BLASTX nr result

ID: Akebia27_contig00039540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00039540
         (339 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518475.1| hypothetical protein RCOM_0904330 [Ricinus c...    62   6e-08
ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854...    60   2e-07
ref|XP_003528686.1| PREDICTED: uncharacterized protein LOC100791...    58   2e-06

>ref|XP_002518475.1| hypothetical protein RCOM_0904330 [Ricinus communis]
           gi|223542320|gb|EEF43862.1| hypothetical protein
           RCOM_0904330 [Ricinus communis]
          Length = 223

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 19/88 (21%)
 Frame = +2

Query: 131 RTNREEDFDEEDVWGSVMEKTDISPNLRNSKD----STPKC----LTTDSRMTSR----- 271
           R+ R+EDF+EED+W  V E+ D SP +R SKD    S+P      L +  RM  R     
Sbjct: 19  RSMRDEDFEEEDIWSVVKEREDSSPKIRKSKDNYCSSSPSSSAWRLHSAPRMIPRANIVS 78

Query: 272 ------DKSSTHEVMGLQQSSSPVNIPD 337
                   +STHE   +QQSS+PVNIPD
Sbjct: 79  PTSAGVPATSTHEAKAVQQSSAPVNIPD 106


>ref|XP_003632958.1| PREDICTED: uncharacterized protein LOC100854465 [Vitis vinifera]
          Length = 190

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
 Frame = +2

Query: 110 NKVSNDGRTNREEDFDEEDVWGSVMEKTDISPNLRNSKDSTPKCLTTDSRMTSR------ 271
           N     GR+ R+EDFDEEDVW  V ++ D SP +R SKD +    ++ S    R      
Sbjct: 10  NSSGGGGRSMRDEDFDEEDVWAVVKDREDSSPIMRKSKDYSSGSSSSSSSSAWRLPTAPR 69

Query: 272 -----DKSSTHEVMGLQQSSSPVNIPD 337
                + + +HE   +Q SS+P+NIPD
Sbjct: 70  GIRRGNNTPSHEAKLVQHSSAPMNIPD 96


>ref|XP_003528686.1| PREDICTED: uncharacterized protein LOC100791504 isoform X1 [Glycine
           max] gi|571467926|ref|XP_006584080.1| PREDICTED:
           uncharacterized protein LOC100791504 isoform X2 [Glycine
           max]
          Length = 189

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 13/97 (13%)
 Frame = +2

Query: 86  MEETNGFFNKVSN-DGRTNREEDFDEEDVWGSVM--EKTDISPNLRNSKDSTPK----CL 244
           M + NGF NK S   G + R EDFDE DVWG  M  E+  +SP LR SK+S+       L
Sbjct: 1   MADWNGFLNKSSGFGGGSMRNEDFDEGDVWGVAMERERNFLSPKLRVSKESSGSSSAWLL 60

Query: 245 TTDSRMTSRDKSSTHEVMG------LQQSSSPVNIPD 337
            T  R   R  S+T   +       +Q+SS+P++IPD
Sbjct: 61  PTSPRKIPRTNSTTPNSLESDSSNVVQRSSAPMDIPD 97


Top