BLASTX nr result
ID: Akebia27_contig00040702
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00040702
(494 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005643590.1| hypothetical protein COCSUDRAFT_67947 [Cocco... 75 7e-12
ref|XP_005643589.1| chlorophyll a/b-binding protein [Coccomyxa s... 65 1e-08
ref|XP_005646347.1| chlorophyll a/b-binding protein [Coccomyxa s... 60 2e-07
ref|XP_006836916.1| hypothetical protein AMTR_s00099p00139960 [A... 59 7e-07
ref|XP_005644739.1| chlorophyll a/b-binding protein, partial [Co... 59 7e-07
gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotia... 59 9e-07
tpg|DAA05918.1| TPA_inf: chloroplast light-harvesting complex I ... 58 1e-06
gb|ABD37880.1| light-harvesting chlorophyll-a/b binding protein ... 58 1e-06
ref|XP_006397075.1| hypothetical protein EUTSA_v10028871mg [Eutr... 58 2e-06
gb|EPS71850.1| hypothetical protein M569_02908 [Genlisea aurea] 58 2e-06
ref|XP_006288402.1| hypothetical protein CARUB_v10001659mg [Caps... 58 2e-06
gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis... 57 2e-06
ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidops... 57 2e-06
ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago tr... 57 2e-06
ref|XP_002980072.1| light-harvesting complex [Selaginella moelle... 57 2e-06
ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arab... 57 2e-06
ref|XP_001752812.1| predicted protein [Physcomitrella patens] gi... 57 2e-06
ref|XP_006357455.1| PREDICTED: chlorophyll a-b binding protein C... 57 3e-06
ref|XP_004300672.1| PREDICTED: chlorophyll a-b binding protein C... 57 3e-06
gb|AAX95979.1| chlorophyll a/b-binding protein CP26 precursor - ... 57 3e-06
>ref|XP_005643590.1| hypothetical protein COCSUDRAFT_67947 [Coccomyxa subellipsoidea
C-169] gi|384245553|gb|EIE19046.1| hypothetical protein
COCSUDRAFT_67947 [Coccomyxa subellipsoidea C-169]
Length = 737
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/65 (56%), Positives = 45/65 (69%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKGQQVAAWLLSTGLALVFL 181
RLAMLA LGFW QA TGK PL+NL DHLA+P+ NNIL GQ+VAAWL+ + L +
Sbjct: 185 RLAMLANLGFWSQAAVTGKGPLQNLSDHLADPVNNNILATGAGQKVAAWLVGIVVLLGAV 244
Query: 182 EAGNT 196
E +
Sbjct: 245 EVARS 249
>ref|XP_005643589.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384245552|gb|EIE19045.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 172
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKGQQVAAWLLSTGL 166
RLAMLA LGFW QA TGK PL+NL DHLA+PL NN+LT K A W + G+
Sbjct: 92 RLAMLANLGFWSQAAVTGKGPLQNLSDHLADPLHNNVLTQGK----AGWYVFGGV 142
>ref|XP_005646347.1| chlorophyll a/b-binding protein [Coccomyxa subellipsoidea C-169]
gi|384248319|gb|EIE21803.1| chlorophyll a/b-binding
protein [Coccomyxa subellipsoidea C-169]
Length = 248
Score = 60.5 bits (145), Expect = 2e-07
Identities = 34/67 (50%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTY-QKGQQVAAWLLSTGLALVF 178
RLAMLA LGF QA+ TGK PLEN DHL +P G NI T +KG V A L+ + L
Sbjct: 168 RLAMLAALGFATQAYVTGKGPLENAVDHLRDPFGQNIFTQGEKGTAVVAIFLAFSVVLHL 227
Query: 179 LEAGNTA 199
E A
Sbjct: 228 AEGARQA 234
>ref|XP_006836916.1| hypothetical protein AMTR_s00099p00139960 [Amborella trichopoda]
gi|548839480|gb|ERM99769.1| hypothetical protein
AMTR_s00099p00139960 [Amborella trichopoda]
Length = 288
Score = 58.9 bits (141), Expect = 7e-07
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM A LGF++QA+ TG+ P+ENL HL++P GNN+LT +G
Sbjct: 238 RLAMFAMLGFFIQAYVTGEGPVENLTSHLSDPFGNNLLTVLQG 280
>ref|XP_005644739.1| chlorophyll a/b-binding protein, partial [Coccomyxa subellipsoidea
C-169] gi|384246706|gb|EIE20195.1| chlorophyll
a/b-binding protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 203
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKGQQVAAWLLSTGLALVFL 181
RLAMLA +GF QA TGK PLENL+DH+A+P NNI + G +V +++ L + L
Sbjct: 133 RLAMLAFIGFASQAANTGKGPLENLKDHIADPTHNNIFASKVGPEVTLAVIAITLTPIVL 192
Query: 182 EA 187
EA
Sbjct: 193 EA 194
>gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
Length = 285
Score = 58.5 bits (140), Expect = 9e-07
Identities = 26/43 (60%), Positives = 33/43 (76%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM A LGF++QA+ TGK P+ENL HL++P GNN+LT G
Sbjct: 235 RLAMFAMLGFFIQAYVTGKGPVENLAAHLSDPFGNNLLTVIAG 277
>tpg|DAA05918.1| TPA_inf: chloroplast light-harvesting complex I protein precursor
Lhca3 [Mesostigma viride]
Length = 278
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILT 118
RLAM+A LGF++QA ATG+ P +NL DHLA+P NNILT
Sbjct: 231 RLAMVATLGFFIQAMATGEGPFQNLTDHLADPFNNNILT 269
>gb|ABD37880.1| light-harvesting chlorophyll-a/b binding protein Lhca3 [Mesostigma
viride]
Length = 300
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILT 118
RLAM+A LGF++QA ATG+ P +NL DHLA+P NNILT
Sbjct: 253 RLAMVATLGFFIQAMATGEGPFQNLTDHLADPFNNNILT 291
>ref|XP_006397075.1| hypothetical protein EUTSA_v10028871mg [Eutrema salsugineum]
gi|557098092|gb|ESQ38528.1| hypothetical protein
EUTSA_v10028871mg [Eutrema salsugineum]
Length = 280
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM A LGF++QA+ TG+ P+ENL HL++P GNN+LT G
Sbjct: 230 RLAMFAMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVIAG 272
>gb|EPS71850.1| hypothetical protein M569_02908 [Genlisea aurea]
Length = 473
Score = 57.8 bits (138), Expect = 2e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILT 118
RLAM A LGF++QA+ TGK P++NL HL++P GNN+LT
Sbjct: 423 RLAMFAMLGFFIQAYVTGKGPVDNLASHLSDPFGNNLLT 461
>ref|XP_006288402.1| hypothetical protein CARUB_v10001659mg [Capsella rubella]
gi|482557108|gb|EOA21300.1| hypothetical protein
CARUB_v10001659mg [Capsella rubella]
Length = 281
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM A LGF++QA+ TG+ P+ENL HL++P GNN+LT G
Sbjct: 231 RLAMFAMLGFFIQAYVTGEGPVENLAQHLSDPFGNNLLTVIAG 273
>gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
Length = 280
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM A LGF++QA+ TG+ P+ENL HL++P GNN+LT G
Sbjct: 230 RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAG 272
>ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName:
Full=Chlorophyll a-b binding protein CP26,
chloroplastic; AltName: Full=LHCB5; AltName:
Full=LHCIIc; AltName: Full=Light-harvesting complex II
protein 5; Flags: Precursor
gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein
[Arabidopsis thaliana]
gi|11908106|gb|AAG41482.1|AF326900_1 putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|12642916|gb|AAK00400.1|AF339718_1 putative
chlorophyll a/b-binding protein [Arabidopsis thaliana]
gi|14190463|gb|AAK55712.1|AF380631_1
AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|15983446|gb|AAL11591.1|AF424597_1
AT4g10340/F24G24_140 [Arabidopsis thaliana]
gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding
protein-like [Arabidopsis thaliana]
gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding
protein-like [Arabidopsis thaliana]
gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140
[Arabidopsis thaliana] gi|332657469|gb|AEE82869.1|
chlorophyll a-b binding protein CP26 [Arabidopsis
thaliana]
Length = 280
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM A LGF++QA+ TG+ P+ENL HL++P GNN+LT G
Sbjct: 230 RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAG 272
>ref|XP_003618082.1| Chlorophyll a-b binding protein [Medicago truncatula]
gi|355519417|gb|AET01041.1| Chlorophyll a-b binding
protein [Medicago truncatula]
Length = 557
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQK----GQQVAAWLLSTGLA 169
RLAMLA LG+++QA TG P +NL DHLA+P+ NNILT K G+ +A +L + +
Sbjct: 234 RLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNILTSLKGNKEGKNMATQVLLSSSS 293
Query: 170 LVF 178
L F
Sbjct: 294 LTF 296
>ref|XP_002980072.1| light-harvesting complex [Selaginella moellendorffii]
gi|302811558|ref|XP_002987468.1| light-harvesting
complex [Selaginella moellendorffii]
gi|300144874|gb|EFJ11555.1| light-harvesting complex
[Selaginella moellendorffii] gi|300152299|gb|EFJ18942.1|
light-harvesting complex [Selaginella moellendorffii]
Length = 271
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM A LGF++QA+ATG+ P+ENL HL++P GNN+L+ G
Sbjct: 225 RLAMFAMLGFFIQAYATGEGPVENLTTHLSDPFGNNLLSVIAG 267
>ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
lyrata] gi|297318345|gb|EFH48767.1| hypothetical protein
ARALYDRAFT_489877 [Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM A LGF++QA+ TG+ P+ENL HL++P GNN+LT G
Sbjct: 230 RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAG 272
>ref|XP_001752812.1| predicted protein [Physcomitrella patens]
gi|168000420|ref|XP_001752914.1| predicted protein
[Physcomitrella patens] gi|162695975|gb|EDQ82316.1|
predicted protein [Physcomitrella patens]
gi|162696077|gb|EDQ82418.1| predicted protein
[Physcomitrella patens]
Length = 227
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM + LGF+VQA+ TG+ P+ENL HL++P GNN+LT +G
Sbjct: 177 RLAMFSMLGFFVQAYVTGEGPVENLSAHLSDPFGNNLLTVIQG 219
>ref|XP_006357455.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Solanum tuberosum]
Length = 285
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILT 118
RLAM + LGF++QA+ TGK P+ENL HL++P GNN+LT
Sbjct: 235 RLAMFSMLGFFIQAYVTGKGPVENLAAHLSDPFGNNLLT 273
>ref|XP_004300672.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 288
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM + LGF++QA+ TG+ P+ENL HL++P GNN+LT G
Sbjct: 238 RLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISG 280
>gb|AAX95979.1| chlorophyll a/b-binding protein CP26 precursor - maize [Oryza
sativa Japonica Group] gi|77549543|gb|ABA92340.1|
Chlorophyll A-B binding protein, expressed [Oryza sativa
Japonica Group]
Length = 225
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +2
Query: 2 RLAMLAQLGFWVQAWATGKSPLENLQDHLANPLGNNILTYQKG 130
RLAM + LGF++QA+ TG+ P+ENL HL++P GNN+LT G
Sbjct: 175 RLAMFSMLGFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISG 217