BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00041143
         (591 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006836295.1| hypothetical protein AMTR_s00092p00018230 [A...   113   4e-23
ref|XP_007030408.1| Pentatricopeptide repeat superfamily protein...    84   3e-14
ref|XP_002521979.1| pentatricopeptide repeat-containing protein,...    82   8e-14
ref|XP_006487703.1| PREDICTED: pentatricopeptide repeat-containi...    79   9e-13
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu...    79   1e-12
ref|XP_006442666.1| hypothetical protein CICLE_v10019470mg [Citr...    78   2e-12
ref|XP_002325338.2| pentatricopeptide repeat-containing family p...    75   1e-11
ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-11
gb|EXB93168.1| hypothetical protein L484_024506 [Morus notabilis]      75   2e-11
ref|XP_006418483.1| hypothetical protein EUTSA_v10006939mg [Eutr...    74   2e-11
ref|XP_007207705.1| hypothetical protein PRUPE_ppa025110mg [Prun...    74   2e-11
ref|XP_004237158.1| PREDICTED: pentatricopeptide repeat-containi...    74   3e-11
ref|XP_006472504.1| PREDICTED: pentatricopeptide repeat-containi...    74   4e-11
ref|XP_006387304.1| hypothetical protein POPTR_1306s00200g, part...    74   4e-11
ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Sela...    74   4e-11
ref|XP_006858935.1| hypothetical protein AMTR_s00068p00078600 [A...    73   5e-11
gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]      73   7e-11
ref|XP_006645030.1| PREDICTED: pentatricopeptide repeat-containi...    73   7e-11
ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containi...    73   7e-11
ref|XP_006382765.1| hypothetical protein POPTR_0005s05210g [Popu...    72   9e-11

>ref|XP_006836295.1| hypothetical protein AMTR_s00092p00018230 [Amborella trichopoda]
           gi|548838813|gb|ERM99148.1| hypothetical protein
           AMTR_s00092p00018230 [Amborella trichopoda]
          Length = 498

 Score =  113 bits (282), Expect = 4e-23
 Identities = 58/117 (49%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
 Frame = +3

Query: 240 SPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTV 416
           S  T Q++  I K  P PN++ YT FIK LG  G   EA ELF  MK    +PD ISFT+
Sbjct: 46  STITAQIIAKILKISPSPNVIIYTKFIKKLGRLGYVDEAYELFIFMKLYQCKPDVISFTI 105

Query: 417 LIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQ 587
           LIQ LC S  +++A  L  EMP Y CKPD + YNIL+D     G+EE V +LW EM+
Sbjct: 106 LIQALCSSNRLNKARGLLHEMPTYSCKPDCVLYNILMDMYARSGNEEMVWQLWKEME 162


>ref|XP_007030408.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao] gi|508719013|gb|EOY10910.1| Pentatricopeptide
           repeat superfamily protein, putative [Theobroma cacao]
          Length = 595

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
 Frame = +3

Query: 210 LNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKK-S 386
           +N + K  +Y  A L V+ +I  H   PN +TY T I  L S GC  E  E+  IMK+ S
Sbjct: 318 VNFTCKRGKYEDAAL-VIYNIISHGMEPNAITYNTLIHSLSSHGCWDEVDEILAIMKETS 376

Query: 387 HEPDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGH-EECV 563
           H P  +++ +LI  LC+  +++RA++ F +M    C PDI+ YN L+  L + G  EE +
Sbjct: 377 HPPTVVTYNILINGLCKYGLLERAINFFDQMVSQNCSPDIVTYNTLLGALSKEGMVEEAL 436

Query: 564 QRLWY 578
           Q L +
Sbjct: 437 QLLQF 441


>ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538783|gb|EEF40383.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
 Frame = +3

Query: 180 PTLKNFQSRPLNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEAL 359
           P L  + S  +N + K  +Y  A L ++ ++  H   PN +TY T +  L S G   E  
Sbjct: 271 PDLVTYNSL-VNFTCKQGKYEDAAL-IIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVD 328

Query: 360 ELFDIMKK-SHEPDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKL 536
           E+  +MK+ SH P  +++  LI  LC+S +V+RA+D F +M Y  C PDI+ YN L   L
Sbjct: 329 EILTVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTL---L 385

Query: 537 GEVGHEEC 560
           G +  EEC
Sbjct: 386 GALCKEEC 393


>ref|XP_006487703.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like isoform X1 [Citrus sinensis]
           gi|568868940|ref|XP_006487704.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08610-like isoform X2 [Citrus sinensis]
           gi|568868942|ref|XP_006487705.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08610-like isoform X3 [Citrus sinensis]
          Length = 577

 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
 Frame = +3

Query: 177 SPTLKNFQSRPLNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEA 356
           SP +  + S  +N S K  +Y  A L V+ ++      PN +TY T +  LGS GC    
Sbjct: 289 SPDIVTYNSL-VNFSCKEGKYDDAVL-VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346

Query: 357 LELFDIMKK-SHEPDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDK 533
            ++ DIM + SH P   ++ +LI  LC+  +VDRA++ F +M    C+PDI+ YN ++  
Sbjct: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406

Query: 534 LGEVGH-EECVQRL 572
           L + G  +E +Q L
Sbjct: 407 LCKEGMLDEALQLL 420


>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
           gi|550337245|gb|EEE92232.2| hypothetical protein
           POPTR_0006s28060g [Populus trichocarpa]
          Length = 1115

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
 Frame = +3

Query: 180 PTLKNFQSRPLNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEAL 359
           P+LK F +  + S  +        + +L  +     RPNI TYT  I+ LG  G   EA 
Sbjct: 227 PSLKTFSALMVASGKRRN--IKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEA- 283

Query: 360 ELFDIMKKSHE----PDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILI 527
             + IMK+  +    PD +++TVLI  LC ++ +D A+ LF +M     KPD + Y  L+
Sbjct: 284 --YRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341

Query: 528 DKLGEVGHEECVQRLWYEMQS 590
           DK  + GH + V+++W EM++
Sbjct: 342 DKFSDCGHLDKVEKIWTEMEA 362



 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
 Frame = +3

Query: 288  RPNIVTYTTFIKFLGSSGCAAEALELFDIM-KKSHEPDAISFTVLIQILCESKMVDRALD 464
            RPN   Y   +   G  G    A E F  M K+   PD  S+T+L+ ILC +  VD AL 
Sbjct: 927  RPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALH 986

Query: 465  LFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQS 590
             F+++      PD++ YN++I+ LG     E    L++EMQ+
Sbjct: 987  YFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQN 1028



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
 Frame = +3

Query: 291 PNIVTYTTFIKFLGSSGCAAEALELFDIMK-KSHEPDAISFTVLIQILCESKMVDRALDL 467
           P +VTY   +  LG  G   +A++LF+ M      P+ I+F  L+  LC++  VD AL +
Sbjct: 577 PTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKM 636

Query: 468 FQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLW 575
           F +M    C+PD++ +N +I   G +   +    +W
Sbjct: 637 FYKMTTMNCRPDVLTFNTIIH--GFIKQNQIKNAIW 670



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
 Frame = +3

Query: 288  RPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQILCESKMVDRALD 464
            RP++ +YT  +  L  +G   +AL  F+ +K++  +PD +++ ++I  L  S+  + AL 
Sbjct: 962  RPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALS 1021

Query: 465  LFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQ 587
            LF EM      PD+  YN LI  LG VG  E   +++ E+Q
Sbjct: 1022 LFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQ 1062



 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +3

Query: 291 PNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQILCESKMVDRALDL 467
           PNIV     +  L   G   EA  +F+ +K S   PD++++ ++++   +   VD A+ L
Sbjct: 472 PNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKL 531

Query: 468 FQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQ 587
             EM   +C+PD+I  N LID L + G  E   +++  M+
Sbjct: 532 LSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRME 571


>ref|XP_006442666.1| hypothetical protein CICLE_v10019470mg [Citrus clementina]
           gi|567900358|ref|XP_006442667.1| hypothetical protein
           CICLE_v10019470mg [Citrus clementina]
           gi|557544928|gb|ESR55906.1| hypothetical protein
           CICLE_v10019470mg [Citrus clementina]
           gi|557544929|gb|ESR55907.1| hypothetical protein
           CICLE_v10019470mg [Citrus clementina]
          Length = 577

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
 Frame = +3

Query: 177 SPTLKNFQSRPLNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEA 356
           SP +  + S  +N S K  +Y  A L V+ ++      PN +TY T +  LGS GC    
Sbjct: 289 SPDIVTYNSL-VNFSCKQGKYDDAVL-VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346

Query: 357 LELFDIMKK-SHEPDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDK 533
            ++ DIM + SH P   ++ +LI  LC+  +VDRA++ F +M    C+PDI+ YN ++  
Sbjct: 347 DKILDIMNETSHTPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406

Query: 534 LGEVG 548
           L + G
Sbjct: 407 LCKEG 411


>ref|XP_002325338.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550316701|gb|EEE99719.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 443

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
 Frame = +3

Query: 180 PTLKNFQSRPLNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEAL 359
           P L  + S  +N + K  +Y  A L ++ +I  H   PN +TY + +  L S G   E  
Sbjct: 157 PDLVTYNSL-VNFASKEGKYEDAAL-IIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVD 214

Query: 360 ELFDIMKK-SHEPDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKL 536
           E+  IMKK SH P  +++ +LI  LC+  +V+RA++ F +M    C PDII YN L+  L
Sbjct: 215 EILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTAL 274

Query: 537 GEVG 548
            + G
Sbjct: 275 CKEG 278



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = +3

Query: 255 QVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELF-DIMKKSHEPDAISFTVLIQIL 431
           ++L  + K    P +VTY   I  L   G    A+  F  ++ ++  PD I++  L+  L
Sbjct: 215 EILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTAL 274

Query: 432 CESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEM 584
           C+  MVD AL +F  +    C P +I YN +ID L   G+ +   +L+ +M
Sbjct: 275 CKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQM 325


>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
 Frame = +3

Query: 288 RPNIVTYTTFIKFLGSSGCAAEALELFDIMK-KSHEPDAISFTVLIQILCESKMVDRALD 464
           RPNI TYT  I+ LG +G   +A  +   M+ +   PD +++TVLI  LC +  +D+A +
Sbjct: 259 RPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKE 318

Query: 465 LFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQS 590
           L+ +M     KPD++ Y  L+ K G  G  E V+R W EM++
Sbjct: 319 LYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEA 360



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = +3

Query: 291 PNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQILCESKMVDRALDL 467
           P +VTY   I  LG  G   +AL+LF  MK+S   P+ ++F  L+  LC++  VD AL +
Sbjct: 575 PTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKM 634

Query: 468 FQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQ 587
           F  M    C PD++ YN +I  L + G        +++M+
Sbjct: 635 FCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK 674



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
 Frame = +3

Query: 288  RPNIVTYTTFIKFLGSSGCAAEALELF-DIMKKSHEPDAISFTVLIQILCESKMVDRALD 464
            +PNI+T+   I  L  S    +AL+L+ +I+     P   ++  LI  L ++   + A+ 
Sbjct: 855  KPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMK 914

Query: 465  LFQEMPYYKCKPDIICYNILIDKLGEVGH 551
            +F+EMP Y+CKP+   YNILI+  G+ G+
Sbjct: 915  IFEEMPDYQCKPNCAIYNILINGFGKAGN 943



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
 Frame = +3

Query: 207  PLNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIM-KK 383
            PL   +     S   +++   +  ++ +PN   Y   I   G +G    A +LF  M K+
Sbjct: 898  PLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKE 957

Query: 384  SHEPDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEECV 563
               PD  S+T+L++ L  +  VD A+  F+E+      PD + YN++I+ LG+    E  
Sbjct: 958  GIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEA 1017

Query: 564  QRLWYEMQS 590
              L+ EM++
Sbjct: 1018 LSLFSEMKN 1026



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
 Frame = +3

Query: 270  IFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQILCESKM 446
            + K   RP++ +YT  ++ L  +G   +A+  F+ +K +  +PD +S+ ++I  L +S+ 
Sbjct: 954  MIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRR 1013

Query: 447  VDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQ 587
            ++ AL LF EM      P++  YN LI   G  G  +   +++ E+Q
Sbjct: 1014 LEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQ 1060


>gb|EXB93168.1| hypothetical protein L484_024506 [Morus notabilis]
          Length = 594

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 2/123 (1%)
 Frame = +3

Query: 210 LNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH 389
           +N + K  ++   TL V+ ++  H   PN VTY T +  L S+GC  E  E+ ++M ++ 
Sbjct: 314 VNFTCKQGKFEDTTL-VMHNLLSHGMEPNAVTYNTLLHSLCSNGCWDEVDEILNMMNRTL 372

Query: 390 EP-DAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGH-EECV 563
           +P   I++ +LI  LC+  ++DRA+D F +M    C PDI+ YN L+  + + G  +E +
Sbjct: 373 QPATVITYNILINGLCKFGLLDRAIDFFTQMVSENCSPDIVTYNTLLGPVCKEGMVDEAL 432

Query: 564 QRL 572
           Q L
Sbjct: 433 QLL 435



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 27/81 (33%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = +3

Query: 291 PNIVTYTTFIKFLGSSGCAAEALELF-DIMKKSHEPDAISFTVLIQILCESKMVDRALDL 467
           P+++TY T I+++  +G   +A+  + D ++K   P  +++T+LI ++C +  V+RA+++
Sbjct: 235 PDVITYNTIIRYMFDNGNFNQAVGFWKDQLRKGCPPYLVTYTILIDLVCRNLGVERAIEV 294

Query: 468 FQEMPYYKCKPDIICYNILID 530
            +EM    C PDII YN L++
Sbjct: 295 LEEMAVEGCYPDIITYNSLVN 315


>ref|XP_006418483.1| hypothetical protein EUTSA_v10006939mg [Eutrema salsugineum]
           gi|557096254|gb|ESQ36836.1| hypothetical protein
           EUTSA_v10006939mg [Eutrema salsugineum]
          Length = 720

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 7/143 (4%)
 Frame = +3

Query: 141 NFLPKLTKSRPRSPTLKNFQSRPLNSSVKTTQYSPATL-QVLTHIFKHEPR----PNIVT 305
           NFL  + K   RS      + R  NS +++  Y  A L Q    +F+   +    P+++T
Sbjct: 126 NFLFSIEK---RSNGCVQLEDRYFNSLIRS--YGNAGLFQESVKLFEAMKKMCISPSVLT 180

Query: 306 YTTFIKFLGSSGCAAEALELFDIMKKSH--EPDAISFTVLIQILCESKMVDRALDLFQEM 479
           + + +  L   G    AL++FD M++++   PD+ +F +LI  LC++ MVD A  +F++M
Sbjct: 181 FNSLLSILLKRGKTGMALDVFDEMRRTYGLTPDSYTFNILISGLCKNSMVDEAFRIFKDM 240

Query: 480 PYYKCKPDIICYNILIDKLGEVG 548
             YKC PD++ YN +ID L   G
Sbjct: 241 EPYKCSPDVVTYNTIIDGLCRAG 263


>ref|XP_007207705.1| hypothetical protein PRUPE_ppa025110mg [Prunus persica]
           gi|462403347|gb|EMJ08904.1| hypothetical protein
           PRUPE_ppa025110mg [Prunus persica]
          Length = 433

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +3

Query: 249 TLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSHE-PDAISFTVLIQ 425
           T  ++ ++  H  +PN +TY T +  L S GC  E  E+F IM ++ E P  +++ +LI 
Sbjct: 169 TALIIHNLLSHGLKPNAITYNTILHSLCSRGCWDEVDEIFTIMNETSESPTVVTYNILIN 228

Query: 426 ILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVG 548
            LC+  ++DRA++ F +M    C PDII YN L+  L   G
Sbjct: 229 GLCKFGLLDRAINFFTQMISQNCSPDIITYNTLLGALCREG 269


>ref|XP_004237158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Solanum lycopersicum]
          Length = 580

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
 Frame = +3

Query: 177 SPTLKNFQSRPLNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEA 356
           SP L  + S  +N S K   +  + L ++ ++  H   PN VTY T +    +  C    
Sbjct: 298 SPDLVTYNSM-VNFSCKQGNFEDSAL-LIYNLLSHGLEPNAVTYNTLLHSFSTYACWDGV 355

Query: 357 LELFDIMKKS-HEPDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDK 533
            E+  IM +S H P  +++ +LI  LC+  ++DRA+D F +M    C PDII YN L+  
Sbjct: 356 DEILSIMNESSHPPSVVTYNILINCLCKHGLLDRAIDFFTQMVSENCTPDIITYNTLLRA 415

Query: 534 L-GEVGHEECVQ 566
           L  E   EE +Q
Sbjct: 416 LCKEAMVEEAIQ 427


>ref|XP_006472504.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like isoform X1 [Citrus sinensis]
           gi|568836969|ref|XP_006472505.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18475-like isoform X2 [Citrus sinensis]
          Length = 521

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
 Frame = +3

Query: 291 PNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQILCESKMVDRALDL 467
           PN+  YTT +      G   EA E+FD MK  H +PD I +T LI   C +  VD AL+L
Sbjct: 307 PNVFNYTTLMNGFCKEGKLQEAKEVFDEMKNFHLKPDTIGYTTLINCFCRAGGVDEALEL 366

Query: 468 FQEMPYYKCKPDIICYNILIDKLGEVGHEE----CVQRLWYE 581
            +EM    CK DI+ +NI++  L   G  E     +++LWY+
Sbjct: 367 LKEMKERGCKADIVTFNIILGGLCREGRIEEALGMLEKLWYD 408



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
 Frame = +3

Query: 291 PNIVTYTTFIKFLGSSGCAAEALELFDIMKKSHE--PDAISFTVLIQILCESKMVDRALD 464
           PN++TY+T I  L  +G   EA+ELF+ M    +  PDA+++ VLI   C    VDRA  
Sbjct: 236 PNLITYSTLIDGLCKNGRFREAIELFEEMVSKDQILPDALTYNVLIDGFCHGGKVDRAKK 295

Query: 465 LFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQS 590
           + + M    C P++  Y  L++   + G  +  + ++ EM++
Sbjct: 296 IMEFMKNNGCNPNVFNYTTLMNGFCKEGKLQEAKEVFDEMKN 337


>ref|XP_006387304.1| hypothetical protein POPTR_1306s00200g, partial [Populus
           trichocarpa] gi|550306341|gb|ERP46218.1| hypothetical
           protein POPTR_1306s00200g, partial [Populus trichocarpa]
          Length = 525

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 35/96 (36%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
 Frame = +3

Query: 252 LQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELF-DIMKKSHEPDAISFTVLIQI 428
           + VL  +FK   +P+++T+TT +  L + G   EA+ LF +++++ HEP+ IS+T +I  
Sbjct: 65  VSVLGKMFKLGIQPDVITFTTLLNGLCNEGKIKEAVGLFNEMVRQGHEPNVISYTTVING 124

Query: 429 LCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKL 536
           LC++     A+ +F++M  + CKPD++ Y+I+ID L
Sbjct: 125 LCKTGNTSMAVHVFKKMEQHGCKPDVVTYSIIIDCL 160



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
 Frame = +3

Query: 291 PNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQILCESKMVDRALDL 467
           PN+++YTT I  L  +G  + A+ +F  M++   +PD ++++++I  LC+ ++V+ A++ 
Sbjct: 113 PNVISYTTVINGLCKTGNTSMAVHVFKKMEQHGCKPDVVTYSIIIDCLCKDRLVNDAMEF 172

Query: 468 FQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEM 584
             EM      P++I Y+ ++     +G      RL+ EM
Sbjct: 173 LSEMLDRGIPPNVITYSSIVHGFCNLGQLNEATRLFKEM 211


>ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
           gi|300153020|gb|EFJ19660.1| hypothetical protein
           SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
 Frame = +3

Query: 282 EPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSHE------PDAISFTVLIQILCESK 443
           E  PN++TY T +  L  +    EALELFD M+K +E      PD IS++ +I  LC+++
Sbjct: 175 ECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQ 234

Query: 444 MVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGH-EECVQRL 572
            VD+A + F+ M    C P+++ Y+ LID L +V    EC++ L
Sbjct: 235 RVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELL 278



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
 Frame = +3

Query: 210 LNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH 389
           +N   K  Q   A  ++L  + +   + +++ ++T I+ L   G   EALE F  M +  
Sbjct: 118 INGFCKAGQVDQA-FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC 176

Query: 390 EPDAISFTVLIQILCESKMVDRALDLFQEM-----PYYKCKPDIICYNILIDKL 536
            P+ I++  ++  LC++  +D AL+LF +M       + C+PD+I Y+ +ID L
Sbjct: 177 SPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDAL 230


>ref|XP_006858935.1| hypothetical protein AMTR_s00068p00078600 [Amborella trichopoda]
           gi|548863047|gb|ERN20402.1| hypothetical protein
           AMTR_s00068p00078600 [Amborella trichopoda]
          Length = 680

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 47/126 (37%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
 Frame = +3

Query: 210 LNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIM-KKS 386
           +N   KT     A L +   + +   +P+IVTY+T I  L   G A EAL LF+ M    
Sbjct: 202 INGLCKTNCVEEA-LDLFKEMGERGTQPSIVTYSTLIDGLSREGRAQEALALFEGMFHNG 260

Query: 387 HEPDAISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQ 566
             P+ ++++ LI +LC+   VD AL LF+E+    C+P++I YN LID L +VG      
Sbjct: 261 INPNIVTYSTLINMLCKLNNVDNALALFKEIGKRGCRPNVITYNTLIDGLRKVGRIREAM 320

Query: 567 RLWYEM 584
            L  EM
Sbjct: 321 ALLEEM 326



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
 Frame = +3

Query: 252 LQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQI 428
           L +   I K   RPN++TY T I  L   G   EA+ L + M ++  +PD  ++ +LI  
Sbjct: 285 LALFKEIGKRGCRPNVITYNTLIDGLRKVGRIREAMALLEEMYQNGLKPDVFTYNILIDG 344

Query: 429 LCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKL 536
           LC++  V+  L+L++EM   +C PDI+ YN LID L
Sbjct: 345 LCKANKVEGGLELWEEMWKRQCCPDIVTYNTLIDGL 380



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
 Frame = +3

Query: 252 LQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELF-DIMKKSHEPDAISFTVLIQI 428
           L +   +F +   PNIVTY+T I  L        AL LF +I K+   P+ I++  LI  
Sbjct: 250 LALFEGMFHNGINPNIVTYSTLINMLCKLNNVDNALALFKEIGKRGCRPNVITYNTLIDG 309

Query: 429 LCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEM 584
           L +   +  A+ L +EM     KPD+  YNILID L +    E    LW EM
Sbjct: 310 LRKVGRIREAMALLEEMYQNGLKPDVFTYNILIDGLCKANKVEGGLELWEEM 361



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
 Frame = +3

Query: 222 VKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPD 398
           ++ TQ++   + ++  +  H    N++  T  +K L   G  A A+ELF  M+ +    +
Sbjct: 138 IQRTQFALGVVGLIQKLGYHL---NVILLTVVMKGLCKEGRVARAMELFHSMENNKFSAN 194

Query: 399 AISFTVLIQILCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEE 557
            +++  LI  LC++  V+ ALDLF+EM     +P I+ Y+ LID L   G  +
Sbjct: 195 VVTYNTLINGLCKTNCVEEALDLFKEMGERGTQPSIVTYSTLIDGLSREGRAQ 247


>gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]
          Length = 1098

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
 Frame = +3

Query: 288 RPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSHE----PDAISFTVLIQILCESKMVDR 455
           RPNI T+T  I+ LG +G   EA   + I+K+  +    PD I++TVLI  LC +  +D 
Sbjct: 244 RPNIYTFTICIRVLGRAGKIDEA---YGILKRMDDEGCGPDVITYTVLIDALCNAGKLDN 300

Query: 456 ALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQS 590
           A  LF +M     KPD + Y  L+DKL + G  E V+ +W EM++
Sbjct: 301 ARALFVKMKASSHKPDQVTYITLLDKLSDCGDLEGVKEIWAEMEA 345



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = +3

Query: 288  RPNIVTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQILCESKMVDRALD 464
            RP++ +YT  +  L  +G   +AL  F+ +K S   PD++S+ ++I  L  S+ V+ AL 
Sbjct: 945  RPDLKSYTILVDCLCLAGRIDDALHYFEELKLSGLNPDSVSYNLMINALGRSRRVEEALS 1004

Query: 465  LFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQ 587
            L+ EM   +  PD+  YN LI  LG  G  E    ++ E+Q
Sbjct: 1005 LYDEMRSRRITPDLYTYNSLILNLGIAGMVEQAGSMYEELQ 1045



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
 Frame = +3

Query: 288  RPNIVTYTTFIKFLGSSGCAAEALELFDIM-KKSHEPDAISFTVLIQILCESKMVDRALD 464
            +PN   +   I   G +G    A  LF  M K+   PD  S+T+L+  LC +  +D AL 
Sbjct: 910  KPNCAIFNILINGFGKAGDVETACMLFKRMVKEGIRPDLKSYTILVDCLCLAGRIDDALH 969

Query: 465  LFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQS 590
             F+E+      PD + YN++I+ LG     E    L+ EM+S
Sbjct: 970  YFEELKLSGLNPDSVSYNLMINALGRSRRVEEALSLYDEMRS 1011


>ref|XP_006645030.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Oryza brachyantha]
          Length = 705

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
 Frame = +3

Query: 15  SKSTYPP-------LLQNLPSKHIYSLLKNIHFLSAKPPRGTHSDSKHLNFLPKLTKSRP 173
           ++  +PP       LL+ L +     L + ++ L     R   S+S  L  L   +++  
Sbjct: 41  TRPAFPPPQPLLFHLLRRLATSSPAHLPRLLNLLPRLRQRPRFSESAALVVLSAFSRAIM 100

Query: 174 RSPTLKNFQSRP---------------LNSSVKTTQYSPATL--QVLTH-IFKHEPRPNI 299
               L  F++ P               L++ V+  ++S A L    L+H  F     PN+
Sbjct: 101 PDAALDAFRALPSILGCNPGIRSHNALLDAYVRARRFSEADLFFASLSHGAFGRRLAPNL 160

Query: 300 VTYTTFIKFLGSSGCAAEALELFDIMKKSH-EPDAISFTVLIQILCESKMVDRALDLFQE 476
            TY   ++ L + G    A+ LFD +++    PD I+++ L+  L +   +D ALDL  E
Sbjct: 161 QTYNIILRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKHNRLDDALDLLDE 220

Query: 477 MPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEM 584
           MP Y+ +PD++CYN L+ +  + G  +   R+W ++
Sbjct: 221 MPRYRVQPDVVCYNALLGECFKAGEFKKTMRVWEQL 256



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 2/135 (1%)
 Frame = +3

Query: 177 SPTLKNFQSRPLNSSVKTTQYSPATLQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEA 356
           +PTL  + +  ++   K  +Y  A+  V   +  +   P+I TY + I+ L S      A
Sbjct: 508 APTLVTYNTL-IDGLCKAEKYQEAS-SVAREMVANGFTPDITTYGSLIRGLFSDKKIDAA 565

Query: 357 LELFD-IMKKSHEPDAISFTVLIQILCESKMVDRALDLFQEMPYYK-CKPDIICYNILID 530
           L +++ ++ K    D +   +LI  LC +  VD AL +F +M   K C P+++ YN L+D
Sbjct: 566 LSIWNQLLYKGLRADVMMHNILIHGLCSAGKVDEALHIFSDMKERKNCSPNLVTYNTLMD 625

Query: 531 KLGEVGHEECVQRLW 575
            L E G+ +    LW
Sbjct: 626 GLYETGYIDKAAALW 640


>ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Brachypodium distachyon]
          Length = 1102

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
 Frame = +3

Query: 258 VLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELFDIMK-KSHEPDAISFTVLIQILC 434
           +L  +  H  +PN+ +YT  I+ LG +G   EA ++   M+ +  +PD ++ TVLIQILC
Sbjct: 238 LLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILC 297

Query: 435 ESKMVDRALDLFQEMPYYKCKPDIICYNILIDKLGEVGHEECVQRLWYEMQS 590
           ++  V  A D+F +M     KPD + Y  L+DK G+ G    V  +W  M++
Sbjct: 298 DAGRVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKA 349


>ref|XP_006382765.1| hypothetical protein POPTR_0005s05210g [Populus trichocarpa]
           gi|550338133|gb|ERP60562.1| hypothetical protein
           POPTR_0005s05210g [Populus trichocarpa]
          Length = 525

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 34/96 (35%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
 Frame = +3

Query: 252 LQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELF-DIMKKSHEPDAISFTVLIQI 428
           + +L  + K   +PN++T+TT +  L + G   EA+ LF +++++ HEP+ IS+T +I  
Sbjct: 65  VSILGKMVKLGIQPNVITFTTLLNGLCNEGKIKEAVGLFNEMVRQGHEPNVISYTTVING 124

Query: 429 LCESKMVDRALDLFQEMPYYKCKPDIICYNILIDKL 536
           LC++     A+ +F++M  + CKPD++ Y+I+ID L
Sbjct: 125 LCKTGNTSMAVHVFKKMEQHGCKPDVVTYSIIIDCL 160



 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
 Frame = +3

Query: 252 LQVLTHIFKHEPRPNIVTYTTFIKFLGSSGCAAEALELF-DIMKKSHEPDAISFTVLIQI 428
           ++ L+ +      PN++TY++ +    + G   EA  L  +++ +   PD ++FT+L+  
Sbjct: 170 MEFLSEMLDRGIPPNVITYSSIVHGFCNLGQLNEATRLLKEMVGRDVMPDTVTFTILVDG 229

Query: 429 LCESKMVDRALDLFQEMPYYKCKPDIICYNILID 530
           LC+  MV  A  +F+ MP    +P+I  YN LID
Sbjct: 230 LCKEGMVSEAQRVFETMPEKGVEPNIYTYNALID 263