BLASTX nr result
ID: Akebia27_contig00040713
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00040713
(1125 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera] 89 5e-22
emb|CAN68550.1| hypothetical protein VITISV_027787 [Vitis vinifera] 90 8e-22
emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera] 87 1e-20
emb|CAA73798.1| reverse transcriptase [Beta vulgaris subsp. vulg... 91 2e-19
emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera] 81 3e-19
ref|XP_007201486.1| hypothetical protein PRUPE_ppa016462mg, part... 93 1e-18
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga... 88 2e-18
ref|XP_007214027.1| hypothetical protein PRUPE_ppa016677mg [Prun... 91 2e-18
ref|XP_007212886.1| hypothetical protein PRUPE_ppa021750mg, part... 91 4e-18
ref|XP_007202950.1| hypothetical protein PRUPE_ppa016504mg, part... 91 5e-18
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 97 2e-17
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 96 2e-17
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta... 96 3e-17
emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera] 82 3e-17
ref|XP_003633652.1| PREDICTED: protein ALWAYS EARLY 2-like [Viti... 74 5e-17
gb|AAD24652.1| putative non-LTR retroelement reverse transcripta... 95 6e-17
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 94 8e-17
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 93 2e-16
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 92 3e-16
emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera] 92 3e-16
>emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera]
Length = 1215
Score = 89.0 bits (219), Expect(2) = 5e-22
Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+KA GPDGF + F++ CWE ++ + + ++FF + N L LIPK G ED+
Sbjct: 517 DKAPGPDGFTVAFWQFCWEFVKEEIVDVFKEFFEDKSFAKSLNSTFLVLIPKKGGAEDLG 576
Query: 988 DLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQGVFVKERQILD 1122
D RPISL+ YK+++ +LAN +K V ++ L+Q FVK RQILD
Sbjct: 577 DFRPISLLGGVYKLLAKVLANRIKEVLDKVVSLDQNAFVKGRQILD 622
Score = 43.5 bits (101), Expect(2) = 5e-22
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVNGEWRVGEEEVPHGIVDFFSDLYSKNHA 692
NT F+ MAN R N + +K+NG W E EV G+V+ F L S++ +
Sbjct: 427 NTGFFHRMANAHRRNNSMDKIKINGRWLEEEREVREGVVNAFQQLLSEDQS 477
>emb|CAN68550.1| hypothetical protein VITISV_027787 [Vitis vinifera]
Length = 752
Score = 89.7 bits (221), Expect(2) = 8e-22
Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+KA GPDGF + F++ CWE ++ + + ++FF E N L LIPK G+ED+
Sbjct: 205 DKAPGPDGFTVAFWQFCWEFVKEEIVDVFKEFFEEKSFSKSLNSTFLVLIPKKGGVEDLG 264
Query: 988 DLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQGVFVKERQILD 1122
D RPISL+ YK+++ +LAN +K V ++ +Q FVK RQILD
Sbjct: 265 DFRPISLLGGVYKLLAKVLANRIKGVLDKVVSPDQNAFVKGRQILD 310
Score = 42.0 bits (97), Expect(2) = 8e-22
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVNGEWRVGEEEVPHGIVDFFSDLYSKNHA 692
NT F+ M N R N + +K+NG W E EV G+V+ F L S++ +
Sbjct: 115 NTGFFHRMTNAHRRNNSMEKIKINGRWLEEEREVREGVVNAFQQLLSEDQS 165
>emb|CAN82037.1| hypothetical protein VITISV_033902 [Vitis vinifera]
Length = 1109
Score = 87.4 bits (215), Expect(2) = 1e-20
Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = +1
Query: 736 GATWLVRKVV*RERSLEYHCVHDYNKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREA 915
G +W V R+RS + + +KA G DGFPI F++ CW++++ M + +F
Sbjct: 322 GCSWSGGGVFQRKRSFKALSDLNRDKAPGLDGFPIRFWQFCWDVVKEEIMGFLLEFHERG 381
Query: 916 FLDYGSN*LVLALIPKMLGIEDINDLRPISLVNTSYKIISTLLANML-KVPSTLIGLNQG 1092
N L LIPK G ED+ D RPISLV YK+++ +LAN L KV ++ Q
Sbjct: 382 RFVRSLNSTFLVLIPKKPGAEDLRDFRPISLVGGLYKLLAKVLANRLKKVVGKVVSSAQN 441
Query: 1093 VFVKERQILD 1122
FV+ RQILD
Sbjct: 442 AFVEGRQILD 451
Score = 40.0 bits (92), Expect(2) = 1e-20
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVNGEWRVGEEEVPHGIVDFFSD 671
NT F+ MAN R N +S +KV+G W E+E+ G+V F D
Sbjct: 265 NTGFFHKMANSHRRRNCLSKIKVDGVWLTEEQEIKRGVVRAFKD 308
>emb|CAA73798.1| reverse transcriptase [Beta vulgaris subsp. vulgaris]
Length = 507
Score = 91.3 bits (225), Expect(2) = 2e-19
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 802 DYNKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIED 981
D KA GPDGF +F K+ WE+I+ + +VEDF+ L +G N +ALIPK
Sbjct: 311 DAQKAPGPDGFNFKFIKSSWEVIKKDIYKIVEDFWASGSLPHGCNSAFIALIPKTQHPRG 370
Query: 982 INDLRPISLVNTSYKIISTLLANML-KVPSTLIGLNQGVFVKERQILDG 1125
N+ RPIS+V YKII+ +LA L +V LIG Q F+K RQILDG
Sbjct: 371 FNEFRPISMVGCLYKIIAKILARRLQRVMDHLIGPYQSSFIKGRQILDG 419
Score = 32.3 bits (72), Expect(2) = 2e-19
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVNGEWRVGEEEVPHGIVDFFSDLYSK 683
NT++F+ +A +R NH+ ++K G+ E+ V +F ++++
Sbjct: 223 NTRYFHTLATIRRHKNHLQYIKTEGKNISKPGEIKEEAVAYFQHIFAE 270
>emb|CAN77614.1| hypothetical protein VITISV_035196 [Vitis vinifera]
Length = 1522
Score = 81.3 bits (199), Expect(2) = 3e-19
Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+KA GP+GF + F++ CWE + + + ++F+ + N L LIPK G ED+
Sbjct: 760 DKAPGPBGFTVAFWQFCWEFXKEEIVDVFKEFYEDKSFAKSLNSTFLVLIPKKGGAEDLG 819
Query: 988 DLRPISLVNTSYKIISTLLANML-KVPSTLIGLNQGVFVKERQILD 1122
D RPISL+ YK+++ +L+N + KV ++ +Q FVK RQILD
Sbjct: 820 DFRPISLLXGVYKLLAKVLSNRIKKVLDKVVSPDQNAFVKGRQILD 865
Score = 41.6 bits (96), Expect(2) = 3e-19
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVNGEWRVGEEEVPHGIVDFFSDLYSKNHA 692
NT F+ MAN R N + +K+NG W E EV G+V+ F L S + +
Sbjct: 670 NTGFFHRMANAHRRNNSMDKIKINGRWLEEEREVREGVVNAFQCLLSDDQS 720
>ref|XP_007201486.1| hypothetical protein PRUPE_ppa016462mg, partial [Prunus persica]
gi|462396886|gb|EMJ02685.1| hypothetical protein
PRUPE_ppa016462mg, partial [Prunus persica]
Length = 983
Score = 93.2 bits (230), Expect(2) = 1e-18
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 2/130 (1%)
Frame = +1
Query: 739 ATWLVRKVV*RE-RSLEYHCVHDYNKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREA 915
A WL R E + + C D K+ GPDGF + F+++CWE+++ + M +++DFF
Sbjct: 313 ADWLERPFELEEVKKAVFDCGKD--KSLGPDGFSMSFFQSCWEVVKGDLMKVMQDFFHSG 370
Query: 916 FLDYGSN*LVLALIPKMLGIEDINDLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQG 1092
++ +N + LIPK + D RPISLV + YK+IS +LA+ L+ V I +QG
Sbjct: 371 IVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLASRLREVLGNTISQSQG 430
Query: 1093 VFVKERQILD 1122
FV++RQILD
Sbjct: 431 AFVQKRQILD 440
Score = 28.1 bits (61), Expect(2) = 1e-18
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVN--GEWRVGEEEVPHGIVDFFSDLYSKN 686
NTK F+ +AN + N+I L+V G V + + ++ FF LYS N
Sbjct: 244 NTKFFHRVANGARKRNYIEELEVEDLGVIEV-DANIEREVIRFFKGLYSSN 293
>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1381
Score = 88.2 bits (217), Expect(3) = 2e-18
Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Frame = +1
Query: 802 DYNKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIED 981
D KA GPDG+ F K W+II+++ +VE+F+ L GSN +ALI K E
Sbjct: 441 DPQKAPGPDGYNFRFIKDSWDIIKLDVYNIVENFWNSGSLPKGSNVAFIALIAKREVPEG 500
Query: 982 INDLRPISLVNTSYKIISTLLANML-KVPSTLIGLNQGVFVKERQILDG 1125
+ND RPIS+V YKII+ LLA L KV +LIG Q F+ RQILDG
Sbjct: 501 LNDFRPISMVGCIYKIIAKLLARRLQKVMDSLIGPYQSSFIAGRQILDG 549
Score = 28.5 bits (62), Expect(3) = 2e-18
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVNGEWRVGEEEVPHGIVDFFSDLYSKN 686
NTK+F+ +A+ R + N I L N + H V FF ++ ++
Sbjct: 353 NTKYFHTLASTRKKKNTIPALITNNGVVSDPAGIHHEAVSFFKSIFKED 401
Score = 23.5 bits (49), Expect(3) = 2e-18
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 665 FRFVF*EP-CTRPKQNHL*FDSISEEQRGWLERLFEEKEV 781
F+ +F E +RP N L F S+S EQ L F KEV
Sbjct: 394 FKSIFKEDFSSRPVFNGLQFRSLSCEQVSQLTEPFSHKEV 433
>ref|XP_007214027.1| hypothetical protein PRUPE_ppa016677mg [Prunus persica]
gi|462409892|gb|EMJ15226.1| hypothetical protein
PRUPE_ppa016677mg [Prunus persica]
Length = 1421
Score = 91.3 bits (225), Expect(2) = 2e-18
Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Frame = +1
Query: 739 ATWLVRKVV*RE-RSLEYHCVHDYNKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREA 915
A WL R E + + C D K+ GPDGF + F+++CWE+++ + M +++DFF+
Sbjct: 697 ADWLERPFDLEEVQKAVFDCGKD--KSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSG 754
Query: 916 FLDYGSN*LVLALIPKMLGIEDINDLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQG 1092
++ +N + LIPK + D RPISLV + YK+IS +LA+ L+ V I +QG
Sbjct: 755 IVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLASRLREVLGNTISQSQG 814
Query: 1093 VFVKERQILD 1122
FV++RQILD
Sbjct: 815 AFVQKRQILD 824
Score = 28.9 bits (63), Expect(2) = 2e-18
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVN--GEWRVGEEEVPHGIVDFFSDLYSKN 686
NTK F+ +AN + N+I L+V G V + + ++ FF LYS+N
Sbjct: 628 NTKFFHRVANGARKRNYIEKLEVEDLGVIEV-DANIEREVIRFFKGLYSRN 677
>ref|XP_007212886.1| hypothetical protein PRUPE_ppa021750mg, partial [Prunus persica]
gi|462408751|gb|EMJ14085.1| hypothetical protein
PRUPE_ppa021750mg, partial [Prunus persica]
Length = 922
Score = 91.3 bits (225), Expect(2) = 4e-18
Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Frame = +1
Query: 739 ATWLVRKVV*RE-RSLEYHCVHDYNKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREA 915
A WL R E + + C D K+ GPDGF + F+++CWE+++ + M +++DFF+
Sbjct: 164 ADWLERPFDLEEVQKAVFDCGKD--KSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSG 221
Query: 916 FLDYGSN*LVLALIPKMLGIEDINDLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQG 1092
++ +N + LIPK + D RPISLV + YK+IS +LA+ L+ V I +QG
Sbjct: 222 IVNGVTNETFICLIPKKANSVKVTDYRPISLVTSLYKVISKVLASRLREVLGNTISQSQG 281
Query: 1093 VFVKERQILD 1122
FV++RQILD
Sbjct: 282 AFVQKRQILD 291
Score = 28.1 bits (61), Expect(2) = 4e-18
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVN--GEWRVGEEEVPHGIVDFFSDLYSKN 686
NTK F+ +AN + N+I L+V G V + + ++ FF LYS N
Sbjct: 95 NTKFFHRVANGARKRNYIEKLEVEDLGVIEV-DANIEREVIRFFKGLYSSN 144
>ref|XP_007202950.1| hypothetical protein PRUPE_ppa016504mg, partial [Prunus persica]
gi|462398481|gb|EMJ04149.1| hypothetical protein
PRUPE_ppa016504mg, partial [Prunus persica]
Length = 1162
Score = 90.9 bits (224), Expect(2) = 5e-18
Identities = 51/130 (39%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Frame = +1
Query: 739 ATWLVRKVV*RE-RSLEYHCVHDYNKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREA 915
A WL R E + + C D K+ GPDGF + F+++CWE+++ + M +++DFF+
Sbjct: 415 ADWLERPFDLEEVQKAVFECGKD--KSPGPDGFSMSFFQSCWEVVKGDLMKVMQDFFQSG 472
Query: 916 FLDYGSN*LVLALIPKMLGIEDINDLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQG 1092
++ +N + LIPK + D RPISLV + YK+IS +LA+ L+ V I +QG
Sbjct: 473 IVNGVTNETFICLIPKKANSVKVTDNRPISLVTSLYKVISKVLASRLREVLGNTISQSQG 532
Query: 1093 VFVKERQILD 1122
FV++RQILD
Sbjct: 533 AFVQKRQILD 542
Score = 28.1 bits (61), Expect(2) = 5e-18
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVN--GEWRVGEEEVPHGIVDFFSDLYSKN 686
NTK F+ +AN + N+I L+V G V + + ++ FF LYS N
Sbjct: 346 NTKFFHRVANGARKRNYIEKLEVEDLGVIEV-DANIEREVIRFFKGLYSSN 395
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 96.7 bits (239), Expect = 2e-17
Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+K+ GPDGF EF+KA WEI+ F+ ++ FF + FL G N +LALIPK +++
Sbjct: 876 DKSPGPDGFTSEFFKATWEILGNEFILAIQSFFAKGFLPKGINTTILALIPKKKEAKEMK 935
Query: 988 DLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQGVFVKERQILD 1122
D RPIS N YK+IS ++AN LK VP I NQ FVK+R +++
Sbjct: 936 DYRPISCCNVIYKVISKIIANRLKLVPPKFIAGNQSAFVKDRLLIE 981
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 96.3 bits (238), Expect = 2e-17
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+K+ GPDG+ EFYKA W+II F V+ FF++ FL G N ++LALIPK L +++
Sbjct: 115 DKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMR 174
Query: 988 DLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQGVFVKERQILD 1122
D RPIS N YK+IS ++AN LK + I NQ FVK+R +++
Sbjct: 175 DYRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIE 220
>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1449
Score = 95.9 bits (237), Expect = 3e-17
Identities = 49/107 (45%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+K+ GPDG+ EFYK W+II F+ V+ FF + FL G N +LALIPK L +++
Sbjct: 883 DKSPGPDGYTSEFYKRAWDIIGAEFVLAVKSFFEKGFLPKGVNTTILALIPKKLEAKEMK 942
Query: 988 DLRPISLVNTSYKIISTLLANMLK--VPSTLIGLNQGVFVKERQILD 1122
D RPIS N YK+IS ++AN LK +P+ + G NQ FVK+R +++
Sbjct: 943 DYRPISCCNVIYKVISKIIANRLKHVLPNFIAG-NQSAFVKDRLLIE 988
>emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]
Length = 1190
Score = 82.0 bits (201), Expect(2) = 3e-17
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+KA GPDGF + F++ACW+ + + L ++ + + N L +IPK G ED+
Sbjct: 403 DKASGPDGFTLAFWQACWDFAKEEIVELFQELYDQKSFAKSLNATFLVIIPKKGGAEDLG 462
Query: 988 DLRPISLVNTSYKIISTLLANMLK-VPSTLIGLNQGVFVKERQILD 1122
+ RPISL+ YK+++ +LAN LK V ++ ++Q FV+ RQILD
Sbjct: 463 EFRPISLLGGLYKLMAKVLANRLKMVLDKVVSVDQNAFVRGRQILD 508
Score = 34.3 bits (77), Expect(2) = 3e-17
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVNGEWRVGEEEVPHGIVDFFSDLYSKNHALDQN 704
NT F+ MA+ R N + + +NGE V E+E+ GIV F + LD +
Sbjct: 325 NTGFFHKMASAHWRNNFLDRIIINGEELVEEQEMREGIVKAFQHQLREEPGLDHS 379
>ref|XP_003633652.1| PREDICTED: protein ALWAYS EARLY 2-like [Vitis vinifera]
Length = 1623
Score = 74.3 bits (181), Expect(2) = 5e-17
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+KA GPDGF + F+++CW+ ++ + + ++FF E N L LIPK G +D+
Sbjct: 205 DKAPGPDGFTVAFWQSCWDFVKEEIVDMFKEFFDEKSFAKSLNSTFLVLIPKKGGADDLG 264
Query: 988 DLRPISLVNTSYKIISTLLANMLK 1059
D RPISL+ YK+++ +LAN LK
Sbjct: 265 DFRPISLLGGLYKLLAKVLANRLK 288
Score = 41.2 bits (95), Expect(2) = 5e-17
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 540 NTKHFNCMANVRSRTNHISWLKVNGEWRVGEEEVPHGIVDFFSDLYSKNHA 692
NT F+ MAN R N + +K+NG W E+EV +V+ F L S+ A
Sbjct: 115 NTGFFHRMANAHRRNNSMEKIKINGRWLEEEQEVREEVVNAFQQLLSEKPA 165
>gb|AAD24652.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 977
Score = 94.7 bits (234), Expect = 6e-17
Identities = 49/107 (45%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+K+ GPDG+ EFYKA W+II F+ ++ FF + FL G N +LALIPK L ++
Sbjct: 583 DKSLGPDGYRTEFYKATWDIIGEEFVLAIKSFFEKGFLPKGVNSTILALIPKKLEEIEMK 642
Query: 988 DLRPISLVNTSYKIISTLLANMLK--VPSTLIGLNQGVFVKERQILD 1122
D RPIS N YK+IS ++AN LK +P+ + G NQ FV++R +L+
Sbjct: 643 DYRPISCCNVIYKVISKIIANRLKRLLPNFIAG-NQSAFVQDRLLLE 688
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 94.4 bits (233), Expect = 8e-17
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+K+ GPDG+ EFYK W II F+ ++ FF + FL G N +LALIPK +++
Sbjct: 356 DKSPGPDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMK 415
Query: 988 DLRPISLVNTSYKIISTLLANMLK--VPSTLIGLNQGVFVKERQILD 1122
D RPIS N YK+IS ++AN LK +P ++G NQ FVK+R +++
Sbjct: 416 DYRPISCCNVLYKVISKIIANRLKLVLPKFIVG-NQSAFVKDRLLIE 461
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 93.2 bits (230), Expect = 2e-16
Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+K+ GPDG+ EFYKA WEII + ++ FF + FL G N +LALIPK +I
Sbjct: 189 DKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIK 248
Query: 988 DLRPISLVNTSYKIISTLLANMLK--VPSTLIGLNQGVFVKERQILD 1122
D RPIS N YK IS +LAN LK +P ++G NQ FVK+R +++
Sbjct: 249 DYRPISCCNVLYKAISKILANRLKRILPKFIVG-NQSAFVKDRLLIE 294
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 92.4 bits (228), Expect = 3e-16
Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+K+ GPDG+ EF+KA WEII F V+ FF + FL G N +LALIPK ++
Sbjct: 468 DKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMK 527
Query: 988 DLRPISLVNTSYKIISTLLANMLK--VPSTLIGLNQGVFVKERQILD 1122
D RPIS N YK+IS ++AN LK +P + G NQ FVK+R +++
Sbjct: 528 DYRPISCCNVLYKVISKIIANRLKLVLPKFIAG-NQSAFVKDRLLIE 573
>emb|CAN79789.1| hypothetical protein VITISV_039779 [Vitis vinifera]
Length = 1566
Score = 92.4 bits (228), Expect = 3e-16
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Frame = +1
Query: 808 NKAFGPDGFPIEFYKACWEIIRVNFMFLVEDFFREAFLDYGSN*LVLALIPKMLGIEDIN 987
+KA GPDGFPI F++ CW+ ++ M L +DFF N L L+PK G ED+
Sbjct: 840 DKAPGPDGFPIAFWQFCWDFVKDEIMGLFKDFFERGKFVRSLNSTFLVLVPKKXGAEDLR 899
Query: 988 DLRPISLVNTSYKIISTLLANML-KVPSTLIGLNQGVFVKERQILD 1122
D RPISLV YKI++ +LAN L KV ++ Q FV+ RQILD
Sbjct: 900 DYRPISLVGGLYKILAKVLANRLKKVVGKVVSSAQNAFVEGRQILD 945