BLASTX nr result
ID: Akebia27_contig00044681
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia27_contig00044681 (408 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320719.2| pentatricopeptide repeat-containing family p... 186 2e-45 emb|CBI38872.3| unnamed protein product [Vitis vinifera] 185 5e-45 ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containi... 185 5e-45 emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera] 184 9e-45 gb|AHB18411.1| pentatricopeptide repeat-containing protein [Goss... 180 2e-43 ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containi... 174 2e-41 ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, part... 174 2e-41 gb|EYU30557.1| hypothetical protein MIMGU_mgv1a020178mg, partial... 172 6e-41 ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi... 170 2e-40 ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily p... 168 6e-40 gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis] 167 1e-39 gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta] 167 1e-39 ref|XP_002511709.1| pentatricopeptide repeat-containing protein,... 167 1e-39 ref|XP_002511699.1| pentatricopeptide repeat-containing protein,... 167 1e-39 gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pas... 166 3e-39 ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Caps... 162 6e-38 gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabi... 162 6e-38 gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa] 161 8e-38 ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containi... 160 1e-37 gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola... 160 2e-37 >ref|XP_002320719.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] gi|550323642|gb|EEE99034.2| pentatricopeptide repeat-containing family protein [Populus trichocarpa] Length = 643 Score = 186 bits (473), Expect = 2e-45 Identities = 90/136 (66%), Positives = 108/136 (79%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK G ID+A +F +P EE+N ISWNS+I GYA+SEDG +AW+LF KMP+ Sbjct: 196 YNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKMPE 255 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSMIDGCVKCG +E A+ LFDRMP RD VSWA+MIDGY K GRVD AR LF++M Sbjct: 256 RDLISWNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEM 315 Query: 361 AVNELDVVTWNTMISG 408 E DVV +N M+ G Sbjct: 316 P--ERDVVAYNAMMGG 329 Score = 79.3 bits (194), Expect = 5e-13 Identities = 55/171 (32%), Positives = 78/171 (45%), Gaps = 47/171 (27%) Frame = +1 Query: 37 MIDVASEIFYRMPT---------EEKNSISWNSMISGYARSEDGFELAWRLF-------- 165 +I+ A IF+R EEK+ WN++I Y+ D E W + Sbjct: 65 LIEFARFIFFRHHAFEFDEKEEEEEKDPFLWNAIIKTYSHGHDPKEAMWLVSLMLENGAF 124 Query: 166 -DKMPQR-----------------------------DLVSWNSMIDGCVKCGNLEFARDL 255 DK DL N +I VKCG L A + Sbjct: 125 ADKFTLSLVLKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQV 184 Query: 256 FDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 FDRMP RD+VS+ SMIDGYVK GR+D AR +F+ + + E ++++WN++I G Sbjct: 185 FDRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRG 235 Score = 79.0 bits (193), Expect = 7e-13 Identities = 58/172 (33%), Positives = 82/172 (47%), Gaps = 42/172 (24%) Frame = +1 Query: 19 GYVKRGM--------IDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKM 174 G VK GM ++ S++F + N +IS Y + A ++FD+M Sbjct: 141 GLVKEGMQIHGLLKKLEFGSDLFLQ-----------NCLISFYVKC-GCLVRASQVFDRM 188 Query: 175 PQRDLVSWNSMIDGCVKCGNLEFARDLFD------------------------------- 261 P+RD VS+NSMIDG VK G ++ AR +FD Sbjct: 189 PKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQ 248 Query: 262 ---RMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 +MP RD +SW SMIDG VK GR++ A+ LF++M D+V+W MI G Sbjct: 249 LFAKMPERDLISWNSMIDGCVKCGRMEDAQGLFDRMP--NRDIVSWANMIDG 298 >emb|CBI38872.3| unnamed protein product [Vitis vinifera] Length = 379 Score = 185 bits (470), Expect = 5e-45 Identities = 86/136 (63%), Positives = 108/136 (79%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK GM+ A E+F MP E+KN ISWNSMISGYARSE+G +AW LF++MP+ Sbjct: 191 FNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPK 250 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSMIDGCVKCG +E A LF++MP RD VSWA+M+DGY K G +D AR LF++M Sbjct: 251 RDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEM 310 Query: 361 AVNELDVVTWNTMISG 408 E DV++ N M++G Sbjct: 311 P--ERDVISCNAMMAG 324 Score = 78.2 bits (191), Expect = 1e-12 Identities = 48/121 (39%), Positives = 64/121 (52%), Gaps = 34/121 (28%) Frame = +1 Query: 148 LAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFD---------------------- 261 +A +LFD+M +RD VS+NSMIDG VK G ++ AR+LFD Sbjct: 175 IARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARS 234 Query: 262 ------------RMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMIS 405 MP RD +SW SMIDG VK G+++ A LFN+M + DVV+W M+ Sbjct: 235 EEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMP--KRDVVSWANMVD 292 Query: 406 G 408 G Sbjct: 293 G 293 Score = 76.3 bits (186), Expect = 4e-12 Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 39/158 (24%) Frame = +1 Query: 52 SEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQR----DLVSWNSMIDGC 219 S F R ++ N WN++I ++ ED E A+ +F+ M + D S++ ++ C Sbjct: 74 SRHFGRKHRKQDNPFLWNAIIKSFSHGEDPRE-AFVIFNLMLENGVCVDKFSFSLVLKAC 132 Query: 220 -----------------------------------VKCGNLEFARDLFDRMPTRDAVSWA 294 ++CG L AR LFDRM RD+VS+ Sbjct: 133 SRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFN 192 Query: 295 SMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 SMIDGYVK G V +AR LF+ M + + ++++WN+MISG Sbjct: 193 SMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISG 230 Score = 73.9 bits (180), Expect = 2e-11 Identities = 39/92 (42%), Positives = 63/92 (68%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 WNSMIDG VK G ++ A +F +MP +++ +SW +M+ GYA+ + ++A LFD+MP+ Sbjct: 256 WNSMIDGCVKCGKMENAHHLFNQMP--KRDVVSWANMVDGYAKLGE-IDIARGLFDEMPE 312 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTR 276 RD++S N+M+ G V+ G+L A + F M +R Sbjct: 313 RDVISCNAMMAGYVQNGHLMEALNFFHDMLSR 344 >ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like [Vitis vinifera] Length = 635 Score = 185 bits (470), Expect = 5e-45 Identities = 86/136 (63%), Positives = 108/136 (79%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK GM+ A E+F MP E+KN ISWNSMISGYARSE+G +AW LF++MP+ Sbjct: 191 FNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPK 250 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSMIDGCVKCG +E A LF++MP RD VSWA+M+DGY K G +D AR LF++M Sbjct: 251 RDLISWNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEM 310 Query: 361 AVNELDVVTWNTMISG 408 E DV++ N M++G Sbjct: 311 P--ERDVISCNAMMAG 324 Score = 78.2 bits (191), Expect = 1e-12 Identities = 48/121 (39%), Positives = 64/121 (52%), Gaps = 34/121 (28%) Frame = +1 Query: 148 LAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFD---------------------- 261 +A +LFD+M +RD VS+NSMIDG VK G ++ AR+LFD Sbjct: 175 IARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARS 234 Query: 262 ------------RMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMIS 405 MP RD +SW SMIDG VK G+++ A LFN+M + DVV+W M+ Sbjct: 235 EEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMP--KRDVVSWANMVD 292 Query: 406 G 408 G Sbjct: 293 G 293 Score = 76.3 bits (186), Expect = 4e-12 Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 39/158 (24%) Frame = +1 Query: 52 SEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQR----DLVSWNSMIDGC 219 S F R ++ N WN++I ++ ED E A+ +F+ M + D S++ ++ C Sbjct: 74 SRHFGRKHRKQDNPFLWNAIIKSFSHGEDPRE-AFVIFNLMLENGVCVDKFSFSLVLKAC 132 Query: 220 -----------------------------------VKCGNLEFARDLFDRMPTRDAVSWA 294 ++CG L AR LFDRM RD+VS+ Sbjct: 133 SRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFN 192 Query: 295 SMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 SMIDGYVK G V +AR LF+ M + + ++++WN+MISG Sbjct: 193 SMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISG 230 Score = 74.3 bits (181), Expect = 2e-11 Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 40/176 (22%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 WNSMIDG VK G ++ A +F +MP +++ +SW +M+ GYA+ + ++A LFD+MP+ Sbjct: 256 WNSMIDGCVKCGKMENAHHLFNQMP--KRDVVSWANMVDGYAKLGE-IDIARGLFDEMPE 312 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAV------------------------- 285 RD++S N+M+ G V+ G+L A + F M +R + Sbjct: 313 RDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVA 372 Query: 286 ---------------SWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 ++ID Y K G +D A +F +++ + WN +I G Sbjct: 373 LHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFED--IDDKSIDHWNAIIGG 426 >emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera] Length = 690 Score = 184 bits (468), Expect = 9e-45 Identities = 86/136 (63%), Positives = 107/136 (78%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK GM+ A E+F MP E+KN ISWNSMISGYARSE+G +AW LF++MP+ Sbjct: 247 FNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEMPK 306 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSMIDGCVKCG +E A LF+ MP RD VSWA+M+DGY K G +D AR LF++M Sbjct: 307 RDLISWNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEM 366 Query: 361 AVNELDVVTWNTMISG 408 E DV++ N M++G Sbjct: 367 P--ERDVISCNAMMAG 380 Score = 77.8 bits (190), Expect = 1e-12 Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 39/158 (24%) Frame = +1 Query: 52 SEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQR----DLVSWNSMIDGC 219 S F R ++ N WN++I ++ ED E A+ +F+ M + D S++ ++ C Sbjct: 130 SRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXE-AFXIFNLMLENGVCVDKFSFSLVLKAC 188 Query: 220 -----------------------------------VKCGNLEFARDLFDRMPTRDAVSWA 294 ++CG L AR LFDRM RD+VS+ Sbjct: 189 SRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFN 248 Query: 295 SMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 SMIDGYVK G V +AR LF+ M + + ++++WN+MISG Sbjct: 249 SMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISG 286 Score = 76.6 bits (187), Expect = 3e-12 Identities = 48/121 (39%), Positives = 62/121 (51%), Gaps = 34/121 (28%) Frame = +1 Query: 148 LAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFD---------------------- 261 +A +LFD+M RD VS+NSMIDG VK G ++ AR+LFD Sbjct: 231 IARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARS 290 Query: 262 ------------RMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMIS 405 MP RD +SW SMIDG VK G+++ A LFN M + DVV+W M+ Sbjct: 291 EEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMP--KRDVVSWANMVD 348 Query: 406 G 408 G Sbjct: 349 G 349 >gb|AHB18411.1| pentatricopeptide repeat-containing protein [Gossypium hirsutum] Length = 637 Score = 180 bits (456), Expect = 2e-43 Identities = 86/136 (63%), Positives = 108/136 (79%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGY+KRGMID+A E+F MP E KN I+WNSMISGY + +DG LA LF+KMP Sbjct: 191 YNSMIDGYIKRGMIDLAKELFDVMPLENKNLITWNSMISGYTQLKDGMGLALGLFEKMPD 250 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSMI+G VKCGN+E A+ LFD+MP RD VSWA+MI+GY K G++D AR LFN+M Sbjct: 251 RDLISWNSMINGFVKCGNMEDAQILFDKMPRRDVVSWANMINGYAKVGKIDLARSLFNEM 310 Query: 361 AVNELDVVTWNTMISG 408 +E D+V N M++G Sbjct: 311 --SERDIVVCNAMMAG 324 Score = 80.5 bits (197), Expect = 2e-13 Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 43/167 (25%) Frame = +1 Query: 37 MIDVASEIFY-----RMPTEEKNSISWNSMISGYARSEDGFELAWRL---------FDKM 174 ++D A +F+ R P ++++ WN++I Y+ + E L FDK Sbjct: 64 LVDFARYVFFTYLAFRSPKQDEDPFLWNAVIKSYSHGREAQEAFIILCLMLENGVPFDKF 123 Query: 175 PQR-----------------------------DLVSWNSMIDGCVKCGNLEFARDLFDRM 267 DL N +I ++CG + +AR LFDRM Sbjct: 124 SLSLVLKACSQLGLLKEGMQVHGLLRKLNFGSDLFLQNCLISYYLRCGFIGYARQLFDRM 183 Query: 268 PTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 RD+VS+ SMIDGY+K G +D A+ LF+ M + +++TWN+MISG Sbjct: 184 SMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLENKNLITWNSMISG 230 Score = 80.5 bits (197), Expect = 2e-13 Identities = 53/137 (38%), Positives = 72/137 (52%), Gaps = 35/137 (25%) Frame = +1 Query: 103 NSMISGYARSEDGF-ELAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFD------ 261 N +IS Y R GF A +LFD+M RD VS+NSMIDG +K G ++ A++LFD Sbjct: 161 NCLISYYLRC--GFIGYARQLFDRMSMRDSVSYNSMIDGYIKRGMIDLAKELFDVMPLEN 218 Query: 262 ----------------------------RMPTRDAVSWASMIDGYVKFGRVDTARFLFNK 357 +MP RD +SW SMI+G+VK G ++ A+ LF+K Sbjct: 219 KNLITWNSMISGYTQLKDGMGLALGLFEKMPDRDLISWNSMINGFVKCGNMEDAQILFDK 278 Query: 358 MAVNELDVVTWNTMISG 408 M DVV+W MI+G Sbjct: 279 MP--RRDVVSWANMING 293 >ref|XP_006490914.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like [Citrus sinensis] Length = 634 Score = 174 bits (440), Expect = 2e-41 Identities = 80/136 (58%), Positives = 105/136 (77%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK G I+ A E+F MP E+N ISWNS+++GYA+ + G + AW++F+KMP+ Sbjct: 188 YNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPE 247 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSM+ GCVKCG ++ A+ LFD+MP RD VSWA+MIDGY K GRVD AR LF++M Sbjct: 248 RDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEM 307 Query: 361 AVNELDVVTWNTMISG 408 + DVV N M+ G Sbjct: 308 P--KRDVVACNAMMGG 321 Score = 84.0 bits (206), Expect = 2e-14 Identities = 41/92 (44%), Positives = 62/92 (67%) Frame = +1 Query: 133 EDGFELAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGY 312 E+G ++ L DL N +I V+CG LEFAR LFD+M RD+VS+ SMIDGY Sbjct: 136 EEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGY 195 Query: 313 VKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 VK G +++AR LF+ M + E ++++WN++++G Sbjct: 196 VKSGNIESARELFDSMPIRERNLISWNSVLNG 227 >ref|XP_006445271.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina] gi|557547533|gb|ESR58511.1| hypothetical protein CICLE_v10023562mg, partial [Citrus clementina] Length = 658 Score = 174 bits (440), Expect = 2e-41 Identities = 80/136 (58%), Positives = 105/136 (77%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK G I+ A E+F MP E+N ISWNS+++GYA+ + G + AW++F+KMP+ Sbjct: 245 YNSMIDGYVKSGNIESARELFDSMPIRERNLISWNSVLNGYAQLKSGLQFAWQIFEKMPE 304 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSM+ GCVKCG ++ A+ LFD+MP RD VSWA+MIDGY K GRVD AR LF++M Sbjct: 305 RDLISWNSMLHGCVKCGKMDDAQALFDKMPKRDVVSWANMIDGYAKLGRVDIARRLFDEM 364 Query: 361 AVNELDVVTWNTMISG 408 + DVV N M+ G Sbjct: 365 P--KRDVVACNAMMGG 378 Score = 84.0 bits (206), Expect = 2e-14 Identities = 41/92 (44%), Positives = 62/92 (67%) Frame = +1 Query: 133 EDGFELAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGY 312 E+G ++ L DL N +I V+CG LEFAR LFD+M RD+VS+ SMIDGY Sbjct: 193 EEGLQIHGLLRKVAFGSDLFLQNCLISLYVRCGYLEFARQLFDKMGIRDSVSYNSMIDGY 252 Query: 313 VKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 VK G +++AR LF+ M + E ++++WN++++G Sbjct: 253 VKSGNIESARELFDSMPIRERNLISWNSVLNG 284 >gb|EYU30557.1| hypothetical protein MIMGU_mgv1a020178mg, partial [Mimulus guttatus] Length = 568 Score = 172 bits (435), Expect = 6e-41 Identities = 80/136 (58%), Positives = 103/136 (75%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +N MIDGYVK GM+ A E+F MP++ KN +SWNSMISGY + E+GFE AW LFDKMP+ Sbjct: 157 YNLMIDGYVKCGMVSAARELFDIMPSDVKNLVSWNSMISGYVKLENGFEYAWDLFDKMPE 216 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDLVSWN M+D C K GN+ A++LFD+M RD VSWASM+DGY K G VD AR+ F+ Sbjct: 217 RDLVSWNLMLDCCAKNGNMNLAQNLFDKMSKRDVVSWASMVDGYAKVGNVDAARYFFD-- 274 Query: 361 AVNELDVVTWNTMISG 408 A+ + DV++ N M++G Sbjct: 275 AMPQRDVISCNAMMAG 290 Score = 74.7 bits (182), Expect = 1e-11 Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 3/103 (2%) Frame = +1 Query: 103 NSMISGYARSEDGFELAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFDRMPT--R 276 NS+I Y + + R+FD+M +D S+N MIDG VKCG + AR+LFD MP+ + Sbjct: 127 NSLICMYIKCGI-LQFGRRIFDRMLIKDSFSYNLMIDGYVKCGMVSAARELFDIMPSDVK 185 Query: 277 DAVSWASMIDGYVKF-GRVDTARFLFNKMAVNELDVVTWNTMI 402 + VSW SMI GYVK + A LF+KM E D+V+WN M+ Sbjct: 186 NLVSWNSMISGYVKLENGFEYAWDLFDKMP--ERDLVSWNLML 226 Score = 72.4 bits (176), Expect = 6e-11 Identities = 37/75 (49%), Positives = 51/75 (68%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 D+ NS+I +KCG L+F R +FDRM +D+ S+ MIDGYVK G V AR LF+ M Sbjct: 122 DVFLQNSLICMYIKCGILQFGRRIFDRMLIKDSFSYNLMIDGYVKCGMVSAARELFDIMP 181 Query: 364 VNELDVVTWNTMISG 408 + ++V+WN+MISG Sbjct: 182 SDVKNLVSWNSMISG 196 Score = 58.9 bits (141), Expect = 7e-07 Identities = 33/89 (37%), Positives = 52/89 (58%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 WN M+D K G +++A +F +M +++ +SW SM+ GYA+ + + A FD MPQ Sbjct: 222 WNLMLDCCAKNGNMNLAQNLFDKM--SKRDVVSWASMVDGYAKVGN-VDAARYFFDAMPQ 278 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRM 267 RD++S N+M+ G V G A +F M Sbjct: 279 RDVISCNAMMAGYVNNGCYNEALKVFHDM 307 >ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like [Cucumis sativus] gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like [Cucumis sativus] Length = 638 Score = 170 bits (430), Expect = 2e-40 Identities = 79/136 (58%), Positives = 105/136 (77%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK G ID+A E+F MP E+KN ISWNSM+ G+A+++DG LA LF+KMP+ Sbjct: 194 YNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFAQTKDGIGLALELFEKMPE 253 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDLVSWN++I G KCG +EFA LF+RMP RD +SW++MIDGY K G + AR LF++M Sbjct: 254 RDLVSWNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEM 313 Query: 361 AVNELDVVTWNTMISG 408 + DVV +NT+++G Sbjct: 314 P--DKDVVAFNTIMAG 327 Score = 86.7 bits (213), Expect = 3e-15 Identities = 50/142 (35%), Positives = 83/142 (58%), Gaps = 6/142 (4%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEK---NSISWNSMISGYARS---EDGFELAWRL 162 WN++I Y G V + + + M E + S++ ++ AR E+G ++ L Sbjct: 93 WNAVIKSY-SHGNEPVRALVLFCMMLENGFCVDKFSFSLILKACARVCLVEEGKQIHGLL 151 Query: 163 FDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTAR 342 +L N +I ++CG++EFAR +FDRMP +D+VS+ SMIDGYVK G +D AR Sbjct: 152 MKLEIGSNLFLLNCLIAMYLRCGDIEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLAR 211 Query: 343 FLFNKMAVNELDVVTWNTMISG 408 LF+ M + + ++++WN+M+ G Sbjct: 212 ELFDSMPLEDKNLISWNSMLGG 233 Score = 73.2 bits (178), Expect = 4e-11 Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 40/176 (22%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 WN++I G+ K G I+ A +F RMP +++ ISW++MI GYA+ D ++A LFD+MP Sbjct: 259 WNTIIGGFAKCGRIEFAHSLFNRMP--KRDVISWSNMIDGYAKLGD-IKVARTLFDEMPD 315 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVS------------------------ 288 +D+V++N+++ G + G A ++F M + +S Sbjct: 316 KDVVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAAS 375 Query: 289 ----------------WASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 ++ID Y K G ++ A +F+ V++ + WN MISG Sbjct: 376 MHNYFLENGISVTGKVAVALIDMYSKCGSIENAILIFD--GVDQKGIDHWNAMISG 429 >ref|XP_007052071.1| Pentatricopeptide repeat (PPR) superfamily protein, putative [Theobroma cacao] gi|508704332|gb|EOX96228.1| Pentatricopeptide repeat (PPR) superfamily protein, putative [Theobroma cacao] Length = 637 Score = 168 bits (426), Expect = 6e-40 Identities = 82/136 (60%), Positives = 105/136 (77%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGY+K GMI +A E+F MP E+KN I+WNSMISGYA+ E G +A +LF++MP Sbjct: 191 YNSMIDGYIKTGMIHLARELFEFMPMEDKNLITWNSMISGYAQLEYGMVMALKLFEEMPD 250 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSMI+G VKCGN+E A+ LF +MP RD VSWA+MI+GY K G++D AR LF++M Sbjct: 251 RDLISWNSMINGFVKCGNMEDAQALFVKMPKRDVVSWANMINGYAKVGKIDLARRLFDEM 310 Query: 361 AVNELDVVTWNTMISG 408 E DVV N M+ G Sbjct: 311 P--ERDVVVCNAMMGG 324 Score = 78.2 bits (191), Expect = 1e-12 Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 43/167 (25%) Frame = +1 Query: 37 MIDVASEIFY-----RMPTEEKNSISWNSMISGYARSEDG---FELAWRLFDKMPQRDLV 192 ++D A +F+ R P +E + WN+ I Y+ D F + + + + D Sbjct: 64 LVDFARHVFFTHHAFRSPEQEMDPFLWNAAIKSYSHGRDAKQAFVMLCLMLENGVRFDTF 123 Query: 193 SWNSMIDGC-----------------------------------VKCGNLEFARDLFDRM 267 S + ++ C ++CG + +AR LFDRM Sbjct: 124 SLSLVLKACSRLGLMKEGMQVHGLLRKLNFGSDLFLQNCLISLYIRCGFVGYARQLFDRM 183 Query: 268 PTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 RD+VS+ SMIDGY+K G + AR LF M + + +++TWN+MISG Sbjct: 184 CRRDSVSYNSMIDGYIKTGMIHLARELFEFMPMEDKNLITWNSMISG 230 Score = 76.6 bits (187), Expect = 3e-12 Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 35/137 (25%) Frame = +1 Query: 103 NSMISGYARSEDGFE-LAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARD--------- 252 N +IS Y R GF A +LFD+M +RD VS+NSMIDG +K G + AR+ Sbjct: 161 NCLISLYIRC--GFVGYARQLFDRMCRRDSVSYNSMIDGYIKTGMIHLARELFEFMPMED 218 Query: 253 -------------------------LFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNK 357 LF+ MP RD +SW SMI+G+VK G ++ A+ LF K Sbjct: 219 KNLITWNSMISGYAQLEYGMVMALKLFEEMPDRDLISWNSMINGFVKCGNMEDAQALFVK 278 Query: 358 MAVNELDVVTWNTMISG 408 M + DVV+W MI+G Sbjct: 279 MP--KRDVVSWANMING 293 Score = 74.3 bits (181), Expect = 2e-11 Identities = 43/132 (32%), Positives = 76/132 (57%), Gaps = 5/132 (3%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 WNSMI+G+VK G ++ A +F +MP +++ +SW +MI+GYA+ +LA RLFD+MP+ Sbjct: 256 WNSMINGFVKCGNMEDAQALFVKMP--KRDVVSWANMINGYAKVGK-IDLARRLFDEMPE 312 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAV-----SWASMIDGYVKFGRVDTARF 345 RD+V N+M+ G V+ G A ++F + D + + ++ + GR+D Sbjct: 313 RDVVVCNAMMGGYVQNGYCSEALEIFYHLQRYDNLQPDNATLLIVLSAIAQLGRIDKGLA 372 Query: 346 LFNKMAVNELDV 381 + + N+ + Sbjct: 373 IHQYLEENKFSL 384 >gb|EXB76219.1| hypothetical protein L484_025573 [Morus notabilis] Length = 626 Score = 167 bits (424), Expect = 1e-39 Identities = 84/136 (61%), Positives = 104/136 (76%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK GMID+A E+F MP EEKN ++WNSMISGYA+S+ E AW LF+ MP+ Sbjct: 185 YNSMIDGYVKCGMIDLARELFDCMPLEEKNLVTWNSMISGYAQSD--LEFAWELFETMPE 242 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RD VSWN+MI+G VK G +E AR LF+RMP RD VSWA++IDGY K GR+ AR LFN+M Sbjct: 243 RDSVSWNTMINGYVKRGKIEDARSLFNRMPKRDIVSWANLIDGYSKLGRIHVARSLFNEM 302 Query: 361 AVNELDVVTWNTMISG 408 + DVV N M++G Sbjct: 303 P--DRDVVACNAMMAG 316 Score = 89.4 bits (220), Expect = 5e-16 Identities = 54/134 (40%), Positives = 74/134 (55%), Gaps = 32/134 (23%) Frame = +1 Query: 103 NSMISGYARSEDGFELAWRLFDKMPQRDLVSWNSMIDGCVKCG----------------- 231 N ++S Y R E A ++FD M +RD VS+NSMIDG VKCG Sbjct: 155 NGLVSWYLRC-GCVEFARQVFDGMQKRDSVSYNSMIDGYVKCGMIDLARELFDCMPLEEK 213 Query: 232 ---------------NLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAV 366 +LEFA +LF+ MP RD+VSW +MI+GYVK G+++ AR LFN+M Sbjct: 214 NLVTWNSMISGYAQSDLEFAWELFETMPERDSVSWNTMINGYVKRGKIEDARSLFNRMP- 272 Query: 367 NELDVVTWNTMISG 408 + D+V+W +I G Sbjct: 273 -KRDIVSWANLIDG 285 Score = 83.2 bits (204), Expect = 4e-14 Identities = 40/75 (53%), Positives = 54/75 (72%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 DL N ++ ++CG +EFAR +FD M RD+VS+ SMIDGYVK G +D AR LF+ M Sbjct: 150 DLYLQNGLVSWYLRCGCVEFARQVFDGMQKRDSVSYNSMIDGYVKCGMIDLARELFDCMP 209 Query: 364 VNELDVVTWNTMISG 408 + E ++VTWN+MISG Sbjct: 210 LEEKNLVTWNSMISG 224 >gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta] Length = 615 Score = 167 bits (424), Expect = 1e-39 Identities = 79/136 (58%), Positives = 108/136 (79%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK G+I+ A E+F MP+E+KN ISWNSMI+GYA+ DG ++A LFD+MP+ Sbjct: 192 YNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEMPE 251 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 +DL+SWNS+IDG VK G +E A+DLFD+MP RD V+WA+M+DGY K G V A+ LF++M Sbjct: 252 KDLISWNSLIDGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQM 311 Query: 361 AVNELDVVTWNTMISG 408 + DVV +N+M++G Sbjct: 312 P--QRDVVAYNSMMAG 325 Score = 90.5 bits (223), Expect = 2e-16 Identities = 52/120 (43%), Positives = 66/120 (55%), Gaps = 34/120 (28%) Frame = +1 Query: 151 AWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARD-------------------------- 252 A ++FD+M QRD VS+NSMIDG VKCG +E AR+ Sbjct: 177 ARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQRA 236 Query: 253 --------LFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 LFD MP +D +SW S+IDGYVK GR++ A+ LF+KM DVVTW TM+ G Sbjct: 237 DGVDIASNLFDEMPEKDLISWNSLIDGYVKHGRIEDAKDLFDKMP--RRDVVTWATMVDG 294 Score = 77.8 bits (190), Expect = 1e-12 Identities = 38/75 (50%), Positives = 54/75 (72%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 DL N +I +KCG L FAR +FDRM RD+VS+ SMIDGYVK G +++AR LF+ M Sbjct: 157 DLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMP 216 Query: 364 VNELDVVTWNTMISG 408 + ++++WN+MI+G Sbjct: 217 SEKKNLISWNSMING 231 Score = 75.5 bits (184), Expect = 7e-12 Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 41/177 (23%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGF-ELAWRLFDKMP 177 WNS+IDGYVK G I+ A ++F +MP ++ ++W +M+ GYA+ GF A LFD+MP Sbjct: 257 WNSLIDGYVKHGRIEDAKDLFDKMP--RRDVVTWATMVDGYAKL--GFVHQAKSLFDQMP 312 Query: 178 QRDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVS----------------------- 288 QRD+V++NSM+ G V+ A D+F+ M +S Sbjct: 313 QRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAM 372 Query: 289 -----------------WASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 ++ID Y K G + A +F ++ +D WN MI G Sbjct: 373 DMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSID--HWNAMIGG 427 >ref|XP_002511709.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548889|gb|EEF50378.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 450 Score = 167 bits (424), Expect = 1e-39 Identities = 79/136 (58%), Positives = 101/136 (74%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMI GYVK G ID+A +++ MP +N +SWNS++SGY RS++GFELAW LF+KMP+ Sbjct: 169 YNSMIAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYMRSDNGFELAWNLFEKMPE 228 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSMIDGC K G +E A+ LFD MP R +SWA+M+DGY K G VD AR F+ M Sbjct: 229 RDLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKLGYVDIARKFFDNM 288 Query: 361 AVNELDVVTWNTMISG 408 + DVV N M+SG Sbjct: 289 P--DRDVVACNAMMSG 302 Score = 79.3 bits (194), Expect = 5e-13 Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 3/91 (3%) Frame = +1 Query: 145 ELAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFDRMPT--RDAVSWASMIDGYVK 318 + A ++FDKMP RD VS+NSMI G VK GN++ AR L+D MP R+ VSW S++ GY++ Sbjct: 152 DYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYMR 211 Query: 319 FGR-VDTARFLFNKMAVNELDVVTWNTMISG 408 + A LF KM E D+++WN+MI G Sbjct: 212 SDNGFELAWNLFEKMP--ERDLISWNSMIDG 240 Score = 76.3 bits (186), Expect = 4e-12 Identities = 35/75 (46%), Positives = 54/75 (72%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 D+ N +I VKC +++AR +FD+MP RD+VS+ SMI GYVK G +D AR L++ M Sbjct: 134 DVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMP 193 Query: 364 VNELDVVTWNTMISG 408 +N ++V+WN+++SG Sbjct: 194 INWRNLVSWNSLLSG 208 >ref|XP_002511699.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548879|gb|EEF50368.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 474 Score = 167 bits (424), Expect = 1e-39 Identities = 79/136 (58%), Positives = 101/136 (74%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMI GYVK G ID+A +++ MP +N +SWNS++SGY RS++GFELAW LF+KMP+ Sbjct: 193 YNSMIAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYMRSDNGFELAWNLFEKMPE 252 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDL+SWNSMIDGC K G +E A+ LFD MP R +SWA+M+DGY K G VD AR F+ M Sbjct: 253 RDLISWNSMIDGCAKRGRMEDAQALFDTMPERTIISWANMVDGYAKLGYVDIARKFFDNM 312 Query: 361 AVNELDVVTWNTMISG 408 + DVV N M+SG Sbjct: 313 P--DRDVVACNAMMSG 326 Score = 79.3 bits (194), Expect = 5e-13 Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 3/91 (3%) Frame = +1 Query: 145 ELAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFDRMPT--RDAVSWASMIDGYVK 318 + A ++FDKMP RD VS+NSMI G VK GN++ AR L+D MP R+ VSW S++ GY++ Sbjct: 176 DYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMPINWRNLVSWNSLLSGYMR 235 Query: 319 FGR-VDTARFLFNKMAVNELDVVTWNTMISG 408 + A LF KM E D+++WN+MI G Sbjct: 236 SDNGFELAWNLFEKMP--ERDLISWNSMIDG 264 Score = 76.3 bits (186), Expect = 4e-12 Identities = 35/75 (46%), Positives = 54/75 (72%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 D+ N +I VKC +++AR +FD+MP RD+VS+ SMI GYVK G +D AR L++ M Sbjct: 158 DVFLQNCLIGLYVKCRCIDYARQVFDKMPMRDSVSYNSMIAGYVKHGNIDLARQLYDVMP 217 Query: 364 VNELDVVTWNTMISG 408 +N ++V+WN+++SG Sbjct: 218 INWRNLVSWNSLLSG 232 >gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris] Length = 617 Score = 166 bits (420), Expect = 3e-39 Identities = 81/136 (59%), Positives = 106/136 (77%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVKRG+I+ A E+F MP E KN ISWNS+ISGYA++ DG ++A LF +MP+ Sbjct: 194 FNSMIDGYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQTSDGVDIASNLFAEMPE 253 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 +DL+SWNSMIDG VK G +E A+DLFD MP RD V+WA+MIDGY K G V A+ LF++M Sbjct: 254 KDLISWNSMIDGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQM 313 Query: 361 AVNELDVVTWNTMISG 408 DVV++N+M++G Sbjct: 314 P--HRDVVSYNSMMAG 327 Score = 88.2 bits (217), Expect = 1e-15 Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 34/120 (28%) Frame = +1 Query: 151 AWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFD----------------------- 261 A ++FD+MPQRD VS+NSMIDG VK G +E AR+LFD Sbjct: 179 ARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREVKNLISWNSIISGYAQTS 238 Query: 262 -----------RMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 MP +D +SW SMIDGYVK GR++ A+ LF+ A+ DVVTW TMI G Sbjct: 239 DGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFD--AMPRRDVVTWATMIDG 296 Score = 78.6 bits (192), Expect = 9e-13 Identities = 39/75 (52%), Positives = 54/75 (72%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 DL N +I +KCG L FAR +FDRMP RD+VS+ SMIDGYVK G +++AR LF+ M Sbjct: 159 DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMP 218 Query: 364 VNELDVVTWNTMISG 408 ++++WN++ISG Sbjct: 219 REVKNLISWNSIISG 233 Score = 72.8 bits (177), Expect = 5e-11 Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGF-ELAWRLFDKMP 177 WNSMIDGYVK G I+ A ++F MP ++ ++W +MI GYA+ GF A LFD+MP Sbjct: 259 WNSMIDGYVKHGRIEDAKDLFDAMP--RRDVVTWATMIDGYAKL--GFVHQAKTLFDQMP 314 Query: 178 QRDLVSWNSMIDGCVKCGNLEFARDLFDRMP-----TRDAVSWASMIDGYVKFGRVDTA 339 RD+VS+NSM+ G V+ A ++F M + D + ++ + GR+ A Sbjct: 315 HRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKA 373 >ref|XP_006296085.1| hypothetical protein CARUB_v10025235mg [Capsella rubella] gi|482564793|gb|EOA28983.1| hypothetical protein CARUB_v10025235mg [Capsella rubella] Length = 607 Score = 162 bits (409), Expect = 6e-38 Identities = 79/136 (58%), Positives = 107/136 (78%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK G I+ A E+F MP E KN ISWNS+ISGYA++ +GF++A +LF +MP+ Sbjct: 184 FNSMIDGYVKCGSIESARELFDLMPREVKNLISWNSIISGYAQASNGFDIASKLFAEMPE 243 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 +DL+SWNSMIDG VK G +E A++LFD MP+RD V+WA+MIDGY K G V A+ LF++M Sbjct: 244 KDLISWNSMIDGYVKHGRIEDAKELFDVMPSRDVVTWATMIDGYAKLGFVHQAKTLFDQM 303 Query: 361 AVNELDVVTWNTMISG 408 DVV++N+M++G Sbjct: 304 P--HRDVVSYNSMMAG 317 Score = 94.0 bits (232), Expect = 2e-17 Identities = 54/120 (45%), Positives = 67/120 (55%), Gaps = 34/120 (28%) Frame = +1 Query: 151 AWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFD----------------------- 261 A ++FD+MPQRD VS+NSMIDG VKCG++E AR+LFD Sbjct: 169 ARQIFDRMPQRDSVSFNSMIDGYVKCGSIESARELFDLMPREVKNLISWNSIISGYAQAS 228 Query: 262 -----------RMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 MP +D +SW SMIDGYVK GR++ A+ LF+ M DVVTW TMI G Sbjct: 229 NGFDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKELFDVMP--SRDVVTWATMIDG 286 Score = 79.3 bits (194), Expect = 5e-13 Identities = 39/75 (52%), Positives = 54/75 (72%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 DL N +I +KCG L FAR +FDRMP RD+VS+ SMIDGYVK G +++AR LF+ M Sbjct: 149 DLFLHNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKCGSIESARELFDLMP 208 Query: 364 VNELDVVTWNTMISG 408 ++++WN++ISG Sbjct: 209 REVKNLISWNSIISG 223 Score = 74.3 bits (181), Expect = 2e-11 Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 6/119 (5%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGF-ELAWRLFDKMP 177 WNSMIDGYVK G I+ A E+F MP+ ++ ++W +MI GYA+ GF A LFD+MP Sbjct: 249 WNSMIDGYVKHGRIEDAKELFDVMPS--RDVVTWATMIDGYAKL--GFVHQAKTLFDQMP 304 Query: 178 QRDLVSWNSMIDGCVKCGNLEFARDLFDRMP-----TRDAVSWASMIDGYVKFGRVDTA 339 RD+VS+NSM+ G V+ A ++F M + D + ++ + GR+ A Sbjct: 305 HRDVVSYNSMMAGYVQNKYHMEALEIFSHMEKESHLSPDETTLVIVLSAIAQLGRLSKA 363 >gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila] Length = 579 Score = 162 bits (409), Expect = 6e-38 Identities = 79/136 (58%), Positives = 105/136 (77%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK G I+ ASE+F MP E KN ISWNS+ISGYA++ +G ++A +LF +MP+ Sbjct: 156 YNSMIDGYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQTSEGVDIASKLFAEMPE 215 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 +DL+SWNSMIDG VK G +E A+DLFD +P RD V+WA+MIDGY K G V A+ LF++M Sbjct: 216 KDLISWNSMIDGYVKHGRIEDAKDLFDMVPRRDVVTWATMIDGYAKLGFVHQAKTLFDQM 275 Query: 361 AVNELDVVTWNTMISG 408 DVV +N+M++G Sbjct: 276 P--HRDVVAYNSMMAG 289 Score = 91.7 bits (226), Expect = 1e-16 Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 34/120 (28%) Frame = +1 Query: 151 AWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARDLFD----------------------- 261 A ++FD+MPQRD VS+NSMIDG VKCG++E A +LFD Sbjct: 141 ARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQTS 200 Query: 262 -----------RMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 MP +D +SW SMIDGYVK GR++ A+ LF+ V DVVTW TMI G Sbjct: 201 EGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFD--MVPRRDVVTWATMIDG 258 Score = 77.8 bits (190), Expect = 1e-12 Identities = 38/75 (50%), Positives = 53/75 (70%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 DL N +I +KCG L FAR +FDRMP RD+VS+ SMIDGYVK G +++A LF+ M Sbjct: 121 DLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASELFDLMP 180 Query: 364 VNELDVVTWNTMISG 408 ++++WN++ISG Sbjct: 181 REMKNLISWNSLISG 195 Score = 69.7 bits (169), Expect = 4e-10 Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 6/119 (5%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGF-ELAWRLFDKMP 177 WNSMIDGYVK G I+ A ++F +P ++ ++W +MI GYA+ GF A LFD+MP Sbjct: 221 WNSMIDGYVKHGRIEDAKDLFDMVP--RRDVVTWATMIDGYAKL--GFVHQAKTLFDQMP 276 Query: 178 QRDLVSWNSMIDGCVKCGNLEFARDLFDRMP-----TRDAVSWASMIDGYVKFGRVDTA 339 RD+V++NSM+ G V+ A ++F M + D + ++ + GR+ A Sbjct: 277 HRDVVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKA 335 >gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa] Length = 612 Score = 161 bits (408), Expect = 8e-38 Identities = 78/136 (57%), Positives = 104/136 (76%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK GMI+ A +F MP E+KN ISWN MISGYA+ DG +A +LFD+MP+ Sbjct: 190 YNSMIDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVAKKLFDEMPE 249 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 +DL+SWNS+IDG VK G +E A+ LF++MP RD V+WA+M+DGY K G V A+ LF++M Sbjct: 250 KDLISWNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRM 309 Query: 361 AVNELDVVTWNTMISG 408 + DVV +N+MI+G Sbjct: 310 PLR--DVVAYNSMITG 323 Score = 93.6 bits (231), Expect = 3e-17 Identities = 56/131 (42%), Positives = 70/131 (53%), Gaps = 34/131 (25%) Frame = +1 Query: 118 GYARSEDGFELAWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFAR---------------- 249 GYAR ++FD+MP+RD VS+NSMIDG VKCG +E AR Sbjct: 173 GYAR---------QVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEKKNLISW 223 Query: 250 ------------------DLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNEL 375 LFD MP +D +SW S+IDGYVK GR++ A+ LFNKM + Sbjct: 224 NFMISGYAQRADGVNVAKKLFDEMPEKDLISWNSLIDGYVKHGRMEDAKSLFNKMP--KR 281 Query: 376 DVVTWNTMISG 408 DVVTW TM+ G Sbjct: 282 DVVTWATMVDG 292 Score = 80.9 bits (198), Expect = 2e-13 Identities = 39/75 (52%), Positives = 54/75 (72%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 DL N +I +KCG L +AR +FDRMP RD+VS+ SMIDGYVK G +++AR LF+ M Sbjct: 155 DLYLQNCLIGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMP 214 Query: 364 VNELDVVTWNTMISG 408 + ++++WN MISG Sbjct: 215 KEKKNLISWNFMISG 229 Score = 71.2 bits (173), Expect = 1e-10 Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 6/119 (5%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGF-ELAWRLFDKMP 177 WNS+IDGYVK G ++ A +F +MP +++ ++W +M+ GYA+ GF A LFD+MP Sbjct: 255 WNSLIDGYVKHGRMEDAKSLFNKMP--KRDVVTWATMVDGYAKL--GFVHQAKSLFDRMP 310 Query: 178 QRDLVSWNSMIDGCVKCGNLEFARDLFDRMP-----TRDAVSWASMIDGYVKFGRVDTA 339 RD+V++NSMI G V+ + A +F+ M + D + ++ + GR+ A Sbjct: 311 LRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKA 369 >ref|XP_006347873.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic-like [Solanum tuberosum] Length = 625 Score = 160 bits (406), Expect = 1e-37 Identities = 74/136 (54%), Positives = 100/136 (73%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +N+MIDGYVK GM+DVA +F MP E +N +SWN+M++GY + + GF++AW LFDKMP+ Sbjct: 191 YNTMIDGYVKCGMLDVACRLFDFMPIEMRNLVSWNAMLTGYVKLDQGFDVAWELFDKMPE 250 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 RDLVSWN M+ CVK GN E A LFD +P +D VSWA M+DGY K G++D AR F+ M Sbjct: 251 RDLVSWNLMLYCCVKSGNAEKATALFDMIPKKDVVSWAIMVDGYAKIGKIDIARRYFDDM 310 Query: 361 AVNELDVVTWNTMISG 408 V DV++ N +++G Sbjct: 311 PVR--DVISCNAIMAG 324 Score = 84.0 bits (206), Expect = 2e-14 Identities = 61/140 (43%), Positives = 79/140 (56%), Gaps = 12/140 (8%) Frame = +1 Query: 19 GYVKRGM--------IDVASEIFYRMPTEEKNSISWNSMISGYARSEDGF-ELAWRLFDK 171 G+VKRGM I S++F + N +IS Y R GF E +FD+ Sbjct: 136 GFVKRGMQVHGLLRKIGFGSDVFLQ-----------NCLISMYVRC--GFVEYGHHVFDR 182 Query: 172 MPQRDLVSWNSMIDGCVKCGNLEFARDLFDRMP--TRDAVSWASMIDGYVKFGR-VDTAR 342 M RD VS+N+MIDG VKCG L+ A LFD MP R+ VSW +M+ GYVK + D A Sbjct: 183 MCLRDSVSYNTMIDGYVKCGMLDVACRLFDFMPIEMRNLVSWNAMLTGYVKLDQGFDVAW 242 Query: 343 FLFNKMAVNELDVVTWNTMI 402 LF+KM E D+V+WN M+ Sbjct: 243 ELFDKMP--ERDLVSWNLML 260 Score = 69.3 bits (168), Expect = 5e-10 Identities = 33/75 (44%), Positives = 50/75 (66%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 D+ N +I V+CG +E+ +FDRM RD+VS+ +MIDGYVK G +D A LF+ M Sbjct: 156 DVFLQNCLISMYVRCGFVEYGHHVFDRMCLRDSVSYNTMIDGYVKCGMLDVACRLFDFMP 215 Query: 364 VNELDVVTWNTMISG 408 + ++V+WN M++G Sbjct: 216 IEMRNLVSWNAMLTG 230 >gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana] Length = 584 Score = 160 bits (405), Expect = 2e-37 Identities = 78/136 (57%), Positives = 104/136 (76%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGFELAWRLFDKMPQ 180 +NSMIDGYVK G+I+ A E+F MP E+KN ISWN MISGY +SEDG +A +LFD+MP+ Sbjct: 162 YNSMIDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYTQSEDGVNVASKLFDEMPE 221 Query: 181 RDLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKM 360 +DL+SWNS+IDG VK +E A+ LFD MP +D V+WA+MIDGY K G V A+ LF++M Sbjct: 222 KDLISWNSLIDGYVKHRRIEDAKSLFDLMPRKDVVTWATMIDGYAKLGFVHQAKKLFDEM 281 Query: 361 AVNELDVVTWNTMISG 408 + DVV +N+M++G Sbjct: 282 P--QRDVVAYNSMMAG 295 Score = 88.6 bits (218), Expect = 8e-16 Identities = 52/120 (43%), Positives = 65/120 (54%), Gaps = 34/120 (28%) Frame = +1 Query: 151 AWRLFDKMPQRDLVSWNSMIDGCVKCGNLEFARD-------------------------- 252 A ++FD+MPQRD VS+NSMIDG VKCG +E AR+ Sbjct: 147 ARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYTQSE 206 Query: 253 --------LFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMAVNELDVVTWNTMISG 408 LFD MP +D +SW S+IDGYVK R++ A+ LF+ M DVVTW TMI G Sbjct: 207 DGVNVASKLFDEMPEKDLISWNSLIDGYVKHRRIEDAKSLFDLMP--RKDVVTWATMIDG 264 Score = 80.9 bits (198), Expect = 2e-13 Identities = 40/75 (53%), Positives = 54/75 (72%) Frame = +1 Query: 184 DLVSWNSMIDGCVKCGNLEFARDLFDRMPTRDAVSWASMIDGYVKFGRVDTARFLFNKMA 363 DL N +I +KCG L FAR +FDRMP RD+VS+ SMIDGYVK G +++AR LF+ M Sbjct: 127 DLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMP 186 Query: 364 VNELDVVTWNTMISG 408 + ++++WN MISG Sbjct: 187 REKKNLISWNCMISG 201 Score = 69.7 bits (169), Expect = 4e-10 Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%) Frame = +1 Query: 1 WNSMIDGYVKRGMIDVASEIFYRMPTEEKNSISWNSMISGYARSEDGF-ELAWRLFDKMP 177 WNS+IDGYVK I+ A +F MP K+ ++W +MI GYA+ GF A +LFD+MP Sbjct: 227 WNSLIDGYVKHRRIEDAKSLFDLMP--RKDVVTWATMIDGYAKL--GFVHQAKKLFDEMP 282 Query: 178 QRDLVSWNSMIDGCVK 225 QRD+V++NSM+ G V+ Sbjct: 283 QRDVVAYNSMMAGYVQ 298