BLASTX nr result

ID: Akebia27_contig00040056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00040056
         (360 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat...    96   7e-18
emb|CBI36364.3| unnamed protein product [Vitis vinifera]               96   7e-18
ref|XP_006828456.1| hypothetical protein AMTR_s00060p00130100 [A...    66   4e-09
gb|EPS71808.1| hypothetical protein M569_02948, partial [Genlise...    59   7e-07
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
 Frame = -2

Query: 344 FNCHLNDINGHYIRHHLXXXXXXXXXXXSANLYKTNSTLTDLKTHGEESSKSTPTHLHIP 165
           F   LN  N HY RH              A+   T +T+  LK +G +S K T  H    
Sbjct: 9   FQPSLNHFNCHYSRHFFLLPNPNSKSFS-AHFGHTTTTIK-LKFNGPDSPKPTSIHTKPA 66

Query: 164 SNLSS--YSSLIQDCIDSNSFELGKSIHARMVSNGFTPDTFLQTKILMLYARAGGL 3
           S+++   YSSLIQDCIDSNSF+ GKSIH +M+SNG+ PD +L TKILMLYAR+G L
Sbjct: 67  SDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL 122


>emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 56/116 (48%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
 Frame = -2

Query: 344 FNCHLNDINGHYIRHHLXXXXXXXXXXXSANLYKTNSTLTDLKTHGEESSKSTPTHLHIP 165
           F   LN  N HY RH              A+   T +T+  LK +G +S K T  H    
Sbjct: 9   FQPSLNHFNCHYSRHFFLLPNPNSKSFS-AHFGHTTTTIK-LKFNGPDSPKPTSIHTKPA 66

Query: 164 SNLSS--YSSLIQDCIDSNSFELGKSIHARMVSNGFTPDTFLQTKILMLYARAGGL 3
           S+++   YSSLIQDCIDSNSF+ GKSIH +M+SNG+ PD +L TKILMLYAR+G L
Sbjct: 67  SDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL 122


>ref|XP_006828456.1| hypothetical protein AMTR_s00060p00130100 [Amborella trichopoda]
           gi|548833204|gb|ERM95872.1| hypothetical protein
           AMTR_s00060p00130100 [Amborella trichopoda]
          Length = 745

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = -2

Query: 239 NSTLTDLKTHGEE----SSKSTPTHLHIPSNLSSYSSLIQDCIDSNSFELGKSIHARMVS 72
           N  L  L T G+     S  S    ++ P   S+Y+ LIQ CIDSN  E G+ + A M+S
Sbjct: 62  NERLNLLCTQGQWPQAISLLSANPKVNSPVYSSTYACLIQYCIDSNCIEKGQIVQAHMIS 121

Query: 71  NGFTPDTFLQTKILMLYARAGGL 3
           N F PDTFLQTK++ML AR G +
Sbjct: 122 NDFEPDTFLQTKLIMLQARCGNV 144


>gb|EPS71808.1| hypothetical protein M569_02948, partial [Genlisea aurea]
          Length = 440

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/50 (50%), Positives = 39/50 (78%)
 Frame = -2

Query: 152 SYSSLIQDCIDSNSFELGKSIHARMVSNGFTPDTFLQTKILMLYARAGGL 3
           +YS L+Q+CI+   ++ G+ IH++MV  GFTPD +L+ K+L+LYA+AG L
Sbjct: 52  TYSLLLQECINHKEYKRGRRIHSQMVIVGFTPDEYLKIKLLILYAKAGDL 101


>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
 Frame = -2

Query: 233 TLTDLKTHGEESSKSTP--THLHIPSNLSSY---SSLIQDCIDSNSFELGKSIHARMVSN 69
           T TDL+     ++ S+P  ++ HI S+ +SY   +S++Q C+ S S   G+ +H R++ +
Sbjct: 32  TATDLQLTNAAAAASSPPSSNSHIASSPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVS 91

Query: 68  GFTPDTFLQTKILMLYARAG 9
           G  PDT L TK++ LYA  G
Sbjct: 92  GLGPDTVLATKLVDLYAACG 111


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