BLASTX nr result
ID: Akebia27_contig00042754
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00042754
(423 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006418543.1| hypothetical protein EUTSA_v10002423mg [Eutr... 53 3e-08
ref|XP_006854337.1| hypothetical protein AMTR_s00039p00132380 [A... 55 7e-08
ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containi... 54 4e-07
ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containi... 52 8e-07
ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containi... 54 8e-07
ref|NP_178563.2| pentatricopeptide repeat-containing protein [Ar... 49 1e-06
ref|XP_006826843.1| hypothetical protein AMTR_s00010p00101850 [A... 50 1e-06
ref|XP_006848936.1| hypothetical protein AMTR_s00166p00033330 [A... 57 2e-06
ref|XP_007225449.1| hypothetical protein PRUPE_ppa000328mg [Prun... 49 3e-06
emb|CBI19521.3| unnamed protein product [Vitis vinifera] 57 3e-06
ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containi... 49 4e-06
ref|XP_006656923.1| PREDICTED: pentatricopeptide repeat-containi... 49 5e-06
ref|XP_002884396.1| pentatricopeptide repeat-containing protein ... 50 8e-06
>ref|XP_006418543.1| hypothetical protein EUTSA_v10002423mg [Eutrema salsugineum]
gi|557096471|gb|ESQ36979.1| hypothetical protein
EUTSA_v10002423mg [Eutrema salsugineum]
Length = 690
Score = 53.1 bits (126), Expect(2) = 3e-08
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Frame = +1
Query: 58 WNSIIKTCLENKKFNMGI--------SSLPPNVANHLTFSLVIKACTSLSDSPYLKQE-- 207
++S++K+C+ + I SSL PN H T S++++A T+ DS L Q
Sbjct: 17 FHSLLKSCVHGDNSSSPITIFRDLLRSSLTPN---HFTMSILLQASTASVDSLKLVQTHI 73
Query: 208 AKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
KS D F ++ T+LL++Y K GF+ A +LF+ MP+R+
Sbjct: 74 TKSGIDRFIYVKTSLLDIYLKMGFVKTARKLFDEMPERD 112
Score = 30.0 bits (66), Expect(2) = 3e-08
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2
Query: 347 AWNSLICGYSYNG 385
AWN+LICGYS NG
Sbjct: 115 AWNALICGYSRNG 127
>ref|XP_006854337.1| hypothetical protein AMTR_s00039p00132380 [Amborella trichopoda]
gi|548858013|gb|ERN15804.1| hypothetical protein
AMTR_s00039p00132380 [Amborella trichopoda]
Length = 705
Score = 55.5 bits (132), Expect(2) = 7e-08
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 19/112 (16%)
Frame = +1
Query: 46 NVFLWNSIIKTCLENKKF-----------NMGISSLPPNVANHLTFSLVIKACTSLSDSP 192
N WNS+I+ C N + N G+S + LT++LV+KACT LSD
Sbjct: 115 NSIFWNSMIRGCCINGRLEEMIDIYSEMMNSGVSP------DKLTYNLVLKACTDLSDFE 168
Query: 193 Y--------LKQEAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
Y +++ ++ D +GT+L+N+Y+K G + FA LF+ MP R+
Sbjct: 169 YGLRIHDQIVQRSSECEVD--VLVGTSLVNMYSKFGDVCFARSLFDRMPLRD 218
Score = 26.6 bits (57), Expect(2) = 7e-08
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 341 LFAWNSLICGYSYNGDIS 394
+ AWN++I GYS NG +S
Sbjct: 219 IVAWNAMISGYSRNGLLS 236
>ref|XP_004237759.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g21470-like [Solanum lycopersicum]
Length = 528
Score = 53.5 bits (127), Expect(2) = 4e-07
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Frame = +1
Query: 58 WNSIIKTCLENKKFNMGISSLPPNVANHL----TFSLVIKACTSLSDSPYLK----QEAK 213
W+ IK C+ KF + + N N LV+KAC SLS K + K
Sbjct: 9 WSYSIKNCISQGKFKEALLTYTHNRINGSFIMGVVPLVLKACASLSMLSLGKALHAESVK 68
Query: 214 SRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKR 321
S FD +GTALL++Y KCG I A ++F+ MP+R
Sbjct: 69 SGFDCNVMVGTALLDMYGKCGEIRSARKVFDYMPER 104
Score = 26.2 bits (56), Expect(2) = 4e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 320 ENFFSLFLFAWNSLICGYSYNGDISPCRA 406
EN WN +I GY+ NGD+ R+
Sbjct: 130 ENMSEKTTVTWNEMIDGYARNGDMVMARS 158
>ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 51.6 bits (122), Expect(2) = 8e-07
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Frame = +1
Query: 22 LFHSSSILNVFLWNSIIKTCLENKK----FNMGISSLPPNVA-NHLTFSLVIKACTSLSD 186
LF S++ NV +WNS+I +N+K F M L N+ N +TF +I C + ++
Sbjct: 313 LFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSAN 372
Query: 187 SPYLKQ----EAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKR 321
Y K K R D + TALL++YAK G + AD +F MP+R
Sbjct: 373 FWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRR 421
Score = 26.9 bits (58), Expect(2) = 8e-07
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 341 LFAWNSLICGYSYNG 385
L +WNS+I GY +NG
Sbjct: 423 LLSWNSMISGYGHNG 437
>ref|XP_004292817.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Fragaria vesca subsp. vesca]
Length = 706
Score = 53.9 bits (128), Expect(2) = 8e-07
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 11/74 (14%)
Frame = +1
Query: 136 NHLTFSLVIKACTSLSD---SPYLKQEA--------KSRFD*FAHMGTALLNLYAKCGFI 282
N LTFSL++KACTS S S K E KS FD F ++GTALL+LY K G +
Sbjct: 49 NDLTFSLLLKACTSSSSYLASGNAKLEVNQIHTHLLKSGFDRFVYVGTALLDLYMKLGQV 108
Query: 283 LFADQLFE*MPKRE 324
A ++F+ MP+R+
Sbjct: 109 RNAQKMFDGMPERD 122
Score = 24.6 bits (52), Expect(2) = 8e-07
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +2
Query: 347 AWNSLICGYSYNG 385
+WN++ICG S NG
Sbjct: 125 SWNAVICGVSRNG 137
>ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g04860 gi|330250783|gb|AEC05877.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 49.3 bits (116), Expect(2) = 1e-06
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 14/103 (13%)
Frame = +1
Query: 58 WNSIIKTCLENKKFNMGI--------SSLPPNVANHLTFSLVIKACTSLSDSPYLKQE-- 207
++S++K+C+ + + I SSL PN H T S+ ++A T+ +S L+ E
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSSLTPN---HFTMSIFLQATTTSFNSFKLQVEQV 72
Query: 208 ----AKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
KS D F ++ T+LLNLY K G + A LF+ MP+R+
Sbjct: 73 QTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERD 115
Score = 28.5 bits (62), Expect(2) = 1e-06
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 350 WNSLICGYSYNG 385
WN+LICGYS NG
Sbjct: 119 WNALICGYSRNG 130
>ref|XP_006826843.1| hypothetical protein AMTR_s00010p00101850 [Amborella trichopoda]
gi|548831272|gb|ERM94080.1| hypothetical protein
AMTR_s00010p00101850 [Amborella trichopoda]
Length = 550
Score = 50.1 bits (118), Expect(2) = 1e-06
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Frame = +1
Query: 43 LNVFLWNSIIKTCLENKKFNMGISSLPPNVA-----NHLTFSLVIKACTSLSDSPYLKQ- 204
LN N+ I C++N + + L ++ N T SLVIKAC SLS P LKQ
Sbjct: 52 LNCSSLNTEICDCIKNSEHKWALVLLKLSLKSCIKPNGFTLSLVIKACASLSSLPVLKQI 111
Query: 205 ---EAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
K+ FD + TAL++ Y KC + F+ ++F+ M R+
Sbjct: 112 HTHVFKTAFDHCIFVNTALIDGYGKCLVMEFSQKVFDEMCHRD 154
Score = 27.7 bits (60), Expect(2) = 1e-06
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 347 AWNSLICGYSYNG 385
AWNSLI GYS NG
Sbjct: 157 AWNSLISGYSING 169
>ref|XP_006848936.1| hypothetical protein AMTR_s00166p00033330 [Amborella trichopoda]
gi|548852397|gb|ERN10517.1| hypothetical protein
AMTR_s00166p00033330 [Amborella trichopoda]
Length = 240
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 10/111 (9%)
Frame = +1
Query: 22 LFHSSSILNVFLWNSIIKTCLENK------KFNMGISSLPPNVANHLTFSLVIKACTSLS 183
+FH N+ LWN +IKT ++N F +++ P N+ TF ++ +C +L
Sbjct: 61 VFHCVPHPNLSLWNELIKTHVKNSLHTQALSFYAAMTATTPLKPNNFTFPFLLNSCAALL 120
Query: 184 DSPYLKQE----AKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
P + K+ F + + AL+++YAKCG +LFA F+ MP+R+
Sbjct: 121 SLPRGSEIHGRIVKTGFSLYLPVKNALIDMYAKCGNLLFARLAFDEMPQRD 171
>ref|XP_007225449.1| hypothetical protein PRUPE_ppa000328mg [Prunus persica]
gi|462422385|gb|EMJ26648.1| hypothetical protein
PRUPE_ppa000328mg [Prunus persica]
Length = 1279
Score = 49.3 bits (116), Expect(2) = 3e-06
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 16/79 (20%)
Frame = +1
Query: 136 NHLTFSLVIKACTSLSDSPY--------LKQEA--------KSRFD*FAHMGTALLNLYA 267
N LTFSL++KACTS S S +K++A KS D F ++ TALL+LY
Sbjct: 49 NDLTFSLLLKACTSSSSSSSSSALNSVNVKRDANQIHTHLLKSGVDRFMYVSTALLDLYM 108
Query: 268 KCGFILFADQLFE*MPKRE 324
K G + A +LF+ MP R+
Sbjct: 109 KLGCVRNAHRLFDDMPDRD 127
Score = 27.3 bits (59), Expect(2) = 3e-06
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2
Query: 347 AWNSLICGYSYNG 385
+WN+LICG+S NG
Sbjct: 130 SWNALICGFSRNG 142
>emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 56.6 bits (135), Expect = 3e-06
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 19/115 (16%)
Frame = +1
Query: 37 SILNVFLWNSIIKTCLENKKFNMGISS----LPPNVA-NHLTFSLVIKA------CTSLS 183
SI N+ +++S+ K+C E K + L NV + LTFSL+IKA +++
Sbjct: 109 SIPNISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVI 168
Query: 184 DSPYLKQEA--------KSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
DSP K EA KS F+ + ++ TA L+ Y K G I +A LFE MP+R+
Sbjct: 169 DSPNTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRD 223
>ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 49.3 bits (116), Expect(2) = 4e-06
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
Frame = +1
Query: 136 NHLTFSLVIKACTSLSDS-------------PYLKQEAKSRFD*FAHMGTALLNLYAKCG 276
NHLTFSL+IKAC S S S Q K D F ++ TAL++ Y K G
Sbjct: 33 NHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGIDQFLYVNTALIDFYMKLG 92
Query: 277 FILFADQLFE*MPKRE 324
F A QLFE +P +
Sbjct: 93 FTTHARQLFEDLPSAD 108
Score = 26.9 bits (58), Expect(2) = 4e-06
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 320 ENFFSLFLFAWNSLICGYSYNG 385
E+ S + +WN LICGYS +G
Sbjct: 102 EDLPSADVVSWNVLICGYSQHG 123
>ref|XP_006656923.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Oryza brachyantha]
Length = 823
Score = 48.5 bits (114), Expect(2) = 5e-06
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 9/106 (8%)
Frame = +1
Query: 22 LFHSSSILNVFLWNSIIKTCLENKKFNMGISSLPPNVA-----NHLTFSLVIKACTSLSD 186
LF S + N LWNS+I L N K+NM + S+ + LT VI AC D
Sbjct: 233 LFSSLTEKNQLLWNSLISGYLVNNKWNMVLDSVCKMQTEGVDPDALTIINVISACRHTKD 292
Query: 187 SPYLKQ----EAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*M 312
K +SRF+ + ALL +YA CG + ++QLF+ M
Sbjct: 293 LRVAKSIHAYAVRSRFEMNDSVMNALLTMYAACGELSTSNQLFQKM 338
Score = 27.3 bits (59), Expect(2) = 5e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 341 LFAWNSLICGYSYNGDISPC 400
L +WN++I G++ NGD C
Sbjct: 343 LISWNTIISGFAENGDSMSC 362
>ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297330236|gb|EFH60655.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 882
Score = 49.7 bits (117), Expect(2) = 8e-06
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Frame = +1
Query: 46 NVFLWNSIIKTCLENKKFNMGI--------SSLPPNVANHLTFSLVIKACTSLSDSP--- 192
NV++WNSII+ +N F + S + P + TF VIKAC L D+
Sbjct: 70 NVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSP---DKYTFPSVIKACAGLFDAEMGD 126
Query: 193 -YLKQEAKSRFD*FAHMGTALLNLYAKCGFILFADQLFE*MPKRE 324
KQ + F+ ++G AL+++Y++ G + A Q+F+ MP R+
Sbjct: 127 LVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRD 171
Score = 25.4 bits (54), Expect(2) = 8e-06
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 341 LFAWNSLICGYSYNG 385
L +WNSLI GYS +G
Sbjct: 172 LVSWNSLISGYSSHG 186