BLASTX nr result

ID: Akebia27_contig00038901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia27_contig00038901
         (427 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_005648338.1| chloroplast ATP synthase subunit II [Coccomy...    65   1e-08
ref|XP_005844070.1| hypothetical protein CHLNCDRAFT_32746 [Chlor...    58   1e-06

>ref|XP_005648338.1| chloroplast ATP synthase subunit II [Coccomyxa subellipsoidea
           C-169] gi|384250314|gb|EIE23794.1| chloroplast ATP
           synthase subunit II [Coccomyxa subellipsoidea C-169]
          Length = 212

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = -2

Query: 426 KIDKELETALANLDREKEEALKDLDAQVGKLSGEILARVLPEGVKL 289
           KIDKEL +ALA LD+EK+ AL DLD+QV +L+ ++LARVLPEGVKL
Sbjct: 167 KIDKELASALAVLDKEKKAALSDLDSQVDRLAADVLARVLPEGVKL 212


>ref|XP_005844070.1| hypothetical protein CHLNCDRAFT_32746 [Chlorella variabilis]
           gi|307103710|gb|EFN51968.1| hypothetical protein
           CHLNCDRAFT_32746 [Chlorella variabilis]
          Length = 209

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 29/46 (63%), Positives = 35/46 (76%)
 Frame = -2

Query: 426 KIDKELETALANLDREKEEALKDLDAQVGKLSGEILARVLPEGVKL 289
           K+D EL  ALA L+ EK  A+K LDAQV KLS +IL RVLPEGV++
Sbjct: 164 KVDAELSRALATLEAEKAAAMKGLDAQVDKLSADILGRVLPEGVRV 209


Top