BLASTX nr result
ID: Akebia27_contig00044001
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00044001
(431 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 42 6e-08
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 49 3e-07
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 40 1e-06
ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 48 1e-06
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 42 2e-06
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ... 39 3e-06
emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera] 38 6e-06
ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249... 38 6e-06
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 42.4 bits (98), Expect(2) = 6e-08
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 189 LWIDYLKKKYVKDENWWN--P*KTRGSKIWRTIRSYLQQIISLSKRLIGDGASTSLFLHN 16
LW+ + K +K E++W+ P + GS +W+ + Y + S+ + +GA TS + N
Sbjct: 306 LWVKWSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDN 365
Query: 15 WRG 7
W G
Sbjct: 366 WSG 368
Score = 40.0 bits (92), Expect(2) = 6e-08
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = -2
Query: 295 VCKPKLEGGLGIKTFAEVHKTGLMKTCWRLTN 200
+CKPK EGGLG+++ E + ++K WR+T+
Sbjct: 270 ICKPKQEGGLGLRSLTEANVVSVLKLIWRVTS 301
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 48.9 bits (115), Expect(2) = 3e-07
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -3
Query: 429 SIPVYHILILPIPKYISDSLESCFAKFFWGSAEGKRKNHFVAWHK 295
SIPVY + + PK I D L FA FFW ++ G R H+VAW K
Sbjct: 669 SIPVYLLAAMNPPKSIIDQLHKLFAIFFWSNSSGARNKHWVAWDK 713
Score = 31.2 bits (69), Expect(2) = 3e-07
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 295 VCKPKLEGGLGIKTFAEVHKTGLMKTCWRLTNE 197
+C PK+EGGLG ++ +V K K W +
Sbjct: 714 MCYPKVEGGLGFRSLHDVSKAFFAKLWWNFRTD 746
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 295 VCKPKLEGGLGIKTFAEVHKTGLMKTCWRL 206
+CKPK EGGLG+++ E +K +K WRL
Sbjct: 586 ICKPKKEGGLGLQSLREANKVSSLKLIWRL 615
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 189 LWIDYLKKKYVKDENWWN--P*KTRGSKIWRTIRSYLQQIISLSKRLIGDGASTSLFLHN 16
LW+ + + +K E++W+ T GS IWR + + + S K + +G +TS + N
Sbjct: 622 LWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFDN 681
Query: 15 W 13
W
Sbjct: 682 W 682
>ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
subsp. vesca]
Length = 1164
Score = 47.8 bits (112), Expect(2) = 1e-06
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = -3
Query: 429 SIPVYHILILPIPKYISDSLESCFAKFFWGSAEGKRKNHFVAWHK-CA 289
S+P Y + +L + K+I + + C A+F+WG ++ RK H+VAW K CA
Sbjct: 759 SVPTYVMSVLEVLKHICNEMHRCMAEFWWGDSDRGRKIHWVAWDKMCA 806
Score = 30.4 bits (67), Expect(2) = 1e-06
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 295 VCKPKLEGGLGIKTFAEVHKTGLMKTCWRLTN 200
+C PK EGGLG + ++ L K WR+ N
Sbjct: 804 MCAPKNEGGLGFRNMELFNQALLAKKGWRIIN 835
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = -3
Query: 189 LWIDYLKKKYVKDENWWN--P*KTRGSKIWRTIRSYLQQIISLSKRLIGDGASTSLFLHN 16
LW+ + K +K E++W+ P + GS +W+ + Y + S+ + +GA TS + N
Sbjct: 817 LWVKWSKMNLLKQESFWSLKPNSSLGSWMWKKMLKYRETAKPFSRVEVNNGARTSFWFDN 876
Query: 15 WRG 7
W G
Sbjct: 877 WSG 879
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = -2
Query: 295 VCKPKLEGGLGIKTFAEVHKTGLMKTCWRLTN 200
+CKPK +GGLG+++ E + ++K WR+T+
Sbjct: 782 ICKPK-QGGLGLRSLTEANVVSVLKLIWRVTS 812
>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
hypothetical protein At5g13655 [Arabidopsis thaliana]
Length = 385
Score = 38.5 bits (88), Expect(2) = 3e-06
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 295 VCKPKLEGGLGIKTFAEVHKTGLMKTCWRLTNEK 194
VC PK EGGLG++ E +K ++K WR+ + K
Sbjct: 24 VCTPKSEGGLGLRAVEETNKVCMLKLIWRILSAK 57
Score = 38.1 bits (87), Expect(2) = 3e-06
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -3
Query: 189 LWIDYLKKKYVKDENWWNP*KT--RGSKIWRTIRSYLQQIISLSKRLIGDGASTSLFLHN 16
LW+D++KK ++ + W +T RGS IW+ + Y + K + +G STS + +
Sbjct: 60 LWVDWVKKHLLRGGSLWAVKETSSRGSWIWKKLLKYRDKAKCFHKVDVRNGESTSFWYDS 119
Query: 15 W 13
W
Sbjct: 120 W 120
>emb|CAN81751.1| hypothetical protein VITISV_026939 [Vitis vinifera]
Length = 1653
Score = 38.1 bits (87), Expect(2) = 6e-06
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = -2
Query: 295 VCKPKLEGGLGIKTFAEVHKTGLMKTCWRLTNEKRVVDRLPKKEV 161
VC PK EGGLGI+ ++KT L K WR EK D L KK +
Sbjct: 1432 VCSPKEEGGLGIRKIDLLNKTLLGKWVWRYAYEK---DNLWKKAI 1473
Score = 37.4 bits (85), Expect(2) = 6e-06
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 429 SIPVYHILILPIPKYISDSLESCFAKFFWGSAEGKRKNHFVAW 301
SIP+Y + ++ IPK ++ +E F WG + K H + W
Sbjct: 1387 SIPIYLLSLIRIPKVVAKRIEKIQRDFLWGGGSLEGKGHLINW 1429
>ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249836 [Vitis vinifera]
Length = 1552
Score = 38.1 bits (87), Expect(2) = 6e-06
Identities = 22/45 (48%), Positives = 26/45 (57%)
Frame = -2
Query: 295 VCKPKLEGGLGIKTFAEVHKTGLMKTCWRLTNEKRVVDRLPKKEV 161
VC PK EGGLGI+ ++KT L K WR EK D L KK +
Sbjct: 390 VCSPKEEGGLGIRKIDLLNKTLLGKWVWRYAYEK---DNLWKKAI 431
Score = 37.4 bits (85), Expect(2) = 6e-06
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -3
Query: 429 SIPVYHILILPIPKYISDSLESCFAKFFWGSAEGKRKNHFVAW 301
SIP+Y + ++ IPK ++ +E F WG + K H + W
Sbjct: 345 SIPIYLLSLIRIPKVVAKRIEKIQRDFLWGGGSLEGKGHLINW 387