BLASTX nr result
ID: Akebia27_contig00040166
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00040166
(1077 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_004376507.1| photosystem II CP43 chlorophyll apoprotein [... 85 5e-14
ref|XP_002525592.1| conserved hypothetical protein [Ricinus comm... 84 1e-13
ref|YP_001837356.1| photosystem II 44 kDa protein [Guizotia abys... 83 2e-13
ref|YP_008474470.1| photosystem II CP43 chlorophyll apoprotein (... 82 4e-13
gb|ACA49207.1| photosystem II CP43 protein [Lygodium japonicum] 82 4e-13
sp|Q8WI20.1|PSBC_PSINU RecName: Full=Photosystem II CP43 chlorop... 82 5e-13
gb|ACA49177.1| photosystem II CP43 protein [Tmesipteris elongata] 82 5e-13
ref|NP_569625.2| photosystem II 44 kDa protein [Psilotum nudum] ... 82 5e-13
gb|AHL69534.1| PsbC (chloroplast) [Taxus mairei] 81 7e-13
gb|AHE41564.1| photosystem II CP43 chlorophyll apoprotein, parti... 81 7e-13
ref|XP_006466161.1| PREDICTED: LOW QUALITY PROTEIN: photosystem ... 81 7e-13
ref|YP_008854590.1| photosystem II CP43 chlorophyll apoprotein [... 81 7e-13
ref|YP_008474559.1| photosystem II CP43 chlorophyll apoprotein (... 81 7e-13
gb|AGE93366.1| photosystem II CP43 chlorophyll apoprotein [Alpin... 81 7e-13
ref|YP_007475700.1| photosystem II CP43 chlorophyll apoprotein [... 81 7e-13
ref|YP_007474800.1| photosystem II 44 kDa protein (chloroplast) ... 81 7e-13
ref|NP_848056.3| photosystem II 44 kDa protein [Adiantum capillu... 81 7e-13
gb|AAP29388.2| photosystem II 44 kDa protein, partial (chloropla... 81 7e-13
gb|AAY86078.1| putative PsbC [Lagarostrobos franklinii] 81 7e-13
gb|AAX09389.1| PsbC [Duckeella adolphii] 81 7e-13
>ref|YP_004376507.1| photosystem II CP43 chlorophyll apoprotein [Ptilidium pulcherrimum]
gi|302024755|gb|ADK89601.1| photosystem II CP43
chlorophyll apoprotein [Ptilidium pulcherrimum]
Length = 473
Score = 85.1 bits (209), Expect = 5e-14
Identities = 50/102 (49%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP---LIFPFQ 529
G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP ++ F
Sbjct: 51 GAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEIVDTFP 110
Query: 528 SIRSLPFHPFCPDLLSSSTIL----WPRKYIPLLPSFFGTGW 415
S H +L IL W R + + SFFG W
Sbjct: 111 YFVSGVLHLISSAVLGFGGILPCTDWTRNFRRIF-SFFGYVW 151
>ref|XP_002525592.1| conserved hypothetical protein [Ricinus communis]
gi|223535113|gb|EEF36794.1| conserved hypothetical
protein [Ricinus communis]
Length = 137
Score = 83.6 bits (205), Expect = 1e-13
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV HFVLEK +YEQGLI LPHL+TLGWGVGP
Sbjct: 51 GAHVAHAGLIVFWAGAMNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGP 101
>ref|YP_001837356.1| photosystem II 44 kDa protein [Guizotia abyssinica]
gi|221222595|sp|B2LMI9.1|PSBC_GUIAB RecName:
Full=Photosystem II CP43 chlorophyll apoprotein;
AltName: Full=PSII 43 kDa protein; AltName:
Full=Photosystem II 44 kDa reaction center protein;
AltName: Full=Protein CP-43; AltName: Full=Protein P6;
Flags: Precursor gi|179366252|gb|ACB86523.1| photosystem
II CP43 chlorophyll apoprotein [Guizotia abyssinica]
Length = 473
Score = 83.2 bits (204), Expect = 2e-13
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ LA AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 51 GAHVAHAGLIVFLAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGP 101
>ref|YP_008474470.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Lygodium
japonicum] gi|474452424|gb|AGI51412.1| photosystem II
CP43 chlorophyll apoprotein (chloroplast) [Lygodium
japonicum]
Length = 487
Score = 82.0 bits (201), Expect = 4e-13
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = -1
Query: 726 LNNCQPLCSGVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
L N G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 56 LTNLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVSEKPMYEQGLILLPHLATLGWGVGP 115
>gb|ACA49207.1| photosystem II CP43 protein [Lygodium japonicum]
Length = 418
Score = 82.0 bits (201), Expect = 4e-13
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = -1
Query: 726 LNNCQPLCSGVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
L N G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 42 LTNLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVSEKPMYEQGLILLPHLATLGWGVGP 101
>sp|Q8WI20.1|PSBC_PSINU RecName: Full=Photosystem II CP43 chlorophyll apoprotein; AltName:
Full=PSII 43 kDa protein; AltName: Full=Photosystem II
44 kDa reaction center protein; AltName: Full=Protein
CP-43; AltName: Full=Protein P6; Flags: Precursor
gi|18389460|dbj|BAB84212.1| PSII 43kD protein [Psilotum
nudum]
Length = 461
Score = 81.6 bits (200), Expect = 5e-13
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = -1
Query: 726 LNNCQPLCSGVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
L N G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 30 LTNLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGP 89
>gb|ACA49177.1| photosystem II CP43 protein [Tmesipteris elongata]
Length = 382
Score = 81.6 bits (200), Expect = 5e-13
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = -1
Query: 726 LNNCQPLCSGVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
L N G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 42 LTNLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGP 101
>ref|NP_569625.2| photosystem II 44 kDa protein [Psilotum nudum]
gi|441018013|gb|AGC26789.1| photosystem II CP43
chlorophyll apoprotein (chloroplast) [Psilotum nudum]
Length = 473
Score = 81.6 bits (200), Expect = 5e-13
Identities = 39/60 (65%), Positives = 44/60 (73%)
Frame = -1
Query: 726 LNNCQPLCSGVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
L N G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 42 LTNLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGP 101
>gb|AHL69534.1| PsbC (chloroplast) [Taxus mairei]
Length = 476
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 54 GAHVAHAGLIVFWAGAMNLFEVAHFVSEKPMYEQGLILLPHLATLGWGVGP 104
>gb|AHE41564.1| photosystem II CP43 chlorophyll apoprotein, partial (chloroplast)
[Myriophyllum verticillatum]
Length = 440
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV+HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 33 GAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMYEQGLILLPHLATLGWGVGP 83
>ref|XP_006466161.1| PREDICTED: LOW QUALITY PROTEIN: photosystem II CP43 chlorophyll
apoprotein-like [Citrus sinensis]
Length = 276
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV HFVLEK +YE GLI LPHL+TLGWGVGP
Sbjct: 51 GTHVAHAGLIVFWAGAMNLFEVAHFVLEKPMYEXGLILLPHLATLGWGVGP 101
>ref|YP_008854590.1| photosystem II CP43 chlorophyll apoprotein [Curcuma roscoeana]
gi|557637497|gb|AHA13092.1| photosystem II CP43
chlorophyll apoprotein [Curcuma roscoeana]
Length = 473
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV+HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 51 GAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMYEQGLILLPHLATLGWGVGP 101
>ref|YP_008474559.1| photosystem II CP43 chlorophyll apoprotein (chloroplast) [Marsilea
crenata] gi|474452515|gb|AGI51502.1| photosystem II CP43
chlorophyll apoprotein (chloroplast) [Marsilea crenata]
Length = 487
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 65 GAHVAHAGLIVFWAGAMNLFEVAHFVSEKPMYEQGLILLPHLATLGWGVGP 115
>gb|AGE93366.1| photosystem II CP43 chlorophyll apoprotein [Alpinia zerumbet]
Length = 473
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV+HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 51 GAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMYEQGLILLPHLATLGWGVGP 101
>ref|YP_007475700.1| photosystem II CP43 chlorophyll apoprotein [Zingiber spectabile]
gi|449326180|gb|AGE92765.1| photosystem II CP43
chlorophyll apoprotein [Zingiber spectabile]
Length = 473
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV+HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 51 GAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMYEQGLILLPHLATLGWGVGP 101
>ref|YP_007474800.1| photosystem II 44 kDa protein (chloroplast) [Taxus mairei]
gi|372863278|gb|AEX99349.1| photosystem II 44 kDa
protein (chloroplast) [Taxus mairei]
gi|372863355|gb|AEX99425.1| photosystem II 44 kDa
protein (chloroplast) [Taxus mairei]
gi|372863519|gb|AEX99587.1| photosystem II 44 kDa
protein (chloroplast) [Taxus mairei]
Length = 473
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 51 GAHVAHAGLIVFWAGAMNLFEVAHFVSEKPMYEQGLILLPHLATLGWGVGP 101
>ref|NP_848056.3| photosystem II 44 kDa protein [Adiantum capillus-veneris]
Length = 461
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 39 GAHVAHAGLIVFWAGAMNLFEVAHFVSEKPMYEQGLILLPHLATLGWGVGP 89
>gb|AAP29388.2| photosystem II 44 kDa protein, partial (chloroplast) [Adiantum
capillus-veneris]
Length = 473
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 51 GAHVAHAGLIVFWAGAMNLFEVAHFVSEKPMYEQGLILLPHLATLGWGVGP 101
>gb|AAY86078.1| putative PsbC [Lagarostrobos franklinii]
Length = 96
Score = 81.3 bits (199), Expect = 7e-13
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLI+ A AMNLFEV+HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 10 GAHVAHAGLIVFWAGAMNLFEVSHFVPEKPMYEQGLILLPHLATLGWGVGP 60
>gb|AAX09389.1| PsbC [Duckeella adolphii]
Length = 407
Score = 81.3 bits (199), Expect = 7e-13
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -1
Query: 699 GVHIANVGLIILLARAMNLFEVTHFVLEKLIYEQGLISLPHLSTLGWGVGP 547
G H+A+ GLII A AMNLFEV HFV EK +YEQGLI LPHL+TLGWGVGP
Sbjct: 51 GAHVAHAGLIIFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGP 101