BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00039593
         (531 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]      62   8e-08
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    57   2e-06
gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not...    56   6e-06

>gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]
          Length = 747

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 22/132 (16%)
 Frame = +2

Query: 17  IVFIESEKAYDKVPRELFGGYW-IEKG-VWCRYIDIINDLYEGLVTRVSC*WYD------ 172
           +VFI+ EKAYDK+P+   G +W +EK  V  +YI +I D+Y+ ++T V     D      
Sbjct: 23  MVFIDLEKAYDKIPQN--GMWWALEKHKVPTKYITLIKDMYDNVLTSVRTSDVDTDDFLI 80

Query: 173 --------------NMCVCLLFADDFVLVDEIVGGIIAKLEL*KDSFKVRYSKINRTKKK 310
                         ++  C+LF DD VLVD+   G+  KLEL + + + +  +++RTK +
Sbjct: 81  KDRTASGVTRDIHEDIPWCMLFVDDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRTKTE 140

Query: 311 YMQI*ASLTNKE 346
           YM    S T  E
Sbjct: 141 YMMCGFSTTRCE 152


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 34/135 (25%)
 Frame = +2

Query: 17  IVFIESEKAYDKVPRELFGGYWIEKGVWCRYIDIINDLYEGLVTRV-------------- 154
           +VFI+ EKAYD+V R++      +KGV   YI  I D+YEG  T V              
Sbjct: 304 MVFIDLEKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITV 363

Query: 155 ------SC*WY--------------DNMCVCLLFADDFVLVDEIVGGIIAKLEL*KDSFK 274
                 S   Y              D++  C+LFA D VL+DE   G+ AKL L ++  +
Sbjct: 364 GLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLE 423

Query: 275 VRYSKINRTKKKYMQ 319
            +   ++R+K +YM+
Sbjct: 424 SKGLCLSRSKTEYME 438


>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 588

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +2

Query: 14  FIVFIESEKAYDKVPRELFGGYWIEKGVWCRYIDIINDLYEGLVTRV 154
           +IVFI+ EKAYD+VPRE+      +KGV  RYI +I D+Y+G+VT V
Sbjct: 307 YIVFIDLEKAYDRVPREVLWWVLEKKGVHVRYIKVIKDMYDGVVTSV 353