BLASTX nr result

ID: Akebia27_contig00042754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00042754
         (423 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006418543.1| hypothetical protein EUTSA_v10002423mg [Eutr...    53   3e-08
ref|XP_006854337.1| hypothetical protein AMTR_s00039p00132380 [A...    55   7e-08
ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containi...    54   4e-07
ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containi...    52   8e-07
ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containi...    54   8e-07
ref|NP_178563.2| pentatricopeptide repeat-containing protein [Ar...    49   1e-06
ref|XP_006826843.1| hypothetical protein AMTR_s00010p00101850 [A...    50   1e-06
ref|XP_006848936.1| hypothetical protein AMTR_s00166p00033330 [A...    57   2e-06
ref|XP_007225449.1| hypothetical protein PRUPE_ppa000328mg [Prun...    49   3e-06
emb|CBI19521.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containi...    49   4e-06
ref|XP_006656923.1| PREDICTED: pentatricopeptide repeat-containi...    49   5e-06
ref|XP_002884396.1| pentatricopeptide repeat-containing protein ...    50   8e-06

>ref|XP_006418543.1| hypothetical protein EUTSA_v10002423mg [Eutrema salsugineum]
           gi|557096471|gb|ESQ36979.1| hypothetical protein
           EUTSA_v10002423mg [Eutrema salsugineum]
          Length = 690

 Score = 53.1 bits (126), Expect(2) = 3e-08
 Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
 Frame = +1

Query: 58  WNSIIKTCLENKKFNMGI--------SSLPPNVANHLTFSLVIKACTSLSDSPYLKQE-- 207
           ++S++K+C+     +  I        SSL PN   H T S++++A T+  DS  L Q   
Sbjct: 17  FHSLLKSCVHGDNSSSPITIFRDLLRSSLTPN---HFTMSILLQASTASVDSLKLVQTHI 73

Query: 208 AKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
            KS  D F ++ T+LL++Y K GF+  A +LF+ MP+R+
Sbjct: 74  TKSGIDRFIYVKTSLLDIYLKMGFVKTARKLFDEMPERD 112



 Score = 30.0 bits (66), Expect(2) = 3e-08
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +2

Query: 347 AWNSLICGYSYNG 385
           AWN+LICGYS NG
Sbjct: 115 AWNALICGYSRNG 127


>ref|XP_006854337.1| hypothetical protein AMTR_s00039p00132380 [Amborella trichopoda]
           gi|548858013|gb|ERN15804.1| hypothetical protein
           AMTR_s00039p00132380 [Amborella trichopoda]
          Length = 705

 Score = 55.5 bits (132), Expect(2) = 7e-08
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 19/112 (16%)
 Frame = +1

Query: 46  NVFLWNSIIKTCLENKKF-----------NMGISSLPPNVANHLTFSLVIKACTSLSDSP 192
           N   WNS+I+ C  N +            N G+S       + LT++LV+KACT LSD  
Sbjct: 115 NSIFWNSMIRGCCINGRLEEMIDIYSEMMNSGVSP------DKLTYNLVLKACTDLSDFE 168

Query: 193 Y--------LKQEAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
           Y        +++ ++   D    +GT+L+N+Y+K G + FA  LF+ MP R+
Sbjct: 169 YGLRIHDQIVQRSSECEVD--VLVGTSLVNMYSKFGDVCFARSLFDRMPLRD 218



 Score = 26.6 bits (57), Expect(2) = 7e-08
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 341 LFAWNSLICGYSYNGDIS 394
           + AWN++I GYS NG +S
Sbjct: 219 IVAWNAMISGYSRNGLLS 236


>ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g21470-like [Solanum lycopersicum]
          Length = 528

 Score = 53.5 bits (127), Expect(2) = 4e-07
 Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
 Frame = +1

Query: 58  WNSIIKTCLENKKFNMGISSLPPNVANHL----TFSLVIKACTSLSDSPYLK----QEAK 213
           W+  IK C+   KF   + +   N  N         LV+KAC SLS     K    +  K
Sbjct: 9   WSYSIKNCISQGKFKEALLTYTHNRINGSFIMGVVPLVLKACASLSMLSLGKALHAESVK 68

Query: 214 SRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKR 321
           S FD    +GTALL++Y KCG I  A ++F+ MP+R
Sbjct: 69  SGFDCNVMVGTALLDMYGKCGEIRSARKVFDYMPER 104



 Score = 26.2 bits (56), Expect(2) = 4e-07
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 320 ENFFSLFLFAWNSLICGYSYNGDISPCRA 406
           EN        WN +I GY+ NGD+   R+
Sbjct: 130 ENMSEKTTVTWNEMIDGYARNGDMVMARS 158


>ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
          Length = 1008

 Score = 51.6 bits (122), Expect(2) = 8e-07
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
 Frame = +1

Query: 22  LFHSSSILNVFLWNSIIKTCLENKK----FNMGISSLPPNVA-NHLTFSLVIKACTSLSD 186
           LF S++  NV +WNS+I    +N+K    F M    L  N+  N +TF  +I  C + ++
Sbjct: 313 LFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSAN 372

Query: 187 SPYLKQ----EAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKR 321
             Y K       K R D    + TALL++YAK G +  AD +F  MP+R
Sbjct: 373 FWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRR 421



 Score = 26.9 bits (58), Expect(2) = 8e-07
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 341 LFAWNSLICGYSYNG 385
           L +WNS+I GY +NG
Sbjct: 423 LLSWNSMISGYGHNG 437


>ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Fragaria vesca subsp. vesca]
          Length = 706

 Score = 53.9 bits (128), Expect(2) = 8e-07
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 11/74 (14%)
 Frame = +1

Query: 136 NHLTFSLVIKACTSLSD---SPYLKQEA--------KSRFD*FAHMGTALLNLYAKCGFI 282
           N LTFSL++KACTS S    S   K E         KS FD F ++GTALL+LY K G +
Sbjct: 49  NDLTFSLLLKACTSSSSYLASGNAKLEVNQIHTHLLKSGFDRFVYVGTALLDLYMKLGQV 108

Query: 283 LFADQLFE*MPKRE 324
             A ++F+ MP+R+
Sbjct: 109 RNAQKMFDGMPERD 122



 Score = 24.6 bits (52), Expect(2) = 8e-07
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 347 AWNSLICGYSYNG 385
           +WN++ICG S NG
Sbjct: 125 SWNAVICGVSRNG 137


>ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g04860 gi|330250783|gb|AEC05877.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 692

 Score = 49.3 bits (116), Expect(2) = 1e-06
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
 Frame = +1

Query: 58  WNSIIKTCLENKKFNMGI--------SSLPPNVANHLTFSLVIKACTSLSDSPYLKQE-- 207
           ++S++K+C+  +  +  I        SSL PN   H T S+ ++A T+  +S  L+ E  
Sbjct: 16  FHSLLKSCIHGEISSSPITIFRDLLRSSLTPN---HFTMSIFLQATTTSFNSFKLQVEQV 72

Query: 208 ----AKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
                KS  D F ++ T+LLNLY K G +  A  LF+ MP+R+
Sbjct: 73  QTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERD 115



 Score = 28.5 bits (62), Expect(2) = 1e-06
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = +2

Query: 350 WNSLICGYSYNG 385
           WN+LICGYS NG
Sbjct: 119 WNALICGYSRNG 130


>ref|XP_006826843.1| hypothetical protein AMTR_s00010p00101850 [Amborella trichopoda]
           gi|548831272|gb|ERM94080.1| hypothetical protein
           AMTR_s00010p00101850 [Amborella trichopoda]
          Length = 550

 Score = 50.1 bits (118), Expect(2) = 1e-06
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
 Frame = +1

Query: 43  LNVFLWNSIIKTCLENKKFNMGISSLPPNVA-----NHLTFSLVIKACTSLSDSPYLKQ- 204
           LN    N+ I  C++N +    +  L  ++      N  T SLVIKAC SLS  P LKQ 
Sbjct: 52  LNCSSLNTEICDCIKNSEHKWALVLLKLSLKSCIKPNGFTLSLVIKACASLSSLPVLKQI 111

Query: 205 ---EAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
                K+ FD    + TAL++ Y KC  + F+ ++F+ M  R+
Sbjct: 112 HTHVFKTAFDHCIFVNTALIDGYGKCLVMEFSQKVFDEMCHRD 154



 Score = 27.7 bits (60), Expect(2) = 1e-06
 Identities = 11/13 (84%), Positives = 11/13 (84%)
 Frame = +2

Query: 347 AWNSLICGYSYNG 385
           AWNSLI GYS NG
Sbjct: 157 AWNSLISGYSING 169


>ref|XP_006848936.1| hypothetical protein AMTR_s00166p00033330 [Amborella trichopoda]
           gi|548852397|gb|ERN10517.1| hypothetical protein
           AMTR_s00166p00033330 [Amborella trichopoda]
          Length = 240

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
 Frame = +1

Query: 22  LFHSSSILNVFLWNSIIKTCLENK------KFNMGISSLPPNVANHLTFSLVIKACTSLS 183
           +FH     N+ LWN +IKT ++N        F   +++  P   N+ TF  ++ +C +L 
Sbjct: 61  VFHCVPHPNLSLWNELIKTHVKNSLHTQALSFYAAMTATTPLKPNNFTFPFLLNSCAALL 120

Query: 184 DSPYLKQE----AKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
             P   +      K+ F  +  +  AL+++YAKCG +LFA   F+ MP+R+
Sbjct: 121 SLPRGSEIHGRIVKTGFSLYLPVKNALIDMYAKCGNLLFARLAFDEMPQRD 171


>ref|XP_007225449.1| hypothetical protein PRUPE_ppa000328mg [Prunus persica]
           gi|462422385|gb|EMJ26648.1| hypothetical protein
           PRUPE_ppa000328mg [Prunus persica]
          Length = 1279

 Score = 49.3 bits (116), Expect(2) = 3e-06
 Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 16/79 (20%)
 Frame = +1

Query: 136 NHLTFSLVIKACTSLSDSPY--------LKQEA--------KSRFD*FAHMGTALLNLYA 267
           N LTFSL++KACTS S S          +K++A        KS  D F ++ TALL+LY 
Sbjct: 49  NDLTFSLLLKACTSSSSSSSSSALNSVNVKRDANQIHTHLLKSGVDRFMYVSTALLDLYM 108

Query: 268 KCGFILFADQLFE*MPKRE 324
           K G +  A +LF+ MP R+
Sbjct: 109 KLGCVRNAHRLFDDMPDRD 127



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +2

Query: 347 AWNSLICGYSYNG 385
           +WN+LICG+S NG
Sbjct: 130 SWNALICGFSRNG 142


>emb|CBI19521.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 19/115 (16%)
 Frame = +1

Query: 37  SILNVFLWNSIIKTCLENKKFNMGISS----LPPNVA-NHLTFSLVIKA------CTSLS 183
           SI N+ +++S+ K+C E K       +    L  NV  + LTFSL+IKA       +++ 
Sbjct: 109 SIPNISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVI 168

Query: 184 DSPYLKQEA--------KSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
           DSP  K EA        KS F+ + ++ TA L+ Y K G I +A  LFE MP+R+
Sbjct: 169 DSPNTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRD 223


>ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score = 49.3 bits (116), Expect(2) = 4e-06
 Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
 Frame = +1

Query: 136 NHLTFSLVIKACTSLSDS-------------PYLKQEAKSRFD*FAHMGTALLNLYAKCG 276
           NHLTFSL+IKAC S S S                 Q  K   D F ++ TAL++ Y K G
Sbjct: 33  NHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGIDQFLYVNTALIDFYMKLG 92

Query: 277 FILFADQLFE*MPKRE 324
           F   A QLFE +P  +
Sbjct: 93  FTTHARQLFEDLPSAD 108



 Score = 26.9 bits (58), Expect(2) = 4e-06
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 320 ENFFSLFLFAWNSLICGYSYNG 385
           E+  S  + +WN LICGYS +G
Sbjct: 102 EDLPSADVVSWNVLICGYSQHG 123


>ref|XP_006656923.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Oryza brachyantha]
          Length = 823

 Score = 48.5 bits (114), Expect(2) = 5e-06
 Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
 Frame = +1

Query: 22  LFHSSSILNVFLWNSIIKTCLENKKFNMGISSLPPNVA-----NHLTFSLVIKACTSLSD 186
           LF S +  N  LWNS+I   L N K+NM + S+          + LT   VI AC    D
Sbjct: 233 LFSSLTEKNQLLWNSLISGYLVNNKWNMVLDSVCKMQTEGVDPDALTIINVISACRHTKD 292

Query: 187 SPYLKQ----EAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*M 312
               K       +SRF+    +  ALL +YA CG +  ++QLF+ M
Sbjct: 293 LRVAKSIHAYAVRSRFEMNDSVMNALLTMYAACGELSTSNQLFQKM 338



 Score = 27.3 bits (59), Expect(2) = 5e-06
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 341 LFAWNSLICGYSYNGDISPC 400
           L +WN++I G++ NGD   C
Sbjct: 343 LISWNTIISGFAENGDSMSC 362


>ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330236|gb|EFH60655.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 882

 Score = 49.7 bits (117), Expect(2) = 8e-06
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
 Frame = +1

Query: 46  NVFLWNSIIKTCLENKKFNMGI--------SSLPPNVANHLTFSLVIKACTSLSDSP--- 192
           NV++WNSII+   +N  F   +        S + P   +  TF  VIKAC  L D+    
Sbjct: 70  NVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSP---DKYTFPSVIKACAGLFDAEMGD 126

Query: 193 -YLKQEAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
              KQ  +  F+   ++G AL+++Y++ G +  A Q+F+ MP R+
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRD 171



 Score = 25.4 bits (54), Expect(2) = 8e-06
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 341 LFAWNSLICGYSYNG 385
           L +WNSLI GYS +G
Sbjct: 172 LVSWNSLISGYSSHG 186


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