BLASTX nr result

ID: Akebia27_contig00042773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00042773
         (401 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD03734.1| light harvesting complex I protein precursor [Chl...   112   7e-23
emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydom...   112   7e-23
ref|XP_002958611.1| light-harvesting protein of photosystem I [V...   112   7e-23
ref|XP_005645058.1| light harvesting complex protein I-20 [Cocco...   111   9e-23
gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein ...   109   3e-22
ref|XP_005645059.1| light harvesting complex a protein [Coccomyx...   105   5e-21
ref|XP_005849804.1| hypothetical protein CHLNCDRAFT_59626 [Chlor...   105   6e-21
ref|XP_005847168.1| hypothetical protein CHLNCDRAFT_35848 [Chlor...   105   6e-21
ref|XP_002945875.1| light harvesting complex a protein [Volvox c...   102   7e-20
gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b pr...   101   9e-20
ref|XP_001696202.1| light-harvesting protein of photosystem I [C...    99   8e-19
gb|ABD37906.1| light-harvesting chlorophyll-a/b binding protein ...    97   2e-18
ref|XP_005649543.1| light-harvesting chlorophyll a/b-binding pro...    96   5e-18
ref|XP_005645057.1| light-harvesting complex I protein [Coccomyx...    96   7e-18
gb|ABD37882.1| light-harvesting chlorophyll-a/b binding protein ...    94   2e-17
ref|XP_002955817.1| hypothetical protein VOLCADRAFT_106964 [Volv...    94   3e-17
ref|XP_002957416.1| light-harvesting protein of photosystem I [V...    94   3e-17
gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas...    93   3e-17
gb|AAG28464.1|AF195794_1 chlorophyll A-B binding protein of LHCI...    92   7e-17
gb|ABA01130.1| chloroplast light harvesting complex I protein [C...    92   7e-17

>gb|AAD03734.1| light harvesting complex I protein precursor [Chlamydomonas
           reinhardtii] gi|40714519|dbj|BAD06923.1|
           light-harvesting chlorophyll-a/b protein of photosystem
           I [Chlamydomonas reinhardtii]
          Length = 228

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/73 (69%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGGAFDPLG++K + +  +LK+KE+KNGRLAM+AFLGF+AQ+ ATGKGPI  LG+HLANP
Sbjct: 154 PGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANP 213

Query: 177 WANNFATNGVSIP 215
           W  NFATNG+S+P
Sbjct: 214 WGANFATNGISVP 226


>emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydomonas reinhardtii]
          Length = 224

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/73 (69%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGGAFDPLG++K + +  +LK+KE+KNGRLAM+AFLGF+AQ+ ATGKGPI  LG+HLANP
Sbjct: 150 PGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANP 209

Query: 177 WANNFATNGVSIP 215
           W  NFATNG+S+P
Sbjct: 210 WGANFATNGISVP 222


>ref|XP_002958611.1| light-harvesting protein of photosystem I [Volvox carteri f.
           nagariensis] gi|300256072|gb|EFJ40348.1|
           light-harvesting protein of photosystem I [Volvox
           carteri f. nagariensis]
          Length = 228

 Score =  112 bits (279), Expect = 7e-23
 Identities = 52/73 (71%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGGAFDPLG++K + +  +LK+KE+KNGRLAM+AFLGFIAQ+ ATGKGP+  LG+HLANP
Sbjct: 154 PGGAFDPLGFAKDSSKAGELKLKEIKNGRLAMVAFLGFIAQHAATGKGPLAALGEHLANP 213

Query: 177 WANNFATNGVSIP 215
           W  NFATNGVS+P
Sbjct: 214 WGANFATNGVSVP 226


>ref|XP_005645058.1| light harvesting complex protein I-20 [Coccomyxa subellipsoidea
           C-169] gi|384247026|gb|EIE20514.1| light harvesting
           complex protein I-20 [Coccomyxa subellipsoidea C-169]
          Length = 229

 Score =  111 bits (278), Expect = 9e-23
 Identities = 56/75 (74%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGN--LEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGGAFDPLG+SK +  LE+ K+KELKNGRLAMLAF+GFIAQ+ ATGKGP+E L  HLA+P
Sbjct: 154 PGGAFDPLGFSKDSKVLEENKLKELKNGRLAMLAFVGFIAQHAATGKGPLEALKLHLADP 213

Query: 177 WANNFATNGVSIPGL 221
           W  NFATNGVSIP L
Sbjct: 214 WGANFATNGVSIPYL 228


>gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein Lhca6
           [Chlamydomonas incerta]
          Length = 192

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/73 (69%), Positives = 63/73 (86%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGGAFDPLG++K   +  +LK+KE+KNGRLAM+AFLGF+AQ+ ATGKGPI  LG+HL+NP
Sbjct: 118 PGGAFDPLGFAKDASKSGELKLKEVKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLSNP 177

Query: 177 WANNFATNGVSIP 215
           W  NFATNG+SIP
Sbjct: 178 WGANFATNGISIP 190


>ref|XP_005645059.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
           gi|384247027|gb|EIE20515.1| light harvesting complex a
           protein [Coccomyxa subellipsoidea C-169]
          Length = 255

 Score =  105 bits (263), Expect = 5e-21
 Identities = 51/72 (70%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
 Frame = +3

Query: 3   PGGAFDPLGWSKG-NLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPW 179
           PGG FDPLG SKG   E +K++E+KNGRLAMLAF+GF +QY ATGKGPIENL  HL+NP 
Sbjct: 172 PGGVFDPLGLSKGPGYEAMKLREIKNGRLAMLAFIGFASQYLATGKGPIENLLDHLSNPL 231

Query: 180 ANNFATNGVSIP 215
           ANNF TNG S+P
Sbjct: 232 ANNFTTNGTSLP 243


>ref|XP_005849804.1| hypothetical protein CHLNCDRAFT_59626 [Chlorella variabilis]
           gi|307109464|gb|EFN57702.1| hypothetical protein
           CHLNCDRAFT_59626 [Chlorella variabilis]
          Length = 249

 Score =  105 bits (262), Expect = 6e-21
 Identities = 47/74 (63%), Positives = 62/74 (83%), Gaps = 3/74 (4%)
 Frame = +3

Query: 3   PGGAFDPLGW---SKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLAN 173
           PGG F+PLG    SK +++D K +E++NGRLAM+AFLGF+AQ+ ATGKGP++NL  HLA+
Sbjct: 172 PGGPFNPLGLGNSSKESMDDFKWREIRNGRLAMMAFLGFLAQHAATGKGPLDNLADHLAD 231

Query: 174 PWANNFATNGVSIP 215
           PWANNF +NGVS+P
Sbjct: 232 PWANNFCSNGVSLP 245


>ref|XP_005847168.1| hypothetical protein CHLNCDRAFT_35848 [Chlorella variabilis]
           gi|307106821|gb|EFN55066.1| hypothetical protein
           CHLNCDRAFT_35848 [Chlorella variabilis]
          Length = 219

 Score =  105 bits (262), Expect = 6e-21
 Identities = 48/71 (67%), Positives = 57/71 (80%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPWA 182
           PGG FDP G SKGN ++L+ KE+KNGRLAM+A LGF+AQ+ ATG  P+E LG HLANP  
Sbjct: 147 PGGPFDPAGMSKGNQDELRTKEIKNGRLAMIACLGFVAQHAATGASPLEALGAHLANPMV 206

Query: 183 NNFATNGVSIP 215
            NFATNGVS+P
Sbjct: 207 ANFATNGVSLP 217


>ref|XP_002945875.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
           gi|5902596|gb|AAD55568.1|AF110786_1 light harvesting
           complex a protein [Volvox carteri f. nagariensis]
           gi|300268690|gb|EFJ52870.1| light harvesting complex a
           protein [Volvox carteri f. nagariensis]
          Length = 243

 Score =  102 bits (253), Expect = 7e-20
 Identities = 51/75 (68%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSKG--NLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGG FDPLG SK    L D K+KE+KNGRLAM+AFLGF AQ  ATGKGPI+NL  HLA+P
Sbjct: 169 PGGIFDPLGLSKDADKLADWKLKEIKNGRLAMVAFLGFTAQKFATGKGPIDNLAAHLADP 228

Query: 177 WANNFATNGVSIPGL 221
           W  N+A+NGVS+P L
Sbjct: 229 WHVNYASNGVSVPFL 243


>gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b protein 2
           [Dunaliella salina]
          Length = 228

 Score =  101 bits (252), Expect = 9e-20
 Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSKG--NLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGGAFDPLG+SK   + ED K+KELKNGRLAM+A LGF  Q+ ATGK  +E LG HL++P
Sbjct: 154 PGGAFDPLGFSKDPKSFEDKKLKELKNGRLAMVACLGFAGQHAATGKPILEALGDHLSSP 213

Query: 177 WANNFATNGVSIPGL 221
           + NNFATNGVS+PG+
Sbjct: 214 FFNNFATNGVSVPGV 228


>ref|XP_001696202.1| light-harvesting protein of photosystem I [Chlamydomonas
           reinhardtii] gi|40714515|dbj|BAD06921.1|
           light-harvesting chlorophyll-a/b protein of photosystem
           I [Chlamydomonas reinhardtii]
           gi|158282427|gb|EDP08179.1| light-harvesting protein of
           photosystem I [Chlamydomonas reinhardtii]
          Length = 243

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSK--GNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGG FDPLG SK      D K+KE+KNGRLAMLAFLGF+AQ  ATG GP++NL  HL +P
Sbjct: 169 PGGPFDPLGLSKEADKWADWKLKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLAAHLKDP 228

Query: 177 WANNFATNGVSIPGL 221
           W  N+ATNGVS+P L
Sbjct: 229 WHVNYATNGVSLPFL 243


>gb|ABD37906.1| light-harvesting chlorophyll-a/b binding protein Lhca4
           [Chlamydomonas incerta]
          Length = 237

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
 Frame = +3

Query: 3   PGGAFDPLGWSK--GNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGG FDPLG SK      D K+KE+KNGRLAMLAFLGF+AQ  ATG GP++NL  HL +P
Sbjct: 163 PGGPFDPLGLSKEADKWADWKLKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLVAHLKDP 222

Query: 177 WANNFATNGVSIPGL 221
           W  N+ATNGVS+P L
Sbjct: 223 WHVNYATNGVSLPFL 237


>ref|XP_005649543.1| light-harvesting chlorophyll a/b-binding protein Lhca3 [Coccomyxa
           subellipsoidea C-169] gi|384251522|gb|EIE24999.1|
           light-harvesting chlorophyll a/b-binding protein Lhca3
           [Coccomyxa subellipsoidea C-169]
          Length = 274

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 42/66 (63%), Positives = 53/66 (80%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPWA 182
           PGG FDP G+SKGN ++++ KE+KNGRLAM+AF+GFI Q  ATG+GP+ NLG HLANP+ 
Sbjct: 182 PGGIFDPFGFSKGNFKEVQTKEIKNGRLAMVAFVGFIIQAQATGQGPLANLGAHLANPFG 241

Query: 183 NNFATN 200
           NN   N
Sbjct: 242 NNITKN 247


>ref|XP_005645057.1| light-harvesting complex I protein [Coccomyxa subellipsoidea C-169]
           gi|384247025|gb|EIE20513.1| light-harvesting complex I
           protein [Coccomyxa subellipsoidea C-169]
          Length = 259

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
 Frame = +3

Query: 3   PGGA-FDPLGWSKGN---LEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLA 170
           PGG  FDP G S+G+   L+  +  E+KNGRLAM+AFLGFIAQ+ ATGKGPI+NL  HLA
Sbjct: 182 PGGKLFDPFGLSRGSEGQLQKYQENEIKNGRLAMVAFLGFIAQHAATGKGPIDNLADHLA 241

Query: 171 NPWANNFATNGVSIP 215
           NP A  FATNGVS+P
Sbjct: 242 NPTAVTFATNGVSLP 256


>gb|ABD37882.1| light-harvesting chlorophyll-a/b binding protein Lhca4.2
           [Mesostigma viride] gi|145079732|tpg|DAA05926.1|
           TPA_inf: chloroplast light-harvesting complex I protein
           precursor Lhca5 [Mesostigma viride]
          Length = 246

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 43/62 (69%), Positives = 49/62 (79%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPWA 182
           PGG FDPLG+SKGNLE+ K KEL+NGRLAM+A LG   QY ATGK P+ NL  HLA+PW 
Sbjct: 178 PGGMFDPLGFSKGNLEESKWKELRNGRLAMVASLGMFIQYDATGKSPLTNLADHLADPWH 237

Query: 183 NN 188
           NN
Sbjct: 238 NN 239


>ref|XP_002955817.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
           nagariensis] gi|300258785|gb|EFJ43018.1| hypothetical
           protein VOLCADRAFT_106964 [Volvox carteri f.
           nagariensis]
          Length = 257

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 41/66 (62%), Positives = 53/66 (80%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPWA 182
           PGG FDPLG+SKGNL++L+ KE+KNGRLAM+A++GF+ Q  ATGKGP+  L  HL+NP+ 
Sbjct: 165 PGGIFDPLGFSKGNLKELQTKEIKNGRLAMVAYMGFVLQAQATGKGPLAALSAHLSNPFG 224

Query: 183 NNFATN 200
           NN   N
Sbjct: 225 NNILKN 230


>ref|XP_002957416.1| light-harvesting protein of photosystem I [Volvox carteri f.
           nagariensis] gi|300257220|gb|EFJ41471.1|
           light-harvesting protein of photosystem I [Volvox
           carteri f. nagariensis]
          Length = 241

 Score = 93.6 bits (231), Expect = 3e-17
 Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
 Frame = +3

Query: 3   PGGAF-DPLGWSKGNLE---DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLA 170
           PGG F DP+G S+G+ +   + K KE+KNGRLAM+A LGF AQY ATGKGP++NL  HLA
Sbjct: 165 PGGRFFDPMGLSRGDADKYKEYKQKEIKNGRLAMIACLGFAAQYAATGKGPLDNLADHLA 224

Query: 171 NPWANNFATNGVSIP 215
           +P   NFATNGVSIP
Sbjct: 225 DPNHVNFATNGVSIP 239


>gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas reinhardtii]
          Length = 241

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
 Frame = +3

Query: 3   PGGAF-DPLGWSKGNL---EDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLA 170
           PGG F DP+G S+G+    ++ K KE+KNGRLAM+A LGF AQY ATGKGP++NL  HLA
Sbjct: 165 PGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGKGPLDNLADHLA 224

Query: 171 NPWANNFATNGVSIP 215
           +P   NFATNGVSIP
Sbjct: 225 DPNHVNFATNGVSIP 239


>gb|AAG28464.1|AF195794_1 chlorophyll A-B binding protein of LHCI [Chlamydomonas reinhardtii]
          Length = 239

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 42/62 (67%), Positives = 54/62 (87%), Gaps = 2/62 (3%)
 Frame = +3

Query: 3   PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
           PGGAFDPLG++K + +  +LK+KE+KNGRLAM+AFLGF+AQ+ ATGK P+  LG+HLANP
Sbjct: 154 PGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKAPLAALGEHLANP 213

Query: 177 WA 182
           WA
Sbjct: 214 WA 215


>gb|ABA01130.1| chloroplast light harvesting complex I protein [Chlamydomonas
           incerta]
          Length = 241

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
 Frame = +3

Query: 3   PGGAF-DPLGWSKGNLE---DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLA 170
           PGG F DP+G S+G+     + K KE+KNGRLAM+A LGF AQY ATGKGP++NL  HLA
Sbjct: 165 PGGRFFDPMGLSRGDAAKYAEYKQKEVKNGRLAMIACLGFAAQYAATGKGPLDNLSDHLA 224

Query: 171 NPWANNFATNGVSIP 215
           +P   NFATNGVSIP
Sbjct: 225 DPNHINFATNGVSIP 239


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