BLASTX nr result
ID: Akebia27_contig00040040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia27_contig00040040
(839 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 72 3e-10
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 69 3e-09
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 65 2e-08
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ... 65 2e-08
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 63 5e-08
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis] 64 5e-08
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 64 5e-08
gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii] 62 3e-07
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc... 62 4e-07
gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 59 2e-06
gb|EXB53610.1| putative alpha-ketoglutarate-dependent dioxygenas... 57 9e-06
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 71.6 bits (174), Expect = 3e-10
Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 9/164 (5%)
Frame = +1
Query: 181 YPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLGCVIYG*GRIGL*VREE-VNAKLEL* 354
+P+TVGLHQ S L F LVMD H + C+++ + + +E VNAKL L
Sbjct: 359 FPITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLW 418
Query: 355 RDKL*TR--CFKSRTKTEF--AMQS**GHANG*G--LGQDSCNGNPQNDQFCYLGLTIH- 513
R+ L ++ C SR+KTE+ S G N G +G P++D+F YLG +
Sbjct: 419 REVLESKGLCL-SRSKTEYMECKFSANGSQNELGVRIGDQEI---PKSDRFRYLGSILQK 474
Query: 514 SGRKIKNIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMTFCKKTI 645
+G ++++HRI+AGW+K +S++ VLC ++ P+KLK F + I
Sbjct: 475 NGELDEDLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAI 518
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 68.6 bits (166), Expect = 3e-09
Identities = 59/193 (30%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Frame = +1
Query: 115 YICFLSYLYKFQLCSI---SYKINGYPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLG 282
YI + +Y + S+ + +P+ +GLHQ S L F LVMD +G
Sbjct: 198 YITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPW 257
Query: 283 CVIYG*GRIGL*-VREEVNAKLEL*RDKL*TRCFK-SRTKTEFAMQS**GHANG*GLGQD 456
C+++ + + R VN KLEL R L ++ F+ SRTKTE+ M G
Sbjct: 258 CMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMMC---------GFSTT 308
Query: 457 SCNGN---------PQNDQFCYLGLTIHSGRKI-KNIDHRIRAGWIK*RSSARVLCYQQ* 606
C P+ D F YLG + I ++++HRI+AGW+K R ++ +LC ++
Sbjct: 309 RCEEEEVSLDGQVVPRKDTFWYLGSLLQEDGGIDEDVNHRIKAGWMKWRQASGILCDKRV 368
Query: 607 PIKLKMTFCKKTI 645
P KLK F + +
Sbjct: 369 PQKLKGKFYRTVV 381
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 65.5 bits (158), Expect = 2e-08
Identities = 60/186 (32%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Frame = +1
Query: 115 YICFLSYLYKFQLCSISYK---INGYPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLG 282
YI + +Y + S+ + +P+ +GLHQ S L F LVMD +G
Sbjct: 248 YITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPW 307
Query: 283 CVIYG*GRIGL*-VREEVNAKLEL*RDKL*TRCFK-SRTKTEFAMQS**GHANG*GLGQD 456
C+++ + + R VN KLEL R L ++ F+ SRTKTE+ +
Sbjct: 308 CMLFADDVVLVDDSRTGVNRKLELWRQILESKGFRLSRTKTEYMKCGFSTTTPEEEEEEV 367
Query: 457 SCNGN--PQNDQFCYLGLTIHSGRKI-KNIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMT 627
S +G PQ D F YLG + I ++++HRI+AGW+K R ++ +LC ++ P KLK
Sbjct: 368 SLDGQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGK 427
Query: 628 FCKKTI 645
F + I
Sbjct: 428 FYRTAI 433
>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
jockey-like [Brachypodium distachyon]
Length = 307
Score = 65.5 bits (158), Expect = 2e-08
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Frame = +1
Query: 181 YPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLGCVIYG*GRIGL*-VREEVNAKLEL* 354
+P+ +GLHQ S L F LVMD +G C+++ + + R VN KLEL
Sbjct: 13 FPIKIGLHQGSALSPCLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELW 72
Query: 355 RDKL*TRCFK-SRTKTEFAMQS**GHANG*GLGQDSCNGN--PQNDQFCYLGLTIHSGRK 525
R L ++ F+ SRTKTE+ + S +G PQ D F YLG +
Sbjct: 73 RQTLESKGFRLSRTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGD 132
Query: 526 I-KNIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMTFCKKTI 645
I ++++HRI+AGW+K R ++ +LC ++ P KLK F + I
Sbjct: 133 IDEDVNHRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTAI 173
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 62.8 bits (151), Expect(2) = 5e-08
Identities = 52/159 (32%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Frame = +1
Query: 181 YPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLGCVIYG*GRIGL*V-REEVNAKLEL* 354
+P+T+GLHQ S L F L++D + + C+++ + L REE+N +LE
Sbjct: 84 FPITIGLHQGSTLSPYLFTLILDVLTEQIQEIAPRCMLFADDIVLLGESREELNERLETW 143
Query: 355 RDKL*TRCFK-SRTKTEFAMQS**GHANG*GLGQDSCNGNPQNDQFCYLGLTIHSGRKIK 531
R L T F+ SR+K+E+ + + PQ +F YLG I +I+
Sbjct: 144 RRALETHGFRLSRSKSEYMECQFNKRRVSNSEVKIGDHIIPQVTRFKYLGSVIQDDGEIE 203
Query: 532 -NIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMTFCKKTI 645
+++HRI+AGW+K R ++ VLC + PIKLK F + +
Sbjct: 204 GDVNHRIQAGWMKWRKASGVLCDAKVPIKLKGKFYRTAV 242
Score = 21.6 bits (44), Expect(2) = 5e-08
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 657 LYGA*CLVTMKQHVQKGRVPGARML 731
LYG C QH K V RML
Sbjct: 247 LYGTECWAVKSQHENKVGVAEMRML 271
>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
Length = 670
Score = 64.3 bits (155), Expect = 5e-08
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Frame = +1
Query: 181 YPVTVGLHQYSVLVGNFV-LVMDG*ISHFKGSSLGCVIYG*GRIGL*V--REEVNAKLEL 351
+P+ +GLHQ S L + +VMD + C+ + G I L RE VN KLEL
Sbjct: 368 FPIRIGLHQGSALSPYLITIVMDELTREIQDRVPWCMFFA-GDIVLVDEHREGVNRKLEL 426
Query: 352 *RDKL*TRCFK-SRTKTEFAMQS**GHAN-G*GLGQDSCNGNPQNDQFCYLGLTI-HSGR 522
+ L T+ FK SRTKTE+ +N G+ D +F YLG + + G
Sbjct: 427 WKQTLETKGFKLSRTKTEYMHCRFSNSSNQSDGISLDGVELGASR-KFRYLGSIVQYEGD 485
Query: 523 KIKNIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMTFCKKTI 645
++I+HRI+AGW+K ++ VLC + PIKLK F + I
Sbjct: 486 IEEDIEHRIKAGWVKWKNVTGVLCDVEMPIKLKGKFYRTVI 526
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 64.3 bits (155), Expect = 5e-08
Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 5/160 (3%)
Frame = +1
Query: 181 YPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLGCVIYG*GRIGL*V-REEVNAKLEL* 354
+P+T+GLHQ S L F LV+D H + + C+++ + + REEVN +LE
Sbjct: 337 FPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGRLETW 396
Query: 355 RDKL*TRCFK-SRTKTEFAMQS**GHANG*GLG-QDSCNGNPQNDQFCYLGLTIHSGRKI 528
R L F+ SR+KT++ + G + L + + PQ +F YLG + + +I
Sbjct: 397 RQALEAYGFRLSRSKTKYMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGEI 456
Query: 529 K-NIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMTFCKKTI 645
+ ++ HRI+AGW+K R ++ VLC ++ P+KL F + +
Sbjct: 457 EADVSHRIQAGWLKWRRASSVLCDKKVPLKLTGKFYRTAV 496
>gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii]
Length = 571
Score = 62.0 bits (149), Expect = 3e-07
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Frame = +1
Query: 181 YPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLGCVIYG*GRIGL*-VREEVNAKLEL* 354
+P+ +GLHQ S L F LVMD +G C+++ + + R N KLEL
Sbjct: 238 FPIKIGLHQGSALSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGANRKLELW 297
Query: 355 RDKL*TRCFK-SRTKTEFAMQS**GHANG*GLGQDSCNGN---------PQNDQFCYLGL 504
R L ++ F+ SRTKTE+ M G C P+ D F YLG
Sbjct: 298 RQTLESKGFRLSRTKTEYMMC---------GFSTTRCEEEEVSLDGQVVPKKDTFRYLGS 348
Query: 505 TIHSGRKI-KNIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMTFCKKTI 645
+ I ++++HR++AGW+K R ++ +LC ++ KLK F + I
Sbjct: 349 MLQEDGGIDEDVNHRVKAGWMKWRQASGILCDKRVRQKLKGKFYRTRI 396
>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
Length = 1134
Score = 61.6 bits (148), Expect = 4e-07
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Frame = +1
Query: 115 YICFLSYLYKFQLCSI---SYKINGYPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLG 282
YI + +Y + S+ + +P+ +GLHQ S L F L+MD +G
Sbjct: 482 YITLIKDMYDNAVTSVRTSDIDTDDFPIKIGLHQGSALSPYLFALLMDEVTRDIQGDIPW 541
Query: 283 CVIYG*GRIGL*-VREEVNAKLEL*RDKL*TRCFK-SRTKTEFAMQS**GHANG*GLGQD 456
C+++ + + R VN KLEL R L ++ + SRTKTE+ M G + +
Sbjct: 542 CMLFADDVVLVDDSRTGVNRKLELWRQTLESKGLRLSRTKTEYMMC---GFSTTRCEEEV 598
Query: 457 SCNGN--PQNDQFCYLGLTIHSGRKI-KNIDHRIRAGWIK*RSSARVLC 594
S +G PQ D F YLG + I ++++HRI+AGW+K R ++ +LC
Sbjct: 599 SLDGQVVPQKDTFRYLGSMLQEDGGIDEDVNHRIKAGWMKWRQASGILC 647
>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
Length = 868
Score = 59.3 bits (142), Expect = 2e-06
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Frame = +1
Query: 181 YPVTVGLHQYSVLVGN-FVLVMDG*ISHFKGSSLGCVIYG*GRIGL*-VREEVNAKLEL* 354
+PV +GLHQ SVL F LVMD + + C+++ + + R+ VNA+LE+
Sbjct: 399 FPVEIGLHQGSVLSPFLFALVMDELTRSIQETVPWCMLFADDIVLIDETRDRVNARLEVW 458
Query: 355 RDKL*TRCFK-SRTKTEFAMQS**GHANG*GLGQDSCNGN------PQNDQFCYLGLTIH 513
R L ++ F+ SRTKTE+ G GL + P+ + F YLG I
Sbjct: 459 RQTLESKGFRLSRTKTEYL-----GCKFSDGLDETDVEVRLAAQVIPKKESFRYLGAVIQ 513
Query: 514 -SGRKIKNIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMTFCKKTI 645
SG ++ HR+ A W+K R ++ VLC ++ KLK F + +
Sbjct: 514 GSGDIDDDVTHRVGAAWMKWRLASGVLCDKKISPKLKGKFYRVVV 558
>gb|EXB53610.1| putative alpha-ketoglutarate-dependent dioxygenase [Morus
notabilis]
Length = 317
Score = 57.0 bits (136), Expect = 9e-06
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Frame = +1
Query: 322 REEVNAKLEL*RDKL*TRCFK-SRTKTEFAMQS**GHAN-G*GLGQDSCNGNPQNDQFCY 495
RE VN KLEL R L + FK SRTK E+ +N G+ D G + +F Y
Sbjct: 14 REGVNCKLELWRQTLEMKGFKLSRTKNEYMHCRFSNSSNQSDGISLDGV-GIGASRKFRY 72
Query: 496 LGLTI-HSGRKIKNIDHRIRAGWIK*RSSARVLCYQQ*PIKLKMTFCKKTI 645
LG + H G ++I HRI+A W+K +++ RV+C + PIKLK F + I
Sbjct: 73 LGSIVQHEGDIEEDIQHRIKAWWVKWKNATRVICDGKMPIKLKGKFYRTVI 123