BLASTX nr result
ID: Akebia27_contig00043815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00043815
(524 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB20252.1| hypothetical protein L484_001445 [Morus notabilis] 110 2e-22
emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera] 105 5e-21
ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241... 104 1e-20
ref|XP_007046104.1| Maternal effect embryo arrest 12, putative [... 93 4e-17
ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associat... 82 6e-14
ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associat... 82 6e-14
ref|XP_003539004.1| PREDICTED: TATA box-binding protein-associat... 80 3e-13
ref|XP_002522432.1| conserved hypothetical protein [Ricinus comm... 79 7e-13
ref|XP_007131757.1| hypothetical protein PHAVU_011G039300g [Phas... 76 4e-12
ref|XP_004291537.1| PREDICTED: TATA box-binding protein-associat... 74 2e-11
ref|XP_006483157.1| PREDICTED: TATA box-binding protein-associat... 74 2e-11
ref|XP_006483156.1| PREDICTED: TATA box-binding protein-associat... 74 2e-11
ref|XP_006438686.1| hypothetical protein CICLE_v10030768mg [Citr... 72 6e-11
ref|XP_006438685.1| hypothetical protein CICLE_v10030768mg [Citr... 72 6e-11
ref|XP_007224504.1| hypothetical protein PRUPE_ppa023055mg, part... 72 1e-10
gb|AAU44444.1| hypothetical protein AT2G02955 [Arabidopsis thali... 71 1e-10
ref|NP_671769.1| TATA box-binding protein-associated factor RNA ... 71 1e-10
ref|XP_006340292.1| PREDICTED: TATA box-binding protein-associat... 70 2e-10
ref|XP_004251201.1| PREDICTED: TATA box-binding protein-associat... 69 5e-10
ref|XP_002875181.1| predicted protein [Arabidopsis lyrata subsp.... 67 2e-09
>gb|EXB20252.1| hypothetical protein L484_001445 [Morus notabilis]
Length = 761
Score = 110 bits (276), Expect = 2e-22
Identities = 74/151 (49%), Positives = 85/151 (56%), Gaps = 15/151 (9%)
Frame = -2
Query: 409 CHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQGA-IYSLGHRR--- 245
CH C N GF D DGFYYC RCGSQAED+ ETGVADEDF DKG GA +YS HRR
Sbjct: 9 CHTCGNAGFADGFDGFYYCLRCGSQAEDIIETGVADEDFADKGGTAGAPLYSATHRRNRP 68
Query: 244 -IVHAIKSEPINLISQSETQDSQFWRTLTQTQTLTGE---------FKTPKEQEEDDVKP 95
AIK+EPI+ + QS T SQFW LT GE KT +E E D V P
Sbjct: 69 VAASAIKAEPISQV-QSATLQSQFWAALTLDDDGEGEGGDRFNRASIKT-EEIEFDGVGP 126
Query: 94 SVPCDFGGGAVRVXXXXXXXXXSEIRARYIL 2
+ P DF G+V S+IR RY++
Sbjct: 127 TGPRDF--GSVGESVPSFEEYYSDIRIRYVM 155
>emb|CAN73288.1| hypothetical protein VITISV_027088 [Vitis vinifera]
Length = 722
Score = 105 bits (263), Expect = 5e-21
Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Frame = -2
Query: 418 NMICHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQGAIYSLGHRRI 242
++ CH C + GF D DGF+YC RCGSQAED+ +TGVA+EDF+ KG+ +GAIYS HRR
Sbjct: 6 BLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSASHRRQ 65
Query: 241 VHAIKSEPINLISQSETQDSQFWRTLTQTQTLTGE-FKTPKEQEEDDVKPSVPCDFGGGA 65
H+I +P +SQS+ SQF LT E +T +E D+V PS P DFG G
Sbjct: 66 RHSIAPKP-EPLSQSQ---SQFLNNLTLDDDYRVENEETREETVADEVGPSGPSDFGLGL 121
Query: 64 VRVXXXXXXXXXSEIRARYIL 2
+++R RY++
Sbjct: 122 DGSDGLSFEDYYTQLRIRYVM 142
>ref|XP_002269865.1| PREDICTED: uncharacterized protein LOC100241425 [Vitis vinifera]
Length = 722
Score = 104 bits (260), Expect = 1e-20
Identities = 62/141 (43%), Positives = 84/141 (59%), Gaps = 2/141 (1%)
Frame = -2
Query: 418 NMICHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQGAIYSLGHRRI 242
++ CH C + GF D DGF+YC RCGSQAED+ +TGVA+EDF+ KG+ +GAIYS HRR
Sbjct: 6 DLTCHVCGSVGFSDGADGFFYCGRCGSQAEDIIDTGVAEEDFVAKGDARGAIYSASHRRQ 65
Query: 241 VHAIKSEPINLISQSETQDSQFWRTLTQTQTLTGE-FKTPKEQEEDDVKPSVPCDFGGGA 65
H+I +P +SQS+ SQF LT E +T +E D+V PS P DFG G
Sbjct: 66 RHSIAPKP-EPLSQSQ---SQFLNNLTLDDDYRVENEETREETVADEVGPSGPSDFGLGL 121
Query: 64 VRVXXXXXXXXXSEIRARYIL 2
+++R RY++
Sbjct: 122 DGSDGLSFEDYYTQLRIRYVM 142
>ref|XP_007046104.1| Maternal effect embryo arrest 12, putative [Theobroma cacao]
gi|508710039|gb|EOY01936.1| Maternal effect embryo
arrest 12, putative [Theobroma cacao]
Length = 734
Score = 92.8 bits (229), Expect = 4e-17
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Frame = -2
Query: 409 CHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQGAIYSLGHRRIVHA 233
C+ C N G D DG+YYC RCGSQA+D+ +TGVADEDFI+KG+ GA+Y H R HA
Sbjct: 10 CNTCGNVGMADGSDGYYYCFRCGSQADDVIDTGVADEDFIEKGSQGGALYLASHTR--HA 67
Query: 232 IKS-EPINLISQSETQDSQFWRTLTQTQTLTGEFKTPKEQEE--DDVKPSVPCDFGGGAV 62
+ P ISQ ++Q QFW LTQ + + + + D V P+ DF GA
Sbjct: 68 RQPVTPSQPISQFDSQSQQFWSHLTQVRRDHDDNQDGMGDDAGLDGVGPTGTSDF--GAY 125
Query: 61 RVXXXXXXXXXSEIRARYIL 2
+ E+R RY++
Sbjct: 126 SMDGYSCEDYYKEVRNRYVM 145
>ref|XP_004166522.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B-like [Cucumis sativus]
Length = 735
Score = 82.4 bits (202), Expect = 6e-14
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Frame = -2
Query: 418 NMICHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFI--DKGNNQGAIYSLGH- 251
N+ C+ C + G D DGF+YC +CGSQA+D+ +TGVA+ED + D G + IYS H
Sbjct: 6 NLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIYSQSHT 65
Query: 250 -RRIVHAIKSEPINLISQSE----TQDSQFWRTLTQTQTLTGEFKTPKEQE----EDDVK 98
RR +K EP +SQS+ T S+FW +L + +G K+ + D V
Sbjct: 66 RRRNPTVLKVEP---LSQSQSLFGTSQSEFWDSLNLMEDPSGNV-GGKDGDIVMLNDGVG 121
Query: 97 PSVPCDFGGGAVRVXXXXXXXXXSEIRARYIL 2
P+ P DFG G V E+R RY++
Sbjct: 122 PTGPEDFGSGDVLSGKPSFEEYADEVRMRYVM 153
>ref|XP_004152882.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B-like [Cucumis sativus]
Length = 735
Score = 82.4 bits (202), Expect = 6e-14
Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 13/152 (8%)
Frame = -2
Query: 418 NMICHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFI--DKGNNQGAIYSLGH- 251
N+ C+ C + G D DGF+YC +CGSQA+D+ +TGVA+ED + D G + IYS H
Sbjct: 6 NLSCYNCGSIGLTDGFDGFFYCLQCGSQADDIIDTGVAEEDLVLRDVGKSGAPIYSQSHT 65
Query: 250 -RRIVHAIKSEPINLISQSE----TQDSQFWRTLTQTQTLTGEFKTPKEQE----EDDVK 98
RR +K EP +SQS+ T S+FW +L + +G K+ + D V
Sbjct: 66 RRRNPTVLKVEP---LSQSQSLFGTSQSEFWDSLNLMEDPSGNV-GGKDGDIVMLNDGVG 121
Query: 97 PSVPCDFGGGAVRVXXXXXXXXXSEIRARYIL 2
P+ P DFG G V E+R RY++
Sbjct: 122 PTGPEDFGSGDVLSGKPSFEEYADEVRMRYVM 153
>ref|XP_003539004.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B-like [Glycine max]
Length = 719
Score = 80.1 bits (196), Expect = 3e-13
Identities = 55/148 (37%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Frame = -2
Query: 415 MICHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQGAIYSLGHRRIV 239
+IC C N G D DGF+YC RCGSQ ED+ +T V D+D N+ A+Y H+R
Sbjct: 7 LICQTCNNVGVGDGSDGFFYCLRCGSQCEDVMDTAVDDDDLF----NKSAVYLPSHQRQR 62
Query: 238 H-AIKSEPINLISQSETQDSQFWRT--LTQTQTLTGEFKTPKEQEE------DDVKPSVP 86
AIK+EPI+ S F R L + K +EE D+ PSVP
Sbjct: 63 SVAIKAEPISQYDSFYDSHSNFIRNLGLEDENPQRNDHVQVKREEEFDAAQFDEASPSVP 122
Query: 85 CDFGGGAVRVXXXXXXXXXSEIRARYIL 2
DFGG V +EIR RY++
Sbjct: 123 ADFGGSQV----ACFEDYHNEIRMRYVM 146
>ref|XP_002522432.1| conserved hypothetical protein [Ricinus communis]
gi|223538317|gb|EEF39924.1| conserved hypothetical
protein [Ricinus communis]
Length = 751
Score = 79.0 bits (193), Expect = 7e-13
Identities = 56/152 (36%), Positives = 76/152 (50%), Gaps = 16/152 (10%)
Frame = -2
Query: 409 CHACENQGFDCIDGFYYCCRCGSQAEDMAETGVADEDFIDK-GNNQGAIYSLGHRRIVHA 233
C C + G + DGFYYC CG+QA+D+ TGVADEDFI+K G GA+YS R
Sbjct: 14 CRRCGHVGLEESDGFYYCQECGAQADDIILTGVADEDFIEKDGEGGGALYSARFTRYSQP 73
Query: 232 IKSEPINLISQS------ETQDSQFWRTLTQTQTLTGEF---KTPKEQEEDD------VK 98
++ N SQ+ E +D F T T TL G + K KE+ DD +
Sbjct: 74 TRTIQTNPSSQAWFRYTQEEEDINF----TTTTTLNGTYSNIKIKKEERFDDDEYLDGLG 129
Query: 97 PSVPCDFGGGAVRVXXXXXXXXXSEIRARYIL 2
P P DFGG ++ +E+R RY++
Sbjct: 130 PVEPEDFGGKSL-----SYEDYYNEVRIRYVM 156
>ref|XP_007131757.1| hypothetical protein PHAVU_011G039300g [Phaseolus vulgaris]
gi|561004757|gb|ESW03751.1| hypothetical protein
PHAVU_011G039300g [Phaseolus vulgaris]
Length = 721
Score = 76.3 bits (186), Expect = 4e-12
Identities = 54/149 (36%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Frame = -2
Query: 418 NMICHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFIDKG-NNQGAIYSLGHRR 245
N+ C C + G D DGF+YC RCGS+ ED+ +TGV +D +KG GA+Y H+R
Sbjct: 6 NLTCQTCNSVGLGDGFDGFFYCLRCGSRYEDVDDTGVDADDLFNKGETGGGAVYIASHQR 65
Query: 244 IVH-AIKSEPINLISQSETQDSQFWRT--LTQTQTLTGEFKTPKEQEED-----DVKPSV 89
AIK+EPI+ S F R L E K +E D + PSV
Sbjct: 66 QRSVAIKAEPISQHDSFYNSQSNFIRNLGLEDDTPQRNELVQVKGEEFDADQFIEESPSV 125
Query: 88 PCDFGGGAVRVXXXXXXXXXSEIRARYIL 2
P DFGG +EIR RY++
Sbjct: 126 PNDFGGSVA-----SFEDYHNEIRMRYVM 149
>ref|XP_004291537.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B-like [Fragaria vesca subsp.
vesca]
Length = 743
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/93 (45%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Frame = -2
Query: 409 CHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFIDK-GNNQGAIYSLGHRRIVH 236
C C N G D DGF+YC +C SQAED +TGVADEDF+D+ GN G +YS H R V+
Sbjct: 9 CQNCGNVGLEDGDDGFFYCTQCNSQAEDFMDTGVADEDFLDQTGNPYGGLYSARHTRRVN 68
Query: 235 A--IKSEPINLISQSETQDSQFWRTLTQTQTLT 143
+ +K+EP +SQ S ++ +Q+Q T
Sbjct: 69 SSVVKAEP---LSQPLDDFSPYYEPFSQSQAKT 98
>ref|XP_006483157.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B-like isoform X2 [Citrus sinensis]
Length = 771
Score = 73.9 bits (180), Expect = 2e-11
Identities = 54/156 (34%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Frame = -2
Query: 409 CHACENQGFDCI-DGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQG-AIYSLGHRRIVH 236
C C+N GF+C DGFYYC C + +++ ETGVADEDF+ G G A+Y H R V
Sbjct: 13 CKKCDNVGFECAYDGFYYCTHCNALDDEIVETGVADEDFMATGAGTGTALYQASHARQV- 71
Query: 235 AIKSEPINLISQSETQDSQFW-------RTLTQTQTLTGEF----------KTPKEQEED 107
S P N +Q S FW T T T T T + K + D
Sbjct: 72 -ANSRPANHFVPL-SQQSSFWSPLLDEPNTTTTTTTTTANYNDLDSIIHRIKREEVSYTD 129
Query: 106 DVKPSVPCDFG-GGAVRVXXXXXXXXXSEIRARYIL 2
V P+ P DFG G V+ E+R +Y++
Sbjct: 130 MVGPTEPQDFGSSGPVKA---DYEDYHFEVRMKYVM 162
>ref|XP_006483156.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B-like isoform X1 [Citrus sinensis]
Length = 772
Score = 73.9 bits (180), Expect = 2e-11
Identities = 54/156 (34%), Positives = 71/156 (45%), Gaps = 20/156 (12%)
Frame = -2
Query: 409 CHACENQGFDCI-DGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQG-AIYSLGHRRIVH 236
C C+N GF+C DGFYYC C + +++ ETGVADEDF+ G G A+Y H R V
Sbjct: 13 CKKCDNVGFECAYDGFYYCTHCNALDDEIVETGVADEDFMATGAGTGTALYQASHARQV- 71
Query: 235 AIKSEPINLISQSETQDSQFW-------RTLTQTQTLTGEF----------KTPKEQEED 107
S P N +Q S FW T T T T T + K + D
Sbjct: 72 -ANSRPANHFVPL-SQQSSFWSPLLDEPNTTTTTTTTTANYNDLDSIIHRIKREEVSYTD 129
Query: 106 DVKPSVPCDFG-GGAVRVXXXXXXXXXSEIRARYIL 2
V P+ P DFG G V+ E+R +Y++
Sbjct: 130 MVGPTEPQDFGSSGPVKA---DYEDYHFEVRMKYVM 162
>ref|XP_006438686.1| hypothetical protein CICLE_v10030768mg [Citrus clementina]
gi|557540882|gb|ESR51926.1| hypothetical protein
CICLE_v10030768mg [Citrus clementina]
Length = 769
Score = 72.4 bits (176), Expect = 6e-11
Identities = 53/153 (34%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Frame = -2
Query: 409 CHACENQGFDCI-DGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQG-AIYSLGHRRIVH 236
C C+N GF+C DGFYYC C + +++ ETGVADEDF+ G G A+Y H R V
Sbjct: 13 CKKCDNVGFECAYDGFYYCTHCNALDDEIVETGVADEDFMATGAGTGTALYQASHARQV- 71
Query: 235 AIKSEPINLISQSETQDSQFWRTL----TQTQTLTGEF----------KTPKEQEEDDVK 98
S P N +Q S FW L T T T + K + D V
Sbjct: 72 -ANSRPANHFVPL-SQQSSFWSPLFDEPNTTTTTTANYNDLDSIIHRIKREEVSYTDMVG 129
Query: 97 PSVPCDFG-GGAVRVXXXXXXXXXSEIRARYIL 2
P+ P DFG G V+ E+R +Y++
Sbjct: 130 PTEPQDFGSSGPVKA---DYEDYHFEVRMKYVM 159
>ref|XP_006438685.1| hypothetical protein CICLE_v10030768mg [Citrus clementina]
gi|557540881|gb|ESR51925.1| hypothetical protein
CICLE_v10030768mg [Citrus clementina]
Length = 768
Score = 72.4 bits (176), Expect = 6e-11
Identities = 53/153 (34%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Frame = -2
Query: 409 CHACENQGFDCI-DGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQG-AIYSLGHRRIVH 236
C C+N GF+C DGFYYC C + +++ ETGVADEDF+ G G A+Y H R V
Sbjct: 13 CKKCDNVGFECAYDGFYYCTHCNALDDEIVETGVADEDFMATGAGTGTALYQASHARQV- 71
Query: 235 AIKSEPINLISQSETQDSQFWRTL----TQTQTLTGEF----------KTPKEQEEDDVK 98
S P N +Q S FW L T T T + K + D V
Sbjct: 72 -ANSRPANHFVPL-SQQSSFWSPLFDEPNTTTTTTANYNDLDSIIHRIKREEVSYTDMVG 129
Query: 97 PSVPCDFG-GGAVRVXXXXXXXXXSEIRARYIL 2
P+ P DFG G V+ E+R +Y++
Sbjct: 130 PTEPQDFGSSGPVKA---DYEDYHFEVRMKYVM 159
>ref|XP_007224504.1| hypothetical protein PRUPE_ppa023055mg, partial [Prunus persica]
gi|462421440|gb|EMJ25703.1| hypothetical protein
PRUPE_ppa023055mg, partial [Prunus persica]
Length = 677
Score = 71.6 bits (174), Expect = 1e-10
Identities = 52/143 (36%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Frame = -2
Query: 427 MAENMICHACENQGF-DCIDGFYYCCRCGSQAEDMAETGVADEDFIDK-GNNQGAIYSLG 254
M+ + IC C N+ D +GF+YC +C SQA+D +TGVADEDF D+ G+ QG +YS
Sbjct: 1 MSNSWICETCGNRELVDGNNGFFYCSQCSSQAQDYKDTGVADEDFYDETGDAQGGLYSAR 60
Query: 253 HRRIVHAIKSEPINLISQSETQDSQFWRTLTQTQTLTGEFKTPKEQEEDDVKPSVPCDFG 74
H R V+ +P L+SQ + L+QT + D V P+ P DFG
Sbjct: 61 HTRRVNISAVKP-ELLSQPLDNN-----PLSQT-----NMENDNAAAADAVGPTEPEDFG 109
Query: 73 GGAVRVXXXXXXXXXSEIRARYI 5
V SE+R RY+
Sbjct: 110 FDTVE-------GYYSEVRLRYV 125
>gb|AAU44444.1| hypothetical protein AT2G02955 [Arabidopsis thaliana]
Length = 293
Score = 71.2 bits (173), Expect = 1e-10
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Frame = -2
Query: 415 MICHACENQGFDCID-GFYYCCRCGSQAEDMAETGVADEDFI-DKGNNQGAIYSLGHRRI 242
MIC CEN FD D G+YYC RCG Q E++ +TGV D D I + G QGA+Y+ HRR
Sbjct: 1 MICTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLIGEGGGTQGALYNPKHRR- 59
Query: 241 VHAIKSEPINLISQSETQD-SQFWRTLTQTQTLTGEFKTPKEQEED-----DVKPSVPCD 80
+ +PI T D S++ + +Q ++ G + P+E + D +P+ P D
Sbjct: 60 ---TEPQPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKEPTEPVD 116
Query: 79 F 77
F
Sbjct: 117 F 117
>ref|NP_671769.1| TATA box-binding protein-associated factor RNA polymerase I subunit
B [Arabidopsis thaliana]
gi|75111159|sp|Q5XVF0.1|MEE12_ARATH RecName: Full=TATA
box-binding protein-associated factor RNA polymerase I
subunit B; AltName: Full=Central cell guidance protein;
AltName: Full=Protein MATERNAL EFFECT EMBRYO ARREST 12;
AltName: Full=TATA box-binding protein-associated factor
1B; Short=TBP-associated factor 1B
gi|52354243|gb|AAU44442.1| hypothetical protein
AT2G02955 [Arabidopsis thaliana]
gi|330250550|gb|AEC05644.1| TATA box-binding
protein-associated factor RNA polymerase I subunit B
[Arabidopsis thaliana]
Length = 666
Score = 71.2 bits (173), Expect = 1e-10
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 8/121 (6%)
Frame = -2
Query: 415 MICHACENQGFDCID-GFYYCCRCGSQAEDMAETGVADEDFI-DKGNNQGAIYSLGHRRI 242
MIC CEN FD D G+YYC RCG Q E++ +TGV D D I + G QGA+Y+ HRR
Sbjct: 1 MICTECENDAFDEEDDGYYYCQRCGVQVENLIQTGVDDGDLIGEGGGTQGALYNPKHRR- 59
Query: 241 VHAIKSEPINLISQSETQD-SQFWRTLTQTQTLTGEFKTPKEQEED-----DVKPSVPCD 80
+ +PI T D S++ + +Q ++ G + P+E + D +P+ P D
Sbjct: 60 ---TEPQPITPSQPRFTDDTSRYSQFKSQFESENGNKELPREVKRAPDSYVDKEPTEPVD 116
Query: 79 F 77
F
Sbjct: 117 F 117
>ref|XP_006340292.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B-like isoform X1 [Solanum
tuberosum] gi|565346503|ref|XP_006340293.1| PREDICTED:
TATA box-binding protein-associated factor RNA
polymerase I subunit B-like isoform X2 [Solanum
tuberosum]
Length = 652
Score = 70.5 bits (171), Expect = 2e-10
Identities = 53/138 (38%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = -2
Query: 409 CHACENQGFDCI-DGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQGAIYSLGHRRIVHA 233
C C N FD DGF+YC RCGSQA D+ +TGV D+D N G +YS RR +
Sbjct: 9 CEVCGNLSFDDGGDGFFYCTRCGSQAVDIMDTGVDDDDLF---NVDGGMYSTSQRR-QYC 64
Query: 232 IKSEPINLISQSETQDSQFWRTLTQTQTLTGEFKTPKEQEEDD-VKPSVPCDFGGGAVRV 56
S+P+ + S+ Q SQ TL F E+ DD V P+VP DFG + +
Sbjct: 65 QVSQPVPI---SQVQLSQHLETLK-------TFDDYDERNGDDGVGPAVPSDFGSSQISL 114
Query: 55 XXXXXXXXXSEIRARYIL 2
SEIR RY++
Sbjct: 115 ---TYTDYYSEIRLRYVM 129
>ref|XP_004251201.1| PREDICTED: TATA box-binding protein-associated factor RNA
polymerase I subunit B-like [Solanum lycopersicum]
Length = 652
Score = 69.3 bits (168), Expect = 5e-10
Identities = 54/139 (38%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Frame = -2
Query: 409 CHACENQGFDCI-DGFYYCCRCGSQAEDMAETGVADEDFIDKGNNQGAIYSLGHRR-IVH 236
C C N FD DGF+YC RCGSQA D+ +TGV D+D N G +YS RR
Sbjct: 9 CEVCGNLSFDDGGDGFFYCTRCGSQAVDIMDTGVDDDDLF---NVDGGMYSTSQRRQYCQ 65
Query: 235 AIKSEPINLISQSETQDSQFWRTLTQTQTLTGEFKTPKEQEEDD-VKPSVPCDFGGGAVR 59
I+ PI S+ Q SQ TL F E DD V P+VP DFG +
Sbjct: 66 VIQPVPI-----SQVQLSQHLETLK-------TFDDYDEHNGDDGVGPAVPSDFGSSQIS 113
Query: 58 VXXXXXXXXXSEIRARYIL 2
+ SEIR RY++
Sbjct: 114 L---TYTDYYSEIRLRYVM 129
>ref|XP_002875181.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321019|gb|EFH51440.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 698
Score = 67.4 bits (163), Expect = 2e-09
Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
Frame = -2
Query: 415 MICHACENQGFDCID-GFYYCCRCGSQAEDMAETGVADEDFI-DKGNNQGAIYSLGHRRI 242
M+C C+N FD D G++YC RCG QAED+ +TGV D D I D G GAIY +RR
Sbjct: 1 MLCRECDNDAFDEEDDGYFYCKRCGVQAEDLIQTGVDDGDLIGDGGGTHGAIYDPRYRRT 60
Query: 241 VHAIKSEPINLISQSETQD--------SQFWRTLTQTQTLTGEFKTPKEQEEDDVKPSVP 86
+ ++PI T D SQ + + + L E K E + +P+ P
Sbjct: 61 I----TQPITPSQPRYTDDTIRYTHFKSQLESEIEKKKDLPREVKREPEIYLEK-EPTEP 115
Query: 85 CDFG 74
DFG
Sbjct: 116 VDFG 119