALSRTR-AAPSRTAVNFKVKQVDIKKKGLESISDETIQQNLQGRSRAMSDKNWV 124

Query: 278 DSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLL 457
           D QG+KG+GYGVYRF KKYGANVDGYSPIYTPD WS  G  Y LG   LIAW +LV TLL
Sbjct: 125 DPQGRKGRGYGVYRFQKKYGANVDGYSPIYTPDIWSESGNSYKLGTNALIAWLVLVVTLL 184

Query: 458 GVGVFLVVSTSQL 496
           G+G  L++STSQL
Sbjct: 185 GIGANLIISTSQL 197


>ref|XP_002945815.1| hypothetical protein VOLCADRAFT_109549 [Volvox carteri f.
           nagariensis] gi|300268630|gb|EFJ52810.1| hypothetical
           protein VOLCADRAFT_109549 [Volvox carteri f.
           nagariensis]
          Length = 141

 Score =  149 bits (377), Expect = 4e-34
 Identities = 76/125 (60%), Positives = 88/125 (70%), Gaps = 3/125 (2%)
 Frame = +2

Query: 131 RPAAVSRVIV---ASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGK 301
           RP   SRV+V   ASGG K DI   G  SI +E+++ N+ G S+ M  K W DS G+KGK
Sbjct: 15  RPRVSSRVVVKPVASGGGKTDITKVGLNSIEDEVVKMNLMGKSRFMNNKEWKDSSGRKGK 74

Query: 302 GYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVV 481
           GYGVYR+A KYGANVDGYSPIYTPD W+  G  Y LG KGLIAW  LV  LL VGV L++
Sbjct: 75  GYGVYRYADKYGANVDGYSPIYTPDLWTESGDSYKLGTKGLIAWAGLVLVLLAVGVNLII 134

Query: 482 STSQL 496
           STSQL
Sbjct: 135 STSQL 139


>dbj|BAA78585.1| hypothetical protein [Chlamydomonas sp. HS-5]
          Length = 128

 Score =  146 bits (369), Expect = 3e-33
 Identities = 74/123 (60%), Positives = 88/123 (71%), Gaps = 2/123 (1%)
 Frame = +2

Query: 134 PAAVSRVI--VASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGY 307
           PA V + +  VASGG KVDI  +G   I +  ++ N++G S+ M+ K W+D QG+KGKGY
Sbjct: 4   PARVRKSLKPVASGGGKVDITKAGLEGIDDPTVQQNLKGRSRYMKDKNWVDPQGRKGKGY 63

Query: 308 GVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVST 487
           GVYRF  KYGANVDGYSPIYT D W+  G  Y LG KGLIAW  LV  LLGVGV LV+ST
Sbjct: 64  GVYRFEDKYGANVDGYSPIYTADQWTESGASYKLGTKGLIAWAGLVLVLLGVGVNLVIST 123

Query: 488 SQL 496
           SQL
Sbjct: 124 SQL 126


>gb|ACF24546.1| photosystem II protein PSII10 [Gymnochlora stellata]
          Length = 165

 Score =  146 bits (369), Expect = 3e-33
 Identities = 73/120 (60%), Positives = 84/120 (70%)
 Frame = +2

Query: 137 AAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGYGVY 316
           +A SR       KKVDIKN G  SI +  I+ N+QG S+ ME KGW+DSQG+KGKG GVY
Sbjct: 46  SAPSRTACFMKVKKVDIKNQGLNSIGDATIQANLQGRSRAMENKGWVDSQGRKGKGLGVY 105

Query: 317 RFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVSTSQL 496
           RF KKYGANVDGYSPIYTPD W+  G  Y LG   LIAW  LV  LL +G  L++STSQL
Sbjct: 106 RFEKKYGANVDGYSPIYTPDIWAESGNSYKLGTNALIAWAGLVVVLLAIGANLIISTSQL 165


>emb|CCC15106.1| 10 kDa photosystem II polypeptide [Lepidodinium chlorophorum]
          Length = 193

 Score =  145 bits (365), Expect = 9e-33
 Identities = 65/116 (56%), Positives = 88/116 (75%)
 Frame = +2

Query: 149 RVIVASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGYGVYRFAK 328
           ++++  GGK   + N+G +S+ + +++NN++G+S+ M KKGW+DSQG+KGKG+GVYRFA 
Sbjct: 78  QLVIVEGGKGGKV-NTGLSSVEDVVVKNNLEGVSRFMNKKGWVDSQGRKGKGFGVYRFAS 136

Query: 329 KYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVSTSQL 496
           KYG N+DGYSPIY PD WS  G  + LG KGLIAW  L+  LLGVG  L+V TSQL
Sbjct: 137 KYGTNIDGYSPIYRPDDWSETGDTFSLGTKGLIAWAGLIVVLLGVGGTLIVQTSQL 192


>ref|XP_005652306.1| photosystem II protein PsbR, partial [Coccomyxa subellipsoidea
           C-169] gi|384254288|gb|EIE27762.1| photosystem II
           protein PsbR, partial [Coccomyxa subellipsoidea C-169]
          Length = 109

 Score =  144 bits (362), Expect = 2e-32
 Identities = 67/107 (62%), Positives = 79/107 (73%)
 Frame = +2

Query: 176 KVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGY 355
           K DIK  G  SI + +++ N+ GIS+KM  K W DSQG+KGKG+GVYRFA KYGANVDGY
Sbjct: 1   KTDIKKQGLESIKDPVVKANLMGISRKMSDKNWTDSQGRKGKGFGVYRFASKYGANVDGY 60

Query: 356 SPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVSTSQL 496
           SPIYTPD W+  G  Y LG KGL+AW  LV+ LL VG  L+ STSQL
Sbjct: 61  SPIYTPDVWAETGDSYSLGTKGLLAWAGLVTVLLAVGATLIYSTSQL 107


>ref|XP_001696588.1| 10 kDa photosystem II polypeptide [Chlamydomonas reinhardtii]
           gi|158282813|gb|EDP08565.1| 10 kDa photosystem II
           polypeptide [Chlamydomonas reinhardtii]
          Length = 121

 Score =  143 bits (360), Expect = 4e-32
 Identities = 69/113 (61%), Positives = 81/113 (71%)
 Frame = +2

Query: 158 VASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGYGVYRFAKKYG 337
           VASGG K DI   G  SI + +++ N+ G S+ M KK W D+ G+KGKGYGVYR+  KYG
Sbjct: 7   VASGGGKTDITKVGLNSIEDPVVKQNLMGKSRFMNKKDWKDASGRKGKGYGVYRYEDKYG 66

Query: 338 ANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVSTSQL 496
           ANVDGYSPIYTPD W+  G  Y LG KGLIAW  LV  LL VGV L++STSQL
Sbjct: 67  ANVDGYSPIYTPDLWTESGDSYTLGTKGLIAWAGLVLVLLAVGVNLIISTSQL 119


>ref|XP_002984174.1| hypothetical protein SELMODRAFT_180828 [Selaginella moellendorffii]
           gi|300148023|gb|EFJ14684.1| hypothetical protein
           SELMODRAFT_180828 [Selaginella moellendorffii]
          Length = 135

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 63/146 (43%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
 Frame = +2

Query: 71  AVATPQKSFLGAQLS-STTAKR--PAAVSRVIV-ASGGKKVDIKNSGTASIANEIIRNNI 238
           A    + +F G+ L+ +  A R  PA   R+ V ASGGKK+  K                
Sbjct: 2   AAVLERSAFCGSSLARAPVAARGLPALSIRLTVTASGGKKISTKTP-------------- 47

Query: 239 QGISKKMEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPK 418
            G S  +  K  +D+ G+  KG GVY+F KKYGANVDGYSPIYTPD WS  G  Y  G  
Sbjct: 48  LGPSGDLTFKSGVDASGRGAKGKGVYQFTKKYGANVDGYSPIYTPDEWSPSGDVYSGGQT 107

Query: 419 GLIAWFLLVSTLLGVGVFLVVSTSQL 496
           GL+ W + +  +L  GVFLV STS L
Sbjct: 108 GLLLWAITLGGVLLAGVFLVYSTSAL 133


>ref|XP_002972260.1| hypothetical protein SELMODRAFT_231914 [Selaginella moellendorffii]
           gi|300159727|gb|EFJ26346.1| hypothetical protein
           SELMODRAFT_231914 [Selaginella moellendorffii]
          Length = 135

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 63/146 (43%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
 Frame = +2

Query: 71  AVATPQKSFLGAQLS-STTAKR--PAAVSRVIV-ASGGKKVDIKNSGTASIANEIIRNNI 238
           A    + +F G+ L+ +  A R  PA  +R+ V A GGKK+  K                
Sbjct: 2   AAVLERSAFCGSSLARAPVAARGLPALSTRLTVTARGGKKISTKAP-------------- 47

Query: 239 QGISKKMEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPK 418
            G S  +  K  LD+ G+  KG GVY+F KKYGANVDGYSPIYTPD WS  G  Y  G  
Sbjct: 48  LGPSGDLSFKSGLDASGRGTKGKGVYQFTKKYGANVDGYSPIYTPDEWSPSGDVYTGGQT 107

Query: 419 GLIAWFLLVSTLLGVGVFLVVSTSQL 496
           GL+ W + +  +L  GVFLV STS L
Sbjct: 108 GLLLWAITLGGVLLAGVFLVYSTSAL 133


>ref|XP_004251952.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
           isoform 2 [Solanum lycopersicum]
          Length = 137

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 57/145 (39%), Positives = 77/145 (53%)
 Frame = +2

Query: 62  MMQAVATPQKSFLGAQLSSTTAKRPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQ 241
           MM +  + + S L  + +S    RP+    ++ ASGGKK              I  +   
Sbjct: 7   MMMSSFSLKPSLLSVEKASIA--RPSNSKLIVKASGGKK--------------ITTDKPY 50

Query: 242 GISKKMEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKG 421
           GI+  +  +  +D+ G+K KG GVY+F KKYGANVDGYSPIY PD WS  G  Y  G  G
Sbjct: 51  GINGGLNLQDGVDASGRKAKGKGVYQFVKKYGANVDGYSPIYNPDEWSPSGDVYVGGTTG 110

Query: 422 LIAWFLLVSTLLGVGVFLVVSTSQL 496
           L  W + ++ LL  G  LV +TS L
Sbjct: 111 LALWAITLAGLLAGGALLVYNTSSL 135


>ref|XP_006344915.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic-like
           isoform X1 [Solanum tuberosum]
          Length = 137

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 58/145 (40%), Positives = 76/145 (52%)
 Frame = +2

Query: 62  MMQAVATPQKSFLGAQLSSTTAKRPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQ 241
           MM +  + + S L  + +S    RP+    ++ ASGGKK              I  N   
Sbjct: 7   MMMSSFSLKPSLLRVEKASIA--RPSNSKLIVKASGGKK--------------ITTNKPY 50

Query: 242 GISKKMEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKG 421
           GI+  +  +  +D+ G+K KG GVY+F KKYGANVDGYSPIY PD WS  G  Y  G  G
Sbjct: 51  GINGGLNLQDGVDASGRKAKGKGVYQFVKKYGANVDGYSPIYNPDEWSPSGDVYVGGTTG 110

Query: 422 LIAWFLLVSTLLGVGVFLVVSTSQL 496
           L  W + +  LL  G  LV +TS L
Sbjct: 111 LALWAVTLVGLLAGGALLVYNTSAL 135


>gb|ACZ54010.1| chloroplast photosystem II protein [Wolffia arrhiza]
          Length = 138

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 55/122 (45%), Positives = 68/122 (55%)
 Frame = +2

Query: 131 RPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGYG 310
           RPA+    + ASGGKK+                    GI   M+ K  LD+ G+KGKG G
Sbjct: 30  RPAS-GLTVKASGGKKIKTDTPF--------------GIGGGMKLKDGLDASGRKGKGKG 74

Query: 311 VYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVSTS 490
           VY+F  KYGANVDGYSPIY+PD WS  G  Y  G  GL+ W + ++ LL  G  LV +TS
Sbjct: 75  VYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAVTLAGLLAGGALLVYNTS 134

Query: 491 QL 496
            L
Sbjct: 135 AL 136


>gb|AGS13734.1| chloroplast photosystem II protein [Brassica rapa subsp. oleifera]
          Length = 138

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 54/145 (37%), Positives = 74/145 (51%)
 Frame = +2

Query: 62  MMQAVATPQKSFLGAQLSSTTAKRPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQ 241
           M+ +V      F   ++S+         S  IVASG KK+                    
Sbjct: 6   MLSSVTLKPAGFTVEKMSARGLPSLTRTSFKIVASGVKKIKTDKPF-------------- 51

Query: 242 GISKKMEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKG 421
           G++  M+ +  +D+ G+KGKGYGVY+F  KYGANVDGYSPIY  + WS GG  Y  G  G
Sbjct: 52  GVNGSMDLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSPGGDVYKGGVTG 111

Query: 422 LIAWFLLVSTLLGVGVFLVVSTSQL 496
           L  W + ++ +L  G  LV +TS L
Sbjct: 112 LAIWAVTLAGILAGGALLVYNTSAL 136


>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 52/114 (45%), Positives = 64/114 (56%)
 Frame = +2

Query: 155 IVASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGYGVYRFAKKY 334
           + ASGGKK+                    GI   M+    LD+ G+KGKG GVY+F  KY
Sbjct: 38  VEASGGKKIKTDKP--------------YGIGGGMKLSDGLDASGRKGKGKGVYQFVDKY 83

Query: 335 GANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVSTSQL 496
           GANVDGYSPIY+PD WS GG  Y  G  GL+ W + ++ LL  G  LV +TS L
Sbjct: 84  GANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTLAGLLLGGALLVYNTSAL 137


>gb|ADB08698.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
           arrhiza] gi|339716046|gb|AEJ88270.1| putative
           chloroplast photosystem II 10 kDa protein [Wolffia
           arrhiza]
          Length = 138

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 54/122 (44%), Positives = 67/122 (54%)
 Frame = +2

Query: 131 RPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGYG 310
           RPA+ +  + ASGGKK+                    G    M+ K  LD+ G+KGKG G
Sbjct: 30  RPAS-ALTVKASGGKKIKTDTPF--------------GTGGGMKLKDGLDASGRKGKGKG 74

Query: 311 VYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVSTS 490
           VY+F  KYGANVDGYSPIY+PD WS  G  Y  G  GL+ W   ++ LL  G  LV +TS
Sbjct: 75  VYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAATLAGLLAGGALLVYNTS 134

Query: 491 QL 496
            L
Sbjct: 135 AL 136


>gb|ADB08693.1| chloroplast photosystem II 10 kDa protein-like protein [Wolffia
           arrhiza] gi|351066200|gb|AEQ39074.1| putative
           chloroplast photosystem II 10 kDa protein [Wolffia
           arrhiza]
          Length = 138

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 54/122 (44%), Positives = 67/122 (54%)
 Frame = +2

Query: 131 RPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQGQKGKGYG 310
           RPA+ +  + ASGGKK+                    G    M+ K  LD+ G+KGKG G
Sbjct: 30  RPAS-ALTVKASGGKKIKTDTPF--------------GTGGGMKLKDGLDASGRKGKGKG 74

Query: 311 VYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGVFLVVSTS 490
           VY+F  KYGANVDGYSPIY+PD WS  G  Y  G  GL+ W   ++ LL  G  LV +TS
Sbjct: 75  VYQFVDKYGANVDGYSPIYSPDEWSPSGDVYVGGKTGLLIWAATLAGLLAGGALLVYNTS 134

Query: 491 QL 496
            L
Sbjct: 135 AL 136


>gb|AAO32060.1| photosystem II 10kDa polypeptide, partial [Brassica rapa subsp.
           pekinensis]
          Length = 137

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 43/85 (50%), Positives = 55/85 (64%)
 Frame = +2

Query: 242 GISKKMEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKG 421
           G++  M+ +  LD+ G+KGKGYGVY+F  KYGANVDGYSPIY  D WS  G  Y  G  G
Sbjct: 51  GVNGSMDLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTG 110

Query: 422 LIAWFLLVSTLLGVGVFLVVSTSQL 496
           L  W + ++ +L  G  LV +TS L
Sbjct: 111 LAIWAVTLAGILAGGALLVYNTSAL 135


>gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
          Length = 140

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 43/85 (50%), Positives = 55/85 (64%)
 Frame = +2

Query: 242 GISKKMEKKGWLDSQGQKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKG 421
           G++  M+ +  LD+ G+KGKGYGVY+F  KYGANVDGYSPIY  D WS  G  Y  G  G
Sbjct: 54  GVNGSMDLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTG 113

Query: 422 LIAWFLLVSTLLGVGVFLVVSTSQL 496
           L  W + ++ +L  G  LV +TS L
Sbjct: 114 LAIWAVTLAGILAGGALLVYNTSAL 138


>sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
           Flags: Precursor gi|967968|gb|AAA74957.1| photosystem II
           10kDa polypeptide [Brassica rapa subsp. oleifera]
          Length = 141

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 53/129 (41%), Positives = 69/129 (53%)
 Frame = +2

Query: 110 LSSTTAKRPAAVSRVIVASGGKKVDIKNSGTASIANEIIRNNIQGISKKMEKKGWLDSQG 289
           L S T   P++    IVASG KK+                    G++  M+ +  +D+ G
Sbjct: 27  LPSLTRASPSSFR--IVASGVKKIKTDKPF--------------GVNGSMDLRDGVDASG 70

Query: 290 QKGKGYGVYRFAKKYGANVDGYSPIYTPDSWSTGGGKYDLGPKGLIAWFLLVSTLLGVGV 469
           +KGKGYGVY+F  KYGANVDGYSPIY  D WS  G  Y  G  GL  W + ++ +L  G 
Sbjct: 71  RKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGA 130

Query: 470 FLVVSTSQL 496
            LV +TS L
Sbjct: 131 LLVYNTSAL 139