BLASTX nr result
ID: Akebia27_contig00042773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00042773
(401 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD03734.1| light harvesting complex I protein precursor [Chl... 112 7e-23
emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydom... 112 7e-23
ref|XP_002958611.1| light-harvesting protein of photosystem I [V... 112 7e-23
ref|XP_005645058.1| light harvesting complex protein I-20 [Cocco... 111 9e-23
gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein ... 109 3e-22
ref|XP_005645059.1| light harvesting complex a protein [Coccomyx... 105 5e-21
ref|XP_005849804.1| hypothetical protein CHLNCDRAFT_59626 [Chlor... 105 6e-21
ref|XP_005847168.1| hypothetical protein CHLNCDRAFT_35848 [Chlor... 105 6e-21
ref|XP_002945875.1| light harvesting complex a protein [Volvox c... 102 7e-20
gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b pr... 101 9e-20
ref|XP_001696202.1| light-harvesting protein of photosystem I [C... 99 8e-19
gb|ABD37906.1| light-harvesting chlorophyll-a/b binding protein ... 97 2e-18
ref|XP_005649543.1| light-harvesting chlorophyll a/b-binding pro... 96 5e-18
ref|XP_005645057.1| light-harvesting complex I protein [Coccomyx... 96 7e-18
gb|ABD37882.1| light-harvesting chlorophyll-a/b binding protein ... 94 2e-17
ref|XP_002955817.1| hypothetical protein VOLCADRAFT_106964 [Volv... 94 3e-17
ref|XP_002957416.1| light-harvesting protein of photosystem I [V... 94 3e-17
gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas... 93 3e-17
gb|AAG28464.1|AF195794_1 chlorophyll A-B binding protein of LHCI... 92 7e-17
gb|ABA01130.1| chloroplast light harvesting complex I protein [C... 92 7e-17
>gb|AAD03734.1| light harvesting complex I protein precursor [Chlamydomonas
reinhardtii] gi|40714519|dbj|BAD06923.1|
light-harvesting chlorophyll-a/b protein of photosystem
I [Chlamydomonas reinhardtii]
Length = 228
Score = 112 bits (279), Expect = 7e-23
Identities = 51/73 (69%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGGAFDPLG++K + + +LK+KE+KNGRLAM+AFLGF+AQ+ ATGKGPI LG+HLANP
Sbjct: 154 PGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANP 213
Query: 177 WANNFATNGVSIP 215
W NFATNG+S+P
Sbjct: 214 WGANFATNGISVP 226
>emb|CAA46235.1| light harvesting complex protein I-20 [Chlamydomonas reinhardtii]
Length = 224
Score = 112 bits (279), Expect = 7e-23
Identities = 51/73 (69%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGGAFDPLG++K + + +LK+KE+KNGRLAM+AFLGF+AQ+ ATGKGPI LG+HLANP
Sbjct: 150 PGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLANP 209
Query: 177 WANNFATNGVSIP 215
W NFATNG+S+P
Sbjct: 210 WGANFATNGISVP 222
>ref|XP_002958611.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis] gi|300256072|gb|EFJ40348.1|
light-harvesting protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 228
Score = 112 bits (279), Expect = 7e-23
Identities = 52/73 (71%), Positives = 64/73 (87%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGGAFDPLG++K + + +LK+KE+KNGRLAM+AFLGFIAQ+ ATGKGP+ LG+HLANP
Sbjct: 154 PGGAFDPLGFAKDSSKAGELKLKEIKNGRLAMVAFLGFIAQHAATGKGPLAALGEHLANP 213
Query: 177 WANNFATNGVSIP 215
W NFATNGVS+P
Sbjct: 214 WGANFATNGVSVP 226
>ref|XP_005645058.1| light harvesting complex protein I-20 [Coccomyxa subellipsoidea
C-169] gi|384247026|gb|EIE20514.1| light harvesting
complex protein I-20 [Coccomyxa subellipsoidea C-169]
Length = 229
Score = 111 bits (278), Expect = 9e-23
Identities = 56/75 (74%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSKGN--LEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGGAFDPLG+SK + LE+ K+KELKNGRLAMLAF+GFIAQ+ ATGKGP+E L HLA+P
Sbjct: 154 PGGAFDPLGFSKDSKVLEENKLKELKNGRLAMLAFVGFIAQHAATGKGPLEALKLHLADP 213
Query: 177 WANNFATNGVSIPGL 221
W NFATNGVSIP L
Sbjct: 214 WGANFATNGVSIPYL 228
>gb|ABD37908.1| light-harvesting chlorophyll-a/b binding protein Lhca6
[Chlamydomonas incerta]
Length = 192
Score = 109 bits (273), Expect = 3e-22
Identities = 51/73 (69%), Positives = 63/73 (86%), Gaps = 2/73 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGGAFDPLG++K + +LK+KE+KNGRLAM+AFLGF+AQ+ ATGKGPI LG+HL+NP
Sbjct: 118 PGGAFDPLGFAKDASKSGELKLKEVKNGRLAMVAFLGFVAQHAATGKGPIAALGEHLSNP 177
Query: 177 WANNFATNGVSIP 215
W NFATNG+SIP
Sbjct: 178 WGANFATNGISIP 190
>ref|XP_005645059.1| light harvesting complex a protein [Coccomyxa subellipsoidea C-169]
gi|384247027|gb|EIE20515.1| light harvesting complex a
protein [Coccomyxa subellipsoidea C-169]
Length = 255
Score = 105 bits (263), Expect = 5e-21
Identities = 51/72 (70%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Frame = +3
Query: 3 PGGAFDPLGWSKG-NLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPW 179
PGG FDPLG SKG E +K++E+KNGRLAMLAF+GF +QY ATGKGPIENL HL+NP
Sbjct: 172 PGGVFDPLGLSKGPGYEAMKLREIKNGRLAMLAFIGFASQYLATGKGPIENLLDHLSNPL 231
Query: 180 ANNFATNGVSIP 215
ANNF TNG S+P
Sbjct: 232 ANNFTTNGTSLP 243
>ref|XP_005849804.1| hypothetical protein CHLNCDRAFT_59626 [Chlorella variabilis]
gi|307109464|gb|EFN57702.1| hypothetical protein
CHLNCDRAFT_59626 [Chlorella variabilis]
Length = 249
Score = 105 bits (262), Expect = 6e-21
Identities = 47/74 (63%), Positives = 62/74 (83%), Gaps = 3/74 (4%)
Frame = +3
Query: 3 PGGAFDPLGW---SKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLAN 173
PGG F+PLG SK +++D K +E++NGRLAM+AFLGF+AQ+ ATGKGP++NL HLA+
Sbjct: 172 PGGPFNPLGLGNSSKESMDDFKWREIRNGRLAMMAFLGFLAQHAATGKGPLDNLADHLAD 231
Query: 174 PWANNFATNGVSIP 215
PWANNF +NGVS+P
Sbjct: 232 PWANNFCSNGVSLP 245
>ref|XP_005847168.1| hypothetical protein CHLNCDRAFT_35848 [Chlorella variabilis]
gi|307106821|gb|EFN55066.1| hypothetical protein
CHLNCDRAFT_35848 [Chlorella variabilis]
Length = 219
Score = 105 bits (262), Expect = 6e-21
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPWA 182
PGG FDP G SKGN ++L+ KE+KNGRLAM+A LGF+AQ+ ATG P+E LG HLANP
Sbjct: 147 PGGPFDPAGMSKGNQDELRTKEIKNGRLAMIACLGFVAQHAATGASPLEALGAHLANPMV 206
Query: 183 NNFATNGVSIP 215
NFATNGVS+P
Sbjct: 207 ANFATNGVSLP 217
>ref|XP_002945875.1| light harvesting complex a protein [Volvox carteri f. nagariensis]
gi|5902596|gb|AAD55568.1|AF110786_1 light harvesting
complex a protein [Volvox carteri f. nagariensis]
gi|300268690|gb|EFJ52870.1| light harvesting complex a
protein [Volvox carteri f. nagariensis]
Length = 243
Score = 102 bits (253), Expect = 7e-20
Identities = 51/75 (68%), Positives = 59/75 (78%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSKG--NLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGG FDPLG SK L D K+KE+KNGRLAM+AFLGF AQ ATGKGPI+NL HLA+P
Sbjct: 169 PGGIFDPLGLSKDADKLADWKLKEIKNGRLAMVAFLGFTAQKFATGKGPIDNLAAHLADP 228
Query: 177 WANNFATNGVSIPGL 221
W N+A+NGVS+P L
Sbjct: 229 WHVNYASNGVSVPFL 243
>gb|ACN94453.1| photosystem I light-harvesting cholrophyll-a/b protein 2
[Dunaliella salina]
Length = 228
Score = 101 bits (252), Expect = 9e-20
Identities = 50/75 (66%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSKG--NLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGGAFDPLG+SK + ED K+KELKNGRLAM+A LGF Q+ ATGK +E LG HL++P
Sbjct: 154 PGGAFDPLGFSKDPKSFEDKKLKELKNGRLAMVACLGFAGQHAATGKPILEALGDHLSSP 213
Query: 177 WANNFATNGVSIPGL 221
+ NNFATNGVS+PG+
Sbjct: 214 FFNNFATNGVSVPGV 228
>ref|XP_001696202.1| light-harvesting protein of photosystem I [Chlamydomonas
reinhardtii] gi|40714515|dbj|BAD06921.1|
light-harvesting chlorophyll-a/b protein of photosystem
I [Chlamydomonas reinhardtii]
gi|158282427|gb|EDP08179.1| light-harvesting protein of
photosystem I [Chlamydomonas reinhardtii]
Length = 243
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSK--GNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGG FDPLG SK D K+KE+KNGRLAMLAFLGF+AQ ATG GP++NL HL +P
Sbjct: 169 PGGPFDPLGLSKEADKWADWKLKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLAAHLKDP 228
Query: 177 WANNFATNGVSIPGL 221
W N+ATNGVS+P L
Sbjct: 229 WHVNYATNGVSLPFL 243
>gb|ABD37906.1| light-harvesting chlorophyll-a/b binding protein Lhca4
[Chlamydomonas incerta]
Length = 237
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 PGGAFDPLGWSK--GNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGG FDPLG SK D K+KE+KNGRLAMLAFLGF+AQ ATG GP++NL HL +P
Sbjct: 163 PGGPFDPLGLSKEADKWADWKLKEVKNGRLAMLAFLGFVAQKYATGAGPVDNLVAHLKDP 222
Query: 177 WANNFATNGVSIPGL 221
W N+ATNGVS+P L
Sbjct: 223 WHVNYATNGVSLPFL 237
>ref|XP_005649543.1| light-harvesting chlorophyll a/b-binding protein Lhca3 [Coccomyxa
subellipsoidea C-169] gi|384251522|gb|EIE24999.1|
light-harvesting chlorophyll a/b-binding protein Lhca3
[Coccomyxa subellipsoidea C-169]
Length = 274
Score = 95.9 bits (237), Expect = 5e-18
Identities = 42/66 (63%), Positives = 53/66 (80%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPWA 182
PGG FDP G+SKGN ++++ KE+KNGRLAM+AF+GFI Q ATG+GP+ NLG HLANP+
Sbjct: 182 PGGIFDPFGFSKGNFKEVQTKEIKNGRLAMVAFVGFIIQAQATGQGPLANLGAHLANPFG 241
Query: 183 NNFATN 200
NN N
Sbjct: 242 NNITKN 247
>ref|XP_005645057.1| light-harvesting complex I protein [Coccomyxa subellipsoidea C-169]
gi|384247025|gb|EIE20513.1| light-harvesting complex I
protein [Coccomyxa subellipsoidea C-169]
Length = 259
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/75 (65%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Frame = +3
Query: 3 PGGA-FDPLGWSKGN---LEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLA 170
PGG FDP G S+G+ L+ + E+KNGRLAM+AFLGFIAQ+ ATGKGPI+NL HLA
Sbjct: 182 PGGKLFDPFGLSRGSEGQLQKYQENEIKNGRLAMVAFLGFIAQHAATGKGPIDNLADHLA 241
Query: 171 NPWANNFATNGVSIP 215
NP A FATNGVS+P
Sbjct: 242 NPTAVTFATNGVSLP 256
>gb|ABD37882.1| light-harvesting chlorophyll-a/b binding protein Lhca4.2
[Mesostigma viride] gi|145079732|tpg|DAA05926.1|
TPA_inf: chloroplast light-harvesting complex I protein
precursor Lhca5 [Mesostigma viride]
Length = 246
Score = 94.0 bits (232), Expect = 2e-17
Identities = 43/62 (69%), Positives = 49/62 (79%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPWA 182
PGG FDPLG+SKGNLE+ K KEL+NGRLAM+A LG QY ATGK P+ NL HLA+PW
Sbjct: 178 PGGMFDPLGFSKGNLEESKWKELRNGRLAMVASLGMFIQYDATGKSPLTNLADHLADPWH 237
Query: 183 NN 188
NN
Sbjct: 238 NN 239
>ref|XP_002955817.1| hypothetical protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis] gi|300258785|gb|EFJ43018.1| hypothetical
protein VOLCADRAFT_106964 [Volvox carteri f.
nagariensis]
Length = 257
Score = 93.6 bits (231), Expect = 3e-17
Identities = 41/66 (62%), Positives = 53/66 (80%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLEDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANPWA 182
PGG FDPLG+SKGNL++L+ KE+KNGRLAM+A++GF+ Q ATGKGP+ L HL+NP+
Sbjct: 165 PGGIFDPLGFSKGNLKELQTKEIKNGRLAMVAYMGFVLQAQATGKGPLAALSAHLSNPFG 224
Query: 183 NNFATN 200
NN N
Sbjct: 225 NNILKN 230
>ref|XP_002957416.1| light-harvesting protein of photosystem I [Volvox carteri f.
nagariensis] gi|300257220|gb|EFJ41471.1|
light-harvesting protein of photosystem I [Volvox
carteri f. nagariensis]
Length = 241
Score = 93.6 bits (231), Expect = 3e-17
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Frame = +3
Query: 3 PGGAF-DPLGWSKGNLE---DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLA 170
PGG F DP+G S+G+ + + K KE+KNGRLAM+A LGF AQY ATGKGP++NL HLA
Sbjct: 165 PGGRFFDPMGLSRGDADKYKEYKQKEIKNGRLAMIACLGFAAQYAATGKGPLDNLADHLA 224
Query: 171 NPWANNFATNGVSIP 215
+P NFATNGVSIP
Sbjct: 225 DPNHVNFATNGVSIP 239
>gb|AAO16495.1| light-harvesting complex I protein [Chlamydomonas reinhardtii]
Length = 241
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 4/75 (5%)
Frame = +3
Query: 3 PGGAF-DPLGWSKGNL---EDLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLA 170
PGG F DP+G S+G+ ++ K KE+KNGRLAM+A LGF AQY ATGKGP++NL HLA
Sbjct: 165 PGGRFFDPMGLSRGDAAKYQEYKQKEVKNGRLAMIACLGFAAQYAATGKGPLDNLADHLA 224
Query: 171 NPWANNFATNGVSIP 215
+P NFATNGVSIP
Sbjct: 225 DPNHVNFATNGVSIP 239
>gb|AAG28464.1|AF195794_1 chlorophyll A-B binding protein of LHCI [Chlamydomonas reinhardtii]
Length = 239
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/62 (67%), Positives = 54/62 (87%), Gaps = 2/62 (3%)
Frame = +3
Query: 3 PGGAFDPLGWSKGNLE--DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLANP 176
PGGAFDPLG++K + + +LK+KE+KNGRLAM+AFLGF+AQ+ ATGK P+ LG+HLANP
Sbjct: 154 PGGAFDPLGFAKDSSKSGELKLKEIKNGRLAMVAFLGFVAQHAATGKAPLAALGEHLANP 213
Query: 177 WA 182
WA
Sbjct: 214 WA 215
>gb|ABA01130.1| chloroplast light harvesting complex I protein [Chlamydomonas
incerta]
Length = 241
Score = 92.0 bits (227), Expect = 7e-17
Identities = 48/75 (64%), Positives = 57/75 (76%), Gaps = 4/75 (5%)
Frame = +3
Query: 3 PGGAF-DPLGWSKGNLE---DLKVKELKNGRLAMLAFLGFIAQYGATGKGPIENLGQHLA 170
PGG F DP+G S+G+ + K KE+KNGRLAM+A LGF AQY ATGKGP++NL HLA
Sbjct: 165 PGGRFFDPMGLSRGDAAKYAEYKQKEVKNGRLAMIACLGFAAQYAATGKGPLDNLSDHLA 224
Query: 171 NPWANNFATNGVSIP 215
+P NFATNGVSIP
Sbjct: 225 DPNHINFATNGVSIP 239