BLASTX nr result
ID: Akebia27_contig00041147
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia27_contig00041147 (644 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] 96 1e-17 gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 91 3e-16 gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 88 2e-15 ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 82 1e-13 gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 81 3e-13 ref|XP_004963470.1| PREDICTED: uncharacterized protein LOC101764... 80 5e-13 ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus... 79 9e-13 gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 79 2e-12 ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 78 2e-12 gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 78 2e-12 gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 78 2e-12 emb|CAN79574.1| hypothetical protein VITISV_017342 [Vitis vinifera] 77 3e-12 gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 76 8e-12 gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 76 1e-11 gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 74 5e-11 dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 74 5e-11 gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 71 2e-10 ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis t... 71 2e-10 emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 71 2e-10 gb|AAB84340.1| putative non-LTR retroelement reverse transcripta... 71 2e-10 >gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea] Length = 381 Score = 95.5 bits (236), Expect = 1e-17 Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 4/193 (2%) Frame = +1 Query: 76 EEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWAT 255 +EE+F+R KSR+ WL GDRN RFF++S + A+N I+ ++ N GE + A Sbjct: 133 DEEAFWRNKSRIQWLTYGDRNIRFFHASTKNRRAKNKILSIQNNLGEEVFGNKEISKEAL 192 Query: 256 RFYSKMFQNS-SPNVSFQIPFNSKFIEE--NVHILLNHVDKRQNL*FFSLQGIKLRA-RW 423 R++S++F +S N+ + ++ + + N ++ + + + FS+ + Sbjct: 193 RYFSEIFTSSLQGNIQDSLGNINRVVSDECNAYLSRDVTAEEVRISVFSIGATRAPGPDG 252 Query: 424 IWYGIFHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALC 603 + + + G + +F G+ D+N T LC+IPK N +++F+PIALC Sbjct: 253 LTASFYQTYWDIVGPAVVEEVRHFFNTGEFYSDLNHTNLCLIPKITNPITMKDFRPIALC 312 Query: 604 NFVYKILSN*LAL 642 N +YKI+S L+L Sbjct: 313 NVMYKIISKILSL 325 >gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1374 Score = 90.9 bits (224), Expect = 3e-16 Identities = 63/221 (28%), Positives = 112/221 (50%), Gaps = 14/221 (6%) Frame = +1 Query: 19 PMDRVQEAEALKVNNAQLDEEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMEL 198 P DR + A K + + + EE F+++KSR+ W+R GDRN+++F+++ + A+N I +L Sbjct: 312 PFDRRELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKL 371 Query: 199 ETNQG-ELIIDEDSSRAWATRFYSKMF------------QNSSPNVSFQIPFNSKFIEEN 339 +G E DED R A ++ K+F +N +P VS Q+ N Sbjct: 372 IDEEGREWTSDEDLGRV-AEAYFKKLFASEDVGYTVEELENLTPLVSDQM---------N 421 Query: 340 VHILLNHVDKRQNL*FFSLQGIKLRARWIWYG-IFHLFLGYCGEECL*CSYRYFRHGKML 516 ++L + FS+ K G ++ F G++ +FR G + Sbjct: 422 NNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIE 481 Query: 517 KDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKILSN*LA 639 + +N T +C+IPK A+++ +F+PI+LCN +YK++ +A Sbjct: 482 EGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMA 522 >gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1447 Score = 88.2 bits (217), Expect = 2e-15 Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 11/198 (5%) Frame = +1 Query: 79 EESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWATR 258 EE F +KKS++ WL GD+N++ F+ ++ + A+N I E++ G + D +A+A R Sbjct: 761 EEKFLKKKSKLHWLDGGDKNNKAFHRAVVTREAQNSISEIQCQDGSVTAKGDEIKAYAER 820 Query: 259 FYSKMFQ---NSSPNVSFQ-----IPFNSKFIEENVHILLNHVDKRQNL--*FFSLQGIK 408 F+ + Q N V+ +PF E H LL V + + FS+ K Sbjct: 821 FFREFLQLIPNEYEGVTMADLQDLLPFR---CSETEHELLTRVVTAEEIKKVLFSMPNDK 877 Query: 409 LRA-RWIWYGIFHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEF 585 F G E + +F G + K +N T+L +IPK++ AK ++++ Sbjct: 878 SPGPDGFTSEFFKATWEILGNEFILAIQSFFAKGFLPKGINTTILALIPKKKEAKEMKDY 937 Query: 586 KPIALCNFVYKILSN*LA 639 +PI+ CN +YK++S +A Sbjct: 938 RPISCCNVIYKVISKIIA 955 >ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis] Length = 2303 Score = 82.0 bits (201), Expect = 1e-13 Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 16/226 (7%) Frame = +1 Query: 10 QRQPMDRVQEAEALKVNNAQLDEEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGI 189 QR D+++ E N L +EE ++R++SR WL+EGDRN+++F+S ++ +N I Sbjct: 287 QRMNGDQIRRIE--NQINGMLMDEEIYWRQRSRAEWLKEGDRNTKYFHSKASARRRKNKI 344 Query: 190 MELETNQGELIIDEDSSRAWATRFYSKMFQNSSPN----------VSFQIPFN------S 321 +E + G+ D+ ++ +F SSPN +S ++ N Sbjct: 345 WGIENSHGQWTEDQREVEKEFCEYFQNLFTTSSPNQSQIQDALDGISPKVTTNMNHQLEE 404 Query: 322 KFIEENVHILLNHVDKRQNL*FFSLQGIKLRARWIWYGIFHLFLGYCGEECL*CSYRYFR 501 F EE + L+ + + L + W + +G C Sbjct: 405 PFTEEEIVEALHQMSPTKAPGPDGLPAAFFQKH--WQTVRSSVIGTC--------MHILN 454 Query: 502 HGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKILSN*LA 639 G L +N T + +IPK K++ EF+PI+LCN +Y+I++ +A Sbjct: 455 EGGNLSALNHTFIALIPKTTKPKKVTEFRPISLCNVIYRIVAKTIA 500 >gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 80.9 bits (198), Expect = 3e-13 Identities = 61/195 (31%), Positives = 96/195 (49%), Gaps = 8/195 (4%) Frame = +1 Query: 79 EESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWATR 258 EE F +KSRV WL+ GD N+ FF+ + + A N I L G I + D + Sbjct: 346 EERFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVD 405 Query: 259 FYSKMFQNSSPNVSF----QIPFNSKF-IEENVHILLNHVDKRQNL*--FFSLQGIKLRA 417 F+ ++F +SS +S QI ++F +EN LL ++ FF+L K Sbjct: 406 FFKELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPG 465 Query: 418 RWIWYG-IFHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPI 594 + F G + +FR G++L N+T + ++PK+ NA R+ EF+PI Sbjct: 466 PDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNADRITEFRPI 525 Query: 595 ALCNFVYKILSN*LA 639 + CN +YK++S LA Sbjct: 526 SCCNAIYKVISKLLA 540 >ref|XP_004963470.1| PREDICTED: uncharacterized protein LOC101764448 [Setaria italica] Length = 1051 Score = 80.1 bits (196), Expect = 5e-13 Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 4/194 (2%) Frame = +1 Query: 70 LDEEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAW 249 L +EE +++SR+ WL+EGDRN+ FF + N I L+ G L ++ Sbjct: 600 LAKEECMEQQRSRIQWLKEGDRNTAFFQAKSRERAKNNRIHALKREDGSLASTQEELEVT 659 Query: 250 ATRFYSKMFQNSS---PNVSFQIPFNSKFIEENVHILLNHVDKRQNL*FFSLQGIKLRAR 420 A FY+K+F P E N + + F + K Sbjct: 660 AMEFYTKLFTRQEVLDPGPVIDCVPTRVTTEMNEFLTKPFTPEEVKAALFMMGPNKAPGP 719 Query: 421 -WIWYGIFHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIA 597 + G F G+ + + G+M + VN+T L +IPK ++ + +++F+PI+ Sbjct: 720 DGLTAGFFQFHWEAVGQNVMDAVLHFLNGGRMPESVNSTTLVLIPKVKHPQEMKQFRPIS 779 Query: 598 LCNFVYKILSN*LA 639 LCN +YKI S LA Sbjct: 780 LCNVIYKICSKILA 793 >ref|XP_006482658.1| PREDICTED: cytochrome P450 89A2-like [Citrus sinensis] Length = 809 Score = 79.3 bits (194), Expect = 9e-13 Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 16/206 (7%) Frame = +1 Query: 70 LDEEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAW 249 L +EE + +KSR WL +GDRN+ +F+ + RN I ++ GE I+D + + Sbjct: 571 LTQEEILWLQKSRKEWLIQGDRNTAYFHQKTLARRRRNRITTIQNANGEWIVDNEIIKQH 630 Query: 250 ATRFYSKMFQNSSPNVSFQ-------IPFNSKFIEENVHILLNHVDKRQNL*FFSLQGIK 408 AT F+S ++ +S + F+ P + + + + RQ + FS++ +K Sbjct: 631 ATAFFSTLY--TSETLDFRPYPVRGCFPILDAALTHGLMAPIEDNEIRQTI--FSMKPLK 686 Query: 409 ------LRARWI---WYGIFHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEE 561 L A + W+ + H F + F +LKD+N TLL +IPK + Sbjct: 687 APGVDGLHAIFYQSQWHIVGHSFCKFIKNS--------FSSASILKDINTTLLVLIPKVD 738 Query: 562 NAKRLEEFKPIALCNFVYKILSN*LA 639 + L+ ++PI+LC YK +S +A Sbjct: 739 HPVNLKMYRPISLCTVAYKTISKIVA 764 >gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score: 72.31) [Arabidopsis thaliana] Length = 928 Score = 78.6 bits (192), Expect = 2e-12 Identities = 50/197 (25%), Positives = 101/197 (51%), Gaps = 10/197 (5%) Frame = +1 Query: 79 EESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWATR 258 EE F +++S++ WL GDRN++ F+ ++ + A+N I E+ + G + E+ + A Sbjct: 241 EEKFLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEH 300 Query: 259 FYSKMFQ---NSSPNVSFQ-----IPFNSKFIEENVHILLNHVDKRQ-NL*FFSLQGIKL 411 + + Q N ++ + +P+ + + +L NHV + + FS+ K Sbjct: 301 HFREFLQLIPNDFEGIAVEELQDLLPYRCS--DSDKEMLTNHVSAEEIHKVVFSMPNDKS 358 Query: 412 RARWIWYGIFHLFL-GYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFK 588 + F+ G E + +F G + K +N+T+L +IPK++ AK +++++ Sbjct: 359 PGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYR 418 Query: 589 PIALCNFVYKILSN*LA 639 PI+ CN +YK++S +A Sbjct: 419 PISCCNVLYKVISKIIA 435 >ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria vesca subsp. vesca] Length = 1152 Score = 78.2 bits (191), Expect = 2e-12 Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 1/191 (0%) Frame = +1 Query: 70 LDEEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAW 249 L ++++F++++SRV WL EGD N++FF+ ++ +N + L G DE Sbjct: 113 LHKKQTFWQQRSRVLWLAEGDLNTKFFHQRASNRKKKNTLKGLFNEDGVWCNDECEMEEI 172 Query: 250 ATRFYSKMFQNSSPNVSFQ-IPFNSKFIEENVHILLNHVDKRQNL*FFSLQGIKLRARWI 426 R+Y K+F +S+P + Q + F ++ I E+ + LN + Sbjct: 173 ILRYYKKLFTSSNPQLREQDLSFVTEVISEDANRRLNGTISEEE---------------- 216 Query: 427 WYGIFHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCN 606 F G + + + ++L+++N T + +IPK ++ + + + +PI+LCN Sbjct: 217 -------FWNVVGTDVVAAVREFLNSKELLREINCTWVTLIPKVKSPEYVTQLRPISLCN 269 Query: 607 FVYKILSN*LA 639 +YK+ S LA Sbjct: 270 VIYKLGSKVLA 280 >gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] Length = 1270 Score = 78.2 bits (191), Expect = 2e-12 Identities = 51/194 (26%), Positives = 104/194 (53%), Gaps = 6/194 (3%) Frame = +1 Query: 76 EEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWAT 255 EEE+++++KSR WLR G+RNS++F++++ N R I +L+ G + E + A Sbjct: 294 EEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAA 353 Query: 256 RFYSKMFQNSSPN-----VSFQIPFNSKFIEENVHILLNHVDKRQNL*FFSLQGIKLRAR 420 ++ +F++S+P+ S +P S+ + E++ ++ + ++ + FS++ Sbjct: 354 AYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAV--FSIKPASAPGP 411 Query: 421 WIWYGI-FHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIA 597 + F + G + ++F G M + N T LC+IPK ++ + + +PI+ Sbjct: 412 DGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPIS 471 Query: 598 LCNFVYKILSN*LA 639 LC+ +YKI+S +A Sbjct: 472 LCSVLYKIISKIMA 485 >gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] Length = 1254 Score = 78.2 bits (191), Expect = 2e-12 Identities = 51/194 (26%), Positives = 104/194 (53%), Gaps = 6/194 (3%) Frame = +1 Query: 76 EEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWAT 255 EEE+++++KSR WLR G+RNS++F++++ N R I +L+ G + E + A Sbjct: 297 EEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAA 356 Query: 256 RFYSKMFQNSSPN-----VSFQIPFNSKFIEENVHILLNHVDKRQNL*FFSLQGIKLRAR 420 ++ +F++S+P+ S +P S+ + E++ ++ + ++ + FS++ Sbjct: 357 AYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAV--FSIKPASAPGP 414 Query: 421 WIWYGI-FHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPIA 597 + F + G + ++F G M + N T LC+IPK ++ + + +PI+ Sbjct: 415 DGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPIS 474 Query: 598 LCNFVYKILSN*LA 639 LC+ +YKI+S +A Sbjct: 475 LCSVLYKIISKIMA 488 >emb|CAN79574.1| hypothetical protein VITISV_017342 [Vitis vinifera] Length = 1367 Score = 77.4 bits (189), Expect = 3e-12 Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 17/215 (7%) Frame = +1 Query: 46 ALKVNNAQLDEEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELII 225 A K + + +EE F+ +KSR WL+EGD N+RFF+ ++I RN + +L+ N G Sbjct: 495 ARKAYKSWVIKEEIFWXQKSRELWLKEGDNNTRFFHRMANAHIRRNWLSKLKVN-GCWHS 553 Query: 226 DEDSSRAWATRFYSKMFQN------SSPNVSFQIPFNSK-------FIEENVHILLNHV- 363 +E++ R + +++Q S +SF NS+ F+EE V L + Sbjct: 554 EENNLRNSVVGAFQELYQEEEGWRPSVDGISFMRLDNSEAEGLENPFLEEVVLAALTDLG 613 Query: 364 -DKRQNL*FFSLQGIKLRARWI--WYGIFHLFLGYCGEECL*CSYRYFRHGKMLKDVNAT 534 DK F++ A W+ W + +G+ E + G+ +K +NAT Sbjct: 614 KDKAPGSDGFTM------AFWLFGWDVVKFEIMGFFRE--------FHERGRFVKSLNAT 659 Query: 535 LLCIIPKEENAKRLEEFKPIALCNFVYKILSN*LA 639 L ++PK+ A+ L++FKPI+L +YK+ + LA Sbjct: 660 FLVLVPKKGGAENLKDFKPISLVGSLYKLFAKVLA 694 >gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] Length = 1023 Score = 76.3 bits (186), Expect = 8e-12 Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%) Frame = +1 Query: 49 LKVNNAQLDEEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIID 228 +++ A +DEE+ +Y+K SR W++ GD NS++F++ ARN I+ L G+ + Sbjct: 173 IRLKEAYIDEEQYWYQK-SRSLWMKVGDNNSKYFHALTKQRRARNRIIGLHDENGKWFAE 231 Query: 229 EDSSRAWATRFYSKMFQNSSP-NVSFQIPFNSKFIEENVH---------------ILLNH 360 + + A ++ +F S+P N++ + I + ++ + L H Sbjct: 232 DKDVQHIAVSYFETLFNKSNPQNIAESLSEVKTLITDQINDFLTTPATEDEVRAALFLMH 291 Query: 361 VDKRQNL*FFSLQGIKLRARWIWYGIFHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLL 540 +K + + + W + LFL + + G K +N T + Sbjct: 292 PEKAPGP--DGMTALFFQKPWATIKMDMLFL----------VNSFLQDGVFDKQLNTTNI 339 Query: 541 CIIPKEENAKRLEEFKPIALCNFVYKILS 627 C+IPK E R+ E +PI+LCN YKI+S Sbjct: 340 CLIPKTERPTRMTELRPISLCNVGYKIIS 368 >gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana] Length = 1142 Score = 75.9 bits (185), Expect = 1e-11 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 13/206 (6%) Frame = +1 Query: 49 LKVNNAQLDEEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIID 228 L++ A DEE+ +Y+K SR W++ GD NS+FF++ ARN I L G I+ Sbjct: 107 LRLKEAYRDEEQYWYQK-SRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIE 165 Query: 229 EDSSRAWATRFYSKMFQNSSPNVSFQIPFNSKFIEENVHILLNHVDKRQNL*FFSLQGIK 408 +D + A ++ +F ++P V F+ E V I D+ +L + Sbjct: 166 DDDIQNIAVSYFQNLFTTANPQV-----FDEALGEVQVLI----TDRINDLLTADATECE 216 Query: 409 LRARWIWY---------GIFHLFL----GYCGEECL*CSYRYFRHGKMLKDVNATLLCII 549 +RA G+ LF + L + + G K +N T +C+I Sbjct: 217 VRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLI 276 Query: 550 PKEENAKRLEEFKPIALCNFVYKILS 627 PK E R+ E +PI+LCN YK++S Sbjct: 277 PKTERPTRMTELRPISLCNVGYKVIS 302 >gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] Length = 1161 Score = 73.6 bits (179), Expect = 5e-11 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 10/192 (5%) Frame = +1 Query: 82 ESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWATRF 261 ESF+R+KSR+ WL EGD N+RFF+ ++ ++ A N I L + G + + D + + Sbjct: 391 ESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAY 450 Query: 262 YSKMFQNSSPNVS-FQI-------PFN-SKFIEENVHILLNHVDKRQNL*FFSLQGIKLR 414 YS + S NV+ F + PF F+ + + + + Q L FS+ K Sbjct: 451 YSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVL--FSMPRNKAP 508 Query: 415 ARWIWYGIFHLFLGYCGEECL*CSYR-YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKP 591 + F + + + + R +F G + + NAT + +IPK A RL +F+P Sbjct: 509 GPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRP 568 Query: 592 IALCNFVYKILS 627 +A C +YK+++ Sbjct: 569 VACCTTIYKVIT 580 >dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 910 Score = 73.6 bits (179), Expect = 5e-11 Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 10/192 (5%) Frame = +1 Query: 82 ESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWATRF 261 ESF+R+KSR+ WL EGD N+RFF+ ++ ++ A N I L + G + + D + + Sbjct: 348 ESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAY 407 Query: 262 YSKMFQNSSPNVS-FQI-------PFN-SKFIEENVHILLNHVDKRQNL*FFSLQGIKLR 414 YS + S NV+ F + PF F+ + + + + Q L FS+ K Sbjct: 408 YSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVL--FSMPRNKAP 465 Query: 415 ARWIWYGIFHLFLGYCGEECL*CSYR-YFRHGKMLKDVNATLLCIIPKEENAKRLEEFKP 591 + F + + + + R +F G + + NAT + +IPK A RL +F+P Sbjct: 466 GPDGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRP 525 Query: 592 IALCNFVYKILS 627 +A C +YK+++ Sbjct: 526 VACCTTIYKVIT 537 >gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 42.57) [Arabidopsis thaliana] Length = 1662 Score = 71.2 bits (173), Expect = 2e-10 Identities = 51/222 (22%), Positives = 103/222 (46%), Gaps = 20/222 (9%) Frame = +1 Query: 22 MDRVQEAEALKVNNAQLD------EEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARN 183 M V E +++ Q + +EE ++++KSR W++EGDRN+ FF++ + + N Sbjct: 689 MSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVN 748 Query: 184 GIMELETNQGELIIDEDSSRAWATRFYSKMFQNSS------------PNVSFQI--PFNS 321 ++ ++ +G + + A F++K+++++ P V+ QI Sbjct: 749 RLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPIVTEQINDDLTK 808 Query: 322 KFIEENVHILLNHVDKRQNL*FFSLQGIKLRARWIWYGIFHLFLGYCGEECL*CSYRYFR 501 + ++ + H+ + L ++ W G + + +FR Sbjct: 809 DLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCW----------EIVGPDVIKEVKIFFR 858 Query: 502 HGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKILS 627 M + +N T +C+IPK N + L +++PIALCN +YKI+S Sbjct: 859 TSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIIS 900 >ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis thaliana] gi|332193872|gb|AEE31993.1| DNAse I-like superfamily protein [Arabidopsis thaliana] Length = 626 Score = 71.2 bits (173), Expect = 2e-10 Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 16/199 (8%) Frame = +1 Query: 82 ESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMELETNQGELIIDEDSSRAWATRF 261 ESFYR+KSR+ WL++GD N+RFF+ I +N A+N I L + + + + + Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491 Query: 262 YSKMFQNSSPNVSFQIPFNSKFIEENVHILLNHV----------DKRQNL*FFSLQGIK- 408 Y+ + + S ++ P + + I++ N DK F++ K Sbjct: 492 YTHLLGSDSDILT---PDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKA 548 Query: 409 -----LRARWIWYGIFHLFLGYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKR 573 A + W F + + +FR G +LK NAT + +IPK + Sbjct: 549 PGPDSFTAEFFWESWF-----VVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQ 603 Query: 574 LEEFKPIALCNFVYKILSN 630 L F+P++ C VYKI+++ Sbjct: 604 LSMFRPVSCCTVVYKIITD 622 >emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1| putative protein [Arabidopsis thaliana] Length = 1294 Score = 71.2 bits (173), Expect = 2e-10 Identities = 51/222 (22%), Positives = 103/222 (46%), Gaps = 20/222 (9%) Frame = +1 Query: 22 MDRVQEAEALKVNNAQLD------EEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARN 183 M V E +++ Q + +EE ++++KSR W++EGDRN+ FF++ + + N Sbjct: 669 MSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRFSVN 728 Query: 184 GIMELETNQGELIIDEDSSRAWATRFYSKMFQNSS------------PNVSFQI--PFNS 321 ++ ++ +G + + A F++K+++++ P V+ QI Sbjct: 729 RLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPIVTEQINDDLTK 788 Query: 322 KFIEENVHILLNHVDKRQNL*FFSLQGIKLRARWIWYGIFHLFLGYCGEECL*CSYRYFR 501 + ++ + H+ + L ++ W G + + +FR Sbjct: 789 DLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCW----------EIVGPDVIKEVKIFFR 838 Query: 502 HGKMLKDVNATLLCIIPKEENAKRLEEFKPIALCNFVYKILS 627 M + +N T +C+IPK N + L +++PIALCN +YKI+S Sbjct: 839 TSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIIS 880 >gb|AAB84340.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1094 Score = 71.2 bits (173), Expect = 2e-10 Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 7/195 (3%) Frame = +1 Query: 76 EEESFYRKKSRV*WLREGDRNSRFFYSSIASNIARNGIMEL-ETNQGELIIDEDSSRAWA 252 EEE F+R KSR W+ GD+NS+FF +++ +N N + L + N E ++ + + A Sbjct: 60 EEEDFWRLKSRDKWMVGGDKNSKFFQATVKANRVSNSLRFLVDENGNEQTVNREKGKI-A 118 Query: 253 TRFYSKMFQNSSPNVSFQI--PFNSKFIEENVHILLNHVDKRQNL*FFSLQGIKLRARWI 426 F+ +F +S P+ + FN + E+ L V++++ + ++ I + Sbjct: 119 VTFFEDLFSSSYPSSMDSVLEGFNKRVTEDMNQDLTKKVNEQEI--YKAVFSINAESAPG 176 Query: 427 WYGIFHLFL----GYCGEECL*CSYRYFRHGKMLKDVNATLLCIIPKEENAKRLEEFKPI 594 G LF + + +F+ G + +D N T LC+IPK R+ + +PI Sbjct: 177 PDGFTALFFQRQWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPKITKPARMADIRPI 236 Query: 595 ALCNFVYKILSN*LA 639 +LC+ +YKI+S L+ Sbjct: 237 SLCSVMYKIISKILS 251